View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19495_low_34 (Length: 238)

Name: NF19495_low_34
Description: NF19495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19495_low_34
NF19495_low_34
[»] chr1 (39 HSPs)
chr1 (1-218)||(27523003-27523220)
chr1 (78-169)||(44690818-44690909)
chr1 (1-171)||(25463776-25463946)
chr1 (1-175)||(40215088-40215262)
chr1 (1-174)||(44094798-44094970)
chr1 (1-172)||(19015504-19015675)
chr1 (1-173)||(36966501-36966673)
chr1 (80-173)||(33786424-33786516)
chr1 (1-171)||(6883587-6883757)
chr1 (80-171)||(32000061-32000151)
chr1 (1-173)||(41876235-41876407)
chr1 (1-173)||(51737605-51737777)
chr1 (78-171)||(9910086-9910178)
chr1 (1-171)||(3559717-3559887)
chr1 (81-173)||(20304923-20305014)
chr1 (1-171)||(37821629-37821799)
chr1 (92-167)||(16045784-16045859)
chr1 (92-167)||(40214992-40215067)
chr1 (100-170)||(52064373-52064443)
chr1 (80-169)||(40273888-40273976)
chr1 (78-174)||(18404626-18404721)
chr1 (92-167)||(44094702-44094777)
chr1 (94-171)||(19722894-19722970)
chr1 (100-168)||(33786629-33786696)
chr1 (92-167)||(19015408-19015483)
chr1 (92-167)||(25463680-25463755)
chr1 (92-167)||(25973418-25973492)
chr1 (92-167)||(36966694-36966769)
chr1 (92-167)||(37821820-37821895)
chr1 (1-60)||(44690935-44690994)
chr1 (92-167)||(44691015-44691090)
chr1 (78-171)||(25973585-25973677)
chr1 (77-133)||(52329452-52329508)
chr1 (100-167)||(3559621-3559688)
chr1 (92-167)||(6883491-6883566)
chr1 (78-173)||(10167577-10167672)
chr1 (92-167)||(18404446-18404521)
chr1 (1-60)||(18404542-18404601)
chr1 (92-159)||(40273714-40273781)
[»] chr8 (62 HSPs)
chr8 (1-171)||(24844655-24844824)
chr8 (1-169)||(20091598-20091766)
chr8 (1-169)||(34665482-34665649)
chr8 (75-168)||(3890412-3890505)
chr8 (1-172)||(37985850-37986020)
chr8 (75-169)||(37132477-37132571)
chr8 (1-173)||(1645757-1645930)
chr8 (1-171)||(17841645-17841815)
chr8 (1-171)||(30055617-30055786)
chr8 (1-172)||(15187660-15187831)
chr8 (1-172)||(26041907-26042078)
chr8 (1-172)||(40779923-40780094)
chr8 (1-171)||(6108028-6108198)
chr8 (83-172)||(30834849-30834938)
chr8 (70-143)||(41819590-41819663)
chr8 (92-167)||(27782103-27782178)
chr8 (92-167)||(30835033-30835107)
chr8 (82-173)||(31347569-31347659)
chr8 (92-167)||(32064749-32064824)
chr8 (1-172)||(32064845-32065017)
chr8 (92-167)||(34665386-34665461)
chr8 (92-167)||(42755028-42755103)
chr8 (78-172)||(1503637-1503730)
chr8 (78-171)||(10044526-10044618)
chr8 (1-160)||(35353141-35353300)
chr8 (1-171)||(3596836-3597006)
chr8 (78-170)||(14129037-14129128)
chr8 (1-171)||(25581034-25581204)
chr8 (14-132)||(8453947-8454065)
chr8 (92-167)||(17841836-17841911)
chr8 (92-167)||(20091787-20091862)
chr8 (78-169)||(24211169-24211259)
chr8 (92-167)||(31347768-31347843)
chr8 (95-162)||(38016980-38017047)
chr8 (92-167)||(39772787-39772862)
chr8 (92-167)||(40780115-40780190)
chr8 (92-167)||(41819764-41819839)
chr8 (92-161)||(7021988-7022057)
chr8 (80-173)||(7022159-7022251)
chr8 (1-171)||(42754837-42755007)
chr8 (92-167)||(1645951-1646026)
chr8 (112-159)||(1886625-1886672)
chr8 (92-167)||(6108219-6108294)
chr8 (92-167)||(14128868-14128943)
chr8 (92-167)||(15187564-15187639)
chr8 (1-60)||(24211459-24211518)
chr8 (100-167)||(24211547-24211614)
chr8 (100-167)||(32393862-32393929)
chr8 (92-167)||(35353045-35353120)
chr8 (92-167)||(37986041-37986116)
chr8 (93-167)||(26042103-26042177)
chr8 (14-169)||(38017047-38017201)
chr8 (92-143)||(3597027-3597078)
chr8 (92-143)||(3817916-3817967)
chr8 (1-60)||(3890523-3890582)
chr8 (92-167)||(8453838-8453913)
chr8 (1-60)||(10044443-10044502)
chr8 (92-143)||(15972863-15972914)
chr8 (1-60)||(27835359-27835418)
chr8 (92-167)||(27835439-27835514)
chr8 (100-167)||(37132652-37132719)
chr8 (1-60)||(41819684-41819743)
[»] chr7 (30 HSPs)
chr7 (1-169)||(20009895-20010063)
chr7 (1-171)||(24395072-24395241)
chr7 (1-173)||(3962079-3962250)
chr7 (1-172)||(42696183-42696355)
chr7 (1-172)||(45637812-45637982)
chr7 (1-169)||(4974532-4974700)
chr7 (70-159)||(29737314-29737403)
chr7 (78-171)||(34483016-34483108)
chr7 (1-172)||(42611911-42612082)
chr7 (1-172)||(48880721-48880892)
chr7 (92-167)||(4974721-4974796)
chr7 (92-167)||(42611815-42611890)
chr7 (92-167)||(45637716-45637791)
chr7 (92-167)||(15329277-15329352)
chr7 (78-173)||(15577640-15577734)
chr7 (100-167)||(15577844-15577911)
chr7 (92-167)||(48880913-48880988)
chr7 (80-170)||(37476876-37476965)
chr7 (80-173)||(18037157-18037249)
chr7 (78-173)||(15329452-15329546)
chr7 (100-167)||(18036982-18037049)
chr7 (88-171)||(25167651-25167733)
chr7 (1-60)||(25167756-25167815)
chr7 (92-167)||(34482839-34482914)
chr7 (92-167)||(35444562-35444637)
chr7 (78-172)||(35445575-35445668)
chr7 (117-171)||(36790271-36790325)
chr7 (100-167)||(3961983-3962050)
chr7 (100-167)||(36790460-36790527)
chr7 (78-171)||(35876422-35876514)
[»] chr3 (53 HSPs)
chr3 (70-171)||(26612916-26613017)
chr3 (70-171)||(47738281-47738382)
chr3 (1-175)||(3137205-3137379)
chr3 (75-174)||(40328006-40328105)
chr3 (1-169)||(33145812-33145980)
chr3 (1-173)||(22426138-22426309)
chr3 (75-171)||(24343724-24343820)
chr3 (70-162)||(33839705-33839797)
chr3 (77-173)||(36864825-36864921)
chr3 (1-171)||(37522153-37522323)
chr3 (70-170)||(46919064-46919164)
chr3 (1-171)||(19650695-19650864)
chr3 (25-171)||(30385525-30385670)
chr3 (78-170)||(8320378-8320469)
chr3 (1-173)||(33113893-33114066)
chr3 (1-174)||(3456164-3456337)
chr3 (78-175)||(6042055-6042151)
chr3 (78-175)||(34482679-34482775)
chr3 (78-175)||(37216844-37216940)
chr3 (1-171)||(3574321-3574491)
chr3 (92-167)||(9797015-9797090)
chr3 (80-174)||(8361831-8361924)
chr3 (1-171)||(3089517-3089689)
chr3 (92-167)||(3574513-3574588)
chr3 (92-167)||(6041888-6041963)
chr3 (80-171)||(9796824-9796914)
chr3 (92-167)||(33113797-33113872)
chr3 (70-169)||(42921295-42921394)
chr3 (75-156)||(41883031-41883112)
chr3 (100-172)||(41224434-41224505)
chr3 (92-167)||(2754721-2754796)
chr3 (92-167)||(3137400-3137475)
chr3 (92-167)||(3456068-3456143)
chr3 (92-167)||(11347272-11347347)
chr3 (92-167)||(19650886-19650961)
chr3 (92-167)||(22426330-22426405)
chr3 (1-60)||(30385111-30385170)
chr3 (100-167)||(37217047-37217114)
chr3 (1-60)||(40327925-40327984)
chr3 (92-167)||(48160909-48160984)
chr3 (92-141)||(8362031-8362080)
chr3 (100-167)||(8320578-8320645)
chr3 (1-60)||(24343647-24343706)
chr3 (100-167)||(30385015-30385082)
chr3 (92-167)||(33839535-33839610)
chr3 (92-167)||(34482896-34482971)
chr3 (100-143)||(41883217-41883260)
chr3 (1-60)||(42297454-42297513)
chr3 (92-159)||(47738117-47738184)
chr3 (1-60)||(47738205-47738264)
chr3 (78-173)||(48161084-48161178)
chr3 (1-57)||(6041984-6042040)
chr3 (92-167)||(42297357-42297433)
[»] chr5 (37 HSPs)
chr5 (1-171)||(8145475-8145643)
chr5 (1-172)||(14138768-14138938)
chr5 (1-172)||(4892302-4892473)
chr5 (1-171)||(33584124-33584294)
chr5 (1-171)||(6043307-6043476)
chr5 (1-143)||(31640763-31640905)
chr5 (1-173)||(25398338-25398510)
chr5 (1-151)||(27481922-27482074)
chr5 (92-167)||(8145379-8145454)
chr5 (80-171)||(22912852-22912942)
chr5 (70-172)||(12614531-12614633)
chr5 (1-172)||(37321587-37321758)
chr5 (1-171)||(2477736-2477906)
chr5 (1-172)||(3521801-3521971)
chr5 (1-150)||(11360947-11361096)
chr5 (1-168)||(12850901-12851069)
chr5 (100-167)||(14138672-14138739)
chr5 (92-167)||(22913040-22913115)
chr5 (92-167)||(2477640-2477715)
chr5 (92-167)||(6043497-6043572)
chr5 (92-167)||(11361117-11361192)
chr5 (92-167)||(12614719-12614794)
chr5 (78-171)||(38899520-38899613)
chr5 (92-167)||(3362782-3362857)
chr5 (92-167)||(3521992-3522067)
chr5 (92-167)||(4892206-4892281)
chr5 (92-167)||(25398242-25398317)
chr5 (92-143)||(31640926-31640977)
chr5 (92-167)||(38899712-38899787)
chr5 (1-170)||(3362878-3363048)
chr5 (92-167)||(4433993-4434068)
chr5 (92-167)||(12850805-12850880)
chr5 (78-133)||(13664737-13664792)
chr5 (100-167)||(33584323-33584390)
chr5 (1-60)||(36880229-36880288)
chr5 (103-147)||(10458421-10458465)
chr5 (100-148)||(37321787-37321835)
[»] chr4 (52 HSPs)
chr4 (70-173)||(37219801-37219904)
chr4 (75-173)||(11314044-11314142)
chr4 (1-171)||(36073450-36073619)
chr4 (1-171)||(42671769-42671939)
chr4 (1-174)||(46441944-46442117)
chr4 (1-172)||(7744906-7745077)
chr4 (1-172)||(21802114-21802287)
chr4 (1-173)||(22199361-22199531)
chr4 (1-143)||(30563309-30563452)
chr4 (1-172)||(50156373-50156543)
chr4 (1-172)||(37934735-37934906)
chr4 (1-169)||(17655530-17655699)
chr4 (92-167)||(33530674-33530749)
chr4 (1-174)||(53123131-53123304)
chr4 (1-169)||(9088970-9089138)
chr4 (1-173)||(31078612-31078784)
chr4 (1-173)||(47290166-47290338)
chr4 (78-175)||(2625015-2625111)
chr4 (1-174)||(49387679-49387853)
chr4 (1-172)||(10442581-10442754)
chr4 (92-167)||(10442775-10442850)
chr4 (104-171)||(25063369-25063436)
chr4 (92-167)||(31078805-31078880)
chr4 (78-177)||(36073129-36073227)
chr4 (92-167)||(49387874-49387949)
chr4 (92-162)||(42671678-42671748)
chr4 (1-174)||(4751546-4751720)
chr4 (78-171)||(33530479-33530571)
chr4 (1-172)||(44893007-44893178)
chr4 (1-171)||(44893526-44893696)
chr4 (92-167)||(2624841-2624916)
chr4 (92-167)||(7745098-7745173)
chr4 (92-167)||(21802308-21802383)
chr4 (92-167)||(22199265-22199340)
chr4 (92-167)||(23964451-23964526)
chr4 (100-167)||(24392671-24392738)
chr4 (92-167)||(36072951-36073026)
chr4 (92-167)||(47290070-47290145)
chr4 (78-151)||(36073276-36073349)
chr4 (73-170)||(44744605-44744698)
chr4 (92-167)||(4751450-4751525)
chr4 (1-174)||(24128339-24128512)
chr4 (100-167)||(36073354-36073421)
chr4 (92-167)||(44893430-44893505)
chr4 (92-167)||(53123034-53123110)
chr4 (92-143)||(9088898-9088949)
chr4 (1-60)||(36073047-36073106)
chr4 (92-167)||(46441848-46441923)
chr4 (92-167)||(50156564-50156639)
chr4 (80-169)||(24392854-24392942)
chr4 (130-171)||(53998979-53999020)
chr4 (92-167)||(44893199-44893275)
[»] chr6 (34 HSPs)
chr6 (70-174)||(29693615-29693719)
chr6 (1-171)||(18365369-18365538)
chr6 (1-171)||(18370633-18370802)
chr6 (1-173)||(28675248-28675420)
chr6 (1-174)||(33696796-33696970)
chr6 (1-171)||(2309218-2309388)
chr6 (1-171)||(17175816-17175986)
chr6 (1-173)||(17705262-17705430)
chr6 (1-175)||(23290872-23291049)
chr6 (1-136)||(8515556-8515691)
chr6 (1-60)||(9752151-9752210)
chr6 (92-167)||(33695313-33695388)
chr6 (92-167)||(33696700-33696775)
chr6 (80-174)||(11548381-11548474)
chr6 (1-171)||(33695121-33695292)
chr6 (92-167)||(6127279-6127354)
chr6 (92-167)||(23291070-23291145)
chr6 (92-162)||(11548574-11548644)
chr6 (14-143)||(18889466-18889595)
chr6 (116-171)||(2121004-2121059)
chr6 (104-167)||(8515723-8515786)
chr6 (92-167)||(17176007-17176082)
chr6 (92-167)||(17705451-17705526)
chr6 (100-167)||(18365567-18365634)
chr6 (100-167)||(18370831-18370898)
chr6 (92-167)||(28675152-28675227)
chr6 (78-173)||(32702383-32702477)
chr6 (1-159)||(6031547-6031706)
chr6 (92-144)||(9752231-9752283)
chr6 (92-167)||(18889683-18889757)
chr6 (1-60)||(25987030-25987089)
chr6 (94-171)||(582522-582600)
chr6 (104-170)||(34238883-34238948)
chr6 (92-160)||(32702216-32702284)
[»] chr2 (32 HSPs)
chr2 (1-171)||(9293370-9293541)
chr2 (70-173)||(22592880-22592985)
chr2 (1-171)||(33380307-33380477)
chr2 (1-171)||(35160857-35161029)
chr2 (80-171)||(9723586-9723677)
chr2 (92-167)||(14941352-14941427)
chr2 (1-171)||(7475303-7475473)
chr2 (1-171)||(23267857-23268027)
chr2 (92-167)||(9293562-9293637)
chr2 (92-167)||(31174820-31174895)
chr2 (1-171)||(10661987-10662158)
chr2 (1-173)||(13354946-13355120)
chr2 (1-159)||(3989176-3989334)
chr2 (1-168)||(31174633-31174799)
chr2 (80-172)||(43331092-43331183)
chr2 (92-167)||(10661891-10661966)
chr2 (92-167)||(13354850-13354925)
chr2 (92-167)||(21936085-21936160)
chr2 (92-167)||(23268048-23268123)
chr2 (92-167)||(35160761-35160836)
chr2 (92-167)||(43330916-43330991)
chr2 (70-142)||(16767285-16767357)
chr2 (1-60)||(40262642-40262701)
chr2 (80-150)||(37335824-37335894)
chr2 (1-143)||(21936181-21936325)
chr2 (92-148)||(27847655-27847711)
chr2 (92-167)||(7475494-7475569)
chr2 (100-167)||(9723409-9723476)
chr2 (1-60)||(16767378-16767437)
chr2 (92-167)||(21393674-21393749)
chr2 (92-167)||(33380211-33380286)
chr2 (80-169)||(21393483-21393570)
[»] scaffold0096 (2 HSPs)
scaffold0096 (1-171)||(41111-41280)
scaffold0096 (92-167)||(41015-41090)
[»] scaffold0085 (2 HSPs)
scaffold0085 (1-171)||(47950-48119)
scaffold0085 (92-167)||(47854-47929)
[»] scaffold0228 (5 HSPs)
scaffold0228 (1-173)||(26036-26208)
scaffold0228 (1-173)||(16084-16256)
scaffold0228 (92-160)||(8413-8481)
scaffold0228 (92-160)||(15995-16063)
scaffold0228 (92-160)||(25947-26015)
[»] scaffold0178 (2 HSPs)
scaffold0178 (1-171)||(11721-11891)
scaffold0178 (92-167)||(11625-11700)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-171)||(4496-4666)
scaffold0204 (92-167)||(4400-4475)
[»] scaffold0665 (1 HSPs)
scaffold0665 (92-167)||(3072-3147)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-174)||(12942-13115)


Alignment Details
Target: chr1 (Bit Score: 159; Significance: 8e-85; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 27523220 - 27523003
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||         |||| | ||||||||||||||||||||||||    
T  27523220 taatgttagccaataaaatctcatcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaagttaataaataagactaaaatcaa 27523121  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttccttatctctcttacttatttaacattaaaa 200  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27523120 agggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttccttatctctcttacttatttaacattaaaa 27523021  T
Q  201 tgtaaattatcatggacc 218  Q
    ||||||||||||||||||    
T  27523020 tgtaaattatcatggacc 27523003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 44690909 - 44690818
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    |||||||||||||||  |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  44690909 ttaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 25463776 - 25463946
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  25463776 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatct 25463875  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | |||||||| ||||||| ||||||||| ||||||||||| ||||||| || ||||||||    
T  25463876 aaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 40215088 - 40215262
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| |  ||||||||| ||||| |||||     
T  40215088 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatct 40215187  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttccttat 175  Q
    || |||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||| ||||    
T  40215188 aaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttctttat 40215262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 44094798 - 44094970
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| ||||||||||  |||| ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  44094798 taatgttagccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatcta 44094897  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
    | |||||||| | || ||||| ||||||| ||||||||| ||||||| ||| ||||||| || |||||||||||    
T  44094898 aaggtgattattgtgtcatgtcattcttggatctttctt-ataaaataattcttgatatctagcattttcctta 44094970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 19015504 - 19015675
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  19015504 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatct 19015603  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || |||||||||    
T  19015604 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcattttcct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 36966673 - 36966501
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| ||||||||||  |||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  36966673 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 36966574  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||||    
T  36966573 aaaggtgattattgtgccatgttattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 36966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 33786516 - 33786424
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||||||| ||||| ||||| ||||||||||| | |||||||| |||||||||||||||||||| |||||||| ||||||| || ||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcctt 33786424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 6883587 - 6883757
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  6883587 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 6883686  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || ||||| || | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  6883687 aaaggtgaatattatgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||| ||||| ||||| ||||||||||| | |||||||| |||||||||||||||||||| |||||||| ||||||| || ||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 41876407 - 41876235
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| || |||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  41876407 taatgttaaccaataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 41876308  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    || |||||||| | ||| |||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||||    
T  41876307 aaaggtgattattgtgctatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 41876235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 51737605 - 51737777
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||  || |||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  51737605 taatgttaaccaataaaatctcagcctgaccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 51737704  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||||    
T  51737705 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 51737777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 9910178 - 9910086
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    |||||||||||| || ||||| || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| |||||||||||    
T  9910178 ttaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacattttcc 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 3559717 - 3559887
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgtt-atgtannnnnnnnnatgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||| |||||         |||| || ||||||||| ||||| ||||      
T  3559717 taatgttagccaataaaatctcagcctgggcggaaatcatggggtggtgggtgttaatgtatttttttttatgaaagattaataaatgagactgaaatat 3559816  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | || ||| | ||||||| ||||||||| ||||||||||| ||||||| || ||||||||    
T  3559817 aaaggtgattattgtgtcatatcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 173
Target Start/End: Complemental strand, 20305014 - 20304923
Alignment:
Q  81 ataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    |||||| ||||| ||||| || |||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||||    
T  20305014 ataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 20304923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 37821799 - 37821629
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| || |||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  37821799 taatgttaaccaataaaatctcagcctggccgaaaatcatggggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 37821700  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | || ||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  37821699 aaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 16045784 - 16045859
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  16045784 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 40215067 - 40214992
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  40215067 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 52064443 - 52064373
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttc 170  Q
    |||||||| || |||| ||||| ||||||||||||||||||||||||||||| ||||||| || |||||||    
T  52064443 aagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    ||||||| ||||| ||||| ||||||||||| | |||||||| |||||||||| ||||||||| |||||||| ||||||| || ||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 18404626 - 18404721
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
    ||||||||| ||||| ||||| ||  ||||||| | |||||||| |||||| |||||||||| ||||||||||| ||||||| || |||||||||||    
T  18404626 ttaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcattttcctta 18404721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 44094777 - 44094702
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||  || |||||||||| ||||    
T  44094777 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  94 aaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||| || |||||||| | || ||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 33786629 - 33786696
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattt 168  Q
    ||||||||||| | |||||||| |||||||||||||||||||| |||||||| ||||||| || |||||    
T  33786629 aagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 19015483 - 19015408
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||| | |||||||||  |||||||| |||||| || |||||||||| ||||    
T  19015483 taaaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 25463755 - 25463680
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  |||||| |||||||| || |||||||||| ||||    
T  25463755 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcatt 25463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 25973492 - 25973418
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||| ||| |||||||||  |||| |||||||||| || |||||||||||||||    
T  25973492 taaaatctaagggtgattattctgcc-tgtcattcttgaaattttcatgataaaatctttcttgatatataacatt 25973418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 36966694 - 36966769
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||| | |||||||||  |||||||| |||||| || |||||||||| ||||    
T  36966694 taaaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 37821820 - 37821895
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||| | |||||||||  |||||||| |||||| || |||||||||| ||||    
T  37821820 taaaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 44690994 - 44690935
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| ||||||||||  |||| ||||||| |||||||| |||||||||||||    
T  44690994 taatgttagccaataaaatctcagtctggccggaaatcatggggtgttgggtgttatgta 44690935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 44691015 - 44691090
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||| || |||| |||||||||| |||||||||||||| || |||||||| || |||||||| ||||||    
T  44691015 taaaatctaagagttattattctgccatgtaattcttgaatctttttttataaaatctttcttgatatacaacatt 44691090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 25973585 - 25973677
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||||| ||||| ||||  || |||||||| | || ||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  25973585 ttaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 52329452 - 52329508
Alignment:
Q  77 gttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatc 133  Q
    |||||||| ||||||| ||||| ||||||||||| ||||| |||| |||||||||||    
T  52329452 gttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 3559688 - 3559621
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||| ||  ||| ||||||||||| || |||||||||| ||||    
T  3559688 aagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 3559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 6883566 - 6883491
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  |||||| | |||||| || || ||||||| ||||    
T  6883566 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 10167577 - 10167672
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||||||||||||||| ||||| || |||||||| | |  ||| | |||||| ||| ||| || ||||||||||| || |||| |||||||||||||    
T  10167577 ttaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacattttcctt 10167672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 18404521 - 18404446
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| || |||||||| ||| |||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  18404521 taaaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18404542 - 18404601
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| ||||||||||   ||||||||||| || ||||| |||||||||||||    
T  18404542 taatgttagccaataaaatctcagtttggtcggaaatcatagggtggtgggtgttatgta 18404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 40273781 - 40273714
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatat 159  Q
    ||||||| ||||||||||| | || ||||| |||||||||| |||||||| |||||| || |||||||    
T  40273781 taaaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatat 40273714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 24844824 - 24844655
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| ||||||||||||||| | |||||| || ||||| |||||||||||||         |||| |||||||||| ||||| ||||||| |    
T  24844824 taatgttagccaataaaatctcatcctgattggaaatcatagggtggtgggtgttatgtatttttttt-atgaaaggttaataattaagattaaaatcta 24844726  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || ||||||| | |||||||  |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  24844725 agagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacattttcc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 20091766 - 20091598
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| ||| | ||||||| |||||||| |||||||||||||          |||| |||||||||||| ||||| |||||     
T  20091766 taatgttagccaataaaatctcagcctagccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatct 20091667  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    ||||||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||    
T  20091666 aagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 34665482 - 34665649
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||| | ||| || |||| |||| ||| |||||||||||||         |||| |||||||||||| ||||| ||||| |    
T  34665482 taatgttagccaataaaatctcagcttggccgaaaatcatggagtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatcta 34665581  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    |||||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||    
T  34665582 agggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 3890505 - 3890412
Alignment:
Q  75 aggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattt 168  Q
    |||||||||||||||| ||||||| || |||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||| || |||||    
T  3890505 aggttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 37986020 - 37985850
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    ||||| |||||| ||||||||||  |||| ||||||| |||||||| |||||||||||||         |||| || |||||||||  |||| ||||| |    
T  37986020 taatgctagccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatcta 37985921  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    | |||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| || |||||||||    
T  37985920 aaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 169
Target Start/End: Complemental strand, 37132571 - 37132477
Alignment:
Q  75 aggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    |||||||||||||||||| ||||| ||||||||||| | || ||||| |||| |||||||||||||||||||||||| ||||||| || ||||||    
T  37132571 aggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1645930 - 1645757
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn--atgataggttaataaataagactaaaatc 98  Q
    |||||||||| | |||||||||| ||||||||||||| |||||||| |||||||||||||           |||| || ||||||||| ||||| |||||    
T  1645930 taatgttagctaataaaatctcagcctggtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatc 1645831  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
     || |||||||| | |||||||| |||||||  |||||||| ||||||||||| ||||||| || ||||||||||    
T  1645830 taaaggtgattattgtgccatgtcattcttggttctttctt-ataaaatcattcttgatatctagcattttcctt 1645757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 17841815 - 17841645
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  17841815 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 17841716  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  17841715 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 30055617 - 30055786
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| | ||| ||||||| |||||||| ||| |||||||||          |||| |||||||||||| |||||||||||     
T  30055617 taatgttagccaataaaatctcagc-tggccggaaatcatggggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaatct 30055715  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||||||| | || ||||| ||||||||||||||||| ||||||||||| || |||| || ||||||||    
T  30055716 aagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 15187660 - 15187831
Alignment:
Q  1 taatgttagccagtaaaatctc-atcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatca 99  Q
    |||||||||||| ||||||||| | ||||| ||||||| |||| ||| |||||||||||||         |||| || ||||||||| ||||| |||||     
T  15187660 taatgttagccaataaaatctctagcctggccggaaatcatggagtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatct 15187759  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    || |||||||| | ||| |||| ||||||| ||||||||| ||||||||||| ||||||| || |||||||||    
T  15187760 aaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 26042078 - 26041907
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||  ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  26042078 taatgttaaccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 26041979  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || |||||||||    
T  26041978 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 40780094 - 40779923
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| ||| |||||||||          |||| || ||||||||| ||||| |||||     
T  40780094 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 40779995  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || |||||||||    
T  40779994 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 6108198 - 6108028
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  6108198 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatct 6108099  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | || ||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  6108098 aaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 30834938 - 30834849
Alignment:
Q  83 aaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    |||||| ||| ||||| ||||||| ||| |||| ||||| |||||| |||||||||||||||||||||| ||||||| || |||||||||    
T  30834938 aaataacactgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 41819663 - 41819590
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgata 143  Q
    ||||||||||||||||| ||||| ||||| ||||||||||| | || ||||| |||||||||||||||||||||    
T  41819663 atgataggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 27782103 - 27782178
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||||  || |||||||||| ||||    
T  27782103 taaaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 30835033 - 30835107
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||| | ||||||||| || |||||||||||||||    
T  30835033 taaaatcaaagggtgattattctgccatgtcattcttgaat-tttttcgataaaatctttcttgatatataacatt 30835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 31347659 - 31347569
Alignment:
Q  82 taaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||||| ||||| ||||| || |||||||| | |||||||| |||||||||||||||||||| |||||||| ||||||| || ||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcctt 31347569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 32064824 - 32064749
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  32064824 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 32064845 - 32065017
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta--nnnnnnnnnatgataggttaataaataagactaaaatc 98  Q
    |||||||| ||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||           |||| || ||||||||| ||||| |||||    
T  32064845 taatgttaaccaataaaatctcagcctggccggaaatcatgggctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatc 32064944  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
     || |||||||| | || ||||| |||||| ||| |||||| ||||||||||| ||||||| || |||||||||    
T  32064945 taaaggtgattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 34665461 - 34665386
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  34665461 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 42755028 - 42755103
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  42755028 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcatt 42755103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 1503730 - 1503637
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    ||||||||| ||||| ||||| || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || |||||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 10044526 - 10044618
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||||| ||| | ||||| || |||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  10044526 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 35353141 - 35353300
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| ||| |||| |||||||||||||          |||| || ||||||||| ||| ||||||      
T  35353141 taatgttaaccaataaaatctcagcctggccggaaatcatgaggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaattt 35353240  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatata 160  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||||    
T  35353241 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatata 35353300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 3597006 - 3596836
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||  ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  3597006 taatgttaaccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 3596907  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | |||||| | |||||| ||| |||||| ||||||||||| ||||||| || ||||||||    
T  3596906 aaaggtgattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 14129037 - 14129128
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttc 170  Q
    ||||||||| ||||| ||||| || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || |||||||    
T  14129037 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 25581204 - 25581034
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||  ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  25581204 taatgttaaccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 25581105  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | ||  |||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  25581104 aaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 8453947 - 8454065
Alignment:
Q  14 taaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaaagggtgattaatc 113  Q
    |||||||||| ||||| |||||||||||| ||| |||||||||||||         |||| || ||||||||| ||||| ||||| || |||||||| |     
T  8453947 taaaatctcagcctggccggaaattatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 8454046  T
Q  114 tgccatgtgattcttgaat 132  Q
    |||||||| ||||||||||    
T  8454047 tgccatgtcattcttgaat 8454065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 17841836 - 17841911
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  |||||||| |||||| || |||||||||| ||||    
T  17841836 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 20091787 - 20091862
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||  || |||||||||| ||||    
T  20091787 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 24211259 - 24211169
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    ||||||||| ||||| ||||| || |||||||| | |||||||| ||||||| ||||||||| ||||||||||| ||||||| || ||||||    
T  24211259 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 31347768 - 31347843
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||| |||||||| |||||  || |||||||||| ||||    
T  31347768 taaaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 38017047 - 38016980
Alignment:
Q  95 aatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatata 162  Q
    |||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || ||||||||||    
T  38017047 aatccaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 38016980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 39772787 - 39772862
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||| ||||||||||  || |||||||||||||||    
T  39772787 taaaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacatt 39772862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 40780115 - 40780190
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  |||||||| |||||| || |||||||||| ||||    
T  40780115 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 41819764 - 41819839
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||| | |||||| || | |||||||||||||| || |||||||||||||||    
T  41819764 taaaatctaagggtgattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacatt 41819839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 7022057 - 7021988
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatat 161  Q
    ||||||| ||||||||||| |||||||| | |||||||||| |||||||| |||||| || |||||||||    
T  7022057 taaaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatatat 7021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 7022159 - 7022251
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||||||| ||||| ||||| ||||| ||||| | || | ||| |||||||||||||||||||| |||||||| ||||||| || ||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgat-aaatcattgttgatatctagcattttcctt 7022251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 42755007 - 42754837
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| || |||| ||||| || |||||||||||||          |||| || ||||||||| ||||| |||||     
T  42755007 taatgttaaccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 42754908  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | | |||||| |||||| ||| |||||| ||||||||||| ||||||| || ||||||||    
T  42754907 aaaggtgattattgtaccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 1645951 - 1646026
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| ||||||||||  ||||| ||  ||||||||||||||| || |||||||||| ||||    
T  1645951 taaaatctaagggtgattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcatt 1646026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 1886625 - 1886672
Alignment:
Q  112 tctgccatgtgattcttgaatctttcttgataaaatcattattgatat 159  Q
    ||||||| || ||||||||||||||||||||||||||||| |||||||    
T  1886625 tctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 6108219 - 6108294
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  |||||| | |||||| || |||||||||||||||    
T  6108219 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacatt 6108294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 14128943 - 14128868
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||| ||||||||||| || |||||||||| ||||    
T  14128943 taaaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 14128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 15187639 - 15187564
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| |||||| |||| |||||||| | |||||||||  ||||||||||||||| || |||||||||| ||||    
T  15187639 taaaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24211518 - 24211459
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||    
T  24211518 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 24211547 - 24211614
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||  |||||||||  ||||||||||||||| || |||||||||| ||||    
T  24211547 aagggtgattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcatt 24211614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 32393929 - 32393862
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  32393929 aagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 35353120 - 35353045
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  |||||||| |||||| || |||||||||| ||||    
T  35353120 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 35353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 37986041 - 37986116
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||| ||||||||||| || |||||||||| ||||    
T  37986041 taaaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 26042103 - 26042177
Alignment:
Q  93 aaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    |||||| ||||||||||| |||| ||||| |||||||||  ||||||||||||||| || || ||||||| ||||    
T  26042103 aaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 38017047 - 38017201
Alignment:
Q  14 taaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatc-aaagggtgattaat 112  Q
    |||||||||| ||||| ||||||| |||||||| |||||||||||||          ||| || ||||||||| ||||| ||||| |||||   |||| |    
T  38017047 taaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttt-tgaaagattaataaatgagactgaaatctaaaggtaaattatt 38017145  T
Q  113 ctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
     || ||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||    
T  38017146 gtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 3597027 - 3597078
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgata 143  Q
    ||||||| |||||| |||| |||||||||| ||||||||| |||||||||||    
T  3597027 taaaatctaagggtaattattctgccatgtcattcttgaaactttcttgata 3597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 3817916 - 3817967
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgata 143  Q
    ||||||| ||||||||||| |||| ||||| |||||||||| ||||||||||    
T  3817916 taaaatctaagggtgattattctgtcatgtaattcttgaatttttcttgata 3817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3890582 - 3890523
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| |||||||||||| |||  | |||| |||||||| |||||||||||||    
T  3890582 taatgttagccaataaaatctcatcatggctgaaaatcatggggtggtgggtgttatgta 3890523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 8453913 - 8453838
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| | || ||||| |||||||||  |||||||| |||||| || |||||||||| ||||    
T  8453913 taaaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10044443 - 10044502
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| ||||||||||  |||||||||||| |||| ||| ||| |||||||||    
T  10044443 taatgttagccaataaaatctcaatctggtcggaaatcatggagtggtggttgttatgta 10044502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 15972863 - 15972914
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgata 143  Q
    ||||||| ||||||||||| |||| ||||| |||||| ||||||||||||||    
T  15972863 taaaatctaagggtgattattctgtcatgtcattcttcaatctttcttgata 15972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27835418 - 27835359
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| |||||||||| ||| | ||||||| ||||| || |||||||||||||    
T  27835418 taatgttagccaataaaatctcagcctagacggaaatcatgggatggtgggtgttatgta 27835359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 27835439 - 27835514
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| |||| |||||| | | |||||| |||||||||| |||||| |||| ||| ||||||||||||| ||||    
T  27835439 taaaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcatt 27835514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 37132652 - 37132719
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    |||| |||||| |||||||||| |||||| ||| ||||||||||||||  || |||||||||| ||||    
T  37132652 aaggatgattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcatt 37132719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41819743 - 41819684
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| |||||||||| || || ||||||| |||||||| || ||||||||||    
T  41819743 taatgttagccaataaaatctcagcccggccggaaatcatggggtggtgtgtgttatgta 41819684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 20010063 - 20009895
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||         || | |||||||||||| ||||||||||| |    
T  20010063 taatgttagccaataaaatctcaacctggccggaaattatggggttatgggtgttatgtattttttcttattaaaggttaataaatgagactaaaatcta 20009964  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    ||  |||||| | || ||||| |||||||||||||| ||||||||||||||  |||||| || ||||||    
T  20009963 agtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 24395072 - 24395241
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  24395072 taatgttagccaataaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatcta 24395171  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | |||||||| | |||||||| |||||||||||||| || ||||||||||| ||||||| || ||||||||    
T  24395172 aaggtgattattgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatatctagcattttcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3962079 - 3962250
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||| | ||| ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  3962079 taatgttagccaataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 3962178  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    | |||||||| | |||||||| ||||||| || |||||| ||||||||||| ||||||| || ||||||||||    
T  3962179 aaggtgattattgtgccatgtcattcttggatatttctt-ataaaatcattcttgatatctagcattttcctt 3962250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 42696183 - 42696355
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    ||||||||| || |||||||||| ||||| ||||||| | |||||| ||| |||||||||          |||| | |||||||||| ||||| |||||     
T  42696183 taatgttagtcaataaaatctcaacctggccggaaatcaaggggtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatct 42696282  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    ||||||||||| | | |||||| |||||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  42696283 aagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcct 42696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 45637812 - 45637982
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    ||||| |||||| ||||||||||  |||| ||||||| |||||||| ||| |||||||||         |||| || ||||||||| ||||| ||||| |    
T  45637812 taatgctagccaataaaatctcagtctggccggaaatcatggggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 45637911  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    | |||||||| | |||||||| ||||||||||||||||| ||||||||||| || |||| || |||||||||    
T  45637912 aaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4974700 - 4974532
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| ||||||||||   ||| ||||||| ||| |||| |||||||||||||          |||| |||||||||||| ||||| |||||     
T  4974700 taatgttagccaataaaatctcagtttggccggaaatcatgaggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatct 4974601  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    ||||||||||| | |||||||| |||||||||||||| || ||||||||||| ||||||| || ||||||    
T  4974600 aagggtgattattgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 29737314 - 29737403
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatat 159  Q
    |||| |||||||||||| ||||| ||||| ||||||||||| | || ||||| |||||| |||||||||||||||||||||| |||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatat 29737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 34483016 - 34483108
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||||| ||| | ||||| || |||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  34483016 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 42611911 - 42612082
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||| |||  |||  ||||||| |||||||| |||||||||||||          |||| || ||||||||||||||| |||||     
T  42611911 taatgttagccaataaaatttcagtctgaccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatct 42612010  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    || |||||||| | |||||||| ||||||  ||||||||| ||||||||||| ||||||| || |||||||||    
T  42612011 aaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttcct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 48880892 - 48880721
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta-nnnnnnnnnatgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| | ||| |||||     
T  48880892 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatct 48880793  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    ||  ||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || |||||||||    
T  48880792 aaatgtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 4974721 - 4974796
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  4974721 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 42611890 - 42611815
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  42611890 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 45637791 - 45637716
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  45637791 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 15329352 - 15329277
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||| ||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  15329352 taaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 15577734 - 15577640
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||||||||| ||||| ||||| || |||||||| | || ||||| ||||||| ||||||||| ||||||||||| ||||||| || ||||||||||    
T  15577734 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcctt 15577640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 15577844 - 15577911
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  15577844 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 48880913 - 48880988
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||| ||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  48880913 taaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

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Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttc 170  Q
    ||||||| ||||| ||||| ||||||||||| | |||||||| ||| || ||||||||||||| |||||||| ||||||| || |||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgat-aaatcattcttgatatctagcattttc 37476876  T

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Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 18037157 - 18037249
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    |||||||  |||| ||||| ||||||||||| | | |||||| |||||| ||||||||||||| |||||||| ||||||| || ||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgat-aaatcattgttgatatctagcattttcctt 18037249  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 15329452 - 15329546
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||||||||| ||||| ||||| ||  ||||||| | |||||||| |||||||||| |||||| ||||||||||| || |||| || ||||||||||    
T  15329452 ttaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattctttatatctagcattttcctt 15329546  T

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Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 18037049 - 18036982
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||| ||| |||||||| |||||| || |||||||||| ||||    
T  18037049 aagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcatt 18036982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 25167733 - 25167651
Alignment:
Q  88 agactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||| ||||| || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  25167733 agactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 25167651  T

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Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25167815 - 25167756
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||| ||| ||||||||||  |||| ||||||| ||||||||||||||||||||||    
T  25167815 taatgttaaccaataaaatctcagtctggccggaaatcatggggtgatgggtgttatgta 25167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 34482914 - 34482839
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  |||||| |||||||| || |||||||||| ||||    
T  34482914 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 35444637 - 35444562
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  |||||||| |||||| || || ||||||| ||||    
T  35444637 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcatt 35444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 35445575 - 35445668
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    ||||||||| ||||| ||||| || |||||||| | || ||| | |||||||||| |||||| ||||||||||| ||||||| || |||||||||    
T  35445575 ttaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 36790325 - 36790271
Alignment:
Q  117 catgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||| |||||||||||||| ||||||||| |||||||||||| || ||||||||    
T  36790325 catgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 3962050 - 3961983
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||| ||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  3962050 aagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 36790460 - 36790527
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    |||||| |||| |||||||||| |||||| ||| ||||||||||||| | || |||||||||| ||||    
T  36790460 aagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcatt 36790527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 35876422 - 35876514
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||||| ||||| ||||| || |||||||| | |||||||| ||| ||  || |||||| ||||||||||| ||||||| || ||||||||    
T  35876422 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttctt-ataaaatcattcttgatatctagcattttcc 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    |||| |||||||||||| ||||| ||||| ||||||||||| | |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  170 cc 171  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 47738281 - 47738382
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    |||| |||||||||||| ||||| ||||| |||| |||||| | |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  170 cc 171  Q
    ||    
T  47738381 cc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 3137379 - 3137205
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| ||||||||||||||||||||||          |||| || ||||||||| ||||| |||||     
T  3137379 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatct 3137280  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttccttat 175  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||||||    
T  3137279 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttat 3137205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 40328006 - 40328105
Alignment:
Q  75 aggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
    |||| ||||||||||||| ||||| ||||||||||| | || ||||| ||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  40328006 aggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcctta 40328105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 33145812 - 33145980
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| ||||  ||||||||||| |||| |||||| ||||||          |||| |||||||||||||||||| |||||     
T  33145812 taatgttagccaataaaatctcagcctgaccggaaattatgaggtggtgggtggtatgtattttttttttatgaaaggttaataaataagactgaaatct 33145911  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    ||||||||||| | || ||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||    
T  33145912 aagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22426309 - 22426138
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||| |||  |||| ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  22426309 taatgttagccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 22426210  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    |  ||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||||    
T  22426209 aatgtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 22426138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 24343724 - 24343820
Alignment:
Q  75 aggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    |||||||||||||||||| ||||| |||||||||||   |  ||||| |||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  24343724 aggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttcc 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 33839705 - 33839797
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatata 162  Q
    |||| |||||||||||| ||||| ||||  ||||||||||| | || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatata 33839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 173
Target Start/End: Complemental strand, 36864921 - 36864825
Alignment:
Q  77 gttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    |||||||||| ||||| ||||| ||||||||||| | || ||||| |||||||||||||| |||||||||||||| ||||||| || ||||||||||    
T  36864921 gttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcctt 36864825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 37522153 - 37522323
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta-nnnnnnnnnatgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| |||||||||||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  37522153 taatgttaaccaataaaatctcaacctggccggaaattatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 37522252  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | |||||||| |||||| ||| |||||| ||||||||||| ||||||| || ||||||||    
T  37522253 aaaggtgattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    ||||||| ||||||||||||||  ||||| |  |||||||| |||||||||| ||| |||||||||| |||||||||||||| ||||||| |||||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  170 c 170  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19650864 - 19650695
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||  |||||||||| | ||| ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  19650864 taatgttagccgataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 19650765  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | |||||||| | || ||||| ||||||| ||||||||| ||||||||||| ||||||| || ||||||||    
T  19650764 aaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 30385525 - 30385670
Alignment:
Q  25 cctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgat 124  Q
    ||||| ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| || |||||||| | |||||||| ||    
T  30385525 cctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 30385624  T
Q  125 tcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  30385625 tcttgaatctttctt-ataaaatcattcttgatatttagcattttcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 8320469 - 8320378
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttc 170  Q
    ||||||||| ||||| ||||| || |||||||| | |||||||| ||||||||||||||||| ||||||||||||||||||| || |||||||    
T  8320469 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 33113893 - 33114066
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn--atgataggttaataaataagactaaaatc 98  Q
    |||||||||||| |||||| |||  |||| ||||||| |||||||| |||||||||||||           |||| || ||||||||| ||| | |||||    
T  33113893 taatgttagccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatc 33113992  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
     || |||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||||    
T  33113993 taaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 33114066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 3456164 - 3456337
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| ||||||||||  |||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  3456164 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 3456263  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
    || | |||||| | || ||||| ||||||||||||||||| ||||||||||| ||||||| || |||||||||||    
T  3456264 aaagatgattagtgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctta 3456337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 6042055 - 6042151
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttccttat 175  Q
    ||||||||| ||||| ||||| || |||||||| | |||||||| ||||||| ||||||||| ||||||||||| ||||||| || ||||||||||||    
T  6042055 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttccttat 6042151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 34482775 - 34482679
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttccttat 175  Q
    ||||||||| ||||| ||||| || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||||||    
T  34482775 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttat 34482679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 37216940 - 37216844
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttccttat 175  Q
    ||||||||| ||||| ||||| || |||||||| | | |||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||||||    
T  37216940 ttaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttat 37216844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 3574491 - 3574321
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta-nnnnnnnnnatgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| | ||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  3574491 taatgttagccaataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 3574392  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    |  |||||||| | || ||||| ||||||| ||||||||| ||||||||||| ||||||| || ||||||||    
T  3574391 agaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 9797015 - 9797090
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| || |||||||| |||||||||| |||||||||| |||||||| |||||| || |||||||||||||||    
T  9797015 taaaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacatt 9797090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 8361924 - 8361831
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
    ||||||| ||||| ||||| ||||||||||| | || ||||| |||||||||| ||||||||| |||||||| ||||||| || |||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttcctta 8361831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 3089517 - 3089689
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn---atgataggttaataaataagactaaaat 97  Q
    |||||||||||| |||||||||| | ||| ||||||| |||||||| |||||| ||||||            |||| || ||||||||| ||||| ||||    
T  3089517 taatgttagccaataaaatctcagcttggccggaaatcatggggtggtgggtgctatgtattatttttttttatgaaagattaataaatgagactgaaat 3089616  T
Q  98 caaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | || |||||||| | |||||||| ||||||  ||||||||| ||||||||||| ||||||| || ||||||||    
T  3089617 ctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttcc 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 3574513 - 3574588
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  3574513 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 6041963 - 6041888
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||| ||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  6041963 taaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||| ||||| ||||| ||| ||||||| | || ||||| |||||||||||||||||||| |||||||| ||||||| || ||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 33113872 - 33113797
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  |||||| |||||||| || |||||||||| ||||    
T  33113872 taaaatctaagggtgattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcatt 33113797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    |||| |||||||||||| ||||| ||||  ||||||||||  | |||||||| |||||| ||| |||||||||||||||||| || |||| || ||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 41883112 - 41883031
Alignment:
Q  75 aggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattga 156  Q
    ||||| |||||||||||| ||||| || | |||||| | | |||||| ||||||||||||||||| ||||||||||| ||||    
T  41883112 aggttgataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 41224434 - 41224505
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    ||||||||||| | |||||||| |||||||||| ||||||||| |||||||| ||||||| || |||||||||    
T  41224434 aagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 2754796 - 2754721
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| || |||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  2754796 taaaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 3137400 - 3137475
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| | |||||||| |||||||||  |||||||| |||||| || |||||||||| ||||    
T  3137400 taaaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 3456143 - 3456068
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||| | |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  3456143 taaaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3456068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 11347347 - 11347272
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| |||||| |||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  11347347 taaaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11347272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 19650886 - 19650961
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| || |||||||| |||||||||| |||||| ||  ||||||||||||||| || || ||||||||||||    
T  19650886 taaaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacatt 19650961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 22426330 - 22426405
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| ||| || ||  ||||||||||||||| || || ||||||||||||    
T  22426330 taaaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacatt 22426405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30385111 - 30385170
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||    
T  30385111 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 37217047 - 37217114
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  37217047 aagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40327925 - 40327984
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| |||||||||| ||||| ||||||| || ||||| |||||||||||||    
T  40327925 taatgttagccaataaaatctcaacctggccggaaatcatagggtggtgggtgttatgta 40327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 48160984 - 48160909
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||| | |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  48160984 taaaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 48160909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 8362031 - 8362080
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttga 141  Q
    ||||||| ||||||||||| |||||||||| |||||||||| ||||||||    
T  8362031 taaaatctaagggtgattattctgccatgtcattcttgaatttttcttga 8362080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 8320578 - 8320645
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| | |||||| | |||||| ||  ||||||||||||||| || |||||||||||||||    
T  8320578 aagggtgattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacatt 8320645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24343647 - 24343706
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| |||||||||||||||  || |||| || ||||| |||||||||||||    
T  24343647 taatgttagccaataaaatctcatcctgaccgaaaatcatcgggtggtgggtgttatgta 24343706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 30385082 - 30385015
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| ||| |||||  ||||||||||||||| || |||||| ||| ||||    
T  30385082 aagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcatt 30385015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 33839610 - 33839535
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| || |||||||| |||| ||||| |||||| ||| ||| ||||||||||| || || ||||||||||||    
T  33839610 taaaatctaatggtgattattctgtcatgttattcttaaattttttttgataaaatctttcttaatatataacatt 33839535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 34482896 - 34482971
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| ||| |||| | |||||||||  |||||||| |||||| || |||||||||| ||||    
T  34482896 taaaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 34482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 41883217 - 41883260
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgata 143  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||    
T  41883217 aagggtgattattctgccatgtcattcttgaatttttcttgata 41883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42297454 - 42297513
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| |||||||||| ||||  ||||||| |||||||| ||| |||||||||    
T  42297454 taatgttagccaataaaatctcagcctgaccggaaatcatggggtggtggatgttatgta 42297513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 47738184 - 47738117
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatat 159  Q
    ||||||| || ||| |||| |||||||| | |||||||||| ||||||||||||||| || |||||||    
T  47738184 taaaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 47738205 - 47738264
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| |||||||||| ||||  | ||||| |||||||| |||||||||||||    
T  47738205 taatgttagccaataaaatctcagcctgaccagaaatcatggggtggtgggtgttatgta 47738264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 48161084 - 48161178
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||||||||| ||||| ||||| || |||||||| | || |||||  |||||| || |||||| ||||||||||| ||||||| || ||||||||||    
T  48161084 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttctt-ataaaatcattcttgatatctagcattttcctt 48161178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6041984 - 6042040
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttat 57  Q
    |||||||||||| |||||||||| ||||  ||||||| |||||||| ||| ||||||    
T  6041984 taatgttagccaataaaatctcagcctgaccggaaatcatggggtggtggttgttat 6042040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 42297433 - 42297357
Alignment:
Q  92 taaaatcaaagggtgattaatct-gccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| ||| | ||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  42297433 taaaatctaagggtgattattctagtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 42297357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 8145475 - 8145643
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||| ||||||||||||| ||||| || |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  8145475 taatgttagccaataaaatctcagcctggtcggaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 8145573  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | |||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  8145574 aaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 14138768 - 14138938
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||| |||| |||||||| |||||||| |||||||||||||         |||| || ||||||||| ||| | ||||| |    
T  14138768 taatgttagccaataaaatctcagcctgatcggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatcta 14138867  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    | |||||||| | |||||||| ||||||||||||||||| ||||||||||| || |||| || |||||||||    
T  14138868 aaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 4892302 - 4892473
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnna-tgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||         | ||| || ||||||||| ||||| |||||     
T  4892302 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatct 4892401  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || |||||||||    
T  4892402 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33584294 - 33584124
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  33584294 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 33584195  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  33584194 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 6043476 - 6043307
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||| ||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  6043476 taatattaaccaataaaatctcagcctggccggaaatcatggggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 6043377  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | |||||||| | |||||||| |||||| ||| |||||| ||||||||||| ||||||| || ||||||||    
T  6043376 aaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 31640905 - 31640763
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||         |||| ||||||||||||||||    |||| |    
T  31640905 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaaggttaataaataagatatcaatcta 31640806  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgata 143  Q
    | |  ||||| |||||||||| |||||||||||||||||||||    
T  31640805 aagtcgattattctgccatgtcattcttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 25398338 - 25398510
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  25398338 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 25398437  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    || |||||||| | |||||||| ||| |||||| |||||| ||||||||||| ||||||| || ||||||||||    
T  25398438 aaaggtgattattgtgccatgtcattgttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 25398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 27481922 - 27482074
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta-nnnnnnnnnatgataggttaataaataagact-aaaatc 98  Q
    |||||||||||| |||||| ||||||| ||||||||| |||||||| |||||||||||||          || | |||||||||||||||| | ||||||    
T  27481922 taatgttagccaataaaatttcatcctagtcggaaatcatggggtggtgggtgttatgtattttttttttataaaaggttaataaataagattaaaaatc 27482021  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcatt 151  Q
     || |||||||| ||||  |||| |||||||||||||| ||||||||||||||    
T  27482022 taaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcatt 27482074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 8145454 - 8145379
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||||||||    
T  8145454 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 8145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||| ||||| ||||| ||||||||||| | |||||||| |||||||||||||||||||| |||||||| ||||||| || ||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 12614633 - 12614531
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    |||| |||||||||||| ||||| ||||| || |||||||| | |||||||| |||||| ||||||| |||||||||||||  ||||||| || ||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  170 cct 172  Q
    |||    
T  12614533 cct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 37321758 - 37321587
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| ||||||||||  || | ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  37321758 taatgttagccaataaaatctcagtctagccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatct 37321659  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    || |||||||| | |||||| | |||||||||| |||||| ||||||||||| ||||||| || |||||||||    
T  37321658 aaaggtgattattgtgccatttcattcttgaatatttctt-ataaaatcattcttgatatctagcattttcct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 2477736 - 2477906
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    ||||||||| || |||||| ||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||||||||| |||||     
T  2477736 taatgttagtcaataaaatttcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatct 2477835  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||| | | |||||||| ||||||  ||||||||| ||||||||||| ||||||| || ||||||||    
T  2477836 aaaggtgatcattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttcc 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 3521971 - 3521801
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||| ||| |||||||| |   ||| ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  3521971 taatgttaaccaataaaatcttagtttggccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatcta 3521872  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    | |||||||| | |||||||| |||||| ||| |||||| ||||||||||| ||||||| || |||||||||    
T  3521871 aaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 11361096 - 11360947
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta-nnnnnnnnnatgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||| | |||||     
T  11361096 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatct 11360997  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcat 150  Q
    || | |||||| | |||||||| ||||||||||||||||| ||||||||||    
T  11360996 aaagatgattattgtgccatgtcattcttgaatctttctt-ataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 12850901 - 12851069
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta--nnnnnnnnnatgataggttaataaataagactaaaatc 98  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||           |||| || ||||||||| ||||| |||||    
T  12850901 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatc 12851000  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattt 168  Q
     || |||| ||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || |||||    
T  12851001 taaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 14138739 - 14138672
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||||||||    
T  14138739 aagggtgattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatataacatt 14138672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 22913040 - 22913115
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||| |||||||| |||||| || |||||||||| ||||    
T  22913040 taaaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 2477715 - 2477640
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  2477715 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 6043497 - 6043572
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| ||| |||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  6043497 taaaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 11361117 - 11361192
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  11361117 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 12614719 - 12614794
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| | || ||||| |||||||||||||||||||||||||  || |||||||||| ||||    
T  12614719 taaaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 38899613 - 38899520
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||||| ||||| ||||| || |||| ||| | |||||||| |||||||||| ||| || ||||||||||| ||||||| || ||||||||    
T  38899613 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttcc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 3362857 - 3362782
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||| ||| |||||||||| ||||||| |  ||||||||||||||| || |||||||||| ||||    
T  3362857 taaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 3362782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 3521992 - 3522067
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| || |||||||| |||||||||| ||| |||||  |||||||| |||||| || |||||||||||||||    
T  3521992 taaaatctaatggtgattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacatt 3522067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 4892281 - 4892206
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  |||||||| |||||| || |||||||||| ||||    
T  4892281 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 25398317 - 25398242
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  |||||||| |||||| || |||||||||| ||||    
T  25398317 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 25398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 31640926 - 31640977
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgata 143  Q
    ||||||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  31640926 taaaatctaagggtggttattctgccatgtcattcttgaatctttcttgata 31640977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 38899712 - 38899787
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||| ||| |||||||||| ||||||| |  ||||||||||||||| || |||||||||| ||||    
T  38899712 taaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 38899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 3362878 - 3363048
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta--nnnnnnnnnatgataggttaataaataagactaaaatc 98  Q
    |||||||| ||| ||||||||||  |||| ||||||| |||||||| |||||||||||||           |||| || ||||||||| ||||| |||||    
T  3362878 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatc 3362977  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttc 170  Q
     || |||| ||| | || ||||| |||||| ||| |||||| ||||||||||| ||||||| || |||||||    
T  3362978 taaaggtggttattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 4433993 - 4434068
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||| | |||||||||  |||||| | |||||| || |||||||||| ||||    
T  4433993 taaaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 12850880 - 12850805
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||| ||| |||||||||| ||| ||| |  ||||||||||||||| || |||||||||| ||||    
T  12850880 taaaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcatt 12850805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 13664737 - 13664792
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatc 133  Q
    ||||||||||||||| ||||| ||||||||||| |||  ||||| |||||||||||    
T  13664737 ttaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 33584323 - 33584390
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||| ||  |||||||| |||||| || |||||||||| ||||    
T  33584323 aagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33584390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36880288 - 36880229
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| |||||| |||  |||||||||||||||||| || ||| |||||||||    
T  36880288 taatgttagccaataaaatttcagtctggtcggaaattatgggatggtggatgttatgta 36880229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 10458465 - 10458421
Alignment:
Q  103 ggtgattaatctgccatgtgattcttgaatctttcttgataaaat 147  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||    
T  10458465 ggtgattattttgccatgtcattcttgaatttttcttgataaaat 10458421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 37321787 - 37321835
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatc 148  Q
    ||||||||||| |||||||||| |||||| ||  |||||||||||||||    
T  37321787 aagggtgattattctgccatgtcattcttaaaattttcttgataaaatc 37321835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 37219801 - 37219904
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    |||| |||||||||||||||| | ||||| |||| |||||| |||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  170 cctt 173  Q
    ||||    
T  37219901 cctt 37219904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 173
Target Start/End: Complemental strand, 11314142 - 11314044
Alignment:
Q  75 aggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||||||||||||||||||| |||| ||||||||||| | || ||||| ||||||| ||||||||||||||||||||| ||||||| || ||||||||||    
T  11314142 aggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcctt 11314044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 36073450 - 36073619
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||| ||| |||||||||| ||||  ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  36073450 taatgttaaccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatcta 36073549  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  36073550 aaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 42671769 - 42671939
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||| ||| ||||||||||   ||| ||||||||||||||||||| |||||||||          | || ||||||| |||| ||||| ||||| |    
T  42671769 taatgttaaccaataaaatctcaatttggccggaaattatggggtgatgagtgttatgtttttttttttacgaaaggttaacaaatgagactcaaatcta 42671868  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||  |||||| | || ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  42671869 agaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 46441944 - 46442117
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  46441944 taatgttaaccaataaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 46442043  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || |||||||||||    
T  46442044 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctta 46442117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 7745077 - 7744906
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| |  ||||||||| ||| | |||||     
T  7745077 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatct 7744978  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    || |||||||| | ||| |||| ||||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  7744977 aaaggtgattattgtgcaatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 21802287 - 21802114
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgg---gtgttatgtannnnnnnnnatgataggttaataaataagactaaaat 97  Q
    |||||||||||| ||||||||||  |||| ||||||| |||||||| |||   ||||||||||         |||| || ||||||||| ||||| ||||    
T  21802287 taatgttagccaataaaatctcagtctggccggaaatcatggggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaat 21802188  T
Q  98 caaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    | ||||||||||| | || ||||| ||||||||||||||||| ||||||||||| ||||||| || |||||||||    
T  21802187 ctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 22199361 - 22199531
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||| ||||| | ||||| ||||| || |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  22199361 taatgttagccaataaaatctcagcctggccagaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 22199459  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    | |||||||| | |||||||| ||||||| ||||||||| ||||||||||| ||||||| || ||||||||||    
T  22199460 aaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcctt 22199531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 30563309 - 30563452
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    ||||||| |||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| |||||||||||||||||| |||||     
T  30563309 taatgttggccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatct 30563408  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgata 143  Q
    ||| ||||||| | || ||||| |||||||||||||||||||||    
T  30563409 aagtgtgattattgtgtcatgtcattcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 50156543 - 50156373
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  50156543 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 50156444  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    |||| |||||| | || ||||| |||||||||| |||||| ||||||||||| ||||||| ||||||||||||    
T  50156443 aagg-tgattattatgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacattttcct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 37934906 - 37934735
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||| ||| ||||||||||  |||||||||||||||||| || ||| |||||||||         |||| |||||||||||| ||| | ||||| |    
T  37934906 taatgttaaccaataaaatctcagtctggtcggaaattatgggatggtggttgttatgtatttttttttatgaaaggttaataaatgagattgaaatcta 37934807  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    |||||||||| | || ||| | ||| ||||||||||||| ||||||||| |  | |||| ||||||||||||    
T  37934806 agggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttcct 37934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 17655530 - 17655699
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttat--gtannnnnnnnnatgataggttaataaataagactaaaatc 98  Q
    |||||||||||| |||||||||| ||||| ||||||| ||||| |||||||||||||  |||         |||| |||||||||||| ||||| |||||    
T  17655530 taatgttagccaataaaatctcagcctggccggaaatcatgggatgatgggtgttatatgtatttttttt-atgaaaggttaataaatgagactgaaatc 17655628  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
     || ||| |||| | || ||||| |||||| |||||||||||||||||||||| || |||| || ||||||    
T  17655629 taaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 33530674 - 33530749
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||||| || |||||||||| ||||    
T  33530674 taaaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 53123131 - 53123304
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| ||||||||||  |||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  53123131 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatct 53123230  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
    || | |||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || |||||||||||    
T  53123231 aaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctta 53123304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9088970 - 9089138
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta-nnnnnnnnnatgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  9088970 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatct 9089069  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    || | |||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||    
T  9089070 aaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31078784 - 31078612
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta-nnnnnnnnnatgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| ||||||||||||||||||||||          |||| || ||||||||| ||| | |||||     
T  31078784 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatct 31078685  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    || | |||||| | |||||||| |||||||||| ||| || ||||||||||| ||||||| || ||||||||||    
T  31078684 aaagatgattattgtgccatgtcattcttgaat-tttttttataaaatcattcttgatatctagcattttcctt 31078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 47290166 - 47290338
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| ||  |||||||| ||||| |||||     
T  47290166 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatct 47290265  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    || |||||||| | | |||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||||    
T  47290266 aaaggtgattattgtaccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 47290338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 2625015 - 2625111
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttccttat 175  Q
    ||||||||| ||||| ||||| || |||||||| | ||| |||| ||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  2625015 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttctt-ataaaatcattcttgatatctaacattttccttat 2625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 49387853 - 49387679
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn--atgataggttaataaataagactaaaatc 98  Q
    |||||||| ||| |||||||||| ||| | ||||||| |||||||| ||| |||||||||           |||| || ||||||||| ||||| |||||    
T  49387853 taatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatc 49387754  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
     || |||||||| | |||||||| |||||||||| |||||| ||||||||||  ||||||| ||||||||||||||    
T  49387753 taaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcatccttgatatctaacattttcctta 49387679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 10442754 - 10442581
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatg--tannnnnnnnnatgataggtt-aataaataagactaaaat 97  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||  |           ||| || || ||||||| ||||| ||||    
T  10442754 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaat 10442655  T
Q  98 caaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    | || |||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||| || |||||||||    
T  10442654 ctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 10442775 - 10442850
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  10442775 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  104 gtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 31078805 - 31078880
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  31078805 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 36073129 - 36073227
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttccttatct 177  Q
    ||||||||| ||||| ||||| || |||| ||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||||||||    
T  36073129 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatcatttttgatatctagcattttccttatct 36073227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 49387874 - 49387949
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  49387874 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 42671748 - 42671678
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatata 162  Q
    ||||||| ||||||||||| |||||||||| |||||| ||| ||| ||||||||||| |||||||||||||    
T  42671748 taaaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatata 42671678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 4751546 - 4751720
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta--nnnnnnnnnatgataggttaataaataagactaaaatc 98  Q
    |||||||| ||| ||||||||||  |||||||||||| |||||||| |||||||||||||           |||| || ||||||||| ||||| |||||    
T  4751546 taatgttaaccaataaaatctcagtctggtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatc 4751645  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
     || |||| ||| | |||||||| |||||| ||| |||||| ||||||| ||| ||||||| || |||||||||||    
T  4751646 taaaggtggttattgtgccatgtcattcttaaatttttctt-ataaaattattcttgatatctagcattttcctta 4751720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 33530571 - 33530479
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||||||||||| ||||| || |||||||| | |||||||| ||||||| |||||| || ||||||||||| ||||||| || ||||||||    
T  33530571 ttaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttt-tttataaaatcattcttgatatctagcattttcc 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 44893178 - 44893007
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| || |||| ||||| || |||||||||||||          |||| || ||||||||| ||||| |||||     
T  44893178 taatgttaaccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 44893079  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    || |||||||| | |||||||| |||||| ||| |||||| ||||||||||| ||||||| || |||||||||    
T  44893078 aaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 44893526 - 44893696
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| || |||| ||||| || |||||||||||||          |||| || ||||||||| ||||| |||||     
T  44893526 taatgttaaccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 44893625  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | |||||||| |||||| ||| |||||| ||||||||||| ||||||| || ||||||||    
T  44893626 aaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 2624916 - 2624841
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||| | |||||||||  ||||||||||||||| || |||||||||| ||||    
T  2624916 taaaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 7745098 - 7745173
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  7745098 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 21802308 - 21802383
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||  || |||||||||| ||||    
T  21802308 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 22199340 - 22199265
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| |||| |||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  22199340 taaaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 23964451 - 23964526
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||| ||||||||||| || |||||||||||||||    
T  23964451 taaaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacatt 23964526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 24392738 - 24392671
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||||||| |||||||| |||||| || |||||||||| ||||    
T  24392738 aagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 36073026 - 36072951
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||| ||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  36073026 taaaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 47290145 - 47290070
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  |||||||| |||||| || |||||||||| ||||    
T  47290145 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 36073349 - 36073276
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcatt 151  Q
    ||||||||||||||| ||||| ||| || |||| |||| ||| | |||||| ||||||||||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatt 36073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 44744605 - 44744698
Alignment:
Q  73 ataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttc 170  Q
    |||||||||||||||||||| ||||| |||| | |||| |  | ||||| |||||||||    |||||||||||||||| ||||||| ||||||||||    
T  44744605 ataggttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaa----tcttgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 4751525 - 4751450
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||| ||| |||||||||| ||||||| |  ||||||||||||||| || |||||||||| ||||    
T  4751525 taaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 4751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 24128339 - 24128512
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| ||| |||||||||          |||| || ||||||||| ||||| |||||     
T  24128339 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 24128438  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
    || ||| |||| | || ||||| |||||| ||| |||||| ||||||||||| ||||||| || |||||| ||||    
T  24128439 aaaggtaattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttttctta 24128512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 36073421 - 36073354
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||||||  |||||||| |||||| || |||||||||| ||||    
T  36073421 aagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 44893505 - 44893430
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||| |||| |||||| || |||||||||| ||||    
T  44893505 taaaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcatt 44893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 53123110 - 53123034
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttc-ttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  |||| |||| |||||| || |||||||||| ||||    
T  53123110 taaaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcatt 53123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 9088949 - 9088898
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgata 143  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||    
T  9088949 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36073047 - 36073106
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||| ||| ||||||||||  |||| ||||||| |||||||| |||||||||||||    
T  36073047 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 36073106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 46441923 - 46441848
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| | |||||||| |||||||||  |||||| | |||||| || |||||||||| ||||    
T  46441923 taaaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 50156564 - 50156639
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  |||||||| |||||| || || ||||||| ||||    
T  50156564 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcatt 50156639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    ||||||| ||||| ||||| |||| |||||| | ||| |||| |||||| ||| ||||||||| |||||||| ||||||| || ||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgat-aaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 53999020 - 53998979
Alignment:
Q  130 aatctttcttgataaaatcattattgatatataacattttcc 171  Q
    |||||||||||||||||||||| ||||||| ||| |||||||    
T  53999020 aatctttcttgataaaatcattcttgatatctaatattttcc 53998979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 44893199 - 44893275
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttg-aatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||| ||| |||| |||||| || || ||||||| ||||    
T  44893199 taaaatctaagggtgattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcatt 44893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 29693615 - 29693719
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    |||| ||| |||||||||||||| ||||| |||||| |||| |||||||||| |||||| |||||||||||||||||||||| ||||||| || ||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  170 cctta 174  Q
    |||||    
T  29693715 cctta 29693719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18365538 - 18365369
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||  |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  18365538 taatgttagccaataaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 18365439  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | |||||||| | ||| |||| ||||||| ||||||||| ||||||||||| ||||||| || ||||||||    
T  18365438 aaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18370802 - 18370633
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||  |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  18370802 taatgttagccaataaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 18370703  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | |||||||| | ||| |||| ||||||| ||||||||| ||||||||||| ||||||| || ||||||||    
T  18370702 aaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28675248 - 28675420
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||| | |||||||||| ||||| ||||||| |||||||| |||| ||||||||          |||| |||||||||||| ||||| |||||     
T  28675248 taatgttagctaataaaatctcagcctggccggaaatcatggggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatct 28675347  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||||||||||| | || ||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||||    
T  28675348 aagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 28675420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 33696796 - 33696970
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn--atgataggttaataaataagactaaaatc 98  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||           |||| || ||||||||| ||||| |||||    
T  33696796 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatc 33696895  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
     || |||||||| | |||||||| |||||| |||||||||| ||||||||||| ||||||| || |||||||||||    
T  33696896 taaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcattttcctta 33696970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 2309388 - 2309218
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| | ||| ||||||| |||||||  |||||||||||||          |||| |||||||||||| ||||| |||||     
T  2309388 taatgttagccaataaaatctcagcttggccggaaatcatggggttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatct 2309289  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||||||| | |||||||| ||||||||||||||||| ||||||||||  ||||||| || ||||||||    
T  2309288 aagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatcgttgatatctagcattttcc 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 17175986 - 17175816
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  17175986 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 17175887  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | | |||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  17175886 aaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 17705430 - 17705262
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| ||||||||||  |||| ||||||| ||||| || |||||||||||||         |||| |||||||||||| ||||| ||||| |    
T  17705430 taatgttagccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgtaatttttt--atgaaaggttaataaatgagactgaaatcta 17705333  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||| |||||| | || ||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||||    
T  17705332 agg-tgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 17705262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 23291049 - 23290872
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn----atgataggttaataaataagactaaaa 96  Q
    |||||||| ||| |||||||||| ||||| | ||||| ||||||||||||||||||||||             |||| || ||||||||| ||||| |||    
T  23291049 taatgttaaccaataaaatctcagcctggccagaaatcatggggtgatgggtgttatgtattttcttttttttatgaaagattaataaatgagactgaaa 23290950  T
Q  97 tcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttccttat 175  Q
    || || ||| |||| | |||||| | ||||||||||||||||| ||||||||||| ||||||| || ||||||||||||    
T  23290949 tctaaaggtaattattgtgccatatcattcttgaatctttctt-ataaaatcatttttgatatctagcattttccttat 23290872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 8515691 - 8515556
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||| |||| |||||||| |||||||| ||| |||||||||         |||| | |||||||||||||||| ||||| |    
T  8515691 taatgttagccaataaaatctcagcctgatcggaaatcatggggtggtggatgttatgtatttttttttatgaaatgttaataaataagactgaaatcta 8515592  T
Q  101 agggtgattaatctgccatgtgattcttgaatcttt 136  Q
    || ||||||| ||| |||||| ||| || |||||||    
T  8515591 agagtgattattctaccatgtcatttttaaatcttt 8515556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9752210 - 9752151
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  9752210 taatgttagccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta 9752151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 33695313 - 33695388
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  33695313 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 33696775 - 33696700
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  33696775 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 11548474 - 11548381
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
    ||||||| ||||| ||||| ||||||||||| | |||||||| ||||||||||| |||||||| |||||||| ||||||| || |||||| ||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgat-aaatcattcttgatatctagcatttttctta 11548381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33695292 - 33695121
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta--nnnnnnnnnatgataggttaataaataagactaaaatc 98  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||           |||| || ||||||||| ||||| |||||    
T  33695292 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatc 33695193  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
     || |||||||| | || ||| | |||||| ||| |||||| ||||||||||| ||||||| || ||||||||    
T  33695192 taaaggtgattattgtgacatatcattcttaaatatttctt-ataaaatcattcttgatatctagcattttcc 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 6127354 - 6127279
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  6127354 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 23291070 - 23291145
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  23291070 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 11548574 - 11548644
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatata 162  Q
    ||||||| ||||||||||| |||||||||| |||||||||| |||||||| |||||  || ||||||||||    
T  11548574 taaaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatata 11548644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 18889595 - 18889466
Alignment:
Q  14 taaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaaagggtgattaatc 113  Q
    |||||||||| ||| | ||||||| |||||||| ||||| |||||||         |||| || ||||||||| ||||| ||||| || |||||||| |     
T  18889595 taaaatctcagccttgccggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 18889496  T
Q  114 tgccatgtgattcttgaatctttcttgata 143  Q
    |||||||| ||||||||||| |||||||||    
T  18889495 tgccatgtcattcttgaatcattcttgata 18889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 2121059 - 2121004
Alignment:
Q  116 ccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    |||||| |||||||||||||| || ||||||||||| ||||||| |||||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 8515723 - 8515786
Alignment:
Q  104 gtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||||| || |||||||||| ||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcatt 8515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 17176007 - 17176082
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||| ||||| |||||||||  ||| ||||||||||| || |||||||||| ||||    
T  17176007 taaaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 17705451 - 17705526
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||| ||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  17705451 taaaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 18365567 - 18365634
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||||||  ||| ||||||||||| || |||||||||| ||||    
T  18365567 aagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 18370831 - 18370898
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||||||||| |||||||||  ||| ||||||||||| || |||||||||| ||||    
T  18370831 aagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 28675227 - 28675152
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| || | ||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  28675227 taaaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 32702383 - 32702477
Alignment:
Q  78 ttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    ||||||||| ||||| ||||| || ||| |||| | || ||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||||    
T  32702383 ttaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 32702477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 6031706 - 6031547
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta--nnnnnnnnnatgataggttaataaataagactaaaatc 98  Q
    |||||||| ||| ||||||| || ||||| ||||||| |||||||| |||||||||||||           || | || ||||||||| ||||| |||||    
T  6031706 taatgttaaccaataaaatcccagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatc 6031607  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatat 159  Q
     || |||||||| | |||||||| |||||| ||||||| || ||||||||||| |||||||    
T  6031606 taaaggtgattattgtgccatgtcattcttaaatcttt-tttataaaatcattcttgatat 6031547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 9752231 - 9752283
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataa 144  Q
    ||||||| ||||||||||| |||||||| | |||||||||| |||||||||||    
T  9752231 taaaatctaagggtgattattctgccatatcattcttgaatttttcttgataa 9752283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 18889683 - 18889757
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| |||||| |||| |||||||||| |||||||||  ||||||||| ||||| || |||||||||| ||||    
T  18889683 taaaatctaagggttattattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25987030 - 25987089
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||| ||| ||||||||||  |||| ||||||| |||||||| |||||||||||||    
T  25987030 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 582600 - 582522
Alignment:
Q  94 aaatcaaagggtgattaatctgcc-atgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||| || |||||||| |||||| || | |||||| ||| |||||| ||||||||||| ||||||| |||||||||||    
T  582600 aaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  104 gtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttc 170  Q
    ||||||| | || ||||| ||||||||||||| ||||||||||||||| ||||||| || |||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatctt-cttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 32702284 - 32702216
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatata 160  Q
    ||||||| ||||||||||| |||||||| | |||||||||  |||| ||| |||||| || ||||||||    
T  32702284 taaaatctaagggtgattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatata 32702216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9293541 - 9293370
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn--atgataggttaataaataagactaaaatc 98  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||           |||| || ||||||||| ||||| |||||    
T  9293541 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatc 9293442  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
     ||||||||||| | || ||||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  9293441 taagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 22592880 - 22592985
Alignment:
Q  70 atgataggttaataaataagact--aaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    |||| ||||||||||||||||||  |||||| ||||||||||| | || ||||| ||||||||||||||||||||||||||||| ||||||| || ||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  168 ttcctt 173  Q
    ||||||    
T  22592980 ttcctt 22592985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 33380307 - 33380477
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnna-tgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||         | ||| || ||||||||| ||||| |||||     
T  33380307 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatct 33380406  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  33380407 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 35160857 - 35161029
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn---atgataggttaataaataagactaaaat 97  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||            |||| || ||||||||| ||||| ||||    
T  35160857 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaat 35160956  T
Q  98 caaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  35160957 ctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 9723586 - 9723677
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    ||||||||||||| ||||| || |||||||| |||| ||||| |||||| ||| ||||||||| |||||||| ||||||| |||||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 14941352 - 14941427
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||||| |||||||| || |||||||||| ||||    
T  14941352 taaaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7475473 - 7475303
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta-nnnnnnnnnatgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  7475473 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 7475374  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | || ||| | |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  7475373 aaaggtgattattatgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 23268027 - 23267857
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| ||||||||||  |||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  23268027 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 23267928  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | |||||||| |||||| ||| |||||| ||||||||||| ||||||| || ||||||||    
T  23267927 aaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 9293562 - 9293637
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  9293562 taaaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 31174820 - 31174895
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  |||||| |||||||| || |||||||||||||||    
T  31174820 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacatt 31174895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 10661987 - 10662158
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn--atgataggttaataaataagactaaaatc 98  Q
    |||||||| ||| |||||||||| ||||| ||||||| || ||||| |||||||||||||           |||| || ||||||||| ||||| |||||    
T  10661987 taatgttaaccaataaaatctcagcctggccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatc 10662086  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
     || |||||||| | || ||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  10662087 taaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 13354946 - 13355120
Alignment:
Q  1 taatgttagccagtaaaatctc-atcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn--atgataggttaataaataagactaaaat 97  Q
    |||||||||||| ||||||||| | ||||| ||||||| |||| ||| |||||||||||||           |||| || ||||||||| ||||| ||||    
T  13354946 taatgttagccaataaaatctctagcctggccggaaatcatggagtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaat 13355045  T
Q  98 caaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    | ||  ||||||| | |||||||| ||||||| ||||||||| ||||||||||| ||||||| || ||||||||||    
T  13355046 ctaaaagtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcctt 13355120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 3989176 - 3989334
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta-nnnnnnnnnatgataggttaataaataagactaaaatca 99  Q
    |||||||||||| ||||||||||  |||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  3989176 taatgttagccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 3989275  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatat 159  Q
    || ||| |||| | || ||||| ||||||| ||||||||| ||||||||||| |||||||    
T  3989276 aaaggttattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatat 3989334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 31174799 - 31174633
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| ||||||||||  |||  ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||| | ||||| |    
T  31174799 taatgttagccaataaaatctcagtctgaccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatcta 31174700  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattt 168  Q
    | || | ||| | || ||||| ||||||||||||||||| ||||||||||| ||||||| || |||||    
T  31174699 aaggagtttattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcct 172  Q
    ||||||| ||||| ||||| || |||||||| | | |||||| |||||||||||||||||||| |||||||| ||||||| || |||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 10661966 - 10661891
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  10661966 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 13354925 - 13354850
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| |||||| |||| |||||||| | |||||||||  ||||||||||||||| || |||||||||||||||    
T  13354925 taaaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacatt 13354850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 21936160 - 21936085
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||| | |||||||||  ||||||||||||||| || |||||||||| ||||    
T  21936160 taaaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 23268048 - 23268123
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  |||||||| |||||| || |||||||||| ||||    
T  23268048 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 35160836 - 35160761
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||||||||||||||| || |||||||||| ||||    
T  35160836 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 43330991 - 43330916
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||| ||| |||| |||||| || |||||||||| ||||    
T  43330991 taaaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 16767357 - 16767285
Alignment:
Q  70 atgataggttaataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgat 142  Q
    |||| |||||||||||| ||||| ||||| ||| ||||||| | || ||||| ||||||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 40262701 - 40262642
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||| ||||||| |||||||||| ||||  |||||||||||||||| |||||||||||||    
T  40262701 taatattagccaataaaatctcaccctgaccggaaattatggggtggtgggtgttatgta 40262642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcat 150  Q
    ||||||| ||||| ||||| ||||||||||| | || ||||| ||| || |||||||||||||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 21936181 - 21936325
Alignment:
Q  1 taatgttagccagtaaaatctc-atcctggtcggaaattatggggtgatgggtgttatgta-nnnnnnnnnatgataggttaataaataagactaaaatc 98  Q
    |||||||||||| ||||||||| | ||||| ||||||| |||||||| |||||||||||||          |||| || ||||||||| | ||| |||||    
T  21936181 taatgttagccaataaaatctctagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatc 21936280  T
Q  99 aaagggtgattaatctgccatgtgattcttgaatctttcttgata 143  Q
     || |||||||| | |||||||| ||||||| ||| |||||||||    
T  21936281 taaaggtgattattgtgccatgtcattcttggatcattcttgata 21936325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 27847711 - 27847655
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatc 148  Q
    ||||||| || |||||||| |||| ||||| ||||||||||||||||| ||||||||    
T  27847711 taaaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatc 27847655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 7475494 - 7475569
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||  ||||| |||||||||  |||||||| |||||| || |||||||||| ||||    
T  7475494 taaaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 9723476 - 9723409
Alignment:
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||||||| |||| ||||| |||||| |||||||||| |||||||| || || ||||||| ||||    
T  9723476 aagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16767437 - 16767378
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgta 60  Q
    |||||||||||| ||||||||||  |||| ||||||| || ||||| |||||||||||||    
T  16767437 taatgttagccaataaaatctcagtctggccggaaatcatagggtggtgggtgttatgta 16767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 21393674 - 21393749
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| ||| |||||| |||||| ||| |||||||| |||||  || |||||||||| ||||    
T  21393674 taaaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcatt 21393749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 33380286 - 33380211
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| || ||||||| |||||| ||  |||||||| |||||| || |||||||||| ||||    
T  33380286 taaaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33380211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  80 aataaataagactaaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatttt 169  Q
    ||||||| ||||| ||||  ||||||||||| | || ||||| |||||||||| ||||||||| |||||||| ||||||| || ||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgat-aaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 41111 - 41280
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  41111 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 41210  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | |||||||| | | |||| | ||||||| ||||||||| ||||||||||| ||||||| || ||||||||    
T  41211 aaggtgattattgtaccatatcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 41280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 41090 - 41015
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||| ||||||||||| || |||||||||| ||||    
T  41090 taaaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 47950 - 48119
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnnatgataggttaataaataagactaaaatcaa 100  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| |||||||||||||         |||| || ||||||||| ||||| ||||| |    
T  47950 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatcta 48049  T
Q  101 agggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    | | |||||| | ||| |||| ||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  48050 aagatgattattgtgctatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 47929 - 47854
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || |||||| ||| ||||    
T  47929 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 47; Significance: 6e-18; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 26036 - 26208
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| ||||||||||  |||| ||||||| ||||| || |||||||||||||          |||| || ||||||||| ||||| |||||     
T  26036 taatgttaaccaataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 26135  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    || |||||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||||    
T  26136 aaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 26208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 16084 - 16256
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| ||||||||||  |||| ||||||| ||||| || |||||||||||||          |||| || ||||||||| ||||| |||||     
T  16084 taatgttaaccaataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 16183  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctt 173  Q
    || | |||||| | |||||||| |||||||||| |||||| ||||||||||| ||||||| || ||||||||||    
T  16184 aaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 16256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 8481 - 8413
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatata 160  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || ||||||||    
T  8481 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

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Target: scaffold0228; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 16063 - 15995
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatata 160  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || ||||||||    
T  16063 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

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Target: scaffold0228; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 26015 - 25947
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatata 160  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||| || ||||||||    
T  26015 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

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Target: scaffold0178 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11721 - 11891
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| || |||| |||||||| || ||||||||||          |||| || ||||||||| ||||| |||||     
T  11721 taatgttaaccaataaaatctcagcctggccgaaaatcatggggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 11820  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | |||||||| |||||| ||| |||||| ||||||||||| ||||||| |||||||||||    
T  11821 aaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattttcc 11891  T

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Target: scaffold0178; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 11700 - 11625
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||| ||||| |||||||||  ||||||||||||||| || |||||||||| ||||    
T  11700 taaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

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Target: scaffold0204 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 4496 - 4666
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| || |||| |||||||| |||||||||||||          |||| || ||||||||| ||||| |||||     
T  4496 taatgttaaccaataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatct 4595  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcc 171  Q
    || |||||||| | |||||| | |||||| ||| |||||| ||||||||||| ||||||| || ||||||||    
T  4596 aaaggtgattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 4666  T

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Target: scaffold0204; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 4475 - 4400
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  |||||||| |||||| || |||||||||| ||||    
T  4475 taaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4400  T

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Target: scaffold0665 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 3147 - 3072
Alignment:
Q  92 taaaatcaaagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacatt 167  Q
    ||||||| ||||||||||| |||||||||| |||||| ||  ||| ||||||||||| || |||||||||| ||||    
T  3147 taaaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 3072  T

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Target: scaffold0471 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 12942 - 13115
Alignment:
Q  1 taatgttagccagtaaaatctcatcctggtcggaaattatggggtgatgggtgttatgtannnnnnnnn-atgataggttaataaataagactaaaatca 99  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||| ||| |||||||||          |||| || ||||||||| ||||| |||||     
T  12942 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 13041  T
Q  100 aagggtgattaatctgccatgtgattcttgaatctttcttgataaaatcattattgatatataacattttcctta 174  Q
    || ||| |||| | || ||||| |||||| ||| |||||| ||||||||||| ||||||| || |||||| ||||    
T  13042 aaaggtaattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttttctta 13115  T

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