View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19495_low_22 (Length: 309)
Name: NF19495_low_22
Description: NF19495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19495_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 4213611 - 4213906
Alignment:
| Q |
1 |
tgtggtctcatatttgtgtgaagccaaccaagtggcggatggcttagctaatatcggcttgtctcttgttaggtccactagaatgttctattttgttctg |
100 |
Q |
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| T |
4213611 |
tgtggtctcatatttgtgtgaagccaaccaagtggcggatggcttagctaatatcggcttgtctcttgttaggtccactagaatgttctattttgttctg |
4213710 |
T |
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| Q |
101 |
cattttatttctacgctgatctctcagctattcagttcccccttggtttttagttttccttgttttggcgtttagccctctcttttaacaccacaaaaat |
200 |
Q |
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| T |
4213711 |
cattttatttctacgctgatctctcagctgttcagttcccccttggtttttagttttccttgttttggcgtttagccctctcttttaacaccacaaaaat |
4213810 |
T |
|
| Q |
201 |
attg-taattctttttcatttttggttatcaaaaggaaaatttagaataatacttatcttaatcaaagggggaaaaggtgagtttatgtataatat |
295 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
4213811 |
attgctaattctttttcatttttggttatcaaaaggaaaatttagaattatacttatcttaatcaaagggggaaaaggtgggtttatgtataatat |
4213906 |
T |
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