View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19496_low_1 (Length: 552)

Name: NF19496_low_1
Description: NF19496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19496_low_1
NF19496_low_1
[»] chr7 (92 HSPs)
chr7 (13-552)||(1286184-1286723)
chr7 (204-498)||(35214811-35215107)
chr7 (183-496)||(5805022-5805337)
chr7 (189-495)||(5559454-5559751)
chr7 (184-494)||(33235019-33235331)
chr7 (184-498)||(8039648-8039945)
chr7 (189-473)||(5559097-5559385)
chr7 (207-501)||(20183778-20184070)
chr7 (189-473)||(39959042-39959328)
chr7 (204-473)||(28256498-28256770)
chr7 (189-473)||(27995051-27995337)
chr7 (189-490)||(28256778-28257071)
chr7 (189-501)||(20366039-20366351)
chr7 (183-495)||(39958671-39958975)
chr7 (344-498)||(1348788-1348942)
chr7 (189-474)||(35215171-35215458)
chr7 (250-450)||(23679402-23679603)
chr7 (189-331)||(21433134-21433276)
chr7 (184-306)||(31893493-31893615)
chr7 (182-331)||(33879508-33879657)
chr7 (206-480)||(42990507-42990783)
chr7 (203-331)||(40904695-40904823)
chr7 (209-501)||(42990838-42991122)
chr7 (189-451)||(20366407-20366672)
chr7 (249-472)||(31175804-31176031)
chr7 (186-340)||(19925321-19925475)
chr7 (288-494)||(27995405-27995615)
chr7 (204-320)||(21412931-21413047)
chr7 (206-469)||(1349001-1349269)
chr7 (181-501)||(10620071-10620365)
chr7 (189-393)||(1441368-1441567)
chr7 (189-322)||(21412856-21412989)
chr7 (189-306)||(31893240-31893357)
chr7 (250-414)||(10619851-10620017)
chr7 (373-463)||(5075459-5075549)
chr7 (203-321)||(23150643-23150761)
chr7 (249-480)||(33235393-33235626)
chr7 (203-324)||(5805593-5805713)
chr7 (189-321)||(36566268-36566400)
chr7 (184-319)||(4187491-4187626)
chr7 (186-340)||(34951215-34951368)
chr7 (203-473)||(8040009-8040266)
chr7 (189-340)||(1346470-1346617)
chr7 (206-340)||(6220359-6220492)
chr7 (198-340)||(21413093-21413234)
chr7 (207-340)||(20101831-20101962)
chr7 (203-286)||(40904755-40904838)
chr7 (188-306)||(22876871-22876988)
chr7 (207-319)||(36566346-36566458)
chr7 (198-313)||(34951472-34951587)
chr7 (373-480)||(5805395-5805502)
chr7 (203-274)||(5805583-5805654)
chr7 (203-274)||(31175946-31176017)
chr7 (203-274)||(35214871-35214942)
chr7 (203-357)||(1286769-1286922)
chr7 (203-296)||(33879483-33879576)
chr7 (262-331)||(40904694-40904763)
chr7 (373-473)||(1441133-1441233)
chr7 (206-274)||(10619867-10619935)
chr7 (424-494)||(1441300-1441368)
chr7 (442-501)||(23679264-23679323)
chr7 (250-340)||(4187673-4187763)
chr7 (204-274)||(4187679-4187749)
chr7 (202-319)||(21433278-21433396)
chr7 (372-501)||(29590914-29591050)
chr7 (204-306)||(34951419-34951521)
chr7 (262-324)||(36566281-36566343)
chr7 (198-323)||(19925104-19925228)
chr7 (262-331)||(31893528-31893597)
chr7 (250-330)||(21433328-21433408)
chr7 (206-296)||(5075355-5075444)
chr7 (204-306)||(19925170-19925271)
chr7 (203-277)||(21433208-21433282)
chr7 (188-250)||(36566526-36566588)
chr7 (185-274)||(27995569-27995658)
chr7 (184-277)||(29591103-29591195)
chr7 (263-331)||(21412870-21412938)
chr7 (203-311)||(31893437-31893536)
chr7 (204-284)||(41020163-41020242)
chr7 (264-319)||(1441011-1441066)
chr7 (203-274)||(33235541-33235612)
chr7 (204-258)||(1441011-1441065)
chr7 (266-336)||(5075355-5075425)
chr7 (266-324)||(31893257-31893315)
chr7 (262-318)||(23150642-23150698)
chr7 (368-414)||(6220283-6220329)
chr7 (426-480)||(20184124-20184178)
chr7 (262-344)||(28104300-28104382)
chr7 (262-331)||(5805646-5805714)
chr7 (206-255)||(23679539-23679587)
chr7 (262-331)||(34951514-34951583)
chr7 (244-277)||(36566454-36566487)
[»] chr2 (55 HSPs)
chr2 (182-498)||(36196327-36196643)
chr2 (189-501)||(27893381-27893695)
chr2 (189-501)||(19080618-19080932)
chr2 (189-330)||(31263913-31264055)
chr2 (231-501)||(20535780-20536046)
chr2 (189-331)||(30907064-30907205)
chr2 (254-496)||(39301371-39301614)
chr2 (203-480)||(11871592-11871871)
chr2 (254-498)||(15506040-15506288)
chr2 (175-340)||(31264142-31264309)
chr2 (183-321)||(34336276-34336414)
chr2 (259-474)||(20535501-20535719)
chr2 (179-323)||(16781049-16781194)
chr2 (189-321)||(30907316-30907449)
chr2 (263-480)||(15506346-15506565)
chr2 (184-324)||(34336019-34336159)
chr2 (189-334)||(32341382-32341528)
chr2 (203-319)||(30907137-30907253)
chr2 (207-322)||(8260392-8260507)
chr2 (189-419)||(27893024-27893247)
chr2 (203-312)||(34429684-34429793)
chr2 (203-311)||(34336226-34336334)
chr2 (204-306)||(41265262-41265364)
chr2 (384-498)||(42116904-42117018)
chr2 (189-277)||(37543126-37543214)
chr2 (203-306)||(31263988-31264091)
chr2 (207-276)||(19081055-19081124)
chr2 (203-306)||(39301841-39301944)
chr2 (203-268)||(16781044-16781109)
chr2 (208-306)||(37542956-37543053)
chr2 (266-331)||(37543132-37543197)
chr2 (214-319)||(39376351-39376456)
chr2 (189-274)||(42117196-42117281)
chr2 (198-274)||(15506494-15506570)
chr2 (207-274)||(34336102-34336169)
chr2 (262-331)||(16781101-16781171)
chr2 (189-251)||(21813195-21813257)
chr2 (264-318)||(41265310-41265364)
chr2 (267-324)||(19081067-19081124)
chr2 (262-331)||(34429683-34429752)
chr2 (262-315)||(39301892-39301945)
chr2 (250-306)||(5116895-5116951)
chr2 (263-311)||(21813209-21813257)
chr2 (203-250)||(5116908-5116955)
chr2 (204-274)||(20535506-20535577)
chr2 (373-480)||(39301674-39301781)
chr2 (189-324)||(39376406-39376540)
chr2 (188-250)||(16780927-16780989)
chr2 (184-234)||(20537475-20537525)
chr2 (290-331)||(16103258-16103299)
chr2 (427-480)||(27893273-27893326)
chr2 (244-277)||(31264091-31264124)
chr2 (206-270)||(15505960-15506024)
chr2 (203-255)||(15506049-15506101)
chr2 (196-240)||(41265105-41265149)
[»] chr5 (59 HSPs)
chr5 (179-501)||(20728508-20728831)
chr5 (189-501)||(5734802-5735114)
chr5 (189-494)||(19278695-19279001)
chr5 (195-490)||(36417882-36418173)
chr5 (189-480)||(36418239-36418534)
chr5 (195-495)||(13543080-13543384)
chr5 (184-485)||(18248943-18249246)
chr5 (199-480)||(30737740-30738023)
chr5 (189-473)||(13543450-13543736)
chr5 (183-480)||(20728886-20729175)
chr5 (204-501)||(30738077-30738377)
chr5 (182-501)||(35189897-35190208)
chr5 (263-501)||(32459675-32459915)
chr5 (189-324)||(18951293-18951428)
chr5 (189-480)||(5734453-5734747)
chr5 (188-480)||(35190263-35190547)
chr5 (203-473)||(1722504-1722769)
chr5 (266-495)||(18237919-18238139)
chr5 (264-498)||(35891086-35891320)
chr5 (204-496)||(38405380-38405654)
chr5 (182-319)||(6336126-6336263)
chr5 (372-501)||(18321042-18321170)
chr5 (206-319)||(32660266-32660379)
chr5 (310-495)||(26275834-26276021)
chr5 (288-419)||(18238240-18238373)
chr5 (189-321)||(14235558-14235688)
chr5 (262-498)||(32459430-32459659)
chr5 (194-324)||(32660194-32660324)
chr5 (360-494)||(35890929-35891063)
chr5 (187-273)||(32459845-32459931)
chr5 (373-474)||(19279069-19279170)
chr5 (189-306)||(26275494-26275611)
chr5 (373-479)||(38405212-38405319)
chr5 (204-286)||(18951368-18951450)
chr5 (195-293)||(13538465-13538563)
chr5 (204-258)||(35891266-35891320)
chr5 (262-331)||(18951306-18951375)
chr5 (189-274)||(32459417-32459502)
chr5 (264-450)||(38082621-38082800)
chr5 (229-340)||(6336310-6336422)
chr5 (249-313)||(18321223-18321287)
chr5 (264-319)||(19279235-19279290)
chr5 (262-331)||(14235571-14235640)
chr5 (189-242)||(40744964-40745017)
chr5 (206-274)||(18237919-18237987)
chr5 (211-274)||(18238327-18238390)
chr5 (262-324)||(6336146-6336208)
chr5 (204-258)||(19279236-19279290)
chr5 (374-480)||(26275667-26275773)
chr5 (184-250)||(31813955-31814021)
chr5 (204-246)||(38082621-38082663)
chr5 (262-331)||(1722503-1722572)
chr5 (460-501)||(1722830-1722871)
chr5 (254-364)||(1722932-1723044)
chr5 (189-250)||(26276012-26276073)
chr5 (294-331)||(27510119-27510156)
chr5 (264-309)||(40744979-40745024)
chr5 (266-322)||(26275511-26275567)
chr5 (262-306)||(31813959-31814003)
[»] chr1 (48 HSPs)
chr1 (175-501)||(10686534-10686862)
chr1 (181-473)||(29418893-29419191)
chr1 (204-501)||(34254504-34254802)
chr1 (189-474)||(27351041-27351331)
chr1 (204-471)||(49650578-49650839)
chr1 (262-494)||(8903106-8903340)
chr1 (244-480)||(8902806-8903044)
chr1 (350-501)||(37663199-37663350)
chr1 (183-321)||(17898850-17898988)
chr1 (179-498)||(27351367-27351679)
chr1 (189-411)||(48352652-48352876)
chr1 (207-319)||(44964018-44964130)
chr1 (373-473)||(49650865-49650965)
chr1 (204-331)||(44964066-44964192)
chr1 (184-304)||(11897827-11897947)
chr1 (207-321)||(1765930-1766044)
chr1 (191-306)||(10685840-10685955)
chr1 (266-481)||(39302338-39302549)
chr1 (189-474)||(39302545-39302822)
chr1 (373-480)||(10686372-10686479)
chr1 (203-317)||(17898794-17898908)
chr1 (310-487)||(4772481-4772659)
chr1 (373-480)||(4772269-4772375)
chr1 (310-474)||(4030600-4030766)
chr1 (389-473)||(34254863-34254946)
chr1 (305-413)||(48352306-48352416)
chr1 (179-340)||(1765674-1765834)
chr1 (375-480)||(4030420-4030525)
chr1 (267-484)||(2965499-2965716)
chr1 (207-311)||(35701450-35701553)
chr1 (182-321)||(44963822-44963961)
chr1 (203-258)||(44964019-44964074)
chr1 (443-494)||(48352523-48352574)
chr1 (262-331)||(11897845-11897914)
chr1 (189-274)||(39302321-39302406)
chr1 (366-498)||(2965753-2965884)
chr1 (206-285)||(4030310-4030390)
chr1 (207-306)||(1765885-1765984)
chr1 (203-250)||(4772650-4772697)
chr1 (207-274)||(8902829-8902896)
chr1 (231-306)||(49651018-49651093)
chr1 (189-274)||(2965481-2965566)
chr1 (262-331)||(17898900-17898969)
chr1 (251-324)||(34254998-34255070)
chr1 (266-330)||(4030310-4030374)
chr1 (202-250)||(10685911-10685959)
chr1 (208-264)||(34254998-34255053)
chr1 (203-250)||(49650637-49650685)
[»] chr8 (72 HSPs)
chr8 (174-480)||(30576510-30576818)
chr8 (189-501)||(30576141-30576455)
chr8 (188-494)||(8713834-8714142)
chr8 (189-498)||(9276471-9276783)
chr8 (203-499)||(39700888-39701185)
chr8 (196-487)||(16197025-16197317)
chr8 (206-501)||(23553698-23553994)
chr8 (204-480)||(23553359-23553637)
chr8 (189-464)||(44041154-44041431)
chr8 (204-501)||(25729953-25730252)
chr8 (206-501)||(25737439-25737736)
chr8 (198-493)||(14871194-14871482)
chr8 (207-480)||(9276841-9277109)
chr8 (188-480)||(4613728-4614022)
chr8 (204-473)||(8714210-8714482)
chr8 (203-501)||(40553077-40553368)
chr8 (189-473)||(39701249-39701536)
chr8 (262-485)||(34686743-34686968)
chr8 (182-340)||(36359883-36360041)
chr8 (203-472)||(25737107-25737377)
chr8 (189-340)||(9770778-9770929)
chr8 (189-344)||(29794246-29794401)
chr8 (327-498)||(5358902-5359075)
chr8 (262-484)||(35434176-35434400)
chr8 (189-468)||(31169349-31169627)
chr8 (189-452)||(40552751-40553016)
chr8 (267-494)||(13771425-13771654)
chr8 (262-495)||(13771704-13771937)
chr8 (262-419)||(35433899-35434058)
chr8 (189-481)||(6236087-6236372)
chr8 (264-502)||(5358647-5358887)
chr8 (267-480)||(6235796-6236012)
chr8 (189-282)||(36314697-36314790)
chr8 (195-331)||(39700819-39700956)
chr8 (189-299)||(29792551-29792661)
chr8 (174-319)||(36360088-36360233)
chr8 (206-311)||(41190292-41190397)
chr8 (195-306)||(9770556-9770667)
chr8 (373-480)||(14871088-14871195)
chr8 (279-495)||(34686490-34686708)
chr8 (189-324)||(43422847-43422982)
chr8 (188-319)||(45017934-45018063)
chr8 (198-331)||(40553300-40553433)
chr8 (214-322)||(14870954-14871061)
chr8 (196-340)||(45017743-45017887)
chr8 (373-480)||(16197386-16197493)
chr8 (183-274)||(34686896-34686987)
chr8 (174-324)||(43423101-43423250)
chr8 (395-474)||(23179160-23179239)
chr8 (203-274)||(23553418-23553489)
chr8 (204-274)||(5358647-5358717)
chr8 (204-306)||(11113555-11113657)
chr8 (207-340)||(16208682-16208815)
chr8 (184-274)||(44040808-44040896)
chr8 (250-319)||(9770662-9770731)
chr8 (207-274)||(13771425-13771492)
chr8 (204-274)||(9276983-9277052)
chr8 (262-473)||(44040825-44041037)
chr8 (262-331)||(25737106-25737175)
chr8 (206-295)||(43423070-43423159)
chr8 (266-334)||(43422864-43422932)
chr8 (426-484)||(12684817-12684875)
chr8 (179-275)||(29030175-29030271)
chr8 (203-250)||(11113614-11113661)
chr8 (262-321)||(36360146-36360205)
chr8 (231-302)||(43422949-43423020)
chr8 (189-271)||(13771868-13771950)
chr8 (197-274)||(35433894-35433971)
chr8 (262-331)||(36314708-36314777)
chr8 (259-331)||(11113550-11113622)
chr8 (262-306)||(23179049-23179093)
chr8 (198-274)||(35434328-35434404)
[»] scaffold0027 (4 HSPs)
scaffold0027 (183-501)||(9378-9688)
scaffold0027 (189-305)||(9891-10007)
scaffold0027 (384-480)||(9743-9839)
scaffold0027 (263-331)||(9925-9993)
[»] chr3 (37 HSPs)
chr3 (189-493)||(21376556-21376862)
chr3 (189-495)||(31247470-31247778)
chr3 (189-498)||(4276125-4276437)
chr3 (361-493)||(35555811-35555943)
chr3 (360-493)||(14629497-14629630)
chr3 (184-474)||(35555511-35555806)
chr3 (344-501)||(53783022-53783179)
chr3 (188-410)||(3088013-3088228)
chr3 (181-286)||(50530228-50530333)
chr3 (264-480)||(31247192-31247409)
chr3 (310-402)||(33975015-33975109)
chr3 (373-480)||(53783234-53783341)
chr3 (298-495)||(21410134-21410332)
chr3 (310-463)||(14629327-14629481)
chr3 (189-480)||(21376861-21377133)
chr3 (263-486)||(24707471-24707696)
chr3 (373-474)||(3087215-3087316)
chr3 (266-402)||(19153884-19154023)
chr3 (189-302)||(3087072-3087184)
chr3 (206-319)||(54456799-54456912)
chr3 (183-331)||(54456847-54456995)
chr3 (184-274)||(54456656-54456746)
chr3 (203-250)||(14964737-14964784)
chr3 (451-495)||(3087383-3087427)
chr3 (188-255)||(24707456-24707523)
chr3 (204-274)||(31247192-31247261)
chr3 (250-306)||(4276633-4276689)
chr3 (204-275)||(5505728-5505800)
chr3 (244-331)||(5505732-5505820)
chr3 (191-286)||(14964635-14964729)
chr3 (263-306)||(14964737-14964780)
chr3 (203-258)||(54456800-54456855)
chr3 (206-274)||(19153884-19153953)
chr3 (238-275)||(42017017-42017054)
chr3 (264-313)||(50530251-50530300)
chr3 (204-248)||(3087146-3087190)
chr3 (264-340)||(54456676-54456752)
[»] chr6 (46 HSPs)
chr6 (189-501)||(17179961-17180273)
chr6 (189-498)||(24139332-24139641)
chr6 (175-501)||(11527512-11527831)
chr6 (181-489)||(2839607-2839899)
chr6 (187-501)||(10962726-10963042)
chr6 (206-480)||(17179631-17179906)
chr6 (195-484)||(28630463-28630745)
chr6 (203-414)||(10862494-10862708)
chr6 (183-324)||(16168690-16168831)
chr6 (181-331)||(32417451-32417601)
chr6 (181-331)||(32423292-32423442)
chr6 (262-472)||(9901962-9902174)
chr6 (189-324)||(20575402-20575537)
chr6 (188-474)||(2839908-2840187)
chr6 (203-473)||(11527893-11528165)
chr6 (189-340)||(32417696-32417847)
chr6 (189-340)||(32423537-32423688)
chr6 (184-306)||(9902282-9902404)
chr6 (203-306)||(16168648-16168751)
chr6 (189-306)||(16168455-16168572)
chr6 (207-311)||(32417537-32417641)
chr6 (207-311)||(32423378-32423482)
chr6 (264-495)||(10407568-10407802)
chr6 (203-274)||(17179688-17179759)
chr6 (250-320)||(20575600-20575670)
chr6 (263-495)||(10407313-10407543)
chr6 (262-318)||(10862653-10862709)
chr6 (297-449)||(17131619-17131773)
chr6 (206-298)||(20575672-20575763)
chr6 (210-454)||(9946582-9946818)
chr6 (373-480)||(17132060-17132166)
chr6 (262-324)||(16168468-16168530)
chr6 (207-275)||(10963161-10963229)
chr6 (203-251)||(32417593-32417641)
chr6 (203-251)||(32423434-32423482)
chr6 (203-274)||(20575476-20575547)
chr6 (203-258)||(20575602-20575657)
chr6 (189-239)||(17131551-17131601)
chr6 (262-331)||(11528097-11528166)
chr6 (262-331)||(20575415-20575484)
chr6 (198-274)||(9901958-9902034)
chr6 (425-473)||(28630345-28630393)
chr6 (207-250)||(9946718-9946761)
chr6 (266-315)||(9902333-9902382)
chr6 (244-277)||(16168615-16168648)
chr6 (424-480)||(10963094-10963150)
[»] chr4 (70 HSPs)
chr4 (198-500)||(52568020-52568320)
chr4 (204-493)||(52181720-52182011)
chr4 (189-498)||(8408685-8408994)
chr4 (262-498)||(19632070-19632306)
chr4 (194-480)||(31229249-31229533)
chr4 (209-501)||(19681203-19681492)
chr4 (204-409)||(5387131-5387338)
chr4 (354-501)||(31229588-31229735)
chr4 (262-496)||(42115894-42116129)
chr4 (189-331)||(26329999-26330141)
chr4 (182-322)||(9319993-9320133)
chr4 (204-340)||(26329930-26330066)
chr4 (183-321)||(43098414-43098552)
chr4 (207-306)||(2788932-2789031)
chr4 (310-414)||(44916227-44916333)
chr4 (206-324)||(2788974-2789092)
chr4 (262-473)||(52567746-52567958)
chr4 (189-293)||(19631753-19631857)
chr4 (249-340)||(22025103-22025194)
chr4 (189-310)||(35023736-35023857)
chr4 (183-295)||(2788774-2788886)
chr4 (196-324)||(22025301-22025428)
chr4 (208-316)||(35046437-35046545)
chr4 (281-494)||(42115654-42115869)
chr4 (373-480)||(52866205-52866311)
chr4 (250-480)||(8408393-8408625)
chr4 (189-340)||(43098172-43098319)
chr4 (184-331)||(41735738-41735884)
chr4 (298-494)||(44915937-44916134)
chr4 (184-310)||(23085220-23085345)
chr4 (188-306)||(52183441-52183559)
chr4 (203-306)||(43098369-43098472)
chr4 (203-284)||(41735816-41735897)
chr4 (189-274)||(52567733-52567818)
chr4 (189-306)||(52865946-52866063)
chr4 (267-436)||(5387506-5387677)
chr4 (244-319)||(26329808-26329883)
chr4 (373-480)||(52182010-52182116)
chr4 (184-274)||(36890636-36890726)
chr4 (206-271)||(9320077-9320142)
chr4 (426-495)||(30542849-30542918)
chr4 (198-274)||(19632235-19632310)
chr4 (263-331)||(52865960-52866028)
chr4 (203-274)||(26329936-26330007)
chr4 (253-340)||(35023963-35024050)
chr4 (264-340)||(36890630-36890706)
chr4 (183-258)||(2508246-2508321)
chr4 (203-258)||(26329827-26329882)
chr4 (263-318)||(35023750-35023805)
chr4 (203-258)||(52181779-52181834)
chr4 (204-274)||(8408407-8408477)
chr4 (190-321)||(36890399-36890533)
chr4 (189-271)||(42116060-42116142)
chr4 (266-331)||(9320017-9320082)
chr4 (206-291)||(22025274-22025358)
chr4 (197-250)||(44916324-44916377)
chr4 (204-256)||(35046493-35046545)
chr4 (264-331)||(2788795-2788862)
chr4 (203-250)||(41735876-41735923)
chr4 (373-411)||(19631934-19631972)
chr4 (238-320)||(35046550-35046632)
chr4 (266-331)||(2909182-2909247)
chr4 (206-251)||(2909242-2909287)
chr4 (262-323)||(52183484-52183545)
chr4 (264-320)||(2508267-2508323)
chr4 (207-259)||(8970834-8970886)
chr4 (180-224)||(22025047-22025091)
chr4 (267-331)||(22025353-22025417)
chr4 (207-247)||(23085172-23085212)
chr4 (206-250)||(30543141-30543185)
[»] scaffold0746 (2 HSPs)
scaffold0746 (203-498)||(359-655)
scaffold0746 (183-472)||(5-294)
[»] scaffold0070 (2 HSPs)
scaffold0070 (203-498)||(28548-28844)
scaffold0070 (373-472)||(28909-29007)
[»] scaffold0041 (3 HSPs)
scaffold0041 (203-331)||(45195-45323)
scaffold0041 (203-286)||(45180-45263)
scaffold0041 (262-331)||(45255-45324)
[»] scaffold0374 (3 HSPs)
scaffold0374 (262-485)||(16176-16399)
scaffold0374 (184-274)||(16158-16248)
scaffold0374 (288-495)||(16434-16642)
[»] scaffold0019 (4 HSPs)
scaffold0019 (189-324)||(124356-124491)
scaffold0019 (189-319)||(124133-124262)
scaffold0019 (203-285)||(124335-124417)
scaffold0019 (262-331)||(124146-124215)


Alignment Details
Target: chr7 (Bit Score: 508; Significance: 0; HSPs: 92)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 508; E-Value: 0
Query Start/End: Original strand, 13 - 552
Target Start/End: Original strand, 1286184 - 1286723
Alignment:
Q  13 attatacttcaaccctttttaataattttcttttattattgttttacatcacagctgctaattgtacatctaccgtcaattgtgtacatactccgtgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1286184 attatacttcaaccctttttaataattttcttttattattgttttacattacagctgctaattgtacatctaccgtcaattgtgtacatactccgtgtat 1286283  T
Q  113 gtcacctaccttgcctttgtgcgtgcaagatgaatgtgtatgcgtttaacagttaagtcgaaatatataataggttaaatatcacttttcgtccttttag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1286284 gtcacctaccttgcctttgtgcgtgcaagatgaatgtgtatgcgtttaacagttaagtcgaaatatataataggttaaatatcacttttcgtccttttag 1286383  T
Q  213 tttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaag 312  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1286384 tttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtttcaaaag 1286483  T
Q  313 tttcaaataggttcttttatttgataaattatcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttgga 412  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1286484 tttcaaataggttcttttagttgataaattatcaccgttacccctgctgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttgga 1286583  T
Q  413 tccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaacttctagcaatat 512  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1286584 tccaaacactactttttaaaagctccagggtgtcaaaacgctatgtttaatggtcacaaatgttcatttatagtgctagaaagacaacttctagcaatat 1286683  T
Q  513 taaactgcatttatagtgctagcgttttgatccaagtcaa 552  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  1286684 taaactgcatttatagtgctaacgttttgatccaagtcaa 1286723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 204 - 498
Target Start/End: Original strand, 35214811 - 35215107
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagt-cttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||||||||||  || ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  35214811 tccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcttttaa 35214910  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
    |||| |||| ||||||||||||  ||||| |||||||| ||  ||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||    
T  35214911 gtttcaaaaatttcaaataggtctttttagttgataaactatttcaccgttacccctgttgtcagtctccgtttaactgatgttgatgtagccgtttagt 35215010  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagaca 498  Q
    |||||||||||||| |||  || | |||||||||||| ||||||||||||  ||||||||| |||||||||||| |||||||||||||||||| ||||    
T  35215011 tgttgacttggatcaaaatgctgc-ttttaaaagctcgagggtgtcaaaatcctacgtttattggtcacaaatgatcatttatagtgctagaatgaca 35215107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 183 - 496
Target Start/End: Original strand, 5805022 - 5805337
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    |||| |||||| ||||||  |||||||||||||||||||||| |||| |||||| ||||| |||| ||||||||||||||||||||||||||||| ||||    
T  5805022 taggctaaataccactttcggtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaa 5805121  T
Q  283 ttctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactga 380  Q
    |||| ||| || || ||||||||| |||||||| || ||||| |||||| |||||||| ||  ||   |||  |||| || ||||||||| ||||| |||    
T  5805122 ttctcaagctattcctttaagtttcaaaagttttaactaggtccttttagttgataaactatttcgttgttttccctcctatcagtctccatttaattga 5805221  T
Q  381 tgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    || |||||| ||| |||||||||||||||||||| |||  || | ||||||||| || ||||||||||||||||| |||||||||||||||||| |||||    
T  5805222 tgctgatgtggcctttaagttgttgacttggatcaaaatgctgcattttaaaagttcgagggtgtcaaaacgctatgtttaatggtcacaaatgatcatt 5805321  T
Q  481 tatagtgctagaaaga 496  Q
    |||||||||| |||||    
T  5805322 tatagtgctaaaaaga 5805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 189 - 495
Target Start/End: Complemental strand, 5559751 - 5559454
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||||||| ||||||||||||||||| ||||  ||| |||||| ||||| ||| ||| |||||||||||||||||||||||||| |||||||  |    
T  5559751 aaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagttttaaa-gtttcaattaggtccttttagtttgacagaattccca 5559653  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaat-tatcaccgttacccctactgtcagtctccgtttaactgatgttgat 387  Q
    |||||||| |||||||||         |||||| ||  ||||| ||||||| | | |||||||||||||| || ||||| ||||||||||||||| ||||    
T  5559652 agttagtcctttaagttt---------caaataagtctttttagttgataactatttcaccgttacccctgctatcagtatccgtttaactgatgctgat 5559562  T
Q  388 gtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtg 487  Q
    |||| |||||||||||||| || |||| |||  || | ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  5559561 gtagtcgttaagttgttgagtttgatcaaaatgctgccttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaataatcatttatagtg 5559462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 184 - 494
Target Start/End: Original strand, 33235019 - 33235331
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaat 283  Q
    |||| |||||||||||||  || |||||||||||||||||| |||| ||| || ||||||||| ||||||||||||||||||||||| |||||| |||||    
T  33235019 aggtgaaatatcacttttgttcattttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtccttttggtttgacagaat 33235118  T
Q  284 tctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgat 381  Q
    ||  ||||||| | ||||| ||| |||||||||||| ||||  ||||| |||||||| ||  ||| ||||||||||  |||||||||| |||||||| ||    
T  33235119 tcccaagttagacctttaaatttcaaaagtttcaaagaggtcattttagttgataaactatttcatcgttacccctgttgtcagtctctgtttaactaat 33235218  T
Q  382 gttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcattt 481  Q
    | || ||||||  ||||||||||||| ||  || ||| | | | ||||||||| || |||||||||||| ||||||||||||||||||||||| ||||||    
T  33235219 gctgttgtagctcttaagttgttgacgtgcgtcaaaatattgccttttaaaagttctagggtgtcaaaatgctacgtttaatggtcacaaatgatcattt 33235318  T
Q  482 atagtgctagaaa 494  Q
    |||||| ||||||    
T  33235319 atagtgttagaaa 33235331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 184 - 498
Target Start/End: Original strand, 8039648 - 8039945
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaat 283  Q
    |||| ||||| ||||||| ||||||||||||||||| |||| |||| |||||  ||||| |||| ||||||||||||||||||||||||||||| |||||    
T  8039648 aggtcaaataccactttttgtccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtttgaaagaat 8039747  T
Q  284 tctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgat 381  Q
                     |||||| ||||||||||||||||| |||||| |||||||| |||  ||||||||||||| |||| ||| ||||||||||||||    
T  8039748 -----------------aagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctgctgttagtatccgtttaactgat 8039830  T
Q  382 gttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctc-cagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    | |||||||||||||||||||||||||| |||| |||  || | |||||||||||| ||||||||||||||||||||||   |||||||||||| |||||    
T  8039831 gctgatgtagccgttaagttgttgactttgatcaaaatgctgccttttaaaagctcgcagggtgtcaaaacgctacgtt---tggtcacaaatgatcatt 8039927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 189 - 473
Target Start/End: Original strand, 5559097 - 5559385
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtc-ttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    ||||| ||| ||| ||||||||| ||||||||||||  ||| |||||| |||||| ||||||||||||||| ||| |||||||||||||| | |||||      
T  5559097 aaataccacgtttggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtttgataaaattccc 5559196  T
Q  288 aagttagt-cttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgtt 384  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||| |||||||| ||  |||||||||||||| | ||||||      |||| |||||||    
T  5559197 aagttagtccttttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctgcagtcagttaataattaattgatgtt 5559296  T
Q  385 gatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    ||||||| | |||||||||||||||||||| |||| |  | |||||||| |||||||||||||||||| |||| |||||||||||||||    
T  5559297 gatgtagtcattaagttgttgacttggatcaaaacgccgccttttaaaatctccagggtgtcaaaacgttacggttaatggtcacaaat 5559385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 207 - 501
Target Start/End: Original strand, 20183778 - 20184070
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||||||||||||||||| ||| | |||  |||||||||  |||||||||||||| |||||| | ||| | ||| |||  ||||||||| |||||||||    
T  20183778 ttttagtttgacagaatttacaattcagttctttaaattttgaaagtttcaattagatcctttaa-tttaatagagttcccaagttagtcctttaagttt 20183876  T
Q  307 taaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgtt 404  Q
     |||| ||||||||| ||  ||||| ||||||||||||  ||| |||||||||  ||||||||| ||||||||| |||   ||||||  |||||||||||    
T  20183877 caaaaatttcaaataagtcattttagttgataaattatttcactgttacccctgttgtcagtcttcgtttaacttatg---atgtagttgttaagttgtt 20183973  T
Q  405 gacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    |||||||||| ||||  |   |||||||||||  ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20183974 gacttggatcaaaacgttgtcttttaaaagcttgagggtgtcaaaaccctacgtttaatggtcacaaatgatcatttatagtgctagaaagacaact 20184070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 189 - 473
Target Start/End: Complemental strand, 39959328 - 39959042
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||| | |||||||||||| ||||||   |    
T  39959328 aaataccacgtttggtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttcca 39959229  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    ||||| || ||||||||| |||||||||||||||||||||||| |||||||| ||  ||||||||| | ||  |||||||      |||| ||||| |||    
T  39959228 agttaatcatttaagtttcaaaagtttcaaataggttcttttacttgataaactatttcaccgttaacgctgatgtcagttaataattaattgatgctga 39959129  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    || ||||||||||||||||||||||||| |||| || | || || ||| | |||| |||||||||| ||||||||||||||||||||    
T  39959128 tgcagccgttaagttgttgacttggatcaaaacgctgccttgtagaagtttcaggatgtcaaaacgttacgtttaatggtcacaaat 39959042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 204 - 473
Target Start/End: Original strand, 28256498 - 28256770
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||||||||||||  ||| ||| |  |||||||||||||||||| ||  || |||||||||||||| |||||||| ||||||||| |||||     
T  28256498 tccttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtttgacagaattctcaagttagtcctttaaa 28256597  T
Q  304 ttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgtta-cccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||| |||| |||||  |||| ||      |||  ||||||||||||||| |||||||    
T  28256598 tttcaaaagtttcaaataggttcttttagttgataaactatttcactgttaccccctgttgtctgttaataattatttgatgttgatgtagcagttaagt 28256697  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    |||||||||||||| |||| || | |||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  28256698 tgttgacttggatcaaaacgctgccttttaaaaactctagggtgtcaaaacgttacgtttaatggtcacaaat 28256770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 189 - 473
Target Start/End: Original strand, 27995051 - 27995337
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||| ||| |||||||||||||||||||||| |||| ||||| |||||| |||||||| ||| || ||| || ||||| ||||| |||||||| |    
T  27995051 aaatatcacgtttggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcattttaatttgacagaattctca 27995150  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    ||||| || ||||||||| |||||| ||||||| ||  ||||| |||||||| ||  |||| ||||||||| ||||||||      |||| |||||||||    
T  27995151 agttaatcctttaagtttcaaaagtatcaaataagtaattttagttgataaactatttcactgttacccctgctgtcagttaataattaattgatgttga 27995250  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    ||| ||||||||||||||||||| |||| |||  || | | ||||||||| ||||||||||||| | ||||||||||||||||||||    
T  27995251 tgttgccgttaagttgttgactttgatcaaaatgcttcctattaaaagcttcagggtgtcaaaatgttacgtttaatggtcacaaat 27995337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 189 - 490
Target Start/End: Complemental strand, 28257071 - 28256778
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||||||| ||||||||||||||| | |||| | || ||||| |||||| |||  ||| ||||||||||||| ||||||||||| | |||| | |    
T  28257071 aaataccactttttgtccttttagtttgatataattctaaagttagttttttaagttttgaaaatttcaattaggtcattttagtttgacaaaattttca 28256972  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||| |||||||||||||         || ||| ||||| ||||||||||||  ||||| |||| || |||||||| | |||||||||||||||||    
T  28256971 agttagtcctttaagttttaaa---------tatgttattttagttgataaattatttcaccgctacctctgctgtcagtattcgtttaactgatgttga 28256881  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    ||||| |||||| ||||||| || || | ||| ||| ||||| |||||||| ||||||||||||  |||||||||||||||||||||| |||||||||||    
T  28256880 tgtagtcgttaaattgttgatttagaacaaaatactgctttt-aaaagctctagggtgtcaaaattctacgtttaatggtcacaaatgatcatttatagt 28256782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 189 - 501
Target Start/End: Original strand, 20366039 - 20366351
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||||| |||| ||||||||||||| |||||||| |||| |||||| ||||| |||| ||||||||||||| ||||||||||||||| |||||||| |    
T  20366039 aaatatcatttttggtccttttagttt-acagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtttgacagaattctca 20366137  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
     || | ||  |||  ||| || ||||||||||||||  ||||| |||||||| |||  |||||||||||| | ||||||| | ||||||||| ||| |||    
T  20366138 -gtcaatcccttatatttcaagagtttcaaataggtctttttagttgataaactatttcaccgttacccccattgtcagtattcgtttaactaatgctga 20366236  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    ||||| |||||||||||||| || |||| |||   | | ||||||||| | |||||| ||||||| |||||||||||||||||||||  ||||||   ||    
T  20366237 tgtagtcgttaagttgttgattttgatcaaaatgttgccttttaaaagtttcagggtatcaaaacactacgtttaatggtcacaaattatcatttgctgt 20366336  T
Q  487 gctagaaagacaact 501  Q
    ||||||||| |||||    
T  20366337 gctagaaaggcaact 20366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 183 - 495
Target Start/End: Original strand, 39958671 - 39958975
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||| || |||||| ||||| | || ||||||||||||| ||| ||||||||||| ||||    
T  39958671 taggctaaatatcatttttggtccttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtttgacagaa 39958770  T
Q  283 ttctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactga 380  Q
    |||  |   || || |||||||||         ||||||||| |||||| |||||||| |||  |||| |||||||| |||||||| | |||||||||||    
T  39958771 ttcccattctaatcctttaagttt---------caaataggtccttttagttgataaactatttcaccattacccctcctgtcagtattcgtttaactga 39958861  T
Q  381 tgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    ||||| |||| |||||||||||||||||| |||| ||| | | | |||||| |||||| | ||||||||  | ||||||||||||||||||||| |||||    
T  39958862 tgttgttgtatccgttaagttgttgactttgatcaaaatattgccttttaagagctcc-gtgtgtcaaagtgttacgtttaatggtcacaaatgatcatt 39958960  T
Q  481 tatagtgctagaaag 495  Q
    |||||||||||||||    
T  39958961 tatagtgctagaaag 39958975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 344 - 498
Target Start/End: Original strand, 1348788 - 1348942
Alignment:
Q  344 tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggt 443  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| |||||| || |||||||||||| |||   | | ||||||||||||||||||    
T  1348788 tcaccgttacccctgctgtcagtctccgtttaactgatgctgatgtagtcgttaaattattgacttggatcaaaatgttgccttttaaaagctccagggt 1348887  T
Q  444 gtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagaca 498  Q
    |||| |||| ||||||||||||||||||||| |||||| ||||||||||||||||    
T  1348888 gtcataacgttacgtttaatggtcacaaatgatcatttgtagtgctagaaagaca 1348942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 189 - 474
Target Start/End: Complemental strand, 35215458 - 35215171
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||| |||  |||||||||||||||| ||||||||| |||||| |||||||||| ||| ||||||||| ||| ||||| ||||| ||||||   |    
T  35215458 aaatatcacgtttgatccttttagtttgacaaaattttcaagttagtcctttaaatttcgaaaatttcaattaagtcattttaatttgacagaatttcca 35215359  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    | |||||||||||||||||||||||||||||||  |  ||||| |||||||| ||  |||  ||||||| |  ||| |||      |||||| |||||||    
T  35215358 aattagtcttttaagttttaaaagtttcaaataactcattttagttgataaactatttcattgttacccttgttgttagttaataattaactcatgttga 35215259  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatg 474  Q
    |||||||||||||||||| || |||||| || |  | | ||||||||||| || |||||||||| | |||||||||| ||||||||||    
T  35215258 tgtagccgttaagttgttaacatggatcaaagcgttgccttttaaaagcttcaaggtgtcaaaatgttacgtttaatcgtcacaaatg 35215171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 250 - 450
Target Start/End: Complemental strand, 23679603 - 23679402
Alignment:
Q  250 aagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcac 347  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||| |||||||| |||||| || ||||| |||||||| ||  ||||    
T  23679603 aagtttcaattaggttcttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagtttaaaatagattattttagttgataaactatttcac 23679505  T
Q  348 cgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtca 447  Q
    |||||||| | ||||||||      |||| ||||| ||||||||||||||||||||| ||||||||| ||||| ||   ||||||||||||||||| |||    
T  23679504 cgttacccttgctgtcagttaataattaattgatgctgatgtagccgttaagttgttaacttggatcaaaacattatcgtttaaaagctccagggtctca 23679405  T
Q  448 aaa 450  Q
    |||    
T  23679404 aaa 23679402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 189 - 331
Target Start/End: Original strand, 21433134 - 21433276
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||||||||||  |||||||||||||||| ||||  ||| |||||| ||||| |||| || |||||||||| ||||||||||||||| |||||||  |    
T  21433134 aaatatcacttttgatccttttagtttgacaaaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtttgaaagaattccca 21433233  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||| ||||||||| |||||||||||||| |||||||||    
T  21433234 agttagtcatttaagtttcaaaagtttcaaataagttctttta 21433276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 31893615 - 31893493
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaat 283  Q
    |||| |||||||| |||| |||||||||||||||||||||||  || |||||| ||||| ||| |||||||||||||||||||||||||||||| |||||    
T  31893615 aggtcaaatatcatttttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaat 31893516  T
Q  284 tctaaagttagtcttttaagttt 306  Q
    ||| ||||||||| |||||||||    
T  31893515 tctcaagttagtcctttaagttt 31893493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 331
Target Start/End: Complemental strand, 33879657 - 33879508
Alignment:
Q  182 ataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagaga 281  Q
    |||||| ||||| || |||| ||||||||||||||||||||||  ||| |||||| ||||| |||| ||||||||||||||||||||||| ||||| |||    
T  33879657 ataggtcaaataccatttttggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacaga 33879558  T
Q  282 attctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||   |||||| || ||||||||| ||||||||||||||||| ||||||    
T  33879557 atttccaagttaatcctttaagtttcaaaagtttcaaataggtcctttta 33879508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 206 - 480
Target Start/End: Original strand, 42990507 - 42990783
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtt 305  Q
    ||||||||| || |||||||| ||||||||| ||||| |||  ||||||| ||||||||| |||||||| || |||||| | |||||| | |||||||||    
T  42990507 cttttagttggaaagaatttttaaattagtcctttaagttttgaaagttttaattaggtcattttagttcgacagaattttcaagttaattttttaagtt 42990606  T
Q  306 ttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgt 403  Q
    |||||||||| || || ||  ||||| |||||| | ||  | |||||||||| |  |||||||      |||| ||||| | ||||||||||||||||||    
T  42990607 ttaaaagttttaattatgtcattttagttgatacactattttaccgttacccatgttgtcagttaataattaattgatgctaatgtagccgttaagttgt 42990706  T
Q  404 tgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    ||||||||||| |||| || | ||||||||| |  |||||||||||| | |||||||||| |||||| ||| |||||    
T  42990707 tgacttggatcaaaacgctgccttttaaaagttatagggtgtcaaaatgttacgtttaatcgtcacagatgatcatt 42990783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 203 - 331
Target Start/End: Original strand, 40904695 - 40904823
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    |||||||| |||||||| |||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||| | |||| | || |||||| |||||    
T  40904695 gtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcatttaa 40904794  T
Q  303 gttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||||||| | ||||||    
T  40904795 gttttaaaagtttcaaatagatcctttta 40904823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 209 - 501
Target Start/End: Complemental strand, 42991122 - 42990838
Alignment:
Q  209 ttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtttta 308  Q
    ||||||||| | || |||||| ||| || ||||||||||  |||||| ||| | ||| ||||||||||| |||||| | |||||| ||||| || |||      
T  42991122 ttagtttgaaaaaaatttcaagttaatcctttaaatttcggaagttttaatcaagtcattttagtttgacagaattttcaagttaatctttaaatttt-- 42991025  T
Q  309 aaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttga 406  Q
            ||||||||  ||||| |||||||| |||  ||||||| |||||  ||| ||||||| ||||||||||| | |||||||||||||||||||||    
T  42991024 --------aaataggtctttttagttgataaactatttcaccgtttcccctgttgttagtctccatttaactgatgctaatgtagccgttaagttgttga 42990933  T
Q  407 cttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    |||||||| |||  ||   |||||||| ||| ||||||| |||||||||| |||||| |||| ||||| || |||||||||||||||| ||||||    
T  42990932 cttggatcaaaatgctgaattttaaaaactcaagggtgttaaaacgctacatttaatagtcataaatgatcttttatagtgctagaaatacaact 42990838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 189 - 451
Target Start/End: Complemental strand, 20366672 - 20366407
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||| ||| ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||||||| |  || |||||||||||||| | |||||  |    
T  20366672 aaataccacatttggtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtttgacaaaattcgca 20366573  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat---caccgttacccctactgtcagtctccgtttaactgatgttg 385  Q
    |||||||| |||| |||| |||||||||||||| || |||||| ||||||||||||    |||||||||| | || | |||      |||||| ||| |     
T  20366572 agttagtcctttaggtttcaaaagtttcaaatatgtccttttagttgataaattatggaaaccgttacccttgctattagttaataattaactaatgcta 20366473  T
Q  386 atgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaac 451  Q
     ||||||| |||||||||||||||||||| ||||| |   | ||||||||||||||||||||||||    
T  20366472 ctgtagccattaagttgttgacttggatcaaaacaatgtctgttaaaagctccagggtgtcaaaac 20366407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 472
Target Start/End: Complemental strand, 31176031 - 31175804
Alignment:
Q  249 aaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--ca 346  Q
    ||||||||||||||||||||||||||||| ||||||   ||||||||| ||||||||| |||||||||||| |||| |||||| |||||||  |||  ||    
T  31176031 aaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagttgataatctattcca 31175932  T
Q  347 ccgttacccctactgtcagtctccgtttaactg---atgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggt 443  Q
     ||||||| ||  ||| |||||| |||||| ||   ||| ||||| ||||||||||||||||||||||||  |||  || | |||||||||||| ||| |    
T  31175931 acgttacctctgttgtaagtctcagtttaaatgataatgctgatgaagccgttaagttgttgacttggatgaaaatgcttcattttaaaagctcgaggat 31175832  T
Q  444 gtcaaaacgctacgtttaatggtcacaaa 472  Q
    ||||||||  || |||| |||||||||||    
T  31175831 gtcaaaaccttatgttt-atggtcacaaa 31175804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 186 - 340
Target Start/End: Complemental strand, 19925475 - 19925321
Alignment:
Q  186 gttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattc 285  Q
    |||||||| ||||||| || |||||||||||||| ||||  ||| |||||| ||||| || | ||||||| |||||| |||||||||||||| |||||||    
T  19925475 gttaaataccacttttggttcttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtttgacagaattc 19925376  T
Q  286 taaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
      ||||||||| ||||||||| ||||||||||||||||| |||| | ||||||||    
T  19925375 ccaagttagtcctttaagtttcaaaagtttcaaataggtcctttcagttgataaa 19925321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 288 - 494
Target Start/End: Complemental strand, 27995615 - 27995405
Alignment:
Q  288 aagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctc---cgtttaactgatg 382  Q
    ||||||||| ||||||||| |||||||| |||||| | |||||| |||||||| |||  ||||||||| |||  ||||| | |    |||||||||||||    
T  27995615 aagttagtcctttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgttactcctgttgtcaatataattcgtttaactgatg 27995516  T
Q  383 ttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcattta 482  Q
     | || ||| |||||||||||||||||||||| |||   | | ||||||||| | |||| |||||||||||||||||||||||||||| ||| |||||||    
T  27995515 ctaatttagtcgttaagttgttgacttggatcaaaatgttgccttttaaaaggttcagg-tgtcaaaacgctacgtttaatggtcacatatgatcattta 27995417  T
Q  483 tagtgctagaaa 494  Q
    ||||||||||||    
T  27995416 tagtgctagaaa 27995405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 21412931 - 21413047
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||||||||| || ||| || ||||||||| | |||||||| ||||||||||||||||    
T  21412931 tccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttttaaatagatcattttagtttcacagaattctcaagttagtcttttaag 21413030  T
Q  304 ttttaaaagtttcaaat 320  Q
    ||| |||||||| ||||    
T  21413031 tttcaaaagttttaaat 21413047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 206 - 469
Target Start/End: Complemental strand, 1349269 - 1349001
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagtta---gtcttttaa 302  Q
    |||||||||||||| |||||  || |||||||||||| |||||||||||| || ||  || ||||||||||| ||||||   || |||   ||| |||||    
T  1349269 cttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtttgacagaatttccaacttataagtcctttaa 1349170  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
    |||| |||||||||||||||||  ||||| ||||||||  ||  |||||||||||| | |||||||      |||  | |||||||||||| ||||||||    
T  1349169 gtttcaaaagtttcaaataggtcattttagttgataaaccatttcaccgttaccccaattgtcagttaataattatattatgttgatgtagtcgttaagt 1349070  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcac 469  Q
    ||||||||| |||| |||| || | ||||||||| | ||| ||||||||||| ||||||||||| ||||    
T  1349069 tgttgactttgatcaaaacgctgccttttaaaagtttcagagtgtcaaaacgttacgtttaatgatcac 1349001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 181 - 501
Target Start/End: Complemental strand, 10620365 - 10620071
Alignment:
Q  181 aataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagag 280  Q
    ||||||| ||||||||||||| ||||||||| |||||| ||||| | || |||||| |   ||| || ||||||||||||||| ||||||||||| | ||    
T  10620365 aataggtcaaatatcacttttggtccttttattttgactgaattcttaagttagtcct---aatatcgaaagtttcaattaggcccttttagtttaacag 10620269  T
Q  281 aattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaact 378  Q
    ||||   |||| |||| |||||||||         |||||| ||| ||||| ||||||||||||  ||||||||||| |  |||| | |||||||||| |    
T  10620268 aatttccaagtaagtcctttaagttt---------caaataagttattttagttgataaattattccaccgttaccc-tgttgtcggcctccgtttaatt 10620179  T
Q  379 gatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttca 478  Q
    ||||||| |||| ||||||||||||||||| ||||               |||||| | ||||||||||||||||||||||||||||||||||||| |||    
T  10620178 gatgttgttgtaaccgttaagttgttgactcggat---------------taaaagtttcagggtgtcaaaacgctacgtttaatggtcacaaatgatca 10620094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 189 - 393
Target Start/End: Complemental strand, 1441567 - 1441368
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||||||| ||||||||||||||||| ||||  ||| |||||| ||||  |||| ||||||||||||||||| ||||||||||| |||||||  |    
T  1441567 aaatatcacttttggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtttgatagaattccca 1441468  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctc--cgtttaactgatgtt 384  Q
    ||||||||||||||         ||||||||||||| |||||| |||||||| ||  |||| ||||||||| |||||||| ||  | ||||||||||| |    
T  1441467 agttagtcttttaa---------gtttcaaataggtccttttagttgataaactatttcactgttacccctgctgtcagtatccacatttaactgatgct 1441377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 189 - 322
Target Start/End: Original strand, 21412856 - 21412989
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||||| |||| |||||||||||||||||||||| | || ||| || ||||| |||  |||||||||||||| |||||||||||||| |||||| | |    
T  21412856 aaatatcatttttagtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttca 21412955  T
Q  289 agttagtcttttaagttttaaaagtttcaaatag 322  Q
    |||||||| ||||||||| |||||||| ||||||    
T  21412956 agttagtcctttaagtttcaaaagttttaaatag 21412989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 31893240 - 31893357
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| || |||| || ||||||||||||||||||| |||| ||||| |||||| |||| ||||||||||||||||| ||||||||||| |||||||  |    
T  31893240 aaataccatttttggttcttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattccta 31893339  T
Q  289 agttagtcttttaagttt 306  Q
    ||||||||||||||||||    
T  31893340 agttagtcttttaagttt 31893357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 250 - 414
Target Start/End: Original strand, 10619851 - 10620017
Alignment:
Q  250 aagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcac 347  Q
    ||||||||||||||| |||||||||||| | |||| | ||||||||| ||||||||| ||||||||||||||||| |||||| |||||||| ||  ||||    
T  10619851 aagtttcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcac 10619950  T
Q  348 cgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatc 414  Q
    ||||| |||| ||| ||||      ||||| |||| ||||||| | |||||||||||||||||||||    
T  10619951 cgttatccctgctgccagttaataattaacagatgctgatgtatctgttaagttgttgacttggatc 10620017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 5075459 - 5075549
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaat 463  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| || | |||||||||||| |||||||||||||| ||||||||||    
T  5075459 ttaactgatgctgatgtagccgttaagttgttgacttggatcaaaacgctgcattttaaaagctcgagggtgtcaaaacgttacgtttaat 5075549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 23150643 - 23150761
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||||| |||| |||| |||||| |||||||||  ||||||||||||| ||| ||||| ||||| |||||||| |  ||||||||||||    
T  23150643 gtccttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcattttaatttgacagaattctcagattagtcttttaa 23150742  T
Q  303 gttttaaaagtttcaaata 321  Q
    |||| ||||||||||||||    
T  23150743 gtttcaaaagtttcaaata 23150761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 249 - 480
Target Start/End: Complemental strand, 33235626 - 33235393
Alignment:
Q  249 aaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tca 346  Q
    ||||||| |||| |||||||||||||||| | |||| | ||||||||| ||||||||| ||||  |||||||||||  ||||| |||||||| ||  |||    
T  33235626 aaagttttaatttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagttgataaactatttca 33235527  T
Q  347 ccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtc 446  Q
    | ||||||| |  |||||||      |||| ||||  |||||||||||| |||||||||||||||||| |||     | ||||||||||| ||||||| |    
T  33235526 ctgttacccttgttgtcagttaataattaattgatactgatgtagccgtcaagttgttgacttggatcaaaatgtcgcattttaaaagcttcagggtgcc 33235427  T
Q  447 aaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    |||| | ||||||||||||||||||||| |||||    
T  33235426 aaaatgttacgtttaatggtcacaaatgatcatt 33235393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 203 - 324
Target Start/End: Complemental strand, 5805713 - 5805593
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||||| |||||| || |||||| ||||| |||  ||||||||||||| |||||||||||||||  ||||| | |||||| ||||||||    
T  5805713 gtccttttagtttgacaaaatttt-aagttagtcatttaagttttgaaagtttcaattatgtccttttagtttgactgaattttcaagttaatcttttaa 5805615  T
Q  303 gttttaaaagtttcaaataggt 324  Q
    |||| |||||||||||||||||    
T  5805614 gtttcaaaagtttcaaataggt 5805593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 189 - 321
Target Start/End: Original strand, 36566268 - 36566400
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattct-a 287  Q
    ||||| ||| ||| |||||||||||||||||||||| | || |||||| ||||| |||  ||||||||||||||||| ||||||||||| |||||||| |    
T  36566268 aaataccacgtttggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctca 36566367  T
Q  288 aagttagtcttttaagttttaaaagtttcaaata 321  Q
    ||||||||| ||||||||| |||| |||||||||    
T  36566368 aagttagtc-tttaagtttcaaaattttcaaata 36566400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 4187491 - 4187626
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaat 283  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||| || ||||| |||  |||||||||||||||| ||||| |||||| | |||    
T  4187491 aggttaaatatcacttttcgtcagtttagtttgacagaattcataaattaatcctttaagtttagaaagtttcaattaggtactttttgtttgacataat 4187590  T
Q  284 tctaaagttagtcttttaagttttaaaagtttcaaa 319  Q
    ||  ||||||||  ||||||||| ||||||||||||    
T  4187591 tcccaagttagttctttaagtttcaaaagtttcaaa 4187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 186 - 340
Target Start/End: Original strand, 34951215 - 34951368
Alignment:
Q  186 gttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattc 285  Q
    |||||||| |||||||  || |||||||||||||  |||  |||  |||||||| || |||| |||||||||||||||||||||| |||||| | |||||    
T  34951215 gttaaataccacttttgatctttttagtttgacaatattcccaacatagtcttt-aagtttcgaaagtttcaattaggtccttttcgtttgacataattc 34951313  T
Q  286 taaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    | ||||||||| ||||||||| |||||||||||||| ||  ||||| ||||||||    
T  34951314 ttaagttagtcctttaagtttcaaaagtttcaaataagtcattttagttgataaa 34951368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 203 - 473
Target Start/End: Complemental strand, 8040266 - 8040009
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||| || |||||| |||||||||||||||| |||||||| |||||| ||| ||||||||| |||| |||| ||  ||||||||| |||      
T  8040266 gtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttagcttgacagaa-tcccaagttagtccttt-- 8040170  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
           ||||||||||||||| |||||| ||||| || ||  |||||||||||||| ||||||||      |||| |||||      ||||||||||||    
T  8040169 -------aagtttcaaataggtccttttagttgatgaactatttcaccgttacccctgctgtcagttaataattaattgatg-----ctagccgttaagt 8040082  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    ||||||||| |||  |||| || | |||||||||||||||| |||||||| | || |||||||||||| ||||    
T  8040081 tgttgactttgattaaaacgctgccttttaaaagctccaggatgtcaaaatgttatgtttaatggtcataaat 8040009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 340
Target Start/End: Original strand, 1346470 - 1346617
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||| ||||||||  ||||||||||||||||||||| | || |||||  ||||| |||| |||||||||||||  |||||||||||||| | ||||   |    
T  1346470 aaatttcacttttgatccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttcca 1346569  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    |||||||| ||||||||| |||||||||||    ||||||||| ||||||||    
T  1346570 agttagtcctttaagtttcaaaagtttcaa----gttcttttagttgataaa 1346617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 340
Target Start/End: Complemental strand, 6220492 - 6220359
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtt 305  Q
    |||||||||||| | ||||||||| ||| |  |||||| ||  ||||||||||| |||| |||||||||| | |||||||| ||||||||| ||||||||    
T  6220492 cttttagtttgatataattttcaagttaattctttaaaattataaagtttcaataaggtacttttagtttcatagaattctcaagttagtc-tttaagtt 6220394  T
Q  306 ttaaaagtttcaaataggttcttttatttgataaa 340  Q
    | ||||||||  |||||||||||||| ||||||||    
T  6220393 tcaaaagttttcaataggttcttttagttgataaa 6220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 198 - 340
Target Start/End: Complemental strand, 21413234 - 21413093
Alignment:
Q  198 ttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtct 297  Q
    |||| |||||||||||| |||||||||  |||||||||  ||| | |||| ||| ||||||||||| ||||||| ||||| ||||||   |||||||| |    
T  21413234 ttttggtccttttagttcgacagaattcccaaattagttattttagtttcgaaaatttcaattaggcccttttaatttgacagaatttctaagttagt-t 21413136  T
Q  298 tttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    ||||||||| ||||||||||||||||| |||||| || |||||    
T  21413135 tttaagtttcaaaagtttcaaataggtccttttagttcataaa 21413093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 207 - 340
Target Start/End: Original strand, 20101831 - 20101962
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    |||||||||||| |||||  ||| ||||| |||||| |||| |||||||||||||| ||||||||||| || ||| || | ||||||||| |||||||||    
T  20101831 ttttagtttgactgaattcccaagttagt-ttttaagtttcgaaagtttcaattagatccttttagttcgacagattt-tcaagttagtcctttaagttt 20101928  T
Q  307 taaaagtttcaaataggttcttttatttgataaa 340  Q
    ||||||||| |||||| |||| ||| ||||||||    
T  20101929 taaaagttttaaatagattctcttagttgataaa 20101962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 286
Target Start/End: Original strand, 40904755 - 40904838
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattct 286  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||| ||||||||||| ||| |||||||| ||||| ||||||||    
T  40904755 gtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattct 40904838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 188 - 306
Target Start/End: Complemental strand, 22876988 - 22876871
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    |||||| |||||||  |||||||||||||||| ||||| ||| ||| | |||||| |||| ||||||||||||| ||| ||||||||||| ||||||||     
T  22876988 taaataccacttttgatccttttagtttgacataatttccaagttaat-ttttaagtttcgaaagtttcaattaagtcattttagtttgacagaattctc 22876890  T
Q  288 aagttagtcttttaagttt 306  Q
    |||||| || |||||||||    
T  22876889 aagttaatcctttaagttt 22876871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 36566346 - 36566458
Alignment:
Q  207 ttttagtttgacagaattttcaaa-ttagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtt 305  Q
    |||||||||||||||||| ||||| ||||||||| || |||||||| |||||| || ||| ||||||||||| | |||||| ||||||||| ||||| ||    
T  36566346 ttttagtttgacagaattctcaaagttagtcttt-aagtttcaaaattttcaaataagtcattttagtttgacaaaattctcaagttagtcctttaaatt 36566444  T
Q  306 ttaaaagtttcaaa 319  Q
    | ||||||||||||    
T  36566445 tcaaaagtttcaaa 36566458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 34951587 - 34951472
Alignment:
Q  198 ttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa-ttctaaagttagtc 296  Q
    |||| ||| |||||||||||||||||| |||| |||||| ||||| |||| |||||||||||||| |||||||||||||| | || ||||||| | ||||    
T  34951587 ttttggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttgacacaatttctaaa-tcagtc 34951489  T
Q  297 ttttaagttttaaaagt 313  Q
     ||||||||| ||||||    
T  34951488 ctttaagtttcaaaagt 34951472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 373 - 480
Target Start/End: Complemental strand, 5805502 - 5805395
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    ||||| |||| |||||||||| |||||||||||||||||||| |||| ||   ||||||||| || |||||||||||||  ||||| |||| ||||||||    
T  5805502 ttaaccgatgctgatgtagcctttaagttgttgacttggatcaaaacgctgtcttttaaaagttctagggtgtcaaaactttacgtgtaatcgtcacaaa 5805403  T
Q  473 tgttcatt 480  Q
    || |||||    
T  5805402 tgatcatt 5805395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 5805654 - 5805583
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||||||||||| |||||||||| ||| |||||||| ||||||||||||||| |||||| ||||||||    
T  5805654 gtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtcattttagtt 5805583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 31176017 - 31175946
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||  ||||||||||||||    
T  31176017 gtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagtt 31175946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 203 - 274
Target Start/End: Original strand, 35214871 - 35214942
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||||||||||||||||| |||| |||||||||||| |||||||| |||||| |||||| ||||||||    
T  35214871 gtccttttagtttgacagaattctcaagttagtcttttaagtttcaaaaatttcaaataggtctttttagtt 35214942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 203 - 357
Target Start/End: Complemental strand, 1286922 - 1286769
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||| | |||||||| || | |||| ||||| |||||||||||| || ||| |||| | | ||||| |||||| | || |||||| |||||    
T  1286922 gtccttttagtttcatagaatttttaagtcagtcatttaa-tttcaaaagttttaaatagatcctataa-tttgatagaattttcaaattagtcctttaa 1286825  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccct 357  Q
    ||||||||||||| ||||| | ||||||| |||||||||||  ||||||||||||||    
T  1286824 gttttaaaagttttaaatatg-tcttttagttgataaattatttcaccgttacccct 1286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 203 - 296
Target Start/End: Complemental strand, 33879576 - 33879483
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtc 296  Q
    ||||||||| ||||||||||||| ||| ||| || ||||| ||||||||||||||| ||||||||||||||| || | |||||  |||||||||    
T  33879576 gtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagtttcaaataggtccttttagttcgacataattcccaagttagtc 33879483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 40904694 - 40904763
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    ||||||||| |||||| | |||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  40904694 ggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtcctttta 40904763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 473
Target Start/End: Original strand, 1441133 - 1441233
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||| |||||||||||||| |||||| ||||| ||||||||| |||| || | ||||||||| ||   |||||||||||| || ||||||||||||||||    
T  1441133 ttaattgatgttgatgtagtcgttaaattgttaacttggatcaaaacgctgcattttaaaagttctgcggtgtcaaaacgttatgtttaatggtcacaaa 1441232  T
Q  473 t 473  Q
    |    
T  1441233 t 1441233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 10619867 - 10619935
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||||||||| |||| |||| |||||| ||||| ||||||||||||||| |||||||||||||||    
T  10619867 cttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 10619935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 1441368 - 1441300
Alignment:
Q  424 ctttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaa 494  Q
    ||||||||||||| || | ||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  1441368 ctttttaaaagcttcaagatgtcaaaacgctacgt--aatggtcacaaatgatcatttatagtgctagaaa 1441300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 442 - 501
Target Start/End: Original strand, 23679264 - 23679323
Alignment:
Q  442 gtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    ||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||||    
T  23679264 gtgtcaaaacgctacgtttaatcctcaaaaatgatcatttatagtgctagaaagacaact 23679323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 340
Target Start/End: Complemental strand, 4187763 - 4187673
Alignment:
Q  250 aagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    |||||| |||||| |||||||| ||||| |||||| | ||||||||| ||||| |||||||||||| ||||||||  ||||| ||||||||    
T  4187763 aagttttaattagatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagttgataaa 4187673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 4187749 - 4187679
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||| ||||||||||||||||| |||||| ||||||||| |||||||| || |||||| ||||||||    
T  4187749 tccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagtt 4187679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 21433396 - 21433278
Alignment:
Q  202 cgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagt-ctttt 300  Q
    |||| ||||||||||||||||||  ||| ||| || ||||| ||||||||||||||| || ||  |||| |||||| |||||||  |||||||| |||||    
T  21433396 cgtcattttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgtttgacagaattcccaagttagtactttt 21433297  T
Q  301 aagttttaaaagtttcaaa 319  Q
    |||||| |||| |||||||    
T  21433296 aagtttcaaaaatttcaaa 21433278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 501
Target Start/End: Complemental strand, 29591050 - 29590914
Alignment:
Q  372 tttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtg-------tcaaaacgctacgtttaatg 464  Q
    |||||||||||||||||||   ||||||||||||||||| ||| |||   | |||||||||||||||||| ||       ||||||| ||| |||||||     
T  29591050 tttaactgatgttgatgtatttgttaagttgttgacttgaatcaaaatgatgctttttaaaagctccaggatgtcaaaactcaaaacactaggtttaata 29590951  T
Q  465 gtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    |||||||||| | |||| ||||||||||||| |||||    
T  29590950 gtcacaaatgataatttgtagtgctagaaaggcaact 29590914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 34951521 - 34951419
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||||||| |||||  |||| |||| ||||| |||||||||| | || || | ||||||||||||| | |||||| ||||||||| ||||||    
T  34951521 tccttttagtttgacacaatttctaaatcagtcctttaagtttcaaaagtataaaatatgaccttttagtttgacacaattctcaagttagtcatttaag 34951422  T
Q  304 ttt 306  Q
    |||    
T  34951421 ttt 34951419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 36566281 - 36566343
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggt 324  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||| |||||    
T  36566281 ggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggt 36566343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 323
Target Start/End: Original strand, 19925104 - 19925228
Alignment:
Q  198 ttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtct 297  Q
    |||| ||| ||||||||||||||||||| ||| ||| || || || |||| |||||||||||||| |||||||||||||| | |||| |  | ||||||     
T  19925104 ttttggtctttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtttgacacaatt-tccaattagtcc 19925202  T
Q  298 tttaagttttaaaagtttcaaatagg 323  Q
    ||||||||| |||| | |||||||||    
T  19925203 tttaagtttcaaaaatatcaaatagg 19925228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 31893597 - 31893528
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||| ||||||   ||||||||| ||||||||||||||||||||| ||||| ||||||    
T  31893597 ggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtcctttta 31893528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 21433408 - 21433328
Alignment:
Q  250 aagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttt 330  Q
    |||||||||||| ||| ||||||||||| |||||||  |||||| || ||||||||| |||||||||||||| ||| ||||    
T  21433408 aagtttcaattacgtcattttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttt 21433328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 5075355 - 5075444
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtc 296  Q
    ||||||||||||||||  | |||| |||||| ||||| ||| |||||||||||||  ||||||||| ||||| |||||||| |||||||||    
T  5075355 cttttagtttgacagatctctcaagttagtcctttaagttttaaaagtttcaattgagtcctttta-tttgacagaattctcaagttagtc 5075444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 19925170 - 19925271
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||||||| ||||| ||| |||||| ||||| |||||||| | |||| |||| ||||||||||| | ||||||   ||||||||| ||||||    
T  19925170 tccttttagtttgacacaatttccaa-ttagtcctttaagtttcaaaaatatcaaataggaccttttagtttaacagaatttccaagttagtcctttaag 19925268  T
Q  304 ttt 306  Q
    |||    
T  19925269 ttt 19925271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 21433208 - 21433282
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttga 277  Q
    ||||||||||||||| ||||||  ||| |||||| ||||| ||||||||||||||| || || ||||||||||||    
T  21433208 gtccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtttga 21433282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 36566588 - 36566526
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    |||||| ||||||| |||| |||||||||||||||||| ||| |||||||||||| |||||||    
T  36566588 taaataccacttttggtccctttagtttgacagaatttccaagttagtcttttaagtttcaaa 36566526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 27995658 - 27995569
Alignment:
Q  185 ggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||||||| |||| ||| ||||||| ||||| | |||| || |||||| ||||| |||||||||||| || ||| |||||||||||    
T  27995658 ggttaaatatcatttttggtctttttagtatgacatattttttaagttagtcctttaagtttcaaaagttttaaatagatccttttagtt 27995569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 29591195 - 29591103
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttga 277  Q
    |||| ||||| ||||||| ||| | ||||||||| | |||| |||| |||||| ||||| |||||||||||| ||||||||| |||||||||||    
T  29591195 aggtcaaataccactttt-gtcttattagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagtttga 29591103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 21412870 - 21412938
Alignment:
Q  263 gtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    ||||||||||||||| |||||||| |||||| || |||||||||| |||||||||| ||| | ||||||    
T  21412870 gtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatcctttta 21412938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 311
Target Start/End: Complemental strand, 31893536 - 31893437
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    |||||||||||||||||||||| |||| |||||| ||||| |||||||         || ||||||||||||||| | |||||| ||||||||| |||||    
T  31893536 gtccttttagtttgacagaattctcaagttagtcctttaagtttcaaa---------taagtccttttagtttgacaaaattctcaagttagtcctttaa 31893446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 41020242 - 41020163
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaatt 284  Q
    |||||||||||||||| ||||| ||| ||||| |||||| |||  ||||||| |||||| |||||||||||||| ||||||    
T  41020242 tccttttagtttgacataatttccaagttagt-ttttaagttttgaaagttttaattagatccttttagtttgacagaatt 41020163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 1441011 - 1441066
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaa 319  Q
    |||||||||||||| |||||||  |||||||| |||||||||| ||||||||||||    
T  1441011 tccttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaaa 1441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 33235612 - 33235541
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||||||| |||| |||| |||||| ||||| ||||||||  ||||| |||||| ||||||||    
T  33235612 gtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagtt 33235541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 1441011 - 1441065
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa 258  Q
    |||||||||||||||||||||  ||| ||||| |||||| |||||||||||||||    
T  1441011 tccttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaa 1441065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 336
Target Start/End: Original strand, 5075355 - 5075425
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttga 336  Q
    |||||||||||| |||  ||| ||||||||| ||||||||||||||||||||| |  || |||||||||||    
T  5075355 cttttagtttgacagatctctcaagttagtcctttaagttttaaaagtttcaattgagtccttttatttga 5075425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 31893257 - 31893315
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggt 324  Q
    |||||||||||| |||||||| |||||||| ||||||||||  |||||||||| |||||    
T  31893257 cttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggt 31893315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 23150642 - 23150698
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaa 318  Q
    |||||||||||||||| | |||||| ||||||||| ||||| |||| ||||||||||    
T  23150642 ggtccttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaa 23150698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 414
Target Start/End: Complemental strand, 6220329 - 6220283
Alignment:
Q  368 tccgtttaactgatgttgatgtagccgttaagttgttgacttggatc 414  Q
    |||||||||| | |||||||||| ||||||||||||||| |||||||    
T  6220329 tccgtttaacggttgttgatgtaaccgttaagttgttgatttggatc 6220283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 480
Target Start/End: Complemental strand, 20184178 - 20184124
Alignment:
Q  426 ttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    ||||||||||| || |||||||||||| ||| |||||||||| |||||| |||||    
T  20184178 ttttaaaagcttcaaggtgtcaaaacgttacatttaatggtcgcaaatgatcatt 20184124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 28104300 - 28104382
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat 344  Q
    |||||||||||||||  | |||||  ||| ||||| ||||||||| |||||||| ||||| ||  ||||| ||||||||||||    
T  28104300 ggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagttgataaattat 28104382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 5805714 - 5805646
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||| | |||| | ||||||||| |||||||||| |||||||||| || || ||||||    
T  5805714 ggtccttttagtttgacaaaatt-ttaagttagtcatttaagttttgaaagtttcaattatgtcctttta 5805646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 23679587 - 23679539
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagttt 255  Q
    ||||||||||||||||||| |||| |||||| ||||| ||||||||||||    
T  23679587 cttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagttt 23679539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 34951583 - 34951514
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||| ||||||||||| |||||| | ||||||||| |||||||||  |||||||||| ||| | ||||||    
T  34951583 ggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatcctttta 34951514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 277
Target Start/End: Complemental strand, 36566487 - 36566454
Alignment:
Q  244 tttcaaaagtttcaattaggtccttttagtttga 277  Q
    ||||||||||||||| ||||||||||||||||||    
T  36566487 tttcaaaagtttcaaataggtccttttagtttga 36566454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 4e-95; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 182 - 498
Target Start/End: Complemental strand, 36196643 - 36196327
Alignment:
Q  182 ataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagaga 281  Q
    ||||| ||||||| |||||| |||||||||||||||||  ||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| |||    
T  36196643 ataggctaaatattacttttggtccttttagtttgaca--attttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacaga 36196546  T
Q  282 attctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactg 379  Q
    |||   ||||||||| ||| ||||| |||||||||||||||||  ||||| |||||||| |||  ||||||||||||| |||||||||||||||||||||    
T  36196545 atttccaagttagtcatttgagtttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtcagtctccgtttaactg 36196446  T
Q  380 atgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcat 479  Q
    ||| |||| |||||||||||||||||||||||||| |||  || | |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||    
T  36196445 atgctgatatagccgttaagttgttgacttggatcaaaatgctgccttttaaaaactcgagggtgtcaaaacgctacgtttaatggtcacaaatgatcat 36196346  T
Q  480 ttatagtgctagaaagaca 498  Q
    |||||||||||||| ||||    
T  36196345 ttatagtgctagaaggaca 36196327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 189 - 501
Target Start/End: Complemental strand, 27893695 - 27893381
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||||||| ||||||||||||||||| |||| |||| |||||| ||||| ||||  ||||||||||||||| |||||||||||| |||||||  |    
T  27893695 aaatatcacttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtttgacagaattccca 27893596  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||| ||||||||| ||||||||||||||| |  ||||| |||||||| ||  ||| ||||| ||||  |||||||||||||||||||||||||||    
T  27893595 agttagtcctttaagtttcaaaagtttcaaatagatcattttagttgataaactatttcatcgttaaccctgttgtcagtctccgtttaactgatgttga 27893496  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    |||||||||||| ||||||||||||||| |||   | |  |||||||| || ||| |||||||| ||||||| ||||||||||||||| |||||||| ||    
T  27893495 tgtagccgttaaattgttgacttggatcaaaatgttgccatttaaaaggtcgaggatgtcaaaatgctacgtgtaatggtcacaaatgatcatttattgt 27893396  T
Q  487 gctagaaagacaact 501  Q
    |||||||||||||||    
T  27893395 gctagaaagacaact 27893381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 189 - 501
Target Start/End: Original strand, 19080618 - 19080932
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| || |||| ||| |||||||| |||||||||    ||||| || ||||| |||  ||||||||||||||||| ||||||||||| |||||| | |    
T  19080618 aaataccatttttggtcattttagttcgacagaattccttaattaatcctttaagttttgaaagtttcaattaggtcattttagtttgacagaattttca 19080717  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||| | ||||||||| |||||||||| |||||| |||||| |||||||| |||  ||||||||| ||||||||| |||||||||||| |||||||||    
T  19080718 agttagacatttaagtttcaaaagtttcatataggtccttttagttgataaactatttcaccgttactcctactgtcggtctccgtttaattgatgttga 19080817  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    |||| |||||||||||||||| |||||| ||| |||   |||||||||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||    
T  19080818 tgtaaccgttaagttgttgacatggatcaaaatactgtcttttaaaagctcgagggtgtcaaaatgctatgtttaatgatcacaaatgatcatttatagt 19080917  T
Q  487 gctagaaagacaact 501  Q
    |||||||||||||||    
T  19080918 gctagaaagacaact 19080932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 189 - 330
Target Start/End: Original strand, 31263913 - 31264055
Alignment:
Q  189 aaatatcacttttcg-tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    ||||||||||||| | || ||||||||||||||||||| ||| ||| || ||||| |||| ||||||||||||||||||||||||||||| ||||||||     
T  31263913 aaatatcactttttggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctc 31264012  T
Q  288 aagttagtcttttaagttttaaaagtttcaaataggttctttt 330  Q
    ||||||||| ||||||||| |||||||||||||||||||||||    
T  31264013 aagttagtcctttaagtttcaaaagtttcaaataggttctttt 31264055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 231 - 501
Target Start/End: Complemental strand, 20536046 - 20535780
Alignment:
Q  231 ttagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttt 330  Q
    |||||| ||||| || | ||||||| |||||  || ||||||||||| | |||||| |||||||||||||||         |||||||||| ||  | ||    
T  20536046 ttagtcctttaagttacgaaagttttaattatatcattttagtttgacataattctcaagttagtcttttaa---------gtttcaaataagtcttgtt 20535956  T
Q  331 atttgataaatta--tcaccgttaccc---ctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactact 425  Q
    | |||||||| ||  |||||||| |||   || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||     |     
T  20535955 agttgataaactatttcaccgttgccccttcttctgtcagtctccatttaactgatgttgatgtagccgttaagttattgacttggatcaaaatgtagcc 20535856  T
Q  426 ttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  20535855 ttttaaaagctcgagggtgttaaaacactacgtttaatggtcacaaataatcatttatagtgcgagaaagacaact 20535780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 189 - 331
Target Start/End: Original strand, 30907064 - 30907205
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||||| |||| ||| |||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||||| | |||||| |    
T  30907064 aaatatcatttttggtc-ttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattctca 30907162  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||| ||||||||| ||||||||||||||| | ||||||    
T  30907163 agttagtcctttaagtttcaaaagtttcaaatagatcctttta 30907205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 254 - 496
Target Start/End: Original strand, 39301371 - 39301614
Alignment:
Q  254 ttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgtt 351  Q
    ||||||||| |||||||||||| | | |||| | ||||||||| ||||| ||| | || ||| |||||||||||| || ||| |||| |||  |||| ||    
T  39301371 ttcaattagatccttttagtttcacataattatcaagttagtcctttaa-tttcataaattttaaataggttcttgtaattgttaaactatttcaccatt 39301469  T
Q  352 acccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaac 451  Q
    ||| ||| ||| |||||||||||||||||||||||| || | |||||||||||||||| |||| |||   | | ||| ||||| |  |||||||||||||    
T  39301470 acctctattgttagtctccgtttaactgatgttgatatatctgttaagttgttgacttagatcaaaatgtttcatttaaaaagtttgagggtgtcaaaac 39301569  T
Q  452 gctacgtttaatggtcacaaatgttcatttatagtgctagaaaga 496  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||    
T  39301570 gctacgtttaatggtcacagatgattatttatagtgctagaaaga 39301614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 203 - 480
Target Start/End: Complemental strand, 11871871 - 11871592
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||||||||||| |||   ||||  |||| |||  ||| ||||||||| ||||| ||||||||| ||||||||  |||||||| |||||    
T  11871871 gtccttttagtttgacagaatttccaagccagtccgttaagttttgaaactttcaattatgtcctcttagtttgacagaattctcgagttagtcctttaa 11871772  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
    |||| |||||||| ||||| ||  ||||| |||||||||||  | |||||||||||| ||  ||||      |||||||||| |||||||| |||||| |    
T  11871771 gtttcaaaagttttaaatatgtcattttagttgataaattatttaaccgttacccctgctaccagttaataattaactgatgctgatgtagtcgttaaat 11871672  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    ||||||||| |||| |||   |   ||||||||||| ||||||||||||||| |||||||||| |||||||||| |||||    
T  11871671 tgttgactttgatcaaaatggtggcttttaaaagcttcagggtgtcaaaacgttacgtttaatcgtcacaaatgatcatt 11871592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 254 - 498
Target Start/End: Original strand, 15506040 - 15506288
Alignment:
Q  254 ttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgtt 351  Q
    |||||||||||||||||||||||| | |||||| || ||| || ||||||||| |||||||| ||| ||||  ||||| |||||||| ||  ||||||||    
T  15506040 ttcaattaggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcattttaattgataaactatttcaccgtt 15506139  T
Q  352 acccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttg---acttggatccaaacactactttttaaaagctccagggtgtcaa 448  Q
    | ||||||||| |||||| ||||||||||| |||||||| | |||||||| |||   |||||||||  ||     |  | ||||||||| ||||||||||    
T  15506140 aaccctactgttagtctctgtttaactgatattgatgtatctgttaagttattgactacttggatcataatggggc-ctataaaagctcgagggtgtcaa 15506238  T
Q  449 aacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagaca 498  Q
    ||| |||||||||||| ||| ||||| ||||| |||||||||||||||||    
T  15506239 aacactacgtttaatgctcataaatgatcattcatagtgctagaaagaca 15506288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 175 - 340
Target Start/End: Complemental strand, 31264309 - 31264142
Alignment:
Q  175 atatataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaatta--gtcttttaaatttcaaaagtttcaattaggtccttttag 272  Q
    ||||| ||||||| |||||||||||||  |||||||||||||||||||||| ||| |||  ||  ||||| |||| ||||||||||||| ||||||||||    
T  31264309 atataaaataggtcaaatatcacttttgatccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttag 31264210  T
Q  273 tttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    ||||| ||||||   ||||||||  ||||||||| ||||||||||||||||| |||||| ||||||||    
T  31264209 tttgacagaatttccaagttagttatttaagtttcaaaagtttcaaataggtccttttagttgataaa 31264142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 34336414 - 34336276
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    ||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||| ||| ||||||||| ||||| | ||    
T  34336414 taggtcaaatatcacttttggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttgacaaaa 34336315  T
Q  283 ttctaaagttagtcttttaagttttaaaagtttcaaata 321  Q
    |||| || |||||  ||||| ||| ||||||||||||||    
T  34336314 ttctcaaattagttctttaaatttcaaaagtttcaaata 34336276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 259 - 474
Target Start/End: Original strand, 20535501 - 20535719
Alignment:
Q  259 ttaggtccttttagtttgagagaattctaaagttagtcttttaa-gttttaaaagtttcaaataggttcttttatttgataaattat--caccgttaccc 355  Q
    |||| |||||||||||| | | |||| | ||||||||| ||||| |||| ||| |||||||||||||  ||||| |||||||| |||  |||||||| ||    
T  20535501 ttagatccttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtcattttagttgataaactatttcaccgttatcc 20535600  T
Q  356 ctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgcta 455  Q
    || ||||||||      |||||||||||||||||||||||||||||||||||||||||| ||||  | | |||||||||||| |  ||||||||| | ||    
T  20535601 ctgctgtcagttaataattaactgatgttgatgtagccgttaagttgttgacttggatcaaaacgttgccttttaaaagctcaaaagtgtcaaaatgtta 20535700  T
Q  456 cgtttaatggtcacaaatg 474  Q
    |||||||| ||||||||||    
T  20535701 cgtttaatcgtcacaaatg 20535719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 179 - 323
Target Start/End: Complemental strand, 16781194 - 16781049
Alignment:
Q  179 ataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtc-ttttaaatttcaaaagtttcaattaggtccttttagtttga 277  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||| |||| |||||| |||||| |||  ||||||| |||||||||||||||||||||    
T  16781194 ataataggctaaatatcacttttggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtttga 16781095  T
Q  278 gagaattctaaagttagtcttttaagttttaaaagtttcaaatagg 323  Q
     | |||||  ||||||||| ||||| ||| ||||||||||| ||||    
T  16781094 caaaattcacaagttagtcctttaaatttcaaaagtttcaattagg 16781049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 30907449 - 30907316
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtcctttt-agtttgagagaattcta 287  Q
    ||||| |||||||  |||||||||||||||| |||||  || |||||| ||||| |||| |||||||||||||||||||||| ||||||| ||||||||     
T  30907449 aaataccacttttaatccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtccttttaagtttgaaagaattctc 30907350  T
Q  288 aagttagtcttttaagttttaaaagtttcaaata 321  Q
    ||||||||| ||||||||| ||||||||||||||    
T  30907349 aagttagtcctttaagtttcaaaagtttcaaata 30907316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 263 - 480
Target Start/End: Complemental strand, 15506565 - 15506346
Alignment:
Q  263 gtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctact 360  Q
    |||||||| |||| | |||||||| || |||||  ||||| |||||||||||| ||||| || |||||| |||||||| |||  |||| ||| | || ||    
T  15506565 gtccttttggtttaacagaattctcaatttagttatttaaattttaaaagttttaaatatgtccttttagttgataaactatttcaccattatctctgct 15506466  T
Q  361 gtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgttt 460  Q
    |||| |      |||||||||||||||||||||||||| |||||||||| |||| ||||||||  |||||||| ||||||||||||||||   |||||||    
T  15506465 gtcaattaataattaactgatgttgatgtagccgttaaattgttgactttgatcaaaacactatgttttaaaatctccagggtgtcaaaatattacgttt 15506366  T
Q  461 aatggtcacaaatgttcatt 480  Q
    ||| |||||||||| |||||    
T  15506365 aattgtcacaaatgatcatt 15506346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 34336019 - 34336159
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaat 283  Q
    |||| ||||| |||||||  |||||||||||||| | |||||||||||||||| ||||| |||  ||||||||||||| ||| ||||||||||| |||||    
T  34336019 aggtcaaataccacttttgatccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtttgacagaat 34336118  T
Q  284 tctaaagttagtcttttaagttttaaaagtttcaaataggt 324  Q
    ||  ||||||||| ||||||||| |||||||| ||||||||    
T  34336119 tcccaagttagtcctttaagtttcaaaagttttaaataggt 34336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 189 - 334
Target Start/End: Original strand, 32341382 - 32341528
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||||||| || ||||||||||||||| ||| | || ||| || |||||||||| ||| ||| ||||| || |||||||||||| |||||| | |    
T  32341382 aaatatcacttttggttcttttagtttgacaggattcttaagttaatcctttaaatttcgaaaatttgaattaagttcttttagtttgaaagaattttca 32341481  T
Q  289 agttagt-cttttaagttttaaaagtttcaaataggttcttttattt 334  Q
    | ||||| |||||||||||||||| ||||||||||||||||||||||    
T  32341482 aattagtccttttaagttttaaaaatttcaaataggttcttttattt 32341528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 203 - 319
Target Start/End: Original strand, 30907137 - 30907253
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||||| |||| |||| |||||| ||||| ||||||||||||||| ||| ||||||||| |||| | |||||  ||||||||| |||||    
T  30907137 gtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagattgacataattcccaagttagtcatttaa 30907236  T
Q  303 gttttaaaagtttcaaa 319  Q
    |||| ||||||||||||    
T  30907237 gtttcaaaagtttcaaa 30907253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 8260392 - 8260507
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||||||| |||||||| ||||||||||| ||||| |||| |||||||||||||| || ||||||||||| ||| |||| || ||| |||||||| |||    
T  8260392 ttttagttttacagaattctcaaattagtcctttaagtttcgaaagtttcaattagatcattttagtttgacagagttctcaaattactcttttaatttt 8260491  T
Q  307 taaaagtttcaaatag 322  Q
     |||||||||||||||    
T  8260492 caaaagtttcaaatag 8260507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 189 - 419
Target Start/End: Original strand, 27893024 - 27893247
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||| ||| |||||||||||||||||||||| |||| ||| || |||||||||| |||||||||||||  || ||||||||||| || ||||  |    
T  27893024 aaataccacgtttggtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtttgacagtattccca 27893123  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||| |||         |||||||||||||||  ||||| |||||||| ||  ||| ||||||| || ||||||||      |||| ||||| |||    
T  27893124 agttagtccttt---------aagtttcaaataggtctttttagttgataaactatttcaacgttacctctgctgtcagttaataattaattgatgatga 27893214  T
Q  387 tgtagccgttaagttgttgacttggatccaaac 419  Q
    ||||||||||||||||||||||| |||| ||||    
T  27893215 tgtagccgttaagttgttgacttagatcaaaac 27893247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 34429684 - 34429793
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    |||||||||||||||||||||| |||| |||||| |||||||||| ||| ||||||||||||||||||| ||||| ||||||   |||||| || |||||    
T  34429684 gtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatttgaaagaatttccaagttaatcctttaa 34429783  T
Q  303 gttttaaaag 312  Q
    |||| |||||    
T  34429784 gtttcaaaag 34429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 203 - 311
Target Start/End: Complemental strand, 34336334 - 34336226
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||| ||||||| |||| ||||||||||  ||||||||||||||||||||| || |||||| |||||||| |||||| | |||||| ||||||||    
T  34336334 gtccttttaatttgacaaaattctcaaattagttctttaaatttcaaaagtttcaaataagtccttgtagtttgacagaattttcaagttaatcttttaa 34336235  T
Q  303 gttttaaaa 311  Q
    |||| ||||    
T  34336234 gtttcaaaa 34336226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 41265364 - 41265262
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||||| |||||| |||| |||||| ||||| |||| ||||||||||||| ||||| ||| ||||| |||||||| ||||||||| ||||||    
T  41265364 tccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagtttcaattatgtcctcttaatttgacagaattctcaagttagtcctttaag 41265265  T
Q  304 ttt 306  Q
    |||    
T  41265264 ttt 41265262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 498
Target Start/End: Original strand, 42116904 - 42117018
Alignment:
Q  384 tgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttat 483  Q
    |||||| |||||||||||| ||||||||||| ||||| ||| || ||||  ||||||| |||||||| ||| | |||||| |||||||||| ||||||||    
T  42116904 tgatgtggccgttaagttgctgacttggatcaaaacattacgttataaagactccaggatgtcaaaatgctgcatttaatagtcacaaatgatcatttat 42117003  T
Q  484 agtgctagaaagaca 498  Q
    || ||||||||||||    
T  42117004 agggctagaaagaca 42117018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 37543214 - 37543126
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttga 277  Q
    ||||| || |||| || |||||||||||||||||||||||| |||||||||||| |||  ||||||||||||| |||||||||||||||    
T  37543214 aaataccatttttggttcttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttga 37543126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 31263988 - 31264091
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    |||||||||||||||||||||| |||| |||||| ||||| ||||||||||||||| ||||| |||||  ||||| |||||||  ||||||||  |||||    
T  31263988 gtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttttctttgacagaattcccaagttagtactttaa 31264087  T
Q  303 gttt 306  Q
    ||||    
T  31264088 gttt 31264091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 19081124 - 19081055
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttg 276  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||  ||||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttttagtttg 19081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 39301944 - 39301841
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||| |||||||| || |||||| ||||||||| |||||||| |||||  || ||||||||||| |||||| | |||||| |  |||||    
T  39301944 gtccttttagtttgatagaatttttaagttagtcctttaaattttaaaagttttaattaaatctttttagtttgacagaatttttaagttatttctttaa 39301845  T
Q  303 gttt 306  Q
    ||||    
T  39301844 gttt 39301841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 16781109 - 16781044
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtcctt 268  Q
    ||||||||||||||||| ||||  ||| |||||| |||||||||||||||||||||||||| ||||    
T  16781109 gtccttttagtttgacaaaattcacaagttagtcctttaaatttcaaaagtttcaattaggccctt 16781044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 37542956 - 37543053
Alignment:
Q  208 tttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||||||||||||| || ||| |||||||||||| |||| ||||||| ||||| ||| ||||||||||| | ||||   ||||||||| |||||||||    
T  37542956 tttagtttgacagaactt-caagttagtcttttaagtttcgaaagttttaattaagtcattttagtttgacataatttccaagttagtcctttaagttt 37543053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 331
Target Start/End: Complemental strand, 37543197 - 37543132
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||| |||||| | |||||||||||||||||||| |||||||||| || || ||||||    
T  37543197 cttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtcctttta 37543132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 39376456 - 39376351
Alignment:
Q  214 ttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagt 313  Q
    |||||||||||| ||| |||||| ||||| ||||||| ||||||| |||||| ||||| ||||| | | |||  ||||||||| |||| |||| ||||||    
T  39376456 ttgacagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtctttttaatttgacaaatttcctaagttagtcctttatgtttcaaaagt 39376357  T
Q  314 ttcaaa 319  Q
     |||||    
T  39376356 ctcaaa 39376351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 42117281 - 42117196
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||| || |||| |||||||||||||| ||||| ||  || |||||| ||||| |||||||||||| || |||||||||||||||    
T  42117281 aaataccatttttggtccttttagtttgtcagaaattctaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 42117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 15506570 - 15506494
Alignment:
Q  198 ttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||| |||| |||||||| |||| |||||  ||||||||| |||||||| || || ||||||||||||    
T  15506570 ttttcgtccttttggtttaacagaattctcaatttagttatttaaattttaaaagttttaaatatgtccttttagtt 15506494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 34336102 - 34336169
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||||||||  ||| |||||| ||||| |||||||||||| || |||||| ||||||||    
T  34336102 ttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaataggtctttttagtt 34336169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 16781171 - 16781101
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtc-ttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||| ||||||||||| |||||||| ||||||||| ||||||||||| ||||||| || ||||| ||||||    
T  16781171 ggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtcctttta 16781101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 21813195 - 21813257
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaa 251  Q
    ||||| ||||||| ||||||||||||||| |||||| |||| |||||| ||||| ||||||||    
T  21813195 aaataccacttttagtccttttagtttgatagaattctcaagttagtcctttaagtttcaaaa 21813257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 41265364 - 41265310
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaa 318  Q
    ||||||||||||||||||||| | ||||||||| |||||||||  ||||||||||    
T  41265364 tccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagtttcaa 41265310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 19081124 - 19081067
Alignment:
Q  267 ttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggt 324  Q
    ||||||||||| |||||||| || ||||||||||||||||  |||||||||| |||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggt 19081067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 34429683 - 34429752
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||| |||||||| ||||||||| ||||| |||  ||| |||||| ||||| ||||||    
T  34429683 ggtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtcctttta 34429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 39301945 - 39301892
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagttt 315  Q
    |||||||||||||||| |||||| | ||||||||| ||||| ||||||||||||    
T  39301945 ggtccttttagtttgatagaatttttaagttagtcctttaaattttaaaagttt 39301892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 5116895 - 5116951
Alignment:
Q  250 aagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    |||||||||||||||||||||||||||| | |||| | || |||||| |||||||||    
T  5116895 aagtttcaattaggtccttttagtttgacaaaatttttaaattagtcctttaagttt 5116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 21813209 - 21813257
Alignment:
Q  263 gtccttttagtttgagagaattctaaagttagtcttttaagttttaaaa 311  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  21813209 gtccttttagtttgatagaattctcaagttagtcctttaagtttcaaaa 21813257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 5116908 - 5116955
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    ||||||||||||||||| |||||| ||||||||| ||||| |||||||    
T  5116908 gtccttttagtttgacaaaatttttaaattagtcctttaagtttcaaa 5116955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 20535506 - 20535577
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaa-tttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||||||| ||| |||| |||| |||||| |||||| ||||||| ||||||| |||||| ||||||||    
T  20535506 tccttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtcattttagtt 20535577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 480
Target Start/End: Complemental strand, 39301781 - 39301674
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||||| | ||||| |||||  |||| ||| ||||||||||| ||||  |   |||||||||||||| |||||||||||  |||||||||| |||| |||    
T  39301781 ttaactaacgttgacgtagctattaaattggtgacttggatcaaaacgttgtcttttaaaagctccatggtgtcaaaactttacgtttaattgtcagaaa 39301682  T
Q  473 tgttcatt 480  Q
    || |||||    
T  39301681 tgatcatt 39301674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 324
Target Start/End: Complemental strand, 39376540 - 39376406
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||||||||||  |||||| ||||| |||||||||  || ||| |   |||| |||| |||||||  |||||||| |||||  |||| ||||||   |    
T  39376540 aaatatcacttttgatccttt-agtttcacagaatttcgaagttaattcattaagtttcgaaagttttgattaggtctttttaaattgacagaatttcca 39376442  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggt 324  Q
    |||||||| ||||||||| ||| |||||||||||||    
T  39376441 agttagtcctttaagtttcaaacgtttcaaataggt 39376406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 16780927 - 16780989
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    |||||| |||||||  |||||||| || |||||||||||||| |||||| ||||| |||||||    
T  16780927 taaataccacttttgatccttttaattcgacagaattttcaagttagtcctttaagtttcaaa 16780989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 20537525 - 20537475
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattag 234  Q
    ||||||||||||||||||| || ||||||||||||| |||| |||| ||||    
T  20537525 aggttaaatatcacttttcatctttttagtttgacataattctcaagttag 20537475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 16103258 - 16103299
Alignment:
Q  290 gttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  16103258 gttagtcttttaagttttttaagtttcaaatatgttctttta 16103299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 480
Target Start/End: Original strand, 27893273 - 27893326
Alignment:
Q  427 tttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    ||||||||||||||||||| |  ||| |||||||||| |||||||||| |||||    
T  27893273 tttaaaagctccagggtgttaggacgttacgtttaatcgtcacaaatgatcatt 27893326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 277
Target Start/End: Complemental strand, 31264124 - 31264091
Alignment:
Q  244 tttcaaaagtttcaattaggtccttttagtttga 277  Q
    ||||||||||||||| ||||||||||||||||||    
T  31264124 tttcaaaagtttcaaataggtccttttagtttga 31264091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 15505960 - 15506024
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtcctttt 270  Q
    ||||||||||||||||||||| |||||| || ||||| ||   ||||||||||||| ||| ||||    
T  15505960 cttttagtttgacagaatttttaaattactcctttaagttatgaaagtttcaattaagtcatttt 15506024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 15506049 - 15506101
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagttt 255  Q
    ||||||||||||||||| |||| |||||||| || ||||| ||| ||||||||    
T  15506049 gtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttt 15506101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 41265105 - 41265149
Alignment:
Q  196 acttttcgtccttttagtttgacagaattttcaaattagtctttt 240  Q
    |||||| ||| ||||||||||||| ||||||||| ||||||||||    
T  41265105 acttttggtcattttagtttgacataattttcaagttagtctttt 41265149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 6e-91; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 179 - 501
Target Start/End: Original strand, 20728508 - 20728831
Alignment:
Q  179 ataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgag 278  Q
    ||||||||| ||||| ||||||| ||| ||||||||||||||||||| ||| |||||| ||||| |||| |||| |||||||||||||||||||||| |     
T  20728508 ataataggtcaaataccacttttggtctttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtttaac 20728607  T
Q  279 agaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaa 376  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||  ||||| |||| ||| ||  |||||||||||| || |||||||||||||||||    
T  20728608 agaattctcaagttagtcctttaagttttaaaagtttcaaatatgtctttttagttgaaaaactatttcaccgttacccttattgtcagtctccgtttaa 20728707  T
Q  377 ctgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgtt 476  Q
    |||||| |||||||| | |||||||| ||||||||||| |||| ||   ||||||||||||||| |||||||||| ||| |||||||||||||||||| |    
T  20728708 ctgatgctgatgtagtcattaagttg-tgacttggatcaaaacgctgtcttttaaaagctccagagtgtcaaaacactatgtttaatggtcacaaatgat 20728806  T
Q  477 catttatagtgctagaaagacaact 501  Q
    |||||||||||||||||||||||||    
T  20728807 catttatagtgctagaaagacaact 20728831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 189 - 501
Target Start/End: Complemental strand, 5735114 - 5734802
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||||| | |||||||||||||||  ||||| |||| |||||| |||||||||| ||| ||| ||||| ||||||||||||| | |||||||| |    
T  5735114 aaatatcacttatggtccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtttaacagaattctca 5735015  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||| |||||| || |||||||||||||||||  ||||| |||||||| ||  ||||| |||||||| | ||||||||| ||||||| ||||| ||    
T  5735014 agttagtcctttaag-ttcaaaagtttcaaataggtcattttagttgataaactatttcaccattacccctgccgtcagtctctgtttaac-gatgtaga 5734917  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    |||| ||||||||||||||||||  ||| |||  || | |||||||||| | | |||||||||| |||||||||| || ||||||||| |||||||||||    
T  5734916 tgtaaccgttaagttgttgacttaaatcaaaatgctgccttttaaaagcccgatggtgtcaaaatgctacgtttattgatcacaaatgatcatttatagt 5734817  T
Q  487 gctagaaagacaact 501  Q
    |||||||||||||||    
T  5734816 gctagaaagacaact 5734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 189 - 494
Target Start/End: Original strand, 19278695 - 19279001
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||||||||||  ||||||||||||||||||||| | || |||||| |||||||||||||| ||| |||||| | |||||||||||| |||||||| |    
T  19278695 aaatatcacttttgatccttttagtttgacagaattcttaagttagtcctttaaatttcaaaatttt-aattagcttcttttagtttgacagaattctca 19278793  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||    ||||||||| || | |||||||||  |  ||||| |||||||| |||  ||| ||||||| |  ||| ||||||| ||||||||||| |||    
T  19278794 agttacctctttaagtttcaataatttcaaataaatcattttagttgataaactatttcactgttacccatgttgttagtctccttttaactgatgctga 19278893  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    ||| | |||||||||||||||||||||| ||||  |   ||||||||| |||||| |||||||||||||||||||||  ||||||||| |||||||||||    
T  19278894 tgtcgtcgttaagttgttgacttggatcaaaacgttgtcttttaaaagttccaggatgtcaaaacgctacgtttaattatcacaaatgatcatttatagt 19278993  T
Q  487 gctagaaa 494  Q
    ||||||||    
T  19278994 gctagaaa 19279001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 195 - 490
Target Start/End: Original strand, 36417882 - 36418173
Alignment:
Q  195 cacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttag 294  Q
    |||||||  |||||||||||| |||||||| |||| |||||| |||||||||| |||||||||||||||| ||||| |||||| | |||||| |||||||    
T  36417882 cacttttgatccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttcttttggtttgacataattctcaagttag 36417981  T
Q  295 tcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagc 392  Q
    || |||||||||         ||||||||| |||||| ||||||||||||  ||| |||||| || ||||||||||| |||||||| ||||| |||||||    
T  36417982 tcctttaagttt---------caaataggtccttttagttgataaattatttcactgttaccgctgctgtcagtctctgtttaactaatgttaatgtagc 36418072  T
Q  393 cgttaagttgttgacttggatccaaacactactttttaaaagctccagggtg----tcaaaacgctacgtttaatggtcacaaatgttcatttatagtgc 488  Q
     || |||||||||||||| ||| |||  || | |||||| ||||| ||||||    || ||||||||||||||||||||||||||| |||||||||||||    
T  36418073 tgt-aagttgttgacttgaatcgaaatgctgccttttaatagctcgagggtgcatgtctaaacgctacgtttaatggtcacaaatgatcatttatagtgc 36418171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 189 - 480
Target Start/End: Complemental strand, 36418534 - 36418239
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||| || ||| ||| ||||||||||||| |||| |||| |||||| ||||  |||||||||||||||||||||||||||||||||| | |||| | |    
T  36418534 aaatatgacgtttggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataattttca 36418435  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgtta--cccctactgtcagtctccgtttaactgatgtt 384  Q
    |||||||| ||||||||| ||||||||||||||||| |||||| |||||||| ||  |||||||||  |||||  |||||||      ||| |||||| |    
T  36418434 agttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccccctcatgtcagttaataattagctgatgct 36418335  T
Q  385 gatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    |||||||||||||||||||||||||| ||| ||||  |   ||||||||||||| | | ||||||||  |||||||||| |||||||||| |||||    
T  36418334 gatgtagccgttaagttgttgacttgaatcaaaacgttgtcttttaaaagctccggtgagtcaaaacattacgtttaatcgtcacaaatgatcatt 36418239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 195 - 495
Target Start/End: Original strand, 13543080 - 13543384
Alignment:
Q  195 cacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaag---t 291  Q
    ||||||| ||||||||||||||||| ||||   || ||| |  ||||| |||| ||||||||||||||||| |||||||||||  |||||   |||   |    
T  13543080 cacttttggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttgatggaatttccaagttat 13543179  T
Q  292 tagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgt 389  Q
    ||||| ||||||||| |||||||||||||| ||  ||||| |||||||||||  ||||||||  |||| || ||||| ||||||||||| ||| ||||||    
T  13543180 tagtcctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcaccgttgtccctgctatcagtgtccgtttaacttatgctgatgt 13543279  T
Q  390 agccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgct 489  Q
    || || ||||||||||||||||||| ||||  | | ||||||||| | ||||||||||||||||||||||||||||||||  ||   |||||||||||||    
T  13543280 agtcg-taagttgttgacttggatcaaaacgttgccttttaaaagtttcagggtgtcaaaacgctacgtttaatggtcactgattaacatttatagtgct 13543378  T
Q  490 agaaag 495  Q
    ||||||    
T  13543379 agaaag 13543384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 184 - 485
Target Start/End: Original strand, 18248943 - 18249246
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaat 283  Q
    |||| ||||| ||||||| ||||||||||||||| |||||||| || ||| |||||||  |||  ||||||| || || ||||||||||||| | |||||    
T  18248943 aggtcaaataccacttttggtccttttagtttgatagaatttttaagttaatcttttacgttttgaaagttttaactatgtccttttagtttaacagaat 18249042  T
Q  284 tctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgat 381  Q
    ||| ||||||||| ||||||||| |||||||| ||||||||  ||||| |||||||| ||  ||| |||||||||| |||||| |      |||||| ||    
T  18249043 tctcaagttagtcatttaagtttcaaaagttttaaataggtctttttagttgataaactatttcatcgttacccctgctgtcaattaataattaactaat 18249142  T
Q  382 gttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcattt 481  Q
      ||||||||||||| ||||||||| ||||||| |||  || | |||||||||||| |||||||||||||| ||| |||||| |||||||||| ||||||    
T  18249143 actgatgtagccgttgagttgttgatttggatcaaaatgctgcattttaaaagctctagggtgtcaaaacgttacatttaatagtcacaaatgatcattt 18249242  T
Q  482 atag 485  Q
    ||||    
T  18249243 atag 18249246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 199 - 480
Target Start/End: Original strand, 30737740 - 30738023
Alignment:
Q  199 tttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtctt 298  Q
    ||||||| ||||| |||||||||||| |||| ||| || |||||||||| ||||||||||||| ||| ||||||||||| | |||||| || ||||||||    
T  30737740 tttcgtctttttaatttgacagaattctcaagttaatcatttaaatttcgaaagtttcaattacgtctttttagtttgacataattctcaaattagtctt 30737839  T
Q  299 ttaagttttaaaagtttcaaataggttcttttatttgataaa--ttatcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgtt 396  Q
    |||||||| |||||||| ||||| ||  ||| | ||||||||   | | ||||||||||||||| |||||      |||||| ||| |||||||| ||||    
T  30737840 ttaagtttcaaaagttttaaataagtcatttaagttgataaactgttttaccgttacccctactatcagttagtaattaacttatgctgatgtagtcgtt 30737939  T
Q  397 aagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    |||||||||||||||||| ||| |||  ||||||||||| ||| |||||||||| | |||||||||| |||||||||| |||||    
T  30737940 aagttgttgacttggatcaaaatactgttttttaaaagccccaaggtgtcaaaatgttacgtttaatcgtcacaaatgatcatt 30738023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 189 - 473
Target Start/End: Complemental strand, 13543736 - 13543450
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| |||||||  || |||||||||||||||||| |||||||||| |||||||||||||||||||  |  || |||||||||||||  |||||||| |    
T  13543736 aaataccacttttactctttttagtttgacagaattctcaaattagttttttaaatttcaaaagtttttaacagatccttttagtttggaagaattctta 13543637  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    ||||| || ||||| ||| |||||||||||||||||||||||| |||||||| ||  |||| ||||||  | ||||||||      |||| |||||||||    
T  13543636 agttaatcctttaaatttcaaaagtttcaaataggttcttttacttgataaactatttcactgttacctatgctgtcagttaataattaattgatgttga 13543537  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    |||| ||||||||||||||||||||||| |||   |   ||||||||||| || ||| |||||||  ||||||||||||||| ||||    
T  13543536 tgtaaccgttaagttgttgacttggatcaaaatgttgtcttttaaaagcttcaaggtatcaaaacattacgtttaatggtcaaaaat 13543450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 183 - 480
Target Start/End: Complemental strand, 20729175 - 20728886
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    ||||||||||||||| ||| ||||||||||||||| | |||| |||| |||||| ||||||||| |||         ||| |||||||||||||| ||||    
T  20729175 taggttaaatatcacgtttggtccttttagtttgataaaattatcaagttagtcctttaaattttaaa---------tagatccttttagtttgacagaa 20729085  T
Q  283 ttctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactga 380  Q
    || | ||||||||| ||||| ||||||||||||||||||||| |||||| |||||||| |||  |||| |||||| |  ||||||       |||||| |    
T  20729084 ttttcaagttagtcctttaaattttaaaagtttcaaataggtccttttagttgataaactatttcaccattacccattttgtcagataataattaact-a 20728986  T
Q  381 tgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    || ||||||||| |||||||||||||||| |||| |||| || | ||||||||||||||||||||||||||| || ||||||| |||||||||| |||||    
T  20728985 tgctgatgtagctgttaagttgttgactttgatcaaaacgctgcattttaaaagctccagggtgtcaaaacgttaagtttaattgtcacaaatgatcatt 20728886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 204 - 501
Target Start/End: Complemental strand, 30738377 - 30738077
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    ||||||||||||||||||||||  || ||||| |||||| |||| ||| ||| ||||||||| ||||| ||||| |||||||| ||||| ||| |||| |    
T  30738377 tccttttagtttgacagaatttcgaagttagtattttaagtttcgaaatttt-aattaggtcattttaatttgacagaattctcaagtttgtcctttatg 30738279  T
Q  304 ttttaaaagtttcaaataggttcttttatttg--ataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaag 399  Q
    ||| |||||||||||||| ||  ||||| |||  ||||| |||  ||||||||||| | |||||||       ||||||||||||||| |||||||||||    
T  30738278 tttcaaaagtttcaaatatgtcattttagttgtgataaactatttcaccgttacccttgctgtcagataataattaactgatgttgatttagccgttaag 30738179  T
Q  400 ttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaa 499  Q
    |||||||||| |||| ||| | |   ||||||||| |  ||||||||||| | ||| ||||||| |||||||||  ||||||||||||||||||||||||    
T  30738178 ttgttgacttagatcaaaataatgtcttttaaaagtttaagggtgtcaaaccactatgtttaatagtcacaaattatcatttatagtgctagaaagacaa 30738079  T
Q  500 ct 501  Q
    ||    
T  30738078 ct 30738077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 182 - 501
Target Start/End: Original strand, 35189897 - 35190208
Alignment:
Q  182 ataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagaga 281  Q
    |||||| ||||||||||||| ||| ||||| ||||| |||||| |||| ||||||||| || |||| ||||||| || |||||| ||||||||||| |||    
T  35189897 ataggtcaaatatcacttttagtcattttaatttgatagaattctcaagttagtcttt-aagtttcgaaagttttaaataggtcattttagtttgacaga 35189995  T
Q  282 attctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactg 379  Q
    | ||  ||||||||| ||||||||| ||||   |||         ||||| |||||||| |||  ||| |||||||||  |||||||      |||||||    
T  35189996 actcccaagttagtcctttaagtttcaaaaagatca---------ttttagttgataaactatttcactgttacccctgttgtcagttaataattaactg 35190086  T
Q  380 atgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcat 479  Q
    |||||||||||| |||||||||||||||||||||| |||   | | ||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  35190087 atgttgatgtagtcgttaagttgttgacttggatcaaaatgttgcctttcaaaagctctagggtgtccaaacgctacgtttaatggtcacaaatgatcat 35190186  T
Q  480 ttatagtgctagaaagacaact 501  Q
    ||| ||| ||| ||||||||||    
T  35190187 ttaaagttctataaagacaact 35190208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 263 - 501
Target Start/End: Complemental strand, 32459915 - 32459675
Alignment:
Q  263 gtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctact 360  Q
    |||||||| ||||||  ||||||| || ||||||||||||||||||||| |||||||||||| |||||| | |||||| ||  |||| ||||||  |  |    
T  32459915 gtccttttcgtttgaccgaattctcaaattagtcttttaagttttaaaaatttcaaataggtccttttagtcgataaactatttcactgttaccattgtt 32459816  T
Q  361 gtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgttt 460  Q
    ||||||||||||||||||||| ||||||| |||||||| ||  | ||||||||| ||||  |   |||  || |||||| |  |||||||||||||||||    
T  32459815 gtcagtctccgtttaactgatattgatgtggccgttaaattactaacttggatcgaaacgatgtgtttctaatgctccaagtagtcaaaacgctacgttt 32459716  T
Q  461 aatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    |||||||||||| | |||||||||| |||| |||| |||||    
T  32459715 aatggtcacaaaagatcatttatagggctaaaaaggcaact 32459675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 189 - 324
Target Start/End: Original strand, 18951293 - 18951428
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||| ||| ||||||||||||||||||||||  ||| |||||| ||||| |||||||||||| || ||| |||||||||||||| |||||||| |    
T  18951293 aaataacacatttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaattctca 18951392  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggt 324  Q
    |||||||| |||||||||||||||||| ||||||||    
T  18951393 agttagtcctttaagttttaaaagttttaaataggt 18951428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 189 - 480
Target Start/End: Original strand, 5734453 - 5734747
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||  ||| ||||||||| |||||| ||||||| || ||| |  ||||| |||  ||||||||||||| ||| ||||| ||||| |||||||  |    
T  5734453 aaatatcatgtttggtccttttaatttgactgaatttttaagttacttctttaagttttgaaagtttcaattatgtcattttaatttgacagaattccta 5734552  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaac---tgatgt 383  Q
    ||||| || |||||||||||||||||||||||| ||  ||||| || ||||| ||  |||||||||||||| ||||||||      |||||   | |||     
T  5734553 agtta-tcctttaagttttaaaagtttcaaataagtcattttagttaataaactatttcaccgttacccctgctgtcagttaataattaactaataatgc 5734651  T
Q  384 tgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    |||||||||||||||||| ||||||| |||| ||||  |  | ||||||||||||| |||||||||||| |||||||||| |||||||||| |||||    
T  5734652 tgatgtagccgttaagtttttgactttgatcaaaac-gttgtctttaaaagctccaaggtgtcaaaacgttacgtttaatcgtcacaaatgatcatt 5734747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 188 - 480
Target Start/End: Complemental strand, 35190547 - 35190263
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    |||||||||| ||| ||||||||| ||||||||||||||||| ||| |  ||||| |||  ||||||||||||||||||||||||||||| | ||||||     
T  35190547 taaatatcacgtttggtccttttaatttgacagaattttcaagttacttctttaagttttgaaagtttcaattaggtccttttagtttgacaaaattctc 35190448  T
Q  288 aagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttg 385  Q
    || || |||||||||||||           ||| |||  ||||| |||||||| ||  |||||||||||| |  |||||||      |||||||||| ||    
T  35190447 aaatttgtcttttaagttt----------caattggtctttttagttgataaactatttcaccgttacccttgttgtcagttaataattaactgatgctg 35190358  T
Q  386 atgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    || |||| ||||| |||||||||| |||| |||  || | ||||||||||| ||||||||||||| | |||||||||| ||| |||||| |||||    
T  35190357 atttagcggttaatttgttgactttgatcaaaatgctgccttttaaaagcttcagggtgtcaaaatgttacgtttaatcgtcgcaaatgatcatt 35190263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 203 - 473
Target Start/End: Original strand, 1722504 - 1722769
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||| ||| ||||  ||| |||||| ||||| |||||||||||| || ||| | |||||||||||| | |||||| |||||| || |||||    
T  1722504 gtccttttagtttaacaaaattcacaagttagtcctttaattttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 1722603  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaattatcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttg 402  Q
    |||| |||||||||||||| ||  ||||| || |||||||||     ||  | ||  ||| |||      |||| ||||||| ||||||||||||| |||    
T  1722604 gtttcaaaagtttcaaatatgtcattttagtttataaattat-----ttctctctgttgtgagttaataattaattgatgttaatgtagccgttaaattg 1722698  T
Q  403 ttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    |||||||||||| |||| || | ||||||||||| ||||||||||||| | ||| || |||| ||||||||    
T  1722699 ttgacttggatcaaaacgctgccttttaaaagcttcagggtgtcaaaatgttacattcaatgatcacaaat 1722769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 266 - 495
Target Start/End: Original strand, 18237919 - 18238139
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtc 363  Q
    |||||||||||| |||||| | |||||| || |||||||||||||||||| ||||| || |||||| |||||||| ||  |||| ||||||| |  ||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagttgataaaatatttcactgttacccatgttgtc 18238018  T
Q  364 agtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaat 463  Q
     |||| |||||||| ||||||||||| |  ||||||||| ||||||||||  |||            || ||| ||||||||||||||| ||||||||||    
T  18238019 ggtcttcgtttaacagatgttgatgtggttgttaagttgatgacttggatgaaaa-----------taaggctacagggtgtcaaaacgttacgtttaat 18238107  T
Q  464 ggtcacaaatgttcatttatagtgctagaaag 495  Q
    | ||||||||| |||||||||| |||||||||    
T  18238108 gatcacaaatgatcatttatagagctagaaag 18238139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 264 - 498
Target Start/End: Complemental strand, 35891320 - 35891086
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactg 361  Q
    |||||||||||||| | |||| | ||||||||| ||||||||| |||||||||||||| ||| ||||  |||||||| ||  ||| |||||||||| |||    
T  35891320 tccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataagttttttttgttgataaactatttcagcgttacccctgctg 35891221  T
Q  362 tcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgttta 461  Q
    ||||||  |||||||||||| ||||||| |  | |||||||||||||| ||||  |  |  |  | || || |||||||||||||||||| |  |||| |    
T  35891220 tcagtcatcgtttaactgatcttgatgtggttgataagttgttgactttgatc--ataatgatgtgtttaaggctccagggtgtcaaaacaccgcgttca 35891123  T
Q  462 atggtcacaaatgttcatttatagtgctagaaagaca 498  Q
    ||||||||||||| |||||||||  ||||||| ||||    
T  35891122 atggtcacaaatgatcatttataaggctagaatgaca 35891086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 204 - 496
Target Start/End: Complemental strand, 38405654 - 38405380
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||| ||||||||  ||| ||| || ||||| |||| ||||||||||||| ||| ||||||||||  |||||||| ||   |||| ||||||    
T  38405654 tccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtttggcagaattctcaa---agtcctttaag 38405558  T
Q  304 ttttaaaagtttcaaataggttcttttatttgataaattatcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgt 403  Q
    |||||||         || || |||||| |||||||| |||     ||  || | |||||||||||||||||||| ||| ||||||| ||||||||||||    
T  38405557 ttttaaa---------tatgtccttttagttgataaactat-----ttcaccgtgctgtcagtctccgtttaactaatgctgatgtaaccgttaagttgt 38405472  T
Q  404 tgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaaga 496  Q
    | ||||||||| |||   |   ||||||||||||||  |||| |||||| |||||||||||| |||||||| ||||||||| |||||||||||    
T  38405471 taacttggatcaaaatgttgtattttaaaagctcca-tgtgttaaaacgttacgtttaatgggcacaaatgatcatttataatgctagaaaga 38405380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 6336126 - 6336263
Alignment:
Q  182 ataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagaga 281  Q
    ||||| |||||| || |||  |||||||||||||| |||||||| ||| |||||| ||||| |||||||||||| || |||||| ||||||||||| |||    
T  6336126 ataggataaataccattttcggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtttgaaaga 6336225  T
Q  282 attctaaagttagtcttttaagttttaaaagtttcaaa 319  Q
    |||   ||||||||| ||||||||| ||||||||||||    
T  6336226 atttccaagttagtcctttaagtttcaaaagtttcaaa 6336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 372 - 501
Target Start/End: Complemental strand, 18321170 - 18321042
Alignment:
Q  372 tttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaa 471  Q
    |||||| |||||||||||||||||||||| ||||| ||||||| |||   |   ||||||||| || |||||| ||||| ||||||||||||||||||||    
T  18321170 tttaacagatgttgatgtagccgttaagtagttga-ttggatcaaaatgttgtcttttaaaagttcgagggtgccaaaatgctacgtttaatggtcacaa 18321072  T
Q  472 atgttcatttatagtgctagaaagacaact 501  Q
    ||| ||||||||||||||| ||||||||||    
T  18321071 atgatcatttatagtgctacaaagacaact 18321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 206 - 319
Target Start/End: Original strand, 32660266 - 32660379
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtt 305  Q
    |||||||||| ||| |||| |||| |||||| ||||| ||||||||||||||| |||||| ||||||||||| |||||||  ||||||||| ||||||||    
T  32660266 cttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttagtcctttaagtt 32660365  T
Q  306 ttaaaagtttcaaa 319  Q
    | ||||||||||||    
T  32660366 tcaaaagtttcaaa 32660379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 310 - 495
Target Start/End: Complemental strand, 26276021 - 26275834
Alignment:
Q  310 aagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgac 407  Q
    |||||||||||| || |||||| |||||||  |||  |||||||||||||  | | |||||||||||||| |||  |||||||| || ||| ||  ||||    
T  26276021 aagtttcaaatatgtccttttagttgataagctatttcaccgttacccctgttcttagtctccgtttaaccgatactgatgtagtcgataaattactgac 26275922  T
Q  408 ttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaag 495  Q
    ||||||| |||  || | |||||||||||| |  ||||||||||| ||||||||||||||||||||| || |||||||| ||||||||    
T  26275921 ttggatcaaaatgctgccttttaaaagctctatagtgtcaaaacggtacgtttaatggtcacaaatgatcctttatagttctagaaag 26275834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 288 - 419
Target Start/End: Complemental strand, 18238373 - 18238240
Alignment:
Q  288 aagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttg 385  Q
    ||||||||| ||||||||| |||||||| ||||||||  ||||| ||||||||||||  ||||||||| |||||||||| | ||||||||||| ||| ||    
T  18238373 aagttagtcgtttaagtttcaaaagttttaaataggtcattttagttgataaattatttcaccgttactcctactgtcaatttccgtttaactcatgctg 18238274  T
Q  386 atgtagccgttaagttgttgacttggatccaaac 419  Q
    ||||  ||||||||||| ||||||| ||| ||||    
T  18238273 atgtgaccgttaagttgatgacttgaatcaaaac 18238240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 189 - 321
Target Start/End: Original strand, 14235558 - 14235688
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||||| |||| ||||||||||||||| | |||||| || |||||| ||||| ||  |||||||| ||||||||||||||||||||| |||||||| |    
T  14235558 aaatatcatttttggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtttgacagaattctca 14235657  T
Q  289 agttagtcttttaagttttaaaagtttcaaata 321  Q
    |||||||| |||  |||| | ||||||||||||    
T  14235658 agttagtccttt--gtttcacaagtttcaaata 14235688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 262 - 498
Target Start/End: Original strand, 32459430 - 32459659
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctac 359  Q
    |||||||||||||||| | |||||  ||||||||| ||||||||| |||||||| ||||||||  ||||| |||||||| |||  ||| ||||||| ||     
T  32459430 ggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttacccatat 32459529  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    |         ||||||| | |||||||| | |||||||||||| || ||| |||| |||| |||| ||||||| ||||||| |||||||||| || | ||    
T  32459530 t---------cgtttaattaatgttgatatggccgttaagttgctgccttagatcaaaacgctacattttaaaggctccagtgtgtcaaaactctgcatt 32459620  T
Q  460 taatggtcacaaatgttcatttatagtgctagaaagaca 498  Q
    ||||||||||||||  | |||||||  |||| |||||||    
T  32459621 taatggtcacaaataataatttatatggctaaaaagaca 32459659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 324
Target Start/End: Original strand, 32660194 - 32660324
Alignment:
Q  194 tcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagtta 293  Q
    |||||||| ||| ||||||||| ||| |||||  || ||| || ||||| |||| ||||||||||||| || |||||||||| | | |||||| ||||||    
T  32660194 tcacttttggtctttttagttttacataatttctaagttaatcctttaagtttcgaaagtttcaattatgttcttttagttttacaaaattctcaagtta 32660293  T
Q  294 gtcttttaagttttaaaagtttcaaataggt 324  Q
    ||| ||||||||| |||||||||||||||||    
T  32660294 gtcctttaagtttcaaaagtttcaaataggt 32660324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 494
Target Start/End: Original strand, 35890929 - 35891063
Alignment:
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| ||||| |   ||| ||| ||| || |  ||||||||| ||||||    
T  35890929 tgtcagtctccgtttaactgatgttaatgtggccgttaagttgttgacttgaatcaaaacaatgtgtttcaaaggcttcaagcagtcaaaacgttacgtt 35891028  T
Q  460 taatggtcacaaatgttcatttatagtgctagaaa 494  Q
    | |||| ||||||   |||||||||||||||||||    
T  35891029 tcatgggcacaaaaaatcatttatagtgctagaaa 35891063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 32459931 - 32459845
Alignment:
Q  187 ttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagt 273  Q
    ||||||| ||||||| |||||||| ||||||| ||||| ||||||||||||||||| ||| |||| |||||| ||||||||||||||    
T  32459931 ttaaataccacttttagtccttttcgtttgaccgaattctcaaattagtcttttaagttttaaaaatttcaaataggtccttttagt 32459845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 373 - 474
Target Start/End: Complemental strand, 19279170 - 19279069
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||| ||||||||||||||  ||||||||||| ||||||||| ||||  | | |||||||| |||||||||||||||||  ||| ||||||||||| |||    
T  19279170 ttaattgatgttgatgtagttgttaagttgttaacttggatcaaaacgttgcattttaaaatctccagggtgtcaaaacattacatttaatggtcataaa 19279071  T
Q  473 tg 474  Q
    ||    
T  19279070 tg 19279069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 26275494 - 26275611
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||| ||| || ||||||||||||||||||||  || |||||  ||||| ||||||||||||||| ||| || |||||||||||  ||||||  |    
T  26275494 aaatatcacgtttggtacttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtttgacggaattccca 26275593  T
Q  289 agttagtcttttaagttt 306  Q
    |||||||| || ||||||    
T  26275594 agttagtcattcaagttt 26275611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 373 - 479
Target Start/End: Original strand, 38405212 - 38405319
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactac-tttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaa 471  Q
    ||||||||||||||||||| | ||||||| |||||||||||| |||| || | |||| ||||||| || ||||||||||   ||||| ||||||||||||    
T  38405212 ttaactgatgttgatgtagtctttaagttattgacttggatcaaaacgctgcattttaaaaagcttcaaggtgtcaaaatattacgtgtaatggtcacaa 38405311  T
Q  472 atgttcat 479  Q
    ||| ||||    
T  38405312 atgatcat 38405319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 18951368 - 18951450
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattct 286  Q
    |||||||||||||| |||||| |||| |||||| ||||| ||| |||||||| || |||||| ||||||||||| ||||||||    
T  18951368 tccttttagtttgatagaattctcaagttagtcctttaagttttaaaagttttaaataggtcattttagtttgatagaattct 18951450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 195 - 293
Target Start/End: Original strand, 13538465 - 13538563
Alignment:
Q  195 cacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagtta 293  Q
    ||||||| ||||||||||||||||| ||||   || |||||| ||||  |||| |||||||||||||||||  |||||||||| |||||| | ||||||    
T  13538465 cacttttggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtttgatagaattttcaagtta 13538563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 35891320 - 35891266
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa 258  Q
    |||||||||||||||| ||||||||| |||||| ||||| |||||||||||||||    
T  35891320 tccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaa 35891266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 18951306 - 18951375
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||| |||||||  ||||||||| ||||||||| |||||||| |||||| | ||||||    
T  18951306 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatcctttta 18951375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 32459417 - 32459502
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||| || |||| ||||||||||||||||| ||||  ||| |||||| ||||| |||||||||||| || |||||| ||||||||    
T  32459417 aaatagcagttttggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagtt 32459502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 450
Target Start/End: Original strand, 38082621 - 38082800
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactg 361  Q
    |||||||||||| | |||||||| ||||||||||||||| |||||||         |||||  ||||| |||||||| |||  |||  ||||| ||  ||    
T  38082621 tccttttagtttcacagaattctcaagttagtcttttaaattttaaa---------taggtcattttagttgataaactatttcactattaccactgttg 38082711  T
Q  362 tcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaa 450  Q
    |||||||   |||||||||||||||||| || ||||| || || ||||||||| |||| || | ||||||| ||| |||||||||||||    
T  38082712 tcagtcttgatttaactgatgttgatgtggctgttaaattattcacttggatcaaaacgcttcattttaaaggcttcagggtgtcaaaa 38082800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 6336422 - 6336310
Alignment:
Q  229 aattagtcttttaaa-tttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttct 327  Q
    |||||||||||| || |||| |||||||||||||| | |||||| ||||  |||||||  ||||||||| ||||| ||| ||| |||||||||| || ||    
T  6336422 aattagtctttttaagtttcgaaagtttcaattagattcttttaatttgtcagaattcctaagttagtcctttaaatttcaaatgtttcaaatatgtcct 6336323  T
Q  328 tttatttgataaa 340  Q
    || | ||||||||    
T  6336322 ttcagttgataaa 6336310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 18321287 - 18321223
Alignment:
Q  249 aaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagt 313  Q
    |||||||||||||||| |||||| ||||| |||||| | ||||||||| ||||| ||||||||||    
T  18321287 aaagtttcaattaggttcttttaatttgacagaatttttaagttagtcctttaaattttaaaagt 18321223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 19279290 - 19279235
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaa 319  Q
    |||||||||||||| | |||||| |||||||| |||||||||| ||||||||||||    
T  19279290 tccttttagtttgacaaaattcttaagttagttttttaagtttcaaaagtttcaaa 19279235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 14235571 - 14235640
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||| | |||| | ||||||||| |||||||| ||||||||| || ||||| ||||||    
T  14235571 ggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtcctttta 14235640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 40744964 - 40745017
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaa 242  Q
    |||||||||||||  |||||||||||||| ||||||||||| ||| ||||||||    
T  40744964 aaatatcacttttgctccttttagtttgatagaattttcaagttaatcttttaa 40745017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 18237919 - 18237987
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||||||||||| || ||| || ||||| ||| |||||||| || || ||||||||||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagtt 18237987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 18238390 - 18238327
Alignment:
Q  211 agtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||| ||||| ||| |||||| ||||| |||||||||||| || |||||| ||||||||    
T  18238390 agtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaataggtcattttagtt 18238327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 6336146 - 6336208
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggt 324  Q
    |||||||||||||||  ||||||   ||||||||| ||||||||| |||||||| ||||||||    
T  6336146 ggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggt 6336208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 19279290 - 19279236
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa 258  Q
    |||||||||||||||| |||| | || ||||| |||||| |||||||||||||||    
T  19279290 tccttttagtttgacaaaattcttaagttagttttttaagtttcaaaagtttcaa 19279236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 480
Target Start/End: Original strand, 26275667 - 26275773
Alignment:
Q  374 taactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    ||| ||||| | |||||| |||||||||||| |||| |||| |||   | | |||||||||||| ||| |||||||| | |||||| | |||||||||||    
T  26275667 taattgatgctcatgtagtcgttaagttgttaacttagatcaaaatgatgccttttaaaagctctaggatgtcaaaaagttacgttcagtggtcacaaat 26275766  T
Q  474 gttcatt 480  Q
    | |||||    
T  26275767 gatcatt 26275773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 31814021 - 31813955
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    |||| ||||| ||| ||| ||||||||||||||||||||||  ||| |||||| ||||| |||||||    
T  31814021 aggtcaaataccacgtttggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaa 31813955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 38082621 - 38082663
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaattt 246  Q
    |||||||||||| |||||||| |||| ||||||||||||||||    
T  38082621 tccttttagtttcacagaattctcaagttagtcttttaaattt 38082663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 1722503 - 1722572
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||| | | |||||  ||||||||| ||||| ||| |||||||| |||||| ||||||||    
T  1722503 ggtccttttagtttaacaaaattcacaagttagtcctttaattttcaaaagttttaaatagattctttta 1722572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 501
Target Start/End: Complemental strand, 1722871 - 1722830
Alignment:
Q  460 taatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||    
T  1722871 taatggtcataaatgatcatttataatgctagaaagacaact 1722830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 1723044 - 1722932
Alignment:
Q  254 ttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgtt 351  Q
    ||||||||  |||||||||||| | | ||||   |||||||| ||||||||||||||||||| |||||  |  ||||| |||||||| ||  |||| |||    
T  1723044 ttcaattaaatccttttagtttaacaaaatttctaagttagtgttttaagttttaaaagttttaaatatatcattttagttgataaactatttcactgtt 1722945  T
Q  352 acccctactgtca 364  Q
    |||||| ||||||    
T  1722944 acccctgctgtca 1722932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 26276073 - 26276012
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    ||||| |||||||  |||||||||||||||| ||||| ||| |||||| ||||| |||||||    
T  26276073 aaataccacttttgatccttttagtttgacaaaatttccaagttagtcctttaagtttcaaa 26276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 27510156 - 27510119
Alignment:
Q  294 gtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||||||||||||||| || ||||||    
T  27510156 gtcttttaagttttaaaagtttcaaataagtcctttta 27510119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 40744979 - 40745024
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaa 309  Q
    |||||||||||||| |||||| | |||||| |||||||||||||||    
T  40744979 tccttttagtttgatagaattttcaagttaatcttttaagttttaa 40745024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 26275511 - 26275567
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaatag 322  Q
    |||||||||||| ||||||   ||||||||  ||||||||| |||||||||||||||    
T  26275511 cttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatag 26275567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 31814003 - 31813959
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    |||||||||||||||| |||||||  ||||||||| |||||||||    
T  31814003 ggtccttttagtttgacagaattcccaagttagtcatttaagttt 31813959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 6e-91; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 175 - 501
Target Start/End: Complemental strand, 10686862 - 10686534
Alignment:
Q  175 atatataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||| |||| ||||||| | ||||||||||||| ||    
T  10686862 atatataataggttaaatatcacttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtccttttactt 10686763  T
Q  275 tgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgt 372  Q
      | |||||||| ||||||||| |||||||||||||||||||||||||||  ||||| |||||||| ||  |||||||||||| |  |||||||||||||    
T  10686762 caacagaattctcaagttagtcatttaagttttaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccatgttgtcagtctccgt 10686663  T
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||||||||||||||| ||  || |||||||| ||||||||| |||   |   |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10686662 ttaactgatgttgatgcagttgtgaagttgtttacttggatcaaaatgttgtcttttaaaagctcgagggtgtcaaaacactacgtttaatggtcacaaa 10686563  T
Q  473 tgttcatttatagtgctagaaagacaact 501  Q
    || ||||||  ||||||||||||||||||    
T  10686562 tgatcatttgcagtgctagaaagacaact 10686534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 181 - 473
Target Start/End: Complemental strand, 29419191 - 29418893
Alignment:
Q  181 aataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagag 280  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||||||| || |||| ||||||||||||||||||||||||||||| ||    
T  29419191 aataggtcaaatatcacttttggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtttgacag 29419092  T
Q  281 aattctaaagttagtcttttaagttttaaaagtttcaaatag----gttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgttt 374  Q
    ||||| ||| |||||||||||||||| ||||||||||||||     ||  ||||| |||||||||||  ||||||||| ||||  | |||||||| || |    
T  29419091 aattccaaaattagtcttttaagtttcaaaagtttcaaataaataagtcattttagttgataaattacttcaccgttatccctggtatcagtctctgtat 29418992  T
Q  375 aactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||| |||   |||||||| |||||||||||||| ||| ||||||||||  ||||||||    
T  29418991 aactaatgctgatgtagccgttaagttgttgacttggatcaaaatactgtcttttaaaaactccagggtgtcaacacgttacgtttaatcatcacaaat 29418893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 204 - 501
Target Start/End: Original strand, 34254504 - 34254802
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    ||||||||||||||||||||| |||| || ||| |||||  ||||||||||| || ||| |||||||||||||| |||||||  |||| |||| ||||||    
T  34254504 tccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtttgacagaattcctaagtcagtcctttaag 34254603  T
Q  304 ttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagtt 401  Q
    ||| ||||||||||||||  | |||||| | |||||| ||  |||| |||||||||  ||||||| |||||||||||||||||||||||| || ||||||    
T  34254604 tttcaaaagtttcaaatatatgcttttagtcgataaactatttcactgttacccctgttgtcagtatccgtttaactgatgttgatgtagtcg-taagtt 34254702  T
Q  402 gttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    ||||||||||||| |||  || | ||||||||||| || ||||| ||||||||| |||||||||||||||| | |||||| |||||||||||||||||||    
T  34254703 gttgacttggatcaaaatgctgccttttaaaagcttcatggtgttaaaacgctatgtttaatggtcacaaacgatcatttctagtgctagaaagacaact 34254802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 189 - 474
Target Start/End: Original strand, 27351041 - 27351331
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||| ||| ||| ||||| ||||||||||||  ||| |||||| ||||| |||| ||||||||||||| ||||||||||||||| | |||||| |    
T  27351041 aaataccacgtttggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataattctca 27351140  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||| ||||||||| |||||| ||||||| ||  ||||| |||||||| ||  |||||||||||||| ||||||||      ||||||||||||||    
T  27351141 agttagtcctttaagtttcaaaagtatcaaataagtcattttagttgataaactatttcaccgttacccctgctgtcagttaataattaactgatgttga 27351240  T
Q  387 tgtagccgttaag---ttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatg 474  Q
    | |||||||||||   ||||||||||| ||| |||   | | ||||||||| | ||||||||||||||| |||||||||| ||||||||||    
T  27351241 tatagccgttaagtttttgttgacttgaatcaaaatgttgccttttaaaagatacagggtgtcaaaacgttacgtttaatcgtcacaaatg 27351331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 204 - 471
Target Start/End: Original strand, 49650578 - 49650839
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||||||| |||| |||| |||||| |||||||||  ||| ||||||||||||||||||||||||| |||||||| ||||||||| |||       
T  49650578 tccttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtttgacagaattctcaagttagtccttt--- 49650674  T
Q  304 ttttaaaagtttcaaataggttcttttatttgataaa--ttatcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagtt 401  Q
          |||||||||||||||||||||| ||||||||   | ||||  |||||||| |||||| | || |||||||||||| ||||||||||||||||||    
T  49650675 -----taagtttcaaataggttcttttagttgataaaccatttcactattacccctgctgtcaatatctgtttaactgatgctgatgtagccgttaagtt 49650769  T
Q  402 gttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaa 471  Q
    ||||| ||||||| |||   |   ||||||||| | ||||||||||||||| ||||||||||| ||||||    
T  49650770 gttgatttggatcaaaatgttgtcttttaaaagtttcagggtgtcaaaacgatacgtttaatgatcacaa 49650839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 262 - 494
Target Start/End: Complemental strand, 8903340 - 8903106
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctac 359  Q
    |||| ||||||||||| | |||||| |||||| || |||||||||  |||||||||||||  |  ||||| ||| ||||||||  ||| |||||||||      
T  8903340 ggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagttgctaaattatttcactgttacccctgt 8903241  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||| |||   | | ||||||||| || ||||||| ||||||||| |||    
T  8903240 tgtcagtctccgtttagctgatgttgatgaagccgttaaattgttaacttggatcaaaatggtgccttttaaaagttcgagggtgtaaaaacgctaagtt 8903141  T
Q  460 taatggtcacaaatgttcatttatagtgctagaaa 494  Q
    ||||||||| ||||| ||||||||||| |||||||    
T  8903140 taatggtcataaatgatcatttatagtcctagaaa 8903106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 244 - 480
Target Start/End: Original strand, 8902806 - 8903044
Alignment:
Q  244 tttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta 343  Q
    |||| ||||||||||||| ||| ||||||||||| | |||||  ||||||||| ||||||||| |||||||| ||||| || |||||| |||||||||||    
T  8902806 tttcgaaagtttcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagttgataaatta 8902905  T
Q  344 t--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagg 441  Q
    |  ||| |||||||||  ||||  |      |||||||||| ||||||||||||||||||||||||||||||| ||||  | | ||||||||||||||      
T  8902906 tttcactgttacccctgttgtcgattaataattaactgatgctgatgtagccgttaagttgttgacttggatcaaaacgatgccttttaaaagctccacc 8903005  T
Q  442 gtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    ||||||||||| |||||||||| ||||||| || |||||    
T  8903006 gtgtcaaaacgttacgtttaatcgtcacaagtgatcatt 8903044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 350 - 501
Target Start/End: Original strand, 37663199 - 37663350
Alignment:
Q  350 ttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaa 449  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| |||||||| |||   |   |||||||||||| | |||| ||||    
T  37663199 ttacccctgctgtcagtctccgtttaactgatgttggtgtagccgataagttgttgtcttggatcaaaatgttgtcttttaaaagctcgaaggtgacaaa 37663298  T
Q  450 acgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  37663299 atgctacgtttaatggtcacaaatgatcatttatagtgctagaaagataact 37663350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 17898988 - 17898850
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    ||||| ||||| ||||||| |||||||||||||||||  ||| ||||||||||  ||||| ||| |||| ||||||||||||||||||||||||| ||||    
T  17898988 taggtcaaataccacttttggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtttgatagaa 17898889  T
Q  283 ttctaaagttagtcttttaagttttaaaagtttcaaata 321  Q
    |||  || |||||| ||||||||| ||||||||||||||    
T  17898888 ttcacaaattagtcctttaagtttcaaaagtttcaaata 17898850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 179 - 498
Target Start/End: Complemental strand, 27351679 - 27351367
Alignment:
Q  179 ataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgag 278  Q
    |||| |||| |||||  |||||| ||||||||| ||||||| |||| |||| ||  |  ||||| |||| ||||||| ||||| ||| ||||| |||||     
T  27351679 ataaaaggtcaaatacaacttttggtccttttaatttgacataattctcaagttgatactttaagtttcgaaagttttaattatgtcgttttattttgat 27351580  T
Q  279 agaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaa 376  Q
    |||||||| || |||||| |||||||||         ||||||||| |||||| |||||||| |||  |||  ||||||||   ||||||      ||||    
T  27351579 agaattctcaaattagtcctttaagttt---------caaataggtgcttttacttgataaactatttcactattacccctgtcgtcagttaataattaa 27351489  T
Q  377 ctgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgtt 476  Q
     ||||| |||||||||||||||||||||||||| |||| |||   |  ||||||||||||| |||||||| ||| ||||  ||||||||||||||||| |    
T  27351488 gtgatgctgatgtagccgttaagttgttgactttgatcaaaatgttgttttttaaaagctctagggtgtcgaaatgctaattttaatggtcacaaatgat 27351389  T
Q  477 catttatagtgctagaaagaca 498  Q
    ||||||||||||||||||||||    
T  27351388 catttatagtgctagaaagaca 27351367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 189 - 411
Target Start/End: Complemental strand, 48352876 - 48352652
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||||||| ||||||||||||||||||||||  | | |||||||||||| |||| |||| ||||||||||||  |||||||||| | |||||  |    
T  48352876 aaataccacttttggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtttgacataattccca 48352777  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||| ||||||||| |||||||| ||||||||  ||||| |||||||| ||  |||| ||||||| | ||||||||      |||||||||    |    
T  48352776 agttagtcctttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttacccttgctgtcagttaataattaactgataccaa 48352677  T
Q  387 tgtagccgttaagttgttgacttgg 411  Q
    ||||||||||||||| |||||||||    
T  48352676 tgtagccgttaagttattgacttgg 48352652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 44964130 - 44964018
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    |||||||||||||||||| |||| ||| || ||||| ||| ||||||||||| |||||||||||||||||| |||||||| ||||||||| ||||| |||    
T  44964130 ttttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttagtcctttaaattt 44964031  T
Q  307 taaaagtttcaaa 319  Q
    |||||||||||||    
T  44964030 taaaagtttcaaa 44964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 473
Target Start/End: Complemental strand, 49650965 - 49650865
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||| |||||||||||||| |||||||||||||||||||||| |||| || | |||||||| |||||||||||||||| |||||||||||||||||||||    
T  49650965 ttaattgatgttgatgtagtcgttaagttgttgacttggatcaaaacgctgccttttaaaatctccagggtgtcaaaatgctacgtttaatggtcacaaa 49650866  T
Q  473 t 473  Q
    |    
T  49650865 t 49650865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 204 - 331
Target Start/End: Complemental strand, 44964192 - 44964066
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    ||||||||||| |||| |||| |||| ||||||||| || |||| |||||||||||||| || ||||||||||| |||||||| |||||| || ||||||    
T  44964192 tccttttagttagacaaaattctcaagttagtcttt-aagtttcgaaagtttcaattagatcattttagtttgacagaattctcaagttattcctttaag 44964094  T
Q  304 ttttaaaagtttcaaataggttctttta 331  Q
    ||||||||||||||||||||| ||||||    
T  44964093 ttttaaaagtttcaaataggtcctttta 44964066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 11897827 - 11897947
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaat 283  Q
    |||| ||||| ||||||| ||| |||||||||||||||||| |||| |||||| ||||| |||| ||||||||||||||||||||||||||||| |||||    
T  11897827 aggtcaaataccacttttggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgacagaat 11897926  T
Q  284 tctaaagttagtcttttaagt 304  Q
    ||  |||||| || |||||||    
T  11897927 tcccaagttaatcctttaagt 11897947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 1766044 - 1765930
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||| ||| ||||||||||| |||| ||| | ||||||| |||||| ||    
T  1766044 ttttaatttgacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctcatgttagtcctttaagctt 1765945  T
Q  307 taaaagtttcaaata 321  Q
     ||||||||||||||    
T  1765944 caaaagtttcaaata 1765930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 191 - 306
Target Start/End: Original strand, 10685840 - 10685955
Alignment:
Q  191 atatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaag 290  Q
    ||||||| ||| ||||||||||||||||||||||||||| |||||| ||||| |||| || |||||||||| ||| ||||||||||| ||||||   |||    
T  10685840 atatcacatttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtttgacagaatttccaag 10685939  T
Q  291 ttagtcttttaagttt 306  Q
    |||||| |||||||||    
T  10685940 ttagtcctttaagttt 10685955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 481
Target Start/End: Original strand, 39302338 - 39302549
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtc 363  Q
    |||||||||||| |||||||  || ||| |  ||||||||| ||||||||| | |||||||||||| |||||||| |||  |||||||||  ||  ||||    
T  39302338 cttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagttgataaactatttcaccgttactgctgttgtc 39302437  T
Q  364 agtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaat 463  Q
     ||||||||| |||||||||      | |||| || ||||| || |||||| |||   | | ||||||||||| ||||||||||||||||||||||||||    
T  39302438 ggtctccgttaaactgatgt------aaccgtgaaattgttaacgtggatcaaaatgttgccttttaaaagcttcagggtgtcaaaacgctacgtttaat 39302531  T
Q  464 ggtcacaaatgttcattt 481  Q
    ||||||||||| ||||||    
T  39302532 ggtcacaaatggtcattt 39302549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 189 - 474
Target Start/End: Complemental strand, 39302822 - 39302545
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||| ||| |||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||| ||  || ||||||||| | | |||| | |    
T  39302822 aaataccacgtttggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaactatatcgttttagtttaacaaaattttca 39302723  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    ||||| ||       ||| ||| ||||||||||| |||||||| |||||||||||  |||| |||| || | || |||||       |||||||||  ||    
T  39302722 agttactc------ctttcaaatgtttcaaatagcttcttttagttgataaattatttcactgttagccatgctatcagttaataactaactgatgcaga 39302629  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatg 474  Q
    |||||||||||||||||||||||||||    ||  |   ||||||||||| ||||||||||||| |  ||||||||||||||||||||    
T  39302628 tgtagccgttaagttgttgacttggat----acgttgtcttttaaaagcttcagggtgtcaaaatgtcacgtttaatggtcacaaatg 39302545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 373 - 480
Target Start/End: Original strand, 10686372 - 10686479
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||||||||| ||||||||||||||||||||||||||| ||| ||| | | | ||||||||||||  ||||||||||||  |||||||||| ||||||||    
T  10686372 ttaactgatgctgatgtagccgttaagttgttgacttgtatcaaaatattgccttttaaaagctctggggtgtcaaaacattacgtttaatcgtcacaaa 10686471  T
Q  473 tgttcatt 480  Q
    || |||||    
T  10686472 tgatcatt 10686479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 17898908 - 17898794
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||| ||||||  |||||||||| ||||| ||||||||||||||| || ||| ||||||||||| |||||| | || |||||| |||||    
T  17898908 gtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattagtcctttaa 17898809  T
Q  303 gttttaaaagtttca 317  Q
     ||| ||||||||||    
T  17898808 atttcaaaagtttca 17898794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 310 - 487
Target Start/End: Complemental strand, 4772659 - 4772481
Alignment:
Q  310 aagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgac 407  Q
    ||||||||||||  |||||||| |||||||| |||  || |||||||| |  ||||||||| |||||||||||| |||||||||| || ||||||||||     
T  4772659 aagtttcaaataaattcttttagttgataaactatttcatcgttacccttgttgtcagtcttcgtttaactgatattgatgtagctgtgaagttgttgat 4772560  T
Q  408 ttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtg 487  Q
    || |||| |||   | | |||||||||||  |||||||||||| | || ||||||||| |||||||  ||||||||||||    
T  4772559 ttagatcaaaatgttgccttttaaaagcttgagggtgtcaaaa-gttatgtttaatggccacaaataatcatttatagtg 4772481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 373 - 480
Target Start/End: Original strand, 4772269 - 4772375
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||| ||||| ||||||| || |||||||||||||||||||| |||| || | ||||||||||| |  |||||||||||| |||||||||||||||||||    
T  4772269 ttaattgatgatgatgtaaccattaagttgttgacttggatcgaaactctgccttttaaaagcttc-tggtgtcaaaacgttacgtttaatggtcacaaa 4772367  T
Q  473 tgttcatt 480  Q
    || |||||    
T  4772368 tgatcatt 4772375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 310 - 474
Target Start/End: Complemental strand, 4030766 - 4030600
Alignment:
Q  310 aagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgac 407  Q
    |||||||||||||||  ||||| ||| |||| |||  |||| |||| | |  ||| ||||||| ||||||||||| | || ||| ||||||||| |||||    
T  4030766 aagtttcaaataggtcattttagttggtaaactatttcacctttactcatgttgtaagtctccatttaactgatgctaatataggcgttaagtttttgac 4030667  T
Q  408 ttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatg 474  Q
    ||  ||| ||| |||   |||||||||||  |||||||||||||||| |||||||||||||||||||    
T  4030666 tttaatcaaaatactgtattttaaaagcttgagggtgtcaaaacgctgcgtttaatggtcacaaatg 4030600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 473
Target Start/End: Complemental strand, 34254946 - 34254863
Alignment:
Q  389 tagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    |||||||||||||||||||||| ||| |||| ||   ||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  34254946 tagccgttaagttgttgacttgtatcaaaacgctgtcttttaaaagcttcagg-tgtcaaaacgttacgtttaatggtcacaaat 34254863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 305 - 413
Target Start/End: Original strand, 48352306 - 48352416
Alignment:
Q  305 tttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttg 402  Q
    ||||||||||||||||||||||||||| |||||||| ||  |||||| ||||||| |||||| |      |||||| | | |||||||||||||||||||    
T  48352306 tttaaaagtttcaaataggttcttttagttgataaactatttcaccgctacccctgctgtcaattaataattaactcaggctgatgtagccgttaagttg 48352405  T
Q  403 ttgacttggat 413  Q
    |||||||||||    
T  48352406 ttgacttggat 48352416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 1765674 - 1765834
Alignment:
Q  179 ataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgag 278  Q
    ||||||||| ||||| ||||||| |||||||||||||||  |||||   || ||||| |||||| |||| ||| ||| ||| ||||| | |||||||||     
T  1765674 ataataggtcaaataccacttttagtccttttagtttgaacgaattcctaagttagt-ttttaagtttcgaaaattttaatcaggtcatgttagtttgac 1765772  T
Q  279 agaa-ttctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    | || ||||||| |||||| ||||||||| |||||||| |||||| | |||||| ||||||||    
T  1765773 ataatttctaaa-ttagtcctttaagtttcaaaagttttaaatagatccttttagttgataaa 1765834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 375 - 480
Target Start/End: Original strand, 4030420 - 4030525
Alignment:
Q  375 aactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatg 474  Q
    |||||||| |||| ||||| ||||||||||||||| |||| ||||||| | ||||||||| |||| | |||  ||||| |||||||||| ||||| ||||    
T  4030420 aactgatgctgatctagccattaagttgttgactttgatcaaaacactgccttttaaaagttccatgatgtagaaacgttacgtttaatcgtcaccaatg 4030519  T
Q  475 ttcatt 480  Q
     |||||    
T  4030520 atcatt 4030525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 484
Target Start/End: Original strand, 2965499 - 2965716
Alignment:
Q  267 ttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtca 364  Q
    |||||||||||  ||||| | ||||||  | ||||||||| |||||||| ||||| ||  ||||| |||||||| |||  ||||| |||  || || |||    
T  2965499 ttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgctacatctgct-tca 2965597  T
Q  365 gtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatg 464  Q
    ||||| ||||||||||||||||||| | | |||||||||| || | |||| ||||  | | |||  || |||| |||   |||||||||| |||||||||    
T  2965598 gtctc-gtttaactgatgttgatgtgggcattaagttgttaacatagatcaaaacgatgcgtttataaggctctaggtaatcaaaacgctgcgtttaatg 2965696  T
Q  465 gtcacaaatgttcatttata 484  Q
    |||||||||| |||||||||    
T  2965697 gtcacaaatgatcatttata 2965716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 311
Target Start/End: Original strand, 35701450 - 35701553
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||||||| |||||||||| || ||| | ||||||||||||||||||| || ||  | |||||| ||||| | |||||| ||||||||||||||| |||    
T  35701450 ttttagtttaacagaatttttaagttaat-ttttaaatttcaaaagttttaaataaattcttttaatttgacataattctcaagttagtcttttaaattt 35701548  T
Q  307 taaaa 311  Q
    |||||    
T  35701549 taaaa 35701553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 321
Target Start/End: Original strand, 44963822 - 44963961
Alignment:
Q  182 ataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagaga 281  Q
    ||||| ||||||  ||||||  || ||||||||||| ||| || | || | |||| ||||| |||| ||||||||||| | ||||||||||||||| ||     
T  44963822 ataggctaaatactacttttgatctttttagtttgatagatttctaaagtaagtcctttaagtttcgaaagtttcaataaagtccttttagtttgatagg 44963921  T
Q  282 attctaaagttagtcttttaagttttaaaagtttcaaata 321  Q
    ||||  || |||||| ||||||||| |||||||| |||||    
T  44963922 attcccaaattagtcctttaagtttcaaaagttttaaata 44963961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 44964074 - 44964019
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa 258  Q
    |||||||||||||||||||||| |||| |||||| ||||||||| |||||||||||    
T  44964074 gtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaa 44964019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 494
Target Start/End: Complemental strand, 48352574 - 48352523
Alignment:
Q  443 tgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaa 494  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  48352574 tgtcaaaatgctacatttaatggtcacaaatgatcatttatagtgctagaaa 48352523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 11897845 - 11897914
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||| ||||||||||| |||||||| ||||||||| |||||||||  |||||||||| ||||| ||||||    
T  11897845 ggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtcctttta 11897914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 39302321 - 39302406
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||| |||||||  | |||||||||||||||||||  ||||||| |  ||||| ||||||||||||| ||||||| |||||||||    
T  39302321 aaataccacttttgtttcttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagtt 39302406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 498
Target Start/End: Complemental strand, 2965884 - 2965753
Alignment:
Q  366 tctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatgg 465  Q
    |||| |||||| |||||||  ||| |||||||||||| ||||||| ||| ||||  |   ||| ||| ||| ||||  ||||||||| |  |||||||||    
T  2965884 tctctgtttaattgatgttattgtggccgttaagttgctgacttgaatc-aaacgatgtgtttcaaaggcttcaggtagtcaaaacgatgtgtttaatgg 2965786  T
Q  466 tcacaaatgttcatttatagtgctagaaagaca 498  Q
    ||||||||| |||||||||| ||||||||||||    
T  2965785 tcacaaatgatcatttatagggctagaaagaca 2965753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 4030310 - 4030390
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtcc-ttttagtttgagagaattc 285  Q
    |||||||||||||| |||| | || ||| || ||||| |||| |||||||||||||||||| ||||||||||| |||||||    
T  4030310 cttttagtttgacaaaattcttaagttaatcctttaagtttcgaaagtttcaattaggtcctttttagtttgacagaattc 4030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 1765984 - 1765885
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    |||||||||||||||| | |||  |||||| |||||  |||||||||||||| || ||| ||||||||||| ||||||   |||||| || |||||||||    
T  1765984 ttttagtttgacagaaatctcatgttagtcctttaagcttcaaaagtttcaaataagtcattttagtttgacagaatttccaagttactcctttaagttt 1765885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 4772697 - 4772650
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    ||||||||||||||||||||||| ||| |||||| ||||| |||||||    
T  4772697 gtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 4772650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 8902829 - 8902896
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||| ||||  ||| |||||| ||||| |||||||||||| || || ||||||||||||    
T  8902829 ttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagtt 8902896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 49651093 - 49651018
Alignment:
Q  231 ttagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    |||||| || || |||| ||||||| || ||| || ||||||||||| |||||||| ||||||||| |||||||||    
T  49651093 ttagtccttcaagtttcgaaagttttaaatagatcattttagtttgacagaattctcaagttagtcctttaagttt 49651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 2965481 - 2965566
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||| || |||| ||| |||||||||||| |||||||||| |||  | ||||| |||||||||||| || || ||| ||||||||    
T  2965481 aaataccaatttttgtctttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaatatgtcattttagtt 2965566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 17898969 - 17898900
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||| |  ||||| || |||||  |||||||||||||| |||||| ||||| ||||||    
T  17898969 ggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtcctttta 17898900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 34255070 - 34254998
Alignment:
Q  251 agtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggt 324  Q
    ||||||||||||||   |||||||||| ||||||   |||||||  |||||||||| |||||||||||||||||    
T  34255070 agtttcaattaggtatatttagtttgacagaatttccaagttaga-ttttaagtttcaaaagtttcaaataggt 34254998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 330
Target Start/End: Original strand, 4030310 - 4030374
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttt 330  Q
    |||||||||||| | |||||| |||||| || |||||||||  |||||||||| ||||| |||||    
T  4030310 cttttagtttgacaaaattcttaagttaatcctttaagtttcgaaagtttcaattaggtcctttt 4030374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 10685911 - 10685959
Alignment:
Q  202 cgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    |||| ||||||||||||||||||| ||| |||||| ||||| |||||||    
T  10685911 cgtctttttagtttgacagaatttccaagttagtcctttaagtttcaaa 10685959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 34255053 - 34254998
Alignment:
Q  208 tttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggt 264  Q
    |||||||||||||||||| ||| ||||  |||||| ||||||||||||||| |||||    
T  34255053 tttagtttgacagaatttccaagttaga-ttttaagtttcaaaagtttcaaataggt 34254998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 49650637 - 49650685
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagt-cttttaaatttcaaa 250  Q
    |||||||||||||||||||||| |||| ||||| ||||||| |||||||    
T  49650637 gtccttttagtttgacagaattctcaagttagtccttttaagtttcaaa 49650685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 1e-88; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 174 - 480
Target Start/End: Complemental strand, 30576818 - 30576510
Alignment:
Q  174 aatatataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagt 273  Q
    |||||||| |||| ||||||  || |||  |||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||    
T  30576818 aatatatactaggctaaatactacgtttgatccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagt 30576719  T
Q  274 ttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccg 371  Q
    |||| |||||||  ||||||||| ||||||||| |||||||| ||||| ||  ||||| |||||||| |||  |||||||||||||  ||| ||||||||    
T  30576718 ttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacccctgttgtgagtctccg 30576619  T
Q  372 tttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaa 471  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||||| |||||||||| ||||||     
T  30576618 tttaactgatgtcgatgtagccgttaagttgttgacttggatcaaaacattgccttttaaaagctccagggtgtcaaaacgttacgtttaatcgtcacag 30576519  T
Q  472 atgttcatt 480  Q
    ||| |||||    
T  30576518 atgatcatt 30576510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 189 - 501
Target Start/End: Original strand, 30576141 - 30576455
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||||||| ||| |||||| |||||||||||  ||| |||||| |||||||||  ||||||||||||| ||||||||||||||  ||||||   |    
T  30576141 aaatatcacttttggtctttttagcttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtttgccagaatttcca 30576240  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||||||||||||| ||||||||||||| |||  ||||| |||||||| ||  ||||  |||||| |  |||||||||||||||||||||||||||    
T  30576241 agttagtcttttaagtttgaaaagtttcaaattggtctttttagttgataaactatttcactattacccttgttgtcagtctccgtttaactgatgttga 30576340  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    |||||||||||||||||||||||| ||| |||   | | ||||||||||||  |||||||||||| |||||||||||||||||||||| ||| |||||||    
T  30576341 tgtagccgttaagttgttgacttgaatcaaaatgttgccttttaaaagctcgggggtgtcaaaacactacgtttaatggtcacaaatgatcagttatagt 30576440  T
Q  487 gctagaaagacaact 501  Q
    |||| ||||||||||    
T  30576441 gctataaagacaact 30576455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 188 - 494
Target Start/End: Original strand, 8713834 - 8714142
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    |||||| ||||||| ||||||||||||||||| |||| |||| |||||| ||||| ||||||||||||||||||  | |||||||||||| | |||||      
T  8713834 taaataccacttttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaattcac 8713933  T
Q  288 aagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttg 385  Q
    ||||||||||||||||||| |||| |||||||||| |  ||||| |||||||||| |  ||||||||||| |  || ||||  || |||| |||||| |     
T  8713934 aagttagtcttttaagtttcaaaaatttcaaatagatcattttagttgataaattgtttcaccgttacccatgttggcagtaaccatttagctgatgcta 8714033  T
Q  386 atgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatag 485  Q
    ||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  8714034 atgtagccgttaagttgttgacttgaatcaaaatgctactttttaaaagctccagggtatcaaaacactacgtttaatggtcacaaatgatcatttatag 8714133  T
Q  486 tgctagaaa 494  Q
    |||||||||    
T  8714134 tgctagaaa 8714142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 189 - 498
Target Start/End: Original strand, 9276471 - 9276783
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagt-cttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    ||||||||||||| ||||||||||||||||| |||| ||||| |||| ||||||| |||  ||||||||||||||||| || |||||||| ||||||||     
T  9276471 aaatatcacttttggtccttttagtttgacaaaattctcaaaatagttcttttaagttttgaaagtttcaattaggtctttatagtttgacagaattctc 9276570  T
Q  288 aagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttg 385  Q
    |||||||||  |||||||||||||||||||||||||| |||||| |||||||| ||  |||| |||||| || ||||||| ||| ||||||||||||||     
T  9276571 aagttagtcagttaagttttaaaagtttcaaataggtccttttagttgataaactatttcactgttacctcttctgtcaggctctgtttaactgatgttc 9276670  T
Q  386 atgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatag 485  Q
    |||||||| |||||||||||||||||||| |||   | | ||||||||| || ||| |||||||||| || |||||  ||||||||||| |||||||||     
T  9276671 atgtagcctttaagttgttgacttggatcaaaatgatgccttttaaaagttcgaggatgtcaaaacgttatgtttagcggtcacaaatgatcatttataa 9276770  T
Q  486 tgctagaaagaca 498  Q
    |||||||||||||    
T  9276771 tgctagaaagaca 9276783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 203 - 499
Target Start/End: Original strand, 39700888 - 39701185
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||||| |||| | || |||||| ||||| ||| |||||||||||||| ||||||||||||||| | |||||  |||||| || |||||    
T  39700888 gtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtttgacaaaattcctaagttaatcctttaa 39700987  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
    |||| |||||||||||||| ||  ||||| |||||||| ||  |||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||    
T  39700988 gtttcaaaagtttcaaatatgtcattttagttgataaactatttcaccgttacccctgctgtcagtcttcgtttaactaatgctgatgtagccgttaagt 39701087  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaa 499  Q
    |||||||||  ||| |||   | | |||||||||||| || ||||||||||||||||||||||||||| || || ||||||||| ||||||||||||||    
T  39701088 tgttgactt-tatcaaaatgttgccttttaaaagctcgagtgtgtcaaaacgctacgtttaatggtcataagtgatcatttataatgctagaaagacaa 39701185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 196 - 487
Target Start/End: Original strand, 16197025 - 16197317
Alignment:
Q  196 acttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagt 295  Q
    |||||| |||||||| ||||||||||||| |||| ||||||  |||| |||| ||||||||||||| ||||||||||||||| |||||||  |||||| |    
T  16197025 acttttggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtttgacagaattcccaagttaat 16197124  T
Q  296 cttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagcc 393  Q
    | ||||||||| |||||| |||||||||| |||||| || ||||||||  ||||| |||| |||  |||||||||||||||||||||||||||| ||||     
T  16197125 catttaagtttcaaaagtatcaaataggtccttttagttaataaattatttcaccattacgcctgttgtcagtctccgtttaactgatgttgatctagct 16197224  T
Q  394 gttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtg 487  Q
    ||||| ||||||||||||||| ||| | | | ||||||||||| || ||||||||||||||   ||||||||||||||||| ||||||||||||    
T  16197225 gttaaattgttgacttggatcaaaatattgccttttaaaagcttcaaggtgtcaaaacgct-tatttaatggtcacaaatgatcatttatagtg 16197317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 206 - 501
Target Start/End: Complemental strand, 23553994 - 23553698
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtt 305  Q
    ||||||||||||||||||| | || |||||||||||| |||| || |||| ||||| ||| ||||||||||| |||||||| ||||||||   | |||||    
T  23553994 cttttagtttgacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagtttgatagaattctcaagttagttcctcaagtt 23553895  T
Q  306 ttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgt 403  Q
    | ||||||||||||||| |  | ||| || ||||||||  |||| ||||||||| || | |||||||||||||||||||||||||||| | |||||||||    
T  23553894 tcaaaagtttcaaatagatcatgttagttaataaattatttcactgttacccctgctatgagtctccgtttaactgatgttgatgtagtctttaagttgt 23553795  T
Q  404 tgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    ||||||||||| |||   |  ||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  23553794 tgacttggatcaaaatgat-gtttttaaaagctcgagggtgtcaaaacacttcgtttaatggtcacaaatgatcatttatagtgctagaaagacaact 23553698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 204 - 480
Target Start/End: Original strand, 23553359 - 23553637
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    ||||||||||||||||||||| |||| ||  || ||||| |||| ||||||||||||||||||||||||||||| | |||||| ||||| |||||||||     
T  23553359 tccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattctcaagttggtcttttaaa 23553458  T
Q  304 ttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagtt 401  Q
    ||| |||||||||||||||||  ||||| |||||||| ||  |||||||||||||| ||||||||      |||||||||||||||||||||||||| ||    
T  23553459 tttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtcagttaataattaactgatgttgatgtagccgttaaatt 23553558  T
Q  402 gttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    ||||||||||||| ||||      ||||||||||||||||||||||||||| |||||||||| |||||||||| |||||    
T  23553559 gttgacttggatcaaaacgtcgtcttttaaaagctccagggtgtcaaaacgttacgtttaatcgtcacaaatgatcatt 23553637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 189 - 464
Target Start/End: Complemental strand, 44041431 - 44041154
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||| | |||| ||||||||||||||||| ||||||||| |||||| ||||| |||  ||||||||||||| ||||||||||||||| |||||||  |    
T  44041431 aaatattagtttttgtccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtttgacagaattccta 44041332  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    ||||||||||| |||||| |||| ||||||||| ||  ||||| |||||||| ||  ||||| |||||| |  ||||| ||||||||||||| ||| |||    
T  44041331 agttagtctttaaagtttcaaaaatttcaaataagtcattttagttgataaactatttcaccattacccatgatgtcaatctccgtttaacttatgctga 44041232  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatg 464  Q
    |||| | ||||||| ||||||||||||| |||  |||| ||||||||||| |||||||||||||||||||||||||||    
T  44041231 tgtaactgttaagtagttgacttggatcaaaatgctaccttttaaaagcttcagggtgtcaaaacgctacgtttaatg 44041154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 204 - 501
Target Start/End: Complemental strand, 25730252 - 25729953
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa-ttaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    |||||||||||||| ||||||| ||| |||||| ||||| |||  |||||||||| ||||||| ||||| ||||| |||||||| ||||||||| |||||    
T  25730252 tccttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtcattttaatttgacagaattctcaagttagtcctttaa 25730153  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
     ||| |||||||||||||| ||  ||||| |||||||| |||  ||| ||||||||| | |||||| ||||||||||||||| |||||||| ||||||||    
T  25730152 atttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttacccctgccgtcagtatccgtttaactgatgctgatgtagtcgttaagt 25730053  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaac 500  Q
    |||||||||||||| |||   ||| |||||||||||||| ||||| |||| || || ||||||  ||||||||| | ||||||||||| |||||||||||    
T  25730052 tgttgacttggatcaaaatgttaccttttaaaagctccatggtgt-aaaaagcaacttttaataatcacaaatgataatttatagtgccagaaagacaac 25729954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 206 - 501
Target Start/End: Complemental strand, 25737736 - 25737439
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa-ttaggtccttttagtttgagagaattctaaagttagtcttttaagt 304  Q
    |||||||||||| ||||||| ||| |||||| ||||| |||  |||||||||| ||||||| ||||| ||||| |||||||| ||||||||| ||||| |    
T  25737736 cttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtctttttaatttgacagaattctcaagttagtcctttaaat 25737637  T
Q  305 tttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttg 402  Q
    || ||||||||||||||  |  ||||| |||||||| |||  ||| ||||||||| | |||||| ||||||||||||||| |||||||| ||||||||||    
T  25737636 ttcaaaagtttcaaatatttcattttagttgataaactatttcactgttacccctgccgtcagtatccgtttaactgatgctgatgtagtcgttaagttg 25737537  T
Q  403 ttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    |||||||||||| |||   ||| |||||||||||||| ||||| |||| || || ||||||  ||||||||| | ||||||||||| ||||||||||||    
T  25737536 ttgacttggatcaaaatgttaccttttaaaagctccatggtgt-aaaaagcaacttttaataatcacaaatgataatttatagtgccagaaagacaact 25737439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 198 - 493
Target Start/End: Complemental strand, 14871482 - 14871194
Alignment:
Q  198 ttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagttt-gagagaattctaaagttagtc 296  Q
    |||| ||||||| ||||||||||||||   || |||||||||||| |||| |||||||||||||||| |||||||||| || | |||||| || ||||||    
T  14871482 ttttggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataattctcaaattagtc 14871383  T
Q  297 ttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccg 394  Q
     |||||||||         ||||||||| |||||| |||||||| ||  | | ||||| |||| |||||||||||||||||| ||||| |||||||| ||    
T  14871382 ctttaagttt---------caaataggtccttttagttgataaactatttaatcgtta-ccctgctgtcagtctccgtttaattgatgctgatgtagtcg 14871293  T
Q  395 ttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaa 493  Q
    |||||||||||||||||||| ||||  | | ||||||||||| ||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||    
T  14871292 ttaagttgttgacttggatcaaaacgatgccttttaaaagcttcagggtgtcgaaactctacgtttaatggtcacaaatgatcattcatagtgctagaa 14871194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 207 - 480
Target Start/End: Complemental strand, 9277109 - 9276841
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||||||||||||||||  ||| |||||||||||| |||| |||||||||||||| |||||||||||||| ||||||   ||||||||| |||||||||    
T  9277109 ttttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaatttccaagttagtcctttaagttt 9277010  T
Q  307 taaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgtt 404  Q
     |||||||||||||||| ||||||| |||||||| ||  |||||||||||| | ||||||||      ||||      ||||||||||| ||||||||||    
T  9277009 caaaagtttcaaatagg-tcttttagttgataaactatttcaccgttacccttgctgtcagttaataattaa------ttgatgtagccattaagttgtt 9276917  T
Q  405 gacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    |||||||| | |||| |||| |||||||||||||||||||| |||||| ||||||||||  ||||||||| |||||    
T  9276916 gacttggagcaaaacgctaccttttaaaagctccagggtgttaaaacgttacgtttaatcatcacaaatgatcatt 9276841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 188 - 480
Target Start/End: Original strand, 4613728 - 4614022
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    |||||||||| ||| ||||||||||||||| ||||||||||| ||| || |||||||||  ||||||||||||| ||||||||||||||| | |||| |     
T  4613728 taaatatcacatttggtccttttagtttgaaagaattttcaagttaatcctttaaattttgaaagtttcaattaagtccttttagtttgacaaaattttc 4613827  T
Q  288 aagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttg 385  Q
     |||||||| ||||||||| ||||||||||||||| |||||||| || ||||| ||  |||||| || |||| | ||||||      |||||||||| ||    
T  4613828 gagttagtcctttaagtttcaaaagtttcaaatagattcttttagtttataaactatttcaccgctaaccctgccgtcagttaataattaactgatgctg 4613927  T
Q  386 atgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    ||| ||||||||||||||||||||| ||| ||| | | | ||||||||| | || |||||||||||| |  ||||||| |||||||||| |||||    
T  4613928 atgcagccgttaagttgttgacttgaatcaaaatattgcattttaaaagttacaaggtgtcaaaacgttgtgtttaatcgtcacaaatgatcatt 4614022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 204 - 473
Target Start/End: Complemental strand, 8714482 - 8714210
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||||| ||||||| ||| |||||| |||||  |||||||||||||| ||| | |||||||||||| |||||||  |||||||| |||||||    
T  8714482 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 8714383  T
Q  304 ttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctact-gtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
    |||  ||||||| ||||||||  ||||| |||||||| |||  ||| |||||| || || ||||||      |||| |||||||||||||||||||||||    
T  8714382 tttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataattaattgatgttgatgtagccgttaagt 8714283  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    | |||||||||||| |||| || | ||||||||||||||||||  ||||||| ||||||||||||||| ||||    
T  8714282 tattgacttggatcaaaacgctgccttttaaaagctccagggtcacaaaacgttacgtttaatggtcaaaaat 8714210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 203 - 501
Target Start/End: Complemental strand, 40553368 - 40553077
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||||| |||||  || |||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| |||||| || |||      
T  40553368 gtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt-- 40553271  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
           ||||||||||||| |  ||||| |||||||| ||  |||||||||||| |  |||||||      |||| |||||||||| ||||||||||||    
T  40553270 -------aagtttcaaatagatcattttacttgataaactatttcaccgttacccttggtgtcagttaataattaattgatgttgatatagccgttaagt 40553178  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaac 500  Q
    |||||||||| ||| |||   |   ||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| || ||||||| ||||    
T  40553177 tgttgacttgtatcaaaatgttgtcttttaaaagctccagggtgtcaaaacgctacctttaatggtcacaaattatcatttatattgttagaaaggcaac 40553078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 189 - 473
Target Start/End: Complemental strand, 39701536 - 39701249
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||| ||| |||||||||||||||||||||| |||| |||||  ||||| |||||||||||||||||| ||||||||||||||| |||||||  |    
T  39701536 aaataccacgtttggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaattccca 39701437  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
      |||||| ||||||||| |||| |||||||||||| |||||| |||||||| ||  |||| ||||||||| || |||||      |||||||||| | |    
T  39701436 gattagtcatttaagtttcaaaactttcaaataggtccttttagttgataaactacttcactgttacccctgctatcagttaataattaactgatgctaa 39701337  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctc-cagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    | ||| |||||||||||||||||||||| |||  ||   ||||||||||||  |||||||||||| | |||||||||| |||||||||    
T  39701336 tttagacgttaagttgttgacttggatcaaaatgctgtcttttaaaagctctaagggtgtcaaaatgttacgtttaatcgtcacaaat 39701249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 262 - 485
Target Start/End: Complemental strand, 34686968 - 34686743
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctac 359  Q
    |||||||||| ||||| |||||| | ||||||||| ||||| |||||||||||| |||||||| |||||| |||||||| ||  |||||||||| | |||    
T  34686968 ggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaactatttcaccgttactcttac 34686869  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    ||||||||||||||||||  |||  ||| | || ||||||||| ||| ||||||| |||   | | ||||||| ||| |||||||||||||||||| |||    
T  34686868 tgtcagtctccgtttaacatatgacgatctggctgttaagttgctgatttggatcaaaatgttgcattttaaatgcttcagggtgtcaaaacgctaggtt 34686769  T
Q  460 taatggtcacaaatgttcatttatag 485  Q
    ||||||||| ||||| ||||||||||    
T  34686768 taatggtcaaaaatgatcatttatag 34686743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 182 - 340
Target Start/End: Original strand, 36359883 - 36360041
Alignment:
Q  182 ataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagaga 281  Q
    ||||| |||||| |||| || ||||||||||||||||||||||| ||| |||||| ||||| |||| ||||||||||||||||  ||||||||||| |||    
T  36359883 ataggctaaataccactcttggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtttgacaga 36359982  T
Q  282 attctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    ||||  ||||||||| |||||||||||||||||||||||||||  ||||| ||||||||    
T  36359983 attcccaagttagtcctttaagttttaaaagtttcaaataggtcattttagttgataaa 36360041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 203 - 472
Target Start/End: Original strand, 25737107 - 25737377
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||| ||||||||||||||  ||||||  ||||||||| |||||    
T  25737107 gtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattcctaagttagtcctttaa 25737206  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
     ||| |||||||||| ||| ||  ||||| |||||||| ||  ||| |||||| ||| ||||||||      |||| ||||||||||||| |||||||||    
T  25737207 atttcaaaagtttcacatatgtcattttacttgataaactatttcatcgttacacctgctgtcagttaataattaattgatgttgatgtaaccgttaagt 25737306  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||| | ||||||  ||||  | | ||||||||| | | ||||||||||||| || ||||||||||||||||    
T  25737307 tgttaaattggataaaaacgatgcattttaaaagtttc-gggtgtcaaaacgttaagtttaatggtcacaaa 25737377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 189 - 340
Target Start/End: Complemental strand, 9770929 - 9770778
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||||||| ||||||||||||||||| |||| |||| |||||| ||||| |||| ||||||||||||| ||| ||||||||||| |||||||  |    
T  9770929 aaataccacttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaattccca 9770830  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    |||||||| ||||| ||| ||||||||||||||||| |||||| ||||||||    
T  9770829 agttagtcctttaattttcaaaagtttcaaataggtccttttagttgataaa 9770778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 189 - 344
Target Start/End: Complemental strand, 29794401 - 29794246
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||||| |||| ||| ||||||||||||||||||  ||| |||||| |||||||||| |||||||  |||||||||||||||||||| | ||||   |    
T  29794401 aaatatcatttttggtcattttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtttgacataatttcca 29794302  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat 344  Q
    |||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||    
T  29794301 agttagtcttttaagtttcaaaagtttcaaatagatccttttagttgataaattat 29794246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 327 - 498
Target Start/End: Complemental strand, 5359075 - 5358902
Alignment:
Q  327 ttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactac 424  Q
    ||||| ||||||||||||  ||||||||| |||  |||||||||||||||||||||||||||||||||  ||||||||||||||| |||| |||  || |    
T  5359075 ttttagttgataaattatttcaccgttactcctgttgtcagtctccgtttaactgatgttgatgtagcttttaagttgttgactttgatcaaaaagctgc 5358976  T
Q  425 tttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagaca 498  Q
     ||||||||||||||| ||||| |||| ||| ||||||| | |||||||| ||||| ||||||| |||||||||    
T  5358975 cttttaaaagctccagagtgtcgaaacactatgtttaattgccacaaatgatcattcatagtgccagaaagaca 5358902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 262 - 484
Target Start/End: Complemental strand, 35434400 - 35434176
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctac 359  Q
    |||||||||||||||| | |||||  |||||| || ||||||||| |||||||||||||| ||  ||||| |||||||| |||  ||| | ||||| |      
T  35434400 ggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcacaggtacccatgt 35434301  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    |||||||||||||||||||||||  ||| | |||||||||||| ||||||||||| |||| || | |||||||  || ||| |||||||| || | ||||    
T  35434300 tgtcagtctccgtttaactgatgccgatttggccgttaagttgctgacttggatcaaaactctgcgttttaaagtcttcagtgtgtcaaatcgatgcgtt 35434201  T
Q  460 taatggtcacaaatgttcatttata 484  Q
    ||||||||||||| | |||||||||    
T  35434200 taatggtcacaaaagatcatttata 35434176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 189 - 468
Target Start/End: Complemental strand, 31169627 - 31169349
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||| ||| ||| ||||||||||||| |||| |||| |||||| ||||| ||| ||| ||||||| ||| || |||||||||||   |||||| |    
T  31169627 aaatatcacgtttggtcattttagtttgacaaaattctcaagttagtcctttaagttttaaa-gtttcaaatagatcattttagtttgacgaaattctca 31169529  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    | |||||| |||||||||||||||||||||||| ||  ||||| |||||||| ||  |||||||||||| |  |||||||      |||||||||| |||    
T  31169528 aattagtcctttaagttttaaaagtttcaaatatgtcattttagttgataaaatatttcaccgttacccgtgatgtcagttaataattaactgatgctga 31169429  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtca 468  Q
    |||  || |||||||||||||||||||| ||||  ||  ||||||||||||   |||||||||| | |||||||||| ||||    
T  31169428 tgtgaccattaagttgttgacttggatcaaaacgttatcttttaaaagctc--aggtgtcaaaatgttacgtttaatcgtca 31169349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 189 - 452
Target Start/End: Original strand, 40552751 - 40553016
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||| ||||||| ||||||||||||||||||||||| ||| || |||||||||  ||||||||||||| |   ||||||||||| | |||| | |    
T  40552751 aaataccacgtttcgtcgttttagtttgacagaattttcaagttaatcatttaaattttgaaagtttcaattaagatattttagtttgacaaaattttca 40552850  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||| | ||||| ||| |||| ||||||||||||||||| | |||||||| ||  |||| ||||||||| ||  ||||      |||| ||||| |||    
T  40552851 agttagccatttaaatttcaaaaatttcaaataggttctttaaattgataaaatatttcactgttacccctgctaccagttaataattaattgatgctga 40552950  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacg 452  Q
    | |||||||||| ||||| | || |||| ||| ||||  |||||||||||||||| ||||||||||    
T  40552951 tttagccgttaaattgttaatttcgatcaaaatactatattttaaaagctccaggttgtcaaaacg 40553016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 267 - 494
Target Start/End: Original strand, 13771425 - 13771654
Alignment:
Q  267 ttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtca 364  Q
    ||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||  ||||| || ||||| ||| ||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagttgataaactatttcaccatttcccctgctggca 13771524  T
Q  365 gtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatg 464  Q
    |||||| ||||||||||| | |||   | ||||||||| ||||||| ||| |||   | | ||| ||| |||| |||  ||||||| | | || ||||||    
T  13771525 gtctccatttaactgatgctaatgcgacagttaagttgctgacttgaatcaaaatgatgcgtttcaaaggctctaggtggtcaaaatgttgcgcttaatg 13771624  T
Q  465 gtcacaaatgttcatttatagtgctagaaa 494  Q
    |||||||||| ||| |||||| ||||||||    
T  13771625 gtcacaaatgatcaattatagggctagaaa 13771654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 262 - 495
Target Start/End: Complemental strand, 13771937 - 13771704
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctac 359  Q
    |||| ||||||||||| | |||||  ||||||||| ||||||||| |||||||||||||| ||  ||||||||||||||  ||  ||| ||||||  |||    
T  13771937 ggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttatttgataaaccatttcactgttacctttac 13771838  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
     | || ||| ||||||||||||| ||||||  | ||||||||| | ||| ||||| |||||||   |||||||  |||||||||||||||| | | ||||    
T  13771837 cgccactcttcgtttaactgatgctgatgtgactgttaagttgctaactaggatcaaaacactg--ttttaaagcctccagggtgtcaaaatgttgcgtt 13771740  T
Q  460 taatggtcacaaatgttcatttatagtgctagaaag 495  Q
    ||||||||| ||||| |||||||||  |||||||||    
T  13771739 taatggtcaaaaatgatcatttataaggctagaaag 13771704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 35433899 - 35434058
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctac 359  Q
    |||||||||| ||||| |||||||  ||||||||| ||||||||| |||||||| |||||| |  ||||| |||||||||||  |||| ||||||| | |    
T  35433899 ggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagttgataaattatttcactgttacccttgc 35433998  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaac 419  Q
    |||||||| |||||||||||||  | |||| | |||||||||||||||||||||| ||||    
T  35433999 tgtcagtcgccgtttaactgatactaatgtgggcgttaagttgttgacttggatcaaaac 35434058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 189 - 481
Target Start/End: Complemental strand, 6236372 - 6236087
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||||||  ||||||||||||| ||| ||||  ||| ||| |  ||||| |||||| ||||||||||||||||||||| ||||| ||| |||  |    
T  6236372 aaatatcactttcggtccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtccttttaatttgacagacttccca 6236273  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||  |||||||||         |||||||||  ||||| |||| ||| |||  || | |||||| |  ||||| |||| |||||||||||| |||    
T  6236272 agttagtactttaagttt---------caaataggtcattttaattgaaaaactatttcatctttacccatgatgtcaatctcggtttaactgatgctga 6236182  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcattt 481  Q
    |||   ||||||||||||||||| |||| |||| ||   ||||||| | | ||||||||||||| ||||||||||||||||||||| | ||||||    
T  6236181 tgttatcgttaagttgttgacttagatcaaaacgctgtcttttaaatgtttcagggtgtcaaaatgctacgtttaatggtcacaaacgatcattt 6236087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 264 - 502
Target Start/End: Original strand, 5358647 - 5358887
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactg 361  Q
    |||||||||||||| |||||| | ||||||||| || |||||| |||||||| |||||||| |||||| |||||||| ||  || | ||||||||| |||    
T  5358647 tccttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagttgataaactatttcgctgttacccctgctg 5358746  T
Q  362 tcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgttta 461  Q
    ||| ||||||||||||||||| | || | | |||| ||||| ||||||||||| ||||| |   ||| ||| | |  |||  ||||||||| | ||||||    
T  5358747 tcaatctccgtttaactgatgctaatatgggcgttgagttgctgacttggatcaaaacaatgtgtttcaaaggttttaggtagtcaaaacgatgcgttta 5358846  T
Q  462 atggtcacaaatgttcatttatagtgctagaaagacaactt 502  Q
     || ||||||| | |||||||||  |||| |||||||||||    
T  5358847 gtgctcacaaaagatcatttatacggctaaaaagacaactt 5358887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 267 - 480
Target Start/End: Original strand, 6235796 - 6236012
Alignment:
Q  267 ttttagtttgagagaattct-aaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtc 363  Q
    ||||||||||| |||||||  ||||||| || ||||| ||| |||||||||||||||  | ||||| |||||||| |||  |||| ||||| || |||||    
T  6235796 ttttagtttgacagaattccgaaagttaatcctttaaatttcaaaagtttcaaatagactattttagttgataaactatttcacctttacctctgctgtc 6235895  T
Q  364 agtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaat 463  Q
    |||      |||| ||||| |||||||||  |||||||||||||||||||| ||||  | | |||||||||||| ||||| |||||| | ||||||||||    
T  6235896 agttaataattaattgatgctgatgtagctattaagttgttgacttggatcaaaacgttgcattttaaaagctctagggtatcaaaatgttacgtttaat 6235995  T
Q  464 ggtcacaaatgttcatt 480  Q
    ||||||||||| |||||    
T  6235996 ggtcacaaatgatcatt 6236012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 36314790 - 36314697
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    ||||| ||||||| ||||||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  36314790 aaataccacttttggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtttgacagaa 36314697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 195 - 331
Target Start/End: Original strand, 39700819 - 39700956
Alignment:
Q  195 cacttttcgtccttttagttt-gacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagtta 293  Q
    |||||||  |||||||||||| |||| |||| | |  |||||||||||| |||  ||||||||||||||||||||||||||||| | |||||| ||||||    
T  39700819 cacttttgctccttttagttttgacaaaattcttatgttagtcttttaagttttgaaagtttcaattaggtccttttagtttgacaaaattcttaagtta 39700918  T
Q  294 gtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    ||| ||||||||||||||||||||| || || ||||||    
T  39700919 gtcctttaagttttaaaagtttcaattatgtcctttta 39700956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 29792661 - 29792551
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| || |||| ||||||||||||||||||||||  |||||||||| |||||||||| |||||||| ||||| |||||||||||||| | |||||| |    
T  29792661 aaataccatttttagtccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtttgacataattctca 29792562  T
Q  289 agttagtcttt 299  Q
    |||| ||||||    
T  29792561 agtttgtcttt 29792551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 319
Target Start/End: Complemental strand, 36360233 - 36360088
Alignment:
Q  174 aatatataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagt 273  Q
    ||||||| |||||  ||||| || |||| ||| ||||||||||||||||||| ||| |||||||||||| |||| |||||||||| || ||| ||||| |    
T  36360233 aatatattataggccaaataccaattttggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttttaat 36360134  T
Q  274 ttgagagaattctaaagttagtcttttaagttttaaaagtttcaaa 319  Q
    |||| | ||||   ||||||||| ||||||||| ||||||||||||    
T  36360133 ttgacaaaattgccaagttagtcctttaagtttcaaaagtttcaaa 36360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 41190397 - 41190292
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtt 305  Q
    ||||||||||||||||||| ||||||||||  |||||||||| ||| ||||||||||||| ||||||||||| |||||||| ||  ||||| ||||||||    
T  41190397 cttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtttgatagaattctcaatctagtcatttaagtt 41190298  T
Q  306 ttaaaa 311  Q
    | ||||    
T  41190297 tcaaaa 41190292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 9770556 - 9770667
Alignment:
Q  195 cacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttag 294  Q
    |||||||  ||||| ||| |||||||||||  ||| ||| || ||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  9770556 cacttttgctccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaattctcaagttag 9770655  T
Q  295 tcttttaagttt 306  Q
    || |||||||||    
T  9770656 tcatttaagttt 9770667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 373 - 480
Target Start/End: Original strand, 14871088 - 14871195
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||| ||||| ||||| ||| ||||||||||||||||||||| ||||  |   ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  14871088 ttaagtgatgctgatgcagctgttaagttgttgacttggatcaaaacgttggattttaaaagcttcagggtgtcaaaacgttacgtttaatggtcacaaa 14871187  T
Q  473 tgttcatt 480  Q
    || |||||    
T  14871188 tgatcatt 14871195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 279 - 495
Target Start/End: Original strand, 34686490 - 34686708
Alignment:
Q  279 agaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaa 376  Q
    ||||||| ||| ||| || |||||||||||||||||| |||||| |  ||||| |||||| | |||  |||  || || ||  ||||||||| |||||||    
T  34686490 agaattccaaaattaatcatttaagttttaaaagttttaaatagatctttttagttgatagactatttcactattgccactgatgtcagtcttcgtttaa 34686589  T
Q  377 ctgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgtt 476  Q
    |||||| ||||||||||||||||||| ||||||| ||| ||||| | | ||| ||| |||| |||  ||||||| |   ||||||||| ||||||||| |    
T  34686590 ctgatgatgatgtagccgttaagttggtgacttgaatcaaaacaatgcgtttcaaaggctctaggtagtcaaaatgtcgcgtttaatgctcacaaatgat 34686689  T
Q  477 catttatagtgctagaaag 495  Q
    |||||| || |||||||||    
T  34686690 catttacagagctagaaag 34686708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 189 - 324
Target Start/End: Original strand, 43422847 - 43422982
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| |||||||  | |||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||| |||   | |||||  |    
T  43422847 aaataccacttttgattcttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttattttagcaaaattccca 43422946  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggt 324  Q
    |||||||| ||||||||| |||||||||||||||||    
T  43422947 agttagtcctttaagtttcaaaagtttcaaataggt 43422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 188 - 319
Target Start/End: Complemental strand, 45018063 - 45017934
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    |||||| ||||||| ||||||||||||||||| ||| ||||| |||||| ||||| |||| ||||||| ||||||||||||||||||||| | | |||      
T  45018063 taaataccacttttagtccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtttgaca-agttc-c 45017966  T
Q  288 aagttagtcttttaagttttaaaagtttcaaa 319  Q
    ||||||||| ||||||||| |||| |||||||    
T  45017965 aagttagtcctttaagtttcaaaaatttcaaa 45017934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 198 - 331
Target Start/End: Complemental strand, 40553433 - 40553300
Alignment:
Q  198 ttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtct 297  Q
    |||| ||||||||||||||||| ||||   || |||||| ||| | ||| |||||||||||| ||||||||||||||||| | ||||   ||||||||||    
T  40553433 ttttggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtttgacaaaatttctaagttagtct 40553334  T
Q  298 tttaagttttaaaagtttcaaataggttctttta 331  Q
    ||||||||| ||||||||||| | ||| ||||||    
T  40553333 tttaagtttcaaaagtttcaatttggtcctttta 40553300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 214 - 322
Target Start/End: Original strand, 14870954 - 14871061
Alignment:
Q  214 ttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagt 313  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||| ||  |||| ||| ||||| |||||||  ||||||||| ||||| ||||||||||    
T  14870954 ttgacagaattttcaagttagtcttt-aaatttcaaaagattcaaataaatcctcttaatttgacagaattcataagttagtcctttaaattttaaaagt 14871052  T
Q  314 ttcaaatag 322  Q
    |||||||||    
T  14871053 ttcaaatag 14871061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 196 - 340
Target Start/End: Original strand, 45017743 - 45017887
Alignment:
Q  196 acttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagt 295  Q
    |||||| ||||||||||||||| ||||||  ||| |||||| ||||| |||| ||||||||||||| ||| ||||||||| | |||||||  || |||||    
T  45017743 acttttggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtttaacagaattcccaaattagt 45017842  T
Q  296 cttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    | |||||| || |||| ||||||||| ||  ||||| ||||||||    
T  45017843 cctttaagattcaaaaatttcaaataagtcattttaattgataaa 45017887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 373 - 480
Target Start/End: Complemental strand, 16197493 - 16197386
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    ||||||||||||| |||||  |||||||||||||||| |||| ||||  | | ||||||||| | || |||||||||||| |||||||||||||||||||    
T  16197493 ttaactgatgttggtgtagttgttaagttgttgacttagatcaaaacgttgccttttaaaagtttcaaggtgtcaaaacgttacgtttaatggtcacaaa 16197394  T
Q  473 tgttcatt 480  Q
    || |||||    
T  16197393 tgatcatt 16197386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 34686987 - 34686896
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||| ||||||||||| | ||||||||| |||||||||||| |||| |||||| ||||||||| |||||||| || |||||||||||||||    
T  34686987 taggtcaaatatcacttatggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagtt 34686896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 43423250 - 43423101
Alignment:
Q  174 aatatataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagt 273  Q
    |||||||| ||||| ||||   |||||| ||||||||||||||||| ||||   || |||||  ||||| |||| ||||||||||||| ||| |||||||    
T  43423250 aatatatagtaggtcaaatgctacttttggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaattaagtc-ttttagt 43423152  T
Q  274 ttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggt 324  Q
    || | |||||||| || ||| || ||||||||| |||||||||||||||||    
T  43423151 ttcatagaattctcaatttactcctttaagtttcaaaagtttcaaataggt 43423101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 474
Target Start/End: Original strand, 23179160 - 23179239
Alignment:
Q  395 ttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatg 474  Q
    |||||||||||||||||||| ||| |||   ||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  23179160 ttaagttgttgacttggatcaaaatactgtcttttaaaagcttcagagtgtcaaaacgctacgtttaatgatcacaaatg 23179239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 203 - 274
Target Start/End: Original strand, 23553418 - 23553489
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||||||| |||| |||| || ||||||||||||||||||||||||| |||||| ||||||||    
T  23553418 gtccttttagtttgacaaaattctcaagttggtcttttaaatttcaaaagtttcaaataggtcattttagtt 23553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 5358647 - 5358717
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||||||||||||||||||||| |||||| || || |||||||||||| || |||||||||||||||    
T  5358647 tccttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagtt 5358717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 11113555 - 11113657
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||||||| ||||   || |||||| |||||||||  ||||||||||| ||||||||||||||||| ||||||   ||||||||| ||||||    
T  11113555 tccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatttccaagttagtcctttaag 11113654  T
Q  304 ttt 306  Q
    |||    
T  11113655 ttt 11113657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 207 - 340
Target Start/End: Complemental strand, 16208815 - 16208682
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    |||||||||||||||||| |||| |||||  ||||| ||| | |  |||||| ||| || ||||||||| | |||||| | ||||||||| ||| |||||    
T  16208815 ttttagtttgacagaattctcaagttagttctttaagttttatagatttcaaatagatcattttagttttatagaattttcaagttagtcctttgagttt 16208716  T
Q  307 taaaagtttcaaataggttcttttatttgataaa 340  Q
     |||||||||||||| || |||||| ||||||||    
T  16208715 caaaagtttcaaatatgtccttttagttgataaa 16208682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 44040808 - 44040896
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||| |||||||| |||| ||||||||||||| ||||||||| |||||||| ||||||| |||||||||||| || |||||| ||||||||    
T  44040808 aggtcaaatatca-ttttggtccttttagtttaacagaatttacaaattag-cttttaagtttcaaaagttttaaataggtcattttagtt 44040896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 9770662 - 9770731
Alignment:
Q  250 aagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaa 319  Q
    ||||||||| |||||||||||||||||| |||||||  ||||||||| ||||||||| |||| |||||||    
T  9770662 aagtttcaaataggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaaaatttcaaa 9770731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 13771425 - 13771492
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||||||||||||| |||||| ||||| ||| ||||||||||| ||| | |||||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagtt 13771492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 9277052 - 9276983
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||||||||| ||||||| ||| |||||| ||||| ||||||||||||||| ||||| |||||||||    
T  9277052 tccttttagtttgatagaatttccaagttagtcctttaagtttcaaaagtttcaaataggt-cttttagtt 9276983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 262 - 473
Target Start/End: Original strand, 44040825 - 44041037
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctac 359  Q
    |||||||||||||| | ||||||   || |||| ||||||||||| |||||||| ||||||||  ||||| |||||||| |||  ||| |||| |||| |    
T  44040825 ggtccttttagtttaacagaatttacaaattag-cttttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttatccctgc 44040923  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    ||| |||      |||||||||| ||||||| |  ||| |||||||| ||| ||| ||||  | | |||||||||||||| |||||||||| | ||| ||    
T  44040924 tgttagttaataattaactgatgatgatgtaacttttaggttgttgagttgtatcaaaacgttgccttttaaaagctccaaggtgtcaaaatgttacatt 44041023  T
Q  460 taatggtcacaaat 473  Q
    ||||||| ||||||    
T  44041024 taatggtgacaaat 44041037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 25737106 - 25737175
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||| | |||| | ||||||||| ||||||||| ||||||||||||||| | ||||||    
T  25737106 ggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatcctttta 25737175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 43423159 - 43423070
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagt 295  Q
    |||||||||| | |||||| |||| ||| || ||||| ||||||||||||||| |||||| ||||||||||| | |||||  ||||||||    
T  43423159 cttttagtttcatagaattctcaatttactcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaattcccaagttagt 43423070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 43422864 - 43422932
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttattt 334  Q
    |||||||||||| | |||||| || |||||| |||||||||| |||||||||| ||||| |||||||||    
T  43422864 cttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttattt 43422932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 484
Target Start/End: Original strand, 12684817 - 12684875
Alignment:
Q  426 ttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttata 484  Q
    ||||||||||||||||||||||| ||||| | ||||||||||| ||||  |||||||||    
T  12684817 ttttaaaagctccagggtgtcaagacgctgcatttaatggtcataaattatcatttata 12684875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 29030271 - 29030175
Alignment:
Q  179 ataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagttt 275  Q
    |||| |||| ||||| ||||||| ||| ||||||||||||| ||||    | ||| || ||||| |||| ||||||||||||| |||||||||||||    
T  29030271 ataaaaggtcaaataccacttttggtcattttagtttgacataattccttagttattcctttaagtttcgaaagtttcaattaagtccttttagttt 29030175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 11113614 - 11113661
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    ||||||||||||||||||||||| ||| |||||| ||||| |||||||    
T  11113614 gtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 11113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 36360205 - 36360146
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaata 321  Q
    |||| ||||||||||| ||||||   |||||||||||||||||||  |||||||||||||    
T  36360205 ggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaata 36360146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 43422949 - 43423020
Alignment:
Q  231 ttagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||||||| | ||||   ||||||||| |||||    
T  43422949 ttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttagtcctttaa 43423020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 13771950 - 13771868
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtcctttta 271  Q
    ||||| || |||| ||| ||||||||||||| ||||  ||| |||||| ||||| ||||||||||||||| || ||| |||||    
T  13771950 aaataccatttttggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcatttta 13771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 274
Target Start/End: Original strand, 35433894 - 35433971
Alignment:
Q  197 cttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||| ||||||||| ||||| ||||||  ||| |||||| ||||| |||||||||||| || ||| || ||||||||    
T  35433894 cttttggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagtt 35433971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 36314777 - 36314708
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||| | |||| | ||||||||||||||| |||  |||||||||| || || ||||||    
T  36314777 ggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtcctttta 36314708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 11113550 - 11113622
Alignment:
Q  259 ttaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||| |||||||||||||| | |||||  ||||||||| ||||| |||| ||||||||||  |||| ||||||    
T  11113550 ttagatccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtcctttta 11113622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 23179049 - 23179093
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    |||||||||||||||| |||||||  ||||||||| |||||||||    
T  23179049 ggtccttttagtttgacagaattcccaagttagtcctttaagttt 23179093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 35434404 - 35434328
Alignment:
Q  198 ttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||| ||||||||||||||||| ||||   || ||| || ||||| ||||||||||||||| || ||| ||||||||    
T  35434404 ttttggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagtt 35434328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 142; Significance: 3e-74; HSPs: 4)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 183 - 501
Target Start/End: Original strand, 9378 - 9688
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    ||||| |||||||| ||||||||||||||||||||||||||| | || |||||| ||||| ||||  |||||||||||||||||||||||||| | ||||    
T  9378 taggtcaaatatcatttttcgtccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaatagaa 9477  T
Q  283 ttctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactga 380  Q
    |||| ||||||||  |||||||||         ||||||||| |||||| |||||||| |||  ||| ||||||||| || ||||||||||||||||| |    
T  9478 ttctcaagttagttctttaagttt---------caaataggtccttttagttgataaactatttcactgttacccctgctatcagtctccgtttaactaa 9568  T
Q  381 tgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    |||||||||||  |||||||||||||||| |||| ||| | | | |||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  9569 tgttgatgtagttgttaagttgttgactttgatcaaaatattgccttttaaaagctcgagggtgtcaaaacgctacgtttaatggtcacaaatgatcatt 9668  T
Q  481 tatagtgctagaaagacaact 501  Q
    ||||||| | |||||||||||    
T  9669 tatagtg-ttgaaagacaact 9688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 10007 - 9891
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||| |||||||||||||||||||||||||| |||| |||||  ||||| |||| |||||||||||||| |||||||||||||| | |||||  |    
T  10007 aaatatcacgtttcgtccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattccca 9908  T
Q  289 agttagtcttttaagtt 305  Q
    |||||||| ||| ||||    
T  9907 agttagtccttttagtt 9891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 384 - 480
Target Start/End: Complemental strand, 9839 - 9743
Alignment:
Q  384 tgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    |||||||| |||||  ||||||||||||||| |||| ||   ||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||    
T  9839 tgatgtagtcgttacattgttgacttggatcaaaacgctgtcttttaaaagctccagggtgtcaaaacgttacatttaatcgtcacaaatgatcatt 9743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 9993 - 9925
Alignment:
Q  263 gtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    ||||||||||||||| |||||||| ||||||||  |||||||||  |||||||||| ||| | ||||||    
T  9993 gtccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttcctttta 9925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 4e-73; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 189 - 493
Target Start/End: Original strand, 21376556 - 21376862
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||||| |||| ||||||||| |||||| ||| ||| || |||| ||||||||||| |||||||| ||||| || |||||||||||| |||||| | |    
T  21376556 aaatatcatttttagtccttttaatttgactgaacttttaagttagacttttaaattttaaaagttttaattaagttcttttagtttgatagaattttca 21376655  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
     ||| ||| ||||||||| |||||||| ||||| ||  ||||| |||||||| |||  |||||||||| || ||||||||||||||||||||||||||||    
T  21376656 ggttggtcctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttaccactgctgtcagtctccgtttaactgatgttga 21376755  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    |||||||||||||||||||||||| ||  |||   |   |||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||    
T  21376756 tgtagccgttaagttgttgacttgaattaaaatgttgtcttttaaaagctcgatggtgtcaaaacgctacgtttaatggtcacaaatgatcatttatagt 21376855  T
Q  487 gctagaa 493  Q
    |||||||    
T  21376856 gctagaa 21376862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 189 - 495
Target Start/End: Complemental strand, 31247778 - 31247470
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||||||| ||||||||| ||||||||||||| ||| |||||| ||||| |||| |||||||||||||||||||||||||| || |||||||  |    
T  31247778 aaatatcacttttggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttggacagaattccca 31247679  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||  ||||||||| |||||||||||||| ||  ||||| |||||||||||  ||||  ||||||||  ||||||||||||||||||||||| |||    
T  31247678 agttagtgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactattacccctgttgtcagtctccgtttaactgatgctga 31247579  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    | |||  |||||||||||||||| |||| |||  || | ||||||||||| || | ||| ||||| ||||||||||| |||||||||| ||| |||||||    
T  31247578 tatagttgttaagttgttgactttgatcaaaatgctgccttttaaaagcttcaagatgttaaaacactacgtttaattgtcacaaatgatcaattatagt 31247479  T
Q  487 gctagaaag 495  Q
    |||||||||    
T  31247478 gctagaaag 31247470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 189 - 498
Target Start/End: Original strand, 4276125 - 4276437
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||| |||||| |||||||||||||||||  ||||| || |||||  ||||| |||  ||||||||||||| ||| ||||||||||| | |||| | |    
T  4276125 aaatattacttttggtccttttagtttgacaatatttttaagttagttctttaagttttgaaagtttcaattaagtctttttagtttgacataattttta 4276224  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
     ||||||  ||||||||| ||||||||||||||| |  ||||| |||||||| ||  |||| ||||||||| |||||||| ||| |||||||||||||||    
T  4276225 tgttagttctttaagtttcaaaagtttcaaatagttcattttagttgataaactatttcactgttacccctgctgtcagtatccatttaactgatgttga 4276324  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtc-aaaacgctacgtttaatggtcacaaatgttcatttatag 485  Q
    |||||| ||||||||||||| || |||| |||   | | |||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||    
T  4276325 tgtagcggttaagttgttgatttagatcaaaatggtgccttttaaaagctcgagggtgtcaaaaacgctacgtttaatggtcacaaataatcatttatag 4276424  T
Q  486 tgctagaaagaca 498  Q
    |||||||||||||    
T  4276425 tgctagaaagaca 4276437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 361 - 493
Target Start/End: Complemental strand, 35555943 - 35555811
Alignment:
Q  361 gtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgttt 460  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||  || | |||||||||||| ||||||||||||||||||||||    
T  35555943 gtcagtctccgtttaaccgatgctgatgtagccgttaagttgttgacttggatcaaaatgcttcattttaaaagctcaagggtgtcaaaacgctacgttt 35555844  T
Q  461 aatggtcacaaatgttcatttatagtgctagaa 493  Q
    |||| ||||||||  ||||||||||||||||||    
T  35555843 aatgatcacaaattatcatttatagtgctagaa 35555811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 360 - 493
Target Start/End: Complemental strand, 14629630 - 14629497
Alignment:
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||  || | |||||||||||| ||||||||||||  ||| |||    
T  14629630 tgtcagtctccatttaactgatgttgatgtagccgttaagttattgacttggatcaaaatgctgccttttaaaagctcgagggtgtcaaaaaactatgtt 14629531  T
Q  460 taatggtcacaaatgttcatttatagtgctagaa 493  Q
    ||||||||||||||| ||||||||||||||||||    
T  14629530 taatggtcacaaatgatcatttatagtgctagaa 14629497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 184 - 474
Target Start/End: Original strand, 35555511 - 35555806
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattag-tcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    |||||||||||||| ||| |||||||||  |||||||||||  ||| |||| |||||||| ||||||||||||||||||  || ||||||||||| ||||    
T  35555511 aggttaaatatcacgtttggtccttttaaattgacagaattcacaagttagatcttttaagtttcaaaagtttcaattaaatcattttagtttgacagaa 35555610  T
Q  283 ttctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactga 380  Q
    || | |||||||||  |||| |||| |||||||||||||  |  ||||| |||||||| ||  ||||||||| |||| || |||||      |||||| |    
T  35555611 ttatcaagttagtccattaaattttgaaagtttcaaataaatcattttagttgataaactatttcaccgttatccctgctatcagttaataattaactaa 35555710  T
Q  381 tgttgatgtagccgttaagttgttgacttggatccaaacactac--tttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatg 474  Q
    ||||||| |||||||||||||| |||||| |||| |||| || |   |||||||| ||||||||||| |||||| |||||||||| ||||||||||    
T  35555711 tgttgatatagccgttaagttgctgacttagatcaaaacgcttcctcttttaaaaactccagggtgttaaaacgttacgtttaatagtcacaaatg 35555806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 344 - 501
Target Start/End: Original strand, 53783022 - 53783179
Alignment:
Q  344 tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggt 443  Q
    ||||||||||| || || |||||||| || |||| |||||||||| || |||||||||||||| ||||||| |||  || | |||||||||  | |||||    
T  53783022 tcaccgttacctctgctatcagtctctgtgtaacagatgttgatgaagtcgttaagttgttgatttggatcaaaatgctgcattttaaaagaccgagggt 53783121  T
Q  444 gtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  53783122 gtcaaaacgctacgtttaatggtcacaaatgatcatttatagtgctagaaagacaact 53783179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 188 - 410
Target Start/End: Complemental strand, 3088228 - 3088013
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    ||||||| | |||| ||||||||||||||||||||||||||| ||| |  |||||||||| ||||||||||||| ||||||||||||||| |  |||       
T  3088228 taaatattatttttggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtttgacatgatttcc 3088129  T
Q  288 aagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttg 385  Q
     |||||||| |||||||||         ||||||||| |||||| |||||||| |||  |||||||| ||||||||| ||||| ||||||||||||  ||    
T  3088128 tagttagtcctttaagttt---------caaataggtccttttaattgataaactatttcaccgttatccctactgttagtctgcgtttaactgatcctg 3088038  T
Q  386 atgtagccgttaagttgttgacttg 410  Q
    ||||||||||||||||||| |||||    
T  3088037 atgtagccgttaagttgttaacttg 3088013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 50530228 - 50530333
Alignment:
Q  181 aataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagag 280  Q
    ||||||| |||||||| ||||  |||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||| ||||||||||| ||    
T  50530228 aataggtcaaatatcatttttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtttgacag 50530327  T
Q  281 aattct 286  Q
    ||||||    
T  50530328 aattct 50530333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 480
Target Start/End: Original strand, 31247192 - 31247409
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattatc--accgttacccctactg 361  Q
    |||||||||||||| | |||||| |||||||||||| |||||| |||||||||||||| || || ||| |||||||| |||   || ||||| ||| |||    
T  31247192 tccttttagtttgacaaaattctcaagttagtcttt-aagtttcaaaagtttcaaataagtcctattagttgataaactattttactgttactcctgctg 31247290  T
Q  362 tcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgttta 461  Q
    |||||      |||| ||||| ||||||||||||||||||||||||||||||| ||||  |   ||||||||| |||| ||||||||||   ||||||||    
T  31247291 tcagttattaattaattgatgctgatgtagccgttaagttgttgacttggatcaaaacgttgtcttttaaaagttccatggtgtcaaaatattacgttta 31247390  T
Q  462 atggtcacaaatgttcatt 480  Q
    ||||| ||||||| |||||    
T  31247391 atggttacaaatgatcatt 31247409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 402
Target Start/End: Complemental strand, 33975109 - 33975015
Alignment:
Q  310 aagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttg 402  Q
    |||||||||||||||||||||| ||||||||||||  |||| ||| ||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  33975109 aagtttcaaataggttcttttagttgataaattatttcaccattatccctattgtcagtctccatttaactgatgttgatgtggccgttaagttg 33975015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 373 - 480
Target Start/End: Complemental strand, 53783341 - 53783234
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    ||||||||||||||||||| |||||||||||||| || |||| ||||||| | |||||||||||||| ||||||||||   |||||||||| ||||||||    
T  53783341 ttaactgatgttgatgtagtcgttaagttgttgatttagatcaaaacactgcattttaaaagctccaaggtgtcaaaatattacgtttaatagtcacaaa 53783242  T
Q  473 tgttcatt 480  Q
    || |||||    
T  53783241 tgatcatt 53783234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 298 - 495
Target Start/End: Complemental strand, 21410332 - 21410134
Alignment:
Q  298 tttaagttttaaaagtttcaaat-aggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccg 394  Q
    ||||||||| |||||||| |||| | ||  ||||| |||||||| |||  ||| |||||| ||| ||||||| ||||| ||||||||| ||| || | ||    
T  21410332 tttaagtttcaaaagttttaaattatgtcattttagttgataaactatttcactgttacctctattgtcagtttccgtgtaactgatgctgaagtggtcg 21410233  T
Q  395 ttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaa 494  Q
    |||||||||||  ||||||| ||||  ||  ||| ||| ||| ||||||||||||||||| ||||||||||||||||||| ||| |||||| ||||||||    
T  21410232 ttaagttgttg--ttggatcaaaacgatatgtttcaaaggcttcagggtgtcaaaacgctgcgtttaatggtcacaaatgatcagttatagggctagaaa 21410135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 310 - 463
Target Start/End: Original strand, 14629327 - 14629481
Alignment:
Q  310 aagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgac 407  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||||  |||||||      |||||| ||| | |||||||||||||||||||||     
T  14629327 aagtttcaaataggttcttttagttgataaattatttcaccgttacccctgttgtcagttaataattaactaatgct-atgtagccgttaagttgttgat 14629425  T
Q  408 ttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaat 463  Q
    ||| ||| |||| || | |||||||||||| |||||||||||| | ||||||||||    
T  14629426 ttgaatcaaaacgctgccttttaaaagctctagggtgtcaaaatgttacgtttaat 14629481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 189 - 480
Target Start/End: Complemental strand, 21377133 - 21376861
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||| ||| ||||||||||||||||||||||| ||| ||| |  |||||||||| ||||||||||||||||| ||||||||||| | |||||       
T  21377133 aaataacacgtttggtccttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagtttgacataattc--- 21377037  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
           ||||          ||||||||||||||| |||||| || ||||| ||  |||||||||||||||||||||||      |||||||| |||||    
T  21377036 -------cttt----------aagtttcaaataggtccttttagtttataaactatttcaccgttacccctactgtcagttaataattaactgaggttga 21376954  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    |||| || ||||||||||| |||||||| ||||  |   |||||||||||| |||||| ||||||| || ||||||| |||||||||| |||||    
T  21376953 tgtatcc-ttaagttgttgtcttggatcaaaacgttgtcttttaaaagctctagggtgccaaaacgatatgtttaatcgtcacaaatgatcatt 21376861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 486
Target Start/End: Original strand, 24707471 - 24707696
Alignment:
Q  263 gtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctact 360  Q
    ||||||||||||| | ||||||   ||||||||| |||||||||| ||||||| |||||  |  ||||| |||||||| |||  |||| ||| || | ||    
T  24707471 gtccttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagttgataaactatttcaccattaaccttgct 24707570  T
Q  361 gtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgttt 460  Q
    | ||||      |||| ||||||||||||||||||||| ||||||| || |||| |||   | | ||| |||||||| |||||||||||||||||| |||    
T  24707571 ggcagttaataattaattgatgttgatgtagccgttaaattgttgatttagatcaaaatgttgcctttaaaaagctcgagggtgtcaaaacgctacattt 24707670  T
Q  461 aatggtcacaaatgttcatttatagt 486  Q
    |||||||||||||  |||||||||||    
T  24707671 aatggtcacaaataatcatttatagt 24707696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 373 - 474
Target Start/End: Original strand, 3087215 - 3087316
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||| ||||| |||||||||| |||||||||||||||||||| |||| || | |||||||| ||| | |||||||||||| ||||||||||||||| |||    
T  3087215 ttaattgatgctgatgtagcctttaagttgttgacttggatcaaaacgctgcattttaaaatctcaaaggtgtcaaaacgttacgtttaatggtcataaa 3087314  T
Q  473 tg 474  Q
    ||    
T  3087315 tg 3087316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 266 - 402
Target Start/End: Original strand, 19153884 - 19154023
Alignment:
Q  266 cttttagtttgagagaattc-taaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgt 362  Q
    |||||||||||| ||||||  | ||||||||  ||||||||| ||| |||||||||| ||  ||||| ||||||||||||  ||| ||||| ||||||||    
T  19153884 cttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaatatgtctttttagttgataaattatttcactgttactcctactgt 19153983  T
Q  363 cagtctccgtttaactgatgttgatgtagccgttaagttg 402  Q
    ||||||| |||||||| |||| ||||| || |||||||||    
T  19153984 cagtctcagtttaactaatgtagatgtggcggttaagttg 19154023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 189 - 302
Target Start/End: Original strand, 3087072 - 3087184
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||| ||| ||||||||| ||||| ||||||||||| ||||||||| || |||||||||||| || ||  |||||||||||||| |||||||| |    
T  3087072 aaataacacatttagtccttttaatttgatagaattttcaagttagtcttt-aagtttcaaaagttttaaataaatccttttagtttgacagaattctca 3087170  T
Q  289 agttagtcttttaa 302  Q
    ||| | ||||||||    
T  3087171 agtaaatcttttaa 3087184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 54456912 - 54456799
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtt 305  Q
    |||||||||||| |||| || ||||||| ||  |||| | ||||||||||||| |||||||||||| ||||| | ||||   ||||||||| ||||||||    
T  54456912 cttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatttgacataatttccaagttagtcctttaagtt 54456813  T
Q  306 ttaaaagtttcaaa 319  Q
    | ||||||||||||    
T  54456812 tcaaaagtttcaaa 54456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 54456995 - 54456847
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    |||| |||||||||||||| ||||||||||||| | |||||| |||| |||| | ||||| |||  |||| ||||||||| | |||||||||||| ||||    
T  54456995 taggctaaatatcacttttggtccttttagtttaatagaattctcaagttagccctttaagtttagaaagcttcaattagattcttttagtttgatagaa 54456896  T
Q  283 -ttctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
     ||| ||| ||| ||  |||||| | ||||||||||||||||| ||||||    
T  54456895 cttccaaa-ttattcccttaagtatcaaaagtttcaaataggtcctttta 54456847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 54456656 - 54456746
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||| |||||||| ||||  ||||||||||||||||||||||  ||||||||| ||||| |||| |||||||||| || ||| ||||||||    
T  54456656 aggtcaaatatcatttttgatccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagtt 54456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 14964737 - 14964784
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  14964737 gtccttttagtttgacagaattttcaagttagtcttttaagtttcaaa 14964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 495
Target Start/End: Complemental strand, 3087427 - 3087383
Alignment:
Q  451 cgctacgtttaatggtcacaaatgttcatttatagtgctagaaag 495  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  3087427 cgctacgtttaatggttacaaatgatcatttatagtgctagaaag 3087383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 24707456 - 24707523
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagttt 255  Q
    |||||||||||||| ||||||||||||| ||||||||| ||| |||||| ||||| |||  |||||||    
T  24707456 taaatatcactttttgtccttttagttttacagaatttccaagttagtcctttaagttttcaaagttt 24707523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 31247192 - 31247261
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||||||||||| |||| |||| |||||| ||||| ||||||||||||||| || ||||| ||||||    
T  31247192 tccttttagtttgacaaaattctcaagttagtc-tttaagtttcaaaagtttcaaataagtcctattagtt 31247261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 4276689 - 4276633
Alignment:
Q  250 aagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||||||||||| || ||||||||||| |||||||  ||||||||| |||||||||    
T  4276689 aagtttcaattagatcattttagtttgacagaattcccaagttagtcctttaagttt 4276633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 5505800 - 5505728
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtc-ttttaaatttcaaaagtttcaattaggtccttttagttt 275  Q
    ||||||| |||||||| |||||  ||||||||| |||||| |||||||||||| || ||| ||||||||||||    
T  5505800 tcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatccttttagttt 5505728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 5505820 - 5505732
Alignment:
Q  244 tttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagt-cttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||| |||||||||||||| ||||||| |||||| | ||||  ||| ||||| ||||||||||| |||||||| |||||| | ||||||    
T  5505820 tttcgaaagtttcaattagatcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatcctttta 5505732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 286
Target Start/End: Original strand, 14964635 - 14964729
Alignment:
Q  191 atatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattct 286  Q
    |||||||||||  |||||||||||| ||  ||||  ||| ||||||||| || |||  ||||||||||||| ||| ||||||||||| ||||||||    
T  14964635 atatcacttttgttccttttagtttaacttaattcccaagttagtcttt-aagttttgaaagtttcaattatgtctttttagtttgacagaattct 14964729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 14964737 - 14964780
Alignment:
Q  263 gtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||||||||||||| |||||| | |||||||||||||||||||    
T  14964737 gtccttttagtttgacagaattttcaagttagtcttttaagttt 14964780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 54456855 - 54456800
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa 258  Q
    ||||||||| ||||||| ||||| ||| |||||| ||||| |||||||||||||||    
T  54456855 gtccttttaatttgacataatttccaagttagtcctttaagtttcaaaagtttcaa 54456800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 19153884 - 19153953
Alignment:
Q  206 cttttagtttgacagaattt-tcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||||||||||||||| |||| |||||  ||||| ||||||| ||||||| || ||| ||||||||    
T  19153884 cttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaatatgtctttttagtt 19153953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 42017054 - 42017017
Alignment:
Q  238 tttaaatttcaaaagtttcaattaggtccttttagttt 275  Q
    |||||||||||||||||||||  |||||||||||||||    
T  42017054 tttaaatttcaaaagtttcaaacaggtccttttagttt 42017017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 50530251 - 50530300
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagt 313  Q
    |||||||||||||| |||||| | || |||||||||||||||| ||||||    
T  50530251 tccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagt 50530300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 3087146 - 3087190
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttca 248  Q
    ||||||||||||||||||||| |||| | | ||||||||||||||    
T  3087146 tccttttagtttgacagaattctcaagtaaatcttttaaatttca 3087190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 340
Target Start/End: Original strand, 54456676 - 54456752
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    |||||||||||||| ||||||   || |||||| |||||||||  ||||||||||||| ||  ||||| ||||||||    
T  54456676 tccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagttgataaa 54456752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 3e-71; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 189 - 501
Target Start/End: Complemental strand, 17180273 - 17179961
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| || |||| ||||||||||||| | | |||||| |||||| || ||||| |||| ||||||| ||||| ||||||||||||||| | |||| | |    
T  17180273 aaataccatttttggtccttttagttttatataatttttaaattaatcctttaagtttcgaaagttttaattatgtccttttagtttgacataattttca 17180174  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||| ||||||||||||||||||||||||| |  ||||| |||||||| |||  ||||||||||||| |||| |||||||||||||  ||||||||    
T  17180173 agttagtcctttaagttttaaaagtttcaaatagatcattttagttgataaactatttcaccgttacccctgctgttagtctccgtttaa--gatgttga 17180076  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    ||||| |||||||||||||||||| ||| |||  || | |||||||| ||| | ||||||||||| |||| |||||||||| |||||| |||||||||||    
T  17180075 tgtagtcgttaagttgttgacttgaatcaaaatgctgccttttaaaaactcgatggtgtcaaaacactacatttaatggtcccaaatgatcatttatagt 17179976  T
Q  487 gctagaaagacaact 501  Q
    |||||||||||||||    
T  17179975 gctagaaagacaact 17179961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 189 - 498
Target Start/End: Complemental strand, 24139641 - 24139332
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||||| ||||  ||||||||||| |||| ||||  |||||||||| ||||| |||| ||||||| ||||| ||||||||||||||| |||||| | |    
T  24139641 aaatatcaattttgatccttttagtt-gacataattcacaaattagtcctttaagtttcgaaagttttaattaagtccttttagtttgatagaattatca 24139543  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
     ||||||| ||||||||| |||| ||||||||| ||  ||||| ||||||||||||  ||| || ||||||  |||||||||||||||| |||||| |||    
T  24139542 ggttagtcctttaagtttcaaaaatttcaaataagtctttttagttgataaattatttcactgtaacccctgttgtcagtctccgtttatctgatgctga 24139443  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||||||| || ||||| |||||||||||||||||||||||| ||| | ||||||| |    
T  24139442 tgtagccattaagttgttgacttggatcaaaacactacattttaaaagcttca-ggtgttaaaacgctacgtttaatggtcacagatgattatttataat 24139344  T
Q  487 gctagaaagaca 498  Q
    ||||||||||||    
T  24139343 gctagaaagaca 24139332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 175 - 501
Target Start/End: Original strand, 11527512 - 11527831
Alignment:
Q  175 atatataataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||| ||||||||||| ||||||| ||||||||| ||||||| ||||   || |||||| ||||| |||| ||||||||||||||||||||||||||    
T  11527512 atatatattaggttaaataccacttttggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 11527611  T
Q  275 tgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgt 372  Q
    ||| | |||||  ||||||||| |||||||||         |||||||||  ||||| |||||||| |||  ||||||||||||| |||||||| |||||    
T  11527612 tgacaaaattcacaagttagtcctttaagttt---------caaataggtcattttagttgataaactatttcaccgttacccctgctgtcagtatccgt 11527702  T
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||| ||||| |||||||| |||||||||||||| ||||||| |||   ||| |||||||||||  ||| |||||||||||||| |||||||||||||||    
T  11527703 ttaattgatgctgatgtagtcgttaagttgttgagttggatcaaaatgttaccttttaaaagcttaaggctgtcaaaacgctacttttaatggtcacaaa 11527802  T
Q  473 tgttcatttatagtgctagaaagacaact 501  Q
    || | ||||||||||||| |||| |||||    
T  11527803 tgataatttatagtgctataaaggcaact 11527831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 181 - 489
Target Start/End: Original strand, 2839607 - 2839899
Alignment:
Q  181 aataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagag 280  Q
    |||||| |||||||||||||| ||||||||| ||||| |||||| |||| |||||| ||||| |||||||||||||||||||||||||||| ||||| ||    
T  2839607 aataggctaaatatcacttttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacag 2839706  T
Q  281 aattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaact 378  Q
    |||||| ||||||||| |||         || ||||||||||||| ||||| |||||||| ||  |||  ||||||||| || |||||||   |||||||    
T  2839707 aattctcaagttagtccttt---------aaatttcaaataggtttttttagttgataaactatttcattgttaccccttctatcagtctaattttaact 2839797  T
Q  379 gatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttca 478  Q
    |||| ||||||||||||||||||||||||||||||  |||  ||         ||||||||||||||||||||||||| ||||||||||||||||| |||    
T  2839798 gatgctgatgtagccgttaagttgttgacttggataaaaatgct---------aagctccagggtgtcaaaacgctacatttaatggtcacaaatgatca 2839888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 187 - 501
Target Start/End: Original strand, 10962726 - 10963042
Alignment:
Q  187 ttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaatt-c 285  Q
    ||||||||||||| |  || ||||||||||||| ||||   || ||| ||| | || |||| |||||||||||||| |||||||| ||| | |||||| |    
T  10962726 ttaaatatcacttatgatctttttagtttgacaaaattccaaagttattctgtaaagtttcgaaagtttcaattagatccttttattttaatagaatttc 10962825  T
Q  286 taaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattatc--accgttacccctactgtcagtctccgtttaactgatgt 383  Q
    |||| |||||| |||||||||||||||||||||||| ||  ||||| |||||||| |||   |||||||||| | ||||||||      ||||||||||     
T  10962826 taaa-ttagtcctttaagttttaaaagtttcaaatatgtcattttagttgataaactattttaccgttacccttgctgtcagttaataattaactgatgc 10962924  T
Q  384 tgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttat 483  Q
    ||||||||||||||||||||||||||||||| |||  ||  ||||||||||||  ||| |||||||||||||||||||||||||||||||| |||||| |    
T  10962925 tgatgtagccgttaagttgttgacttggatcaaaatgctgttttttaaaagctttaggatgtcaaaacgctacgtttaatggtcacaaatgatcatttgt 10963024  T
Q  484 agtgctagaaagacaact 501  Q
    ||||||||||||||||||    
T  10963025 agtgctagaaagacaact 10963042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 206 - 480
Target Start/End: Original strand, 17179631 - 17179906
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtt 305  Q
    |||||| ||||||||||||  |||  ||| ||||||| |||| ||| ||| |||||||||| |||||||||| |||||| | ||||||||| ||||| ||    
T  17179631 cttttattttgacagaattcacaaggtagccttttaagtttcgaaaattttaattaggtccctttagtttgatagaattttcaagttagtcctttaaatt 17179730  T
Q  306 ttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgt 403  Q
    | |||| |||||||||||| |||||| ||||||| | ||  ||||||||| ||| ||||||||      |||||||||| |||||||| |||||||||||    
T  17179731 tcaaaaatttcaaataggtccttttagttgataagtcatttcaccgttactcctgctgtcagttaataattaactgatgctgatgtagtcgttaagttgt 17179830  T
Q  404 tgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    |||||| |||| |||   ||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |||||    
T  17179831 tgacttagatc-aaatgttaccttttaaaagctccagggtgtcaaaacgttacgcttaatggtcacaaatgatcatt 17179906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 195 - 484
Target Start/End: Complemental strand, 28630745 - 28630463
Alignment:
Q  195 cacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttag 294  Q
    ||||||| ||||||||||||||||| ||||   || ||||| |||||| |||  ||||||||||||||  || |||||||||  |||||||  |||||||    
T  28630745 cacttttggtccttttagtttgacataattcctaagttagttttttaagttttgaaagtttcaattagacccatttagtttggtagaattcctaagttag 28630646  T
Q  295 tcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagc 392  Q
    |  |||||| ||         ||||||||| |||||| |||||||| |||  |||| ||||||||  ||||||| ||||||||||||||| ||||||||     
T  28630645 tactttaagctt---------caaataggtccttttagttgataaactatttcacctttacccctgttgtcagtatccgtttaactgatgctgatgtagt 28630555  T
Q  393 cgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttata 484  Q
    |||||||||||||||||||||| |||  || | ||||||||| | |||||||||||||||| | ||||||| |||||||||| |||||||||    
T  28630554 cgttaagttgttgacttggatcaaaatgctgccttttaaaagttacagggtgtcaaaacgccatgtttaatagtcacaaatgatcatttata 28630463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 203 - 414
Target Start/End: Complemental strand, 10862708 - 10862494
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtc-tttta 301  Q
    |||||||||||||||||||||| |||| |||||| ||||| |||  ||||||||||||| ||| ||||||||||| |||||||   |||||||| |||||    
T  10862708 gtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccagttagtcatttta 10862609  T
Q  302 agttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaag 399  Q
    | ||| ||||||||||||||||| |||||| |||||||| ||  |||||||||||||| ||||||||      |||||| ||| ||||||||||||||||    
T  10862608 aatttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctgctgtcagttaataattaactaatgctgatgtagccgttaag 10862509  T
Q  400 ttgttgacttggatc 414  Q
    ||||| |||||||||    
T  10862508 ttgtttacttggatc 10862494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 183 - 324
Target Start/End: Complemental strand, 16168831 - 16168690
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    ||||| ||||| |||||||  || ||||||||||||||||||| |||||||||| ||||| ||||  |||||||||||||||||||||||||||| ||||    
T  16168831 taggtcaaataccacttttgatctttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtttgacagaa 16168732  T
Q  283 ttctaaagttagtcttttaagttttaaaagtttcaaataggt 324  Q
    |||| |||||||||| ||| |||| |||||||||||||||||    
T  16168731 ttctcaagttagtctattacgtttcaaaagtttcaaataggt 16168690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 181 - 331
Target Start/End: Original strand, 32417451 - 32417601
Alignment:
Q  181 aataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagag 280  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||| |||| ||||||| ||||| ||| ||||||||||| |     
T  32417451 aataggttaaatatcatttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaa 32417550  T
Q  281 aattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||| | ||||||||| ||||||||| |||||||| ||||| || ||||||    
T  32417551 aattttcaagttagtcatttaagtttcaaaagttttaaatatgtcctttta 32417601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 181 - 331
Target Start/End: Original strand, 32423292 - 32423442
Alignment:
Q  181 aataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagag 280  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||| |||| ||||||| ||||| ||| ||||||||||| |     
T  32423292 aataggttaaatatcatttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaa 32423391  T
Q  281 aattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||| | ||||||||| ||||||||| |||||||| ||||| || ||||||    
T  32423392 aattttcaagttagtcatttaagtttcaaaagttttaaatatgtcctttta 32423442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 262 - 472
Target Start/End: Original strand, 9901962 - 9902174
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctac 359  Q
    |||||||||||||||  ||||||   ||||||||  ||| ||||| |||||||| ||||||||  ||||| |||||||| |||  || ||||||||||      
T  9901962 ggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagttgataaactatttcatcgttacccctgt 9902061  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    | ||| ||| ||||||||||||||||| |||||| |||||||||||||||||||| |||| || | ||||||||||| ||  |||| |||||| ||||||    
T  9902062 tatcaatcttcgtttaactgatgttgaggtagccattaagttgttgacttggatcaaaacgctgccttttaaaagcttcaaagtgttaaaacgttacgtt 9902161  T
Q  460 taatggtcacaaa 472  Q
    |||| ||||||||    
T  9902162 taatcgtcacaaa 9902174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 189 - 324
Target Start/End: Original strand, 20575402 - 20575537
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| |||| || ||||||||||||||| ||||||| ||| |||||| ||||| |||| ||||||| || |||||||||||||||||| ||||||   |    
T  20575402 aaataccactattggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtttgatagaatttcca 20575501  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggt 324  Q
    |||||||| |||||||||||||||||||||||||||    
T  20575502 agttagtcctttaagttttaaaagtttcaaataggt 20575537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 188 - 474
Target Start/End: Complemental strand, 2840187 - 2839908
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    |||||||||| ||| ||||||||||||| ||| |||| |||| |||||| ||||| ||||||||||||| | ||| |||||||||||| | ||||||||     
T  2840187 taaatatcacgtttggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtttaacagaattctc 2840088  T
Q  288 aagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttg 385  Q
    |||||| || |||         |||||||||||||||  ||||| |||||||| ||  |||||||||  |||  ||| |||      |||| |||| |||    
T  2840087 aagttaatcattt---------aagtttcaaataggtcattttagttgataaactatttcaccgttatacctgttgttagttaataattaattgatattg 2839997  T
Q  386 atgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatg 474  Q
    ||||||||||||||| ||||| ||||||| |||| ||  |||||||||||| |||||||| | |||| ||||||||||||| |||||||    
T  2839996 atgtagccgttaagtggttgatttggatcaaaacgctgttttttaaaagcttcagggtgttagaacgttacgtttaatggtaacaaatg 2839908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 203 - 473
Target Start/End: Complemental strand, 11528165 - 11527893
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||| |||||||| |||||||||| |||||| ||||| ||| ||||||||||| ||  | |||||||||||| | || ||  || ||| || |||||    
T  11528165 gtcctttaagtttgaccgaattttcaagttagtcctttaagtttaaaaagtttcaaatatattcttttagtttgacataagtcccaacttaatcctttaa 11528066  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
    |||| |||||||||||||| ||  ||||| |||||||| |||  ||| ||||| | | |||| |||      |||| ||||| ||||  | ||||| |||    
T  11528065 gtttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttactcatgctgttagttaataattaattgatgctgatacaaccgttcagt 11527966  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    |||||||||||||| |||||||   ||||||||| ||||||||||||||||| || |||||||||||||||||    
T  11527965 tgttgacttggatcaaaacactgtcttttaaaagttccagggtgtcaaaacgttatgtttaatggtcacaaat 11527893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 340
Target Start/End: Complemental strand, 32417847 - 32417696
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| |||||||  || ||||||||| ||||||||  ||| |||||  ||||| |||| ||||||||||||||||||||| ||||||| | ||||   |    
T  32417847 aaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttcta 32417748  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    |||||||| ||||||||| | ||||||||||||||| |||||| ||||||||    
T  32417747 agttagtcatttaagtttcagaagtttcaaataggtccttttagttgataaa 32417696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 340
Target Start/End: Complemental strand, 32423688 - 32423537
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| |||||||  || ||||||||| ||||||||  ||| |||||  ||||| |||| ||||||||||||||||||||| ||||||| | ||||   |    
T  32423688 aaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttcta 32423589  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    |||||||| ||||||||| | ||||||||||||||| |||||| ||||||||    
T  32423588 agttagtcatttaagtttcagaagtttcaaataggtccttttagttgataaa 32423537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 9902404 - 9902282
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaat 283  Q
    |||| |||||||| |||| || |||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||| ||||||||||||||| | |||    
T  9902404 aggtcaaatatcatttttggttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataat 9902305  T
Q  284 tctaaagttagtcttttaagttt 306  Q
    ||   |||||||  |||||||||    
T  9902304 tcccgagttagttctttaagttt 9902282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 16168751 - 16168648
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    |||||||||||||||||||||| |||| ||||||| |||  ||||||||||||||| |||||| |||||||||||  ||| ||  |||||||||||||||    
T  16168751 gtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtttgactgaaatcccaagttagtcttttaa 16168652  T
Q  303 gttt 306  Q
    ||||    
T  16168651 gttt 16168648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 16168455 - 16168572
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||||||| ||||||||||||||| |||||| |||  |||||| ||||| |||  ||||||||||||||||| ||||||||||| ||||||   |    
T  16168455 aaataccacttttggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtttgacagaatttcca 16168554  T
Q  289 agttagtcttttaagttt 306  Q
    |||||||| |||||||||    
T  16168555 agttagtcctttaagttt 16168572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 207 - 311
Target Start/End: Original strand, 32417537 - 32417641
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||||||||||| ||||||||| |||||| ||||| |||||||||||| || || ||||||||||||||| ||||||   || |||||| |||||||||    
T  32417537 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32417636  T
Q  307 taaaa 311  Q
     ||||    
T  32417637 caaaa 32417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 207 - 311
Target Start/End: Original strand, 32423378 - 32423482
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||||||||||| ||||||||| |||||| ||||| |||||||||||| || || ||||||||||||||| ||||||   || |||||| |||||||||    
T  32423378 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32423477  T
Q  307 taaaa 311  Q
     ||||    
T  32423478 caaaa 32423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 264 - 495
Target Start/End: Complemental strand, 10407802 - 10407568
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagtttt-aaaagtttcaaataggttcttttatttgataaattat--caccgttacccctact 360  Q
    |||||||||||| |  ||||||| ||||||||| || ||||||| |||||||||||||| ||  ||||| |||||||| |||  ||| |||||| ||  |    
T  10407802 tccttttagtttaacggaattctcaagttagtcattcaagtttttaaaagtttcaaatatgtcattttagttgataaactatttcactgttacctctttt 10407703  T
Q  361 gtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgttt 460  Q
     || ||||| ||||||| ||||  ||| |  || |||||||||||| ||||| | |||   | | |||||||  ||||||||||||||||||   |||||    
T  10407702 atctgtctctgtttaaccgatgccgatttgaccattaagttgttgaattggaacaaaatgttgcgttttaaagtctccagggtgtcaaaacgacgcgttt 10407603  T
Q  461 aatggtcacaaatgttcatttatagtgctagaaag 495  Q
    |||||||||||||| |||| ||||  |||||||||    
T  10407602 aatggtcacaaatgatcatctataaggctagaaag 10407568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 203 - 274
Target Start/End: Original strand, 17179688 - 17179759
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||| |||||||||| ||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||    
T  17179688 gtccctttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtccttttagtt 17179759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 320
Target Start/End: Complemental strand, 20575670 - 20575600
Alignment:
Q  250 aagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaat 320  Q
    ||||||||| |||||||||||||||||| |||||||  ||||||||| ||||||||| |||||||||||||    
T  20575670 aagtttcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 263 - 495
Target Start/End: Original strand, 10407313 - 10407543
Alignment:
Q  263 gtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctact 360  Q
    ||||||||||||||| | |||||  | |||| |  ||||||||| |||||||||||||| ||  ||||| |||||||||||  |||| |||||||||  |    
T  10407313 gtccttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactgttacccctgtt 10407412  T
Q  361 gtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgttt 460  Q
     ||||||||| ||||||||||||    || |  ||||||| | ||||||||||| ||||  | | ||| ||| |||| |||  |||| |||| | |||||    
T  10407413 atcagtctccatttaactgatgt---ggtgggtgttaagtcgctgacttggatcaaaacgatgc-tttcaaaggctcgaggtagtcagaacgttgcgttt 10407508  T
Q  461 aatggtcacaaatgttcatttatagtgctagaaag 495  Q
    ||||||||||||| ||||||||||| |||| ||||    
T  10407509 aatggtcacaaatattcatttatagggctaaaaag 10407543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 10862709 - 10862653
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaa 318  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||    
T  10862709 ggtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaa 10862653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 449
Target Start/End: Original strand, 17131619 - 17131773
Alignment:
Q  297 ttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttaccc-ctactgtcagtctccgtttaactgatgttgatgtagcc 393  Q
    |||||||||| |||||||| ||||| ||  ||||| ||||||||||||  ||| ||||||| ||  |||||||     ||||| ||||||||||||| ||    
T  17131619 ttttaagtttcaaaagttttaaatatgtcattttagttgataaattatttcactgttaccctctgttgtcagttattatttaattgatgttgatgtaacc 17131718  T
Q  394 gttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaa 449  Q
    ||||| |||||||||||||| |||||  | | ||||||||| ||||||||||||||    
T  17131719 gttaaattgttgacttggat-caaacgttgcattttaaaagttccagggtgtcaaa 17131773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 298
Target Start/End: Complemental strand, 20575763 - 20575672
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtctt 298  Q
    ||||||||||||||||||| |||| ||||| |||||| |||| ||||||| || || ||||||||||||||| | |||||  |||||||||||    
T  20575763 cttttagtttgacagaattctcaagttagt-ttttaagtttcgaaagttttaaataagtccttttagtttgacaaaattcccaagttagtctt 20575672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 454
Target Start/End: Complemental strand, 9946818 - 9946582
Alignment:
Q  210 tagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaa 309  Q
    |||||||||| |||||  || |||||| ||||||| || ||||||||||||||||| ||||||||||| | ||||   || |||||| |||             
T  9946818 tagtttgacataatttctaagttagtcctttaaatctcgaaagtttcaattaggtcattttagtttgacataatttccaaattagtccttt--------- 9946728  T
Q  310 aagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgac 407  Q
    || ||||||| |||| |||||| |||||||| ||  |||||||||||||| ||||| || |    |||| ||||  |||| |||||||||||||||| ||    
T  9946727 aaatttcaaagaggtccttttagttgataaactatttcaccgttacccctgctgtcggt-taatattaattgattctgatatagccgttaagttgttaac 9946629  T
Q  408 ttggatccaaacactactttttaaaagctccagggtgtcaaaacgct 454  Q
    |||||||  ||   | | ||||||||||| |||||||||||||||||    
T  9946628 ttggatcagaatgttgcattttaaaagcttcagggtgtcaaaacgct 9946582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 480
Target Start/End: Complemental strand, 17132166 - 17132060
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||| ||||| ||||||| ||||||| |||||||| |||||| ||||| | | ||||||||| |||||||||||||||   ||| ||||||||| |||||    
T  17132166 ttaattgatgctgatgtaaccgttaaattgttgacctggatc-aaacattgccttttaaaagttccagggtgtcaaaatattacatttaatggttacaaa 17132068  T
Q  473 tgttcatt 480  Q
    || |||||    
T  17132067 tgatcatt 17132060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 16168468 - 16168530
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggt 324  Q
    |||||||||||||||| |||||||| | ||||||| |||||||||| |||||||||| |||||    
T  16168468 ggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggt 16168530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 275
Target Start/End: Complemental strand, 10963229 - 10963161
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagttt 275  Q
    ||||| ||||| ||||| ||||| ||||| ||||||||||||||||||| || |||||| |||||||||    
T  10963229 ttttaatttgatagaatattcaagttagttttttaaatttcaaaagttttaaataggtcattttagttt 10963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 32417593 - 32417641
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaa 251  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  32417593 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaa 32417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 32423434 - 32423482
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaa 251  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  32423434 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaa 32423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 274
Target Start/End: Original strand, 20575476 - 20575547
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||||| ||||||| ||| |||||| ||||| ||| ||||||||||| |||||| ||| ||||    
T  20575476 gtccttttagtttgatagaatttccaagttagtcctttaagttttaaaagtttcaaataggtcatttcagtt 20575547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 20575657 - 20575602
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa 258  Q
    ||||||||||||||||||||||  ||| |||||| ||||| |||||||||||||||    
T  20575657 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaa 20575602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 17131551 - 17131601
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttt 239  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  17131551 aaatatcacttttggtccttttaatttgatagaattttcaagttagtcttt 17131601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 11528166 - 11528097
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||| |||||||  ||||| | ||||||||| ||||||||| ||||||||||||||  ||||||||    
T  11528166 ggtcctttaagtttgaccgaattttcaagttagtcctttaagtttaaaaagtttcaaatatattctttta 11528097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 20575415 - 20575484
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||| ||||||   ||||||||| |||||||||  ||||||| |||||||| ||||||    
T  20575415 ggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtcctttta 20575484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 9901958 - 9902034
Alignment:
Q  198 ttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||| |||||||||||||| |||||||| ||| |||||  ||| | |||||||||||| || |||||| ||||||||    
T  9901958 ttttggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagtt 9902034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 473
Target Start/End: Original strand, 28630345 - 28630393
Alignment:
Q  425 tttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 473  Q
    |||||||||||| | ||||||||||| | ||||||||||||||||||||    
T  28630345 tttttaaaagcttcggggtgtcaaaatgttacgtttaatggtcacaaat 28630393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 9946761 - 9946718
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    ||||||||||||| ||||| |||||||||| |||||||||||||    
T  9946761 ttttagtttgacataatttccaaattagtcctttaaatttcaaa 9946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 9902382 - 9902333
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagttt 315  Q
    |||||||||||| |||||| | |||||||||||||||||||  |||||||    
T  9902382 cttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttt 9902333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 277
Target Start/End: Original strand, 16168615 - 16168648
Alignment:
Q  244 tttcaaaagtttcaattaggtccttttagtttga 277  Q
    ||||||||||||||| ||||||||||||||||||    
T  16168615 tttcaaaagtttcaaataggtccttttagtttga 16168648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 424 - 480
Target Start/End: Complemental strand, 10963150 - 10963094
Alignment:
Q  424 ctttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    ||||||||||| |  ||| |||||||||| |||||||||| |||||||||| |||||    
T  10963150 ctttttaaaagttttaggatgtcaaaacgatacgtttaatcgtcacaaatgatcatt 10963094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 3e-68; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 198 - 500
Target Start/End: Complemental strand, 52568320 - 52568020
Alignment:
Q  198 ttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtct 297  Q
    |||| ||| ||||||||||||| || |  ||| |||||  |||||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||||     
T  52568320 ttttagtcattttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagtttgatagaattctcaagtcagtcc 52568221  T
Q  298 tttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgt 395  Q
    ||||||||| |||||||||||||| | || |||| |||||||| ||  ||||||||||||||  ||||  | |||||||||| ||||||||||||||| |    
T  52568220 tttaagtttcaaaagtttcaaata-gatcctttagttgataaactatttcaccgttacccctgatgtccatatccgtttaaccgatgttgatgtagccat 52568122  T
Q  396 taagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaag 495  Q
    |||   ||||||||||||| |||   | | |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  52568121 taa---gttgacttggatcaaaatgatgcgttttaaaagctctagggtgtcaaaacgctacgtttaatggtcacaaatgatcatttatagtgatagaaag 52568025  T
Q  496 acaac 500  Q
    |||||    
T  52568024 acaac 52568020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 204 - 493
Target Start/End: Original strand, 52181720 - 52182011
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||||||| |||| |||| |||||  |||||||||  ||||||||||| | ||||||||||||||| |||||||  ||||||||| ||||||    
T  52181720 tccttttagtttgacaaaattctcaagttagttctttaaattttgaaagtttcaatcatgtccttttagtttgacagaattcccaagttagtcctttaag 52181819  T
Q  304 ttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagtt 401  Q
    ||| |||||||||||| | ||  ||||| |||||||| |||  |||||||||| || |||| | |      |||| |||||||||||||| |||||||||    
T  52181820 tttcaaaagtttcaaacatgtcattttaattgataaactatttcaccgttaccgctgctgtgaattaataattaattgatgttgatgtagtcgttaagtt 52181919  T
Q  402 gttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaa 493  Q
    |||||||| |||| |||   | | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  52181920 gttgactttgatcaaaatgttgccttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgatcatttatagtgctagaa 52182011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 189 - 498
Target Start/End: Complemental strand, 8408994 - 8408685
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||||||| ||| ||||||||||||| |||| |||| |||||| ||||| |||| ||| ||||||| | || |||||||||||| |||||| | |    
T  8408994 aaatatcacttttggtcattttagtttgacataattctcaagttagtcatttaagtttcgaaaatttcaatgatgttcttttagtttgacagaattttca 8408895  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttga 386  Q
    |||||||| ||||||||| |||||||||||||||||  | ||| |||||||| ||  |||||| ||||| |  | |||||||| ||||||||||||||||    
T  8408894 agttagtcatttaagtttcaaaagtttcaaataggtcatcttagttgataaactatttcaccgctacccttgttttcagtctctgtttaactgatgttga 8408795  T
Q  387 tgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagt 486  Q
      |||||||||||||||||||||||||| |||   |   ||||||||||| ||   ||||||||||||| |||||||| ||||  || |||||||||| |    
T  8408794 gatagccgttaagttgttgacttggatcaaaatgttgtcttttaaaagcttcaaaatgtcaaaacgctatgtttaatgatcac--atattcatttataat 8408697  T
Q  487 gctagaaagaca 498  Q
    ||||||||||||    
T  8408696 gctagaaagaca 8408685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 262 - 498
Target Start/End: Complemental strand, 19632306 - 19632070
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctac 359  Q
    |||||||||||||||| |||||||| || ||||||||| |||||| |||||||| ||||| ||  ||||| |||||||| ||  |||| ||||||| |      
T  19632306 ggtccttttagtttgacagaattctcaaattagtcttt-aagtttcaaaagttttaaatatgtcattttagttgataaactacttcactgttaccc-tgt 19632209  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||   ||| |||||||||||| || |||||||||| |||||||    
T  19632208 tgttagtctccatttaactgatgttgatgtagccgttaagttgttgactaggatcaaaatgttacattttaaaagctcaagagtgtcaaaactctacgtt 19632109  T
Q  460 taatggtcacaaatgttcatttatagtgctagaaagaca 498  Q
    ||| ||||||||||| |||||||||||||||||||||||    
T  19632108 taacggtcacaaatgatcatttatagtgctagaaagaca 19632070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 194 - 480
Target Start/End: Original strand, 31229249 - 31229533
Alignment:
Q  194 tcacttttcgtccttttagtttgacagaattttcaaattagtc-ttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagtt 292  Q
    |||| ||| ||| ||||| |||||||||||||||||||||||| |||||| |||| ||||||||| ||||||| ||||||||||| |||||||| |||||    
T  31229249 tcacatttggtctttttaatttgacagaattttcaaattagtccttttaagtttcgaaagtttcacttaggtctttttagtttgatagaattctcaagtt 31229348  T
Q  293 agtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgta 390  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||||| ||  ||||||||||| || ||||||||      |||| ||||| |||||||    
T  31229349 agtcatttaagtttcaaaagtttcaaataggttcttttagttgataaactatttcaccgttacctctgctgtcagttaataattaattgatgctgatgta 31229448  T
Q  391 gccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    | |||||| |||||   ||||| | |||  |||  |||||||| || ||||||| ||||||| |||||||||| |||||||||| |||||    
T  31229449 gtcgttaacttgtt---ttggaccaaaatgctaacttttaaaa-ct-cagggtggcaaaacgttacgtttaatcgtcacaaatgatcatt 31229533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 209 - 501
Target Start/End: Original strand, 19681203 - 19681492
Alignment:
Q  209 ttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtttta 308  Q
    |||||||||| ||||| |||| ||||| |||||| |||| ||| |||||||||| || ||||||||||| |||||||  ||||    | |||||| |  |    
T  19681203 ttagtttgaccgaattctcaagttagttttttaagtttcgaaattttcaattagatcattttagtttgacagaattccgaagt----cctttaaggtgca 19681298  T
Q  309 aaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttga 406  Q
    || | |||||||||||  ||||| |||||||| |||  |||| |||||||| || ||||| |    || |||||||||||||||||||||||||||||||    
T  19681299 aaggattcaaataggtcattttagttgataaactatttcaccattacccctgctatcagt-tataattgactgatgttgatgtagccgttaagttgttga 19681397  T
Q  407 cttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    ||||||||  ||   |   |||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19681398 cttggatcataatgttgtcttttaaaagctcgaggatgtcaaaacgttacgtttaatggtcacaaatgatcatttatagtgctagaaagacaact 19681492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 204 - 409
Target Start/End: Original strand, 5387131 - 5387338
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    ||||||||||||||| ||||||  || |||||| ||||| ||| ||||||||||||||  || ||||||||||| |||||||  ||||||| | ||||||    
T  5387131 tccttttagtttgactgaatttctaagttagtcctttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaag 5387230  T
Q  304 ttttaaaagtttcaaataggttcttttatttgataa--attatcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagtt 401  Q
    ||| ||||||||||||||| |  ||||| |||||||  | | |||||||||||||| |||||||||||||||||||||||| ||||||| || |||||||    
T  5387231 tttcaaaagtttcaaatagatctttttagttgataaacaatttcaccgttacccctgctgtcagtctccgtttaactgatgctgatgtaaccattaagtt 5387330  T
Q  402 gttgactt 409  Q
    | ||||||    
T  5387331 gatgactt 5387338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 354 - 501
Target Start/End: Complemental strand, 31229735 - 31229588
Alignment:
Q  354 ccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgc 453  Q
    |||| ||| ||||||| |||||||| |||||||||||| |||||||||||||||||| ||| |||  || | ||| |||||||| |||||||||||||||    
T  31229735 ccctgctgccagtctctgtttaactaatgttgatgtagtcgttaagttgttgacttgaatcaaaatgcttcctttcaaaagctcgagggtgtcaaaacgc 31229636  T
Q  454 tacgtttaatggtcacaaatgttcatttatagtgctagaaagacaact 501  Q
    || |||||||||||||||||| ||||||||||||||||||||||||||    
T  31229635 tatgtttaatggtcacaaatgatcatttatagtgctagaaagacaact 31229588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 262 - 496
Target Start/End: Complemental strand, 42116129 - 42115894
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattatcacc--gttacccctac 359  Q
    |||| ||||||||||| | |||| | ||||||||| ||||||||| |||||||| ||||||||  ||||| ||||||||  ||| |   || |||||||     
T  42116129 ggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtctttttaattgataaacaatctcattgtcacccctat 42116030  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    ||||||||||||||||||| |||| ||| || | ||| ||||| ||||||||||| |||| ||   ||||||   |||||||||||||||||||||||||    
T  42116029 tgtcagtctccgtttaactaatgtcgatttaactgttgagttgatgacttggatcaaaacgctgtgttttaagt-ctccagggtgtcaaaacgctacgtt 42115931  T
Q  460 taatggtcacaaatgttcatttatagtgctagaaaga 496  Q
    ||||| || ||||||||||||||||| ||||||||||    
T  42115930 taatgatctcaaatgttcatttatagggctagaaaga 42115894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 189 - 331
Target Start/End: Complemental strand, 26330141 - 26329999
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||||||| |||||||||||||||||||||| |||| |||||| ||||| |||  |||||||||||||| |||||||||||| | |||||||  |    
T  26330141 aaataccacttttagtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaattccca 26330042  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||    
T  26330041 agttagtcctttaagtttcaaaagtttcaaataggtcctttta 26329999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 182 - 322
Target Start/End: Original strand, 9319993 - 9320133
Alignment:
Q  182 ataggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagaga 281  Q
    |||||| ||||| |||||||||| |||||||||||||| |||| |||| ||||| |||||| |||| ||||||||||||| || |||||||||||| |||    
T  9319993 ataggtcaaataacacttttcgttcttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacaga 9320092  T
Q  282 attctaaagttagtcttttaagttttaaaagtttcaaatag 322  Q
    ||||| || |||||| ||||| ||| |||||||||||||||    
T  9320093 attctcaatttagtcatttaaatttcaaaagtttcaaatag 9320133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 204 - 340
Target Start/End: Complemental strand, 26330066 - 26329930
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 303  Q
    |||||||||||| ||||||||  ||| |||||| ||||| ||||||||||||||| |||||||||||||||||| | |||||  ||||||||| ||||||    
T  26330066 tccttttagttttacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacataattcccaagttagtcatttaag 26329967  T
Q  304 ttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    ||| |||||||||||||||||  ||||| ||||||||    
T  26329966 tttcaaaagtttcaaataggtcattttagttgataaa 26329930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 43098552 - 43098414
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    |||| |||||| || |||| |||||||||||||||||||||||  || |||||  ||||| |||| ||||||||||||||||||||||||||||| | ||    
T  43098552 taggctaaataccatttttggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaa 43098453  T
Q  283 ttctaaagttagtcttttaagttttaaaagtttcaaata 321  Q
    |||  ||||||||| ||||||||| ||||||||||||||    
T  43098452 ttcccaagttagtcctttaagtttcaaaagtttcaaata 43098414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 2789031 - 2788932
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttt 306  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||||||||| |||||| ||||||||||| |||||||| ||||||||| |||||||||    
T  2789031 ttttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttagtcatttaagttt 2788932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 44916333 - 44916227
Alignment:
Q  310 aagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgac 407  Q
    |||||||||||||||| ||||| |||||||| |||  ||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  44916333 aagtttcaaataggttattttagttgataaactatttcactgttacccctactgccagtctccgtttaactgatgttgatgtggccgttaagttgttgac 44916234  T
Q  408 ttggatc 414  Q
    || ||||    
T  44916233 tttgatc 44916227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 206 - 324
Target Start/End: Complemental strand, 2789092 - 2788974
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtt 305  Q
    |||||||||||||| |||||| ||||||||| ||||| |||   |||||||||||||||| ||||||||||| |||||| | ||||||||| ||||||||    
T  2789092 cttttagtttgacaaaatttttaaattagtcctttaagttttggaagtttcaattaggtcattttagtttgacagaattttcaagttagtcctttaagtt 2788993  T
Q  306 ttaaaagtttcaaataggt 324  Q
    | |||||||||||||||||    
T  2788992 tcaaaagtttcaaataggt 2788974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 262 - 473
Target Start/End: Original strand, 52567746 - 52567958
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctac 359  Q
    |||||||||||||||| |||||||| ||||||||| ||||||||| |||||||| ||||||||  ||||| |||||||| ||  |||| ||||| ||| |    
T  52567746 ggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttactcctgc 52567845  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
    |||||||      |||| |||||||||||||| ||||||||| ||| |||||||| |||   |   |||||||| || ||||||||||||||| || | |    
T  52567846 tgtcagttaataattaattgatgttgatgtagtcgttaagttattgtcttggatcaaaatgttgtcttttaaaaacttcagggtgtcaaaacgttatg-t 52567944  T
Q  460 taatggtcacaaat 473  Q
    ||||||||||||||    
T  52567945 taatggtcacaaat 52567958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 189 - 293
Target Start/End: Original strand, 19631753 - 19631857
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||||||| ||| ||||||||| ||||||| |||| |||| |||||| ||||| |||| ||||||||||||||||||||||||||||| |||||||| |    
T  19631753 aaatatcacgtttggtccttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctca 19631852  T
Q  289 agtta 293  Q
    |||||    
T  19631853 agtta 19631857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 249 - 340
Target Start/End: Original strand, 22025103 - 22025194
Alignment:
Q  249 aaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||||  ||||| || |||||||||||||||||||||||| ||||||||    
T  22025103 aaagtttcaattaggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaa 22025194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 189 - 310
Target Start/End: Original strand, 35023736 - 35023857
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    |||||| |||||| ||||||||||||||| |||||| | ||||||||||||||  ||| ||||||||||||||| || |||||||| || | |||||| |    
T  35023736 aaatataacttttagtccttttagtttgaaagaattattaaattagtcttttacgttttaaaagtttcaattagatcattttagttcgataaaattctta 35023835  T
Q  289 agttagtcttttaagttttaaa 310  Q
    | |||||||||||| |||||||    
T  35023836 aattagtcttttaaattttaaa 35023857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 2788774 - 2788886
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    ||||| ||||| |||||||  ||||||||||||||   |||| |||| |||||| ||||| |||| ||||||||||||||||||||||||||||| ||||    
T  2788774 taggtcaaataccacttttaatccttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaa 2788873  T
Q  283 ttctaaagttagt 295  Q
    |||| ||||||||    
T  2788874 ttctcaagttagt 2788886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 22025428 - 22025301
Alignment:
Q  196 acttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagt 295  Q
    |||||| ||| ||||||||||||| |||| |||| |||||| || || |||| |||||||||||||||| |||||||||||| |||||||  ||||||||    
T  22025428 acttttagtcattttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtttgacagaattcccaagttagt 22025329  T
Q  296 cttttaagttttaaaagtttcaaataggt 324  Q
    | |||||| || ||| |||||||||||||    
T  22025328 cctttaag-ttcaaaggtttcaaataggt 22025301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 316
Target Start/End: Original strand, 35046437 - 35046545
Alignment:
Q  208 tttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtttt 307  Q
    |||||||||||| ||||||||| |||||| ||||| |||| ||||||| |||||| |||||||||||||| |||||||  || |||||| |||||||||     
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtttgacagaattcctaaattagtcctttaagtttc 35046536  T
Q  308 aaaagtttc 316  Q
    |||||||||    
T  35046537 aaaagtttc 35046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 281 - 494
Target Start/End: Original strand, 42115654 - 42115869
Alignment:
Q  281 aattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaact 378  Q
    |||||| ||||||||| ||||||| | |||||||| ||||| || ||||||  | ||||| |||  ||| |||| || |  ||||| |||||||||||||    
T  42115654 aattctcaagttagtcctttaagtctcaaaagttttaaataagtccttttagataataaactatttcacggttatccatgttgtcattctccgtttaact 42115753  T
Q  379 gatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttca 478  Q
    |||| |||||| | | |||||||| ||||||||||| ||||  | | ||| ||| ||||||||  |||| || | | ||||||||||||||||||| |||    
T  42115754 gatgctgatgtgggcattaagttgctgacttggatcaaaacgatgcgtttcaaaggctccaggtagtcagaatgttgcgtttaatggtcacaaatgatca 42115853  T
Q  479 tttatagtgctagaaa 494  Q
    ||||||| ||||||||    
T  42115854 tttatagagctagaaa 42115869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 373 - 480
Target Start/End: Complemental strand, 52866311 - 52866205
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||||||||| ||||||| ||||||||||||| ||||||||| ||||  | ||||||||||||||||||||||||||||  || ||||||| ||||||||    
T  52866311 ttaactgatgctgatgtacccgttaagttgttcacttggatcaaaacgtttctttttaaaagctccagggtgtcaaaacatta-gtttaatcgtcacaaa 52866213  T
Q  473 tgttcatt 480  Q
    || |||||    
T  52866212 tgatcatt 52866205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 480
Target Start/End: Original strand, 8408393 - 8408625
Alignment:
Q  250 aagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcac 347  Q
    ||||||||| ||| |||||||||||||| | |||||| |||| |||||||||||||| |||||||||||||| ||  ||||| |||||||  ||  ||||    
T  8408393 aagtttcaaatagatccttttagtttgacaaaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagttgataagctatttcac 8408492  T
Q  348 cgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagc-tccagggtgtc 446  Q
    |||||  ||||| ||||||      |||||  ||||||| |||||| |||||||||||||||| ||| |||   | | ||||| |||| || | ||||||    
T  8408493 cgtta-acctacagtcagttaataattaaccaatgttgaggtagcctttaagttgttgacttgaatcaaaatgttgccttttacaagcttcaaaggtgtc 8408591  T
Q  447 aaaacgctacgtttaatggtcacaaatgttcatt 480  Q
    |||||| || |||||||||||||||||| |||||    
T  8408592 aaaacgttatgtttaatggtcacaaatgatcatt 8408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 340
Target Start/End: Original strand, 43098172 - 43098319
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||||||| ||||||||||||||||| |||||  || |||||| ||||| |||  |||||||||||||||||||||||||||   ||| |||  |    
T  43098172 aaataccacttttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtttaccagagttccga 43098271  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    ||||||||    |||||| |||||||||||||| || |||||| ||||||||    
T  43098272 agttagtc----aagtttcaaaagtttcaaataagtccttttagttgataaa 43098319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 41735738 - 41735884
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaat 283  Q
    |||||||||| ||||||| ||||||||||||| |||  ||| |||| |||||  ||| | |||  |||||||||| | |||||||||||||| | | |||    
T  41735738 aggttaaataccacttttggtccttttagtttaacaagattctcaagttagttcttttagttttgaaagtttcaact-ggtccttttagtttaacataat 41735836  T
Q  284 tctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    ||  ||||||||| ||||||||| ||||||||||||||||| ||||||    
T  41735837 tcccaagttagtcctttaagtttcaaaagtttcaaataggtcctttta 41735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 494
Target Start/End: Original strand, 44915937 - 44916134
Alignment:
Q  298 tttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgt 395  Q
    ||||||||| |||||||| ||| ||||  ||||| ||||||||||||  ||| ||||||||| || ||| ||| | |||||||||| | ||||| | | |    
T  44915937 tttaagtttcaaaagttttaaaaaggtctttttagttgataaattatttcactgttacccctgctatcaatcttcatttaactgatat-gatgtggtctt 44916035  T
Q  396 taagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaa 494  Q
    ||||||| |||||| |||| |||||||   ||||| | ||| || |||||||||||||| | |||||  |||||||||| |||||||||| ||||||||    
T  44916036 taagttgctgactttgatcaaaacactgagttttagaggctacatggtgtcaaaacgctgcttttaaaagtcacaaatgatcatttatagggctagaaa 44916134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 23085345 - 23085220
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaat 283  Q
    ||||||||||||| |||| || ||||||||||||||||| ||| || |||||| ||||| |||||||||||||||||||   |||||||||| | |||||    
T  23085345 aggttaaatatcatttttggttcttttagtttgacagaaattttaagttagtc-tttaagtttcaaaagtttcaattagaatcttttagttttatagaat 23085247  T
Q  284 tctaaagttagtcttttaagttttaaa 310  Q
    | | || |||||| ||||| |||||||    
T  23085246 tttcaaattagtcctttaaattttaaa 23085220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 188 - 306
Target Start/End: Complemental strand, 52183559 - 52183441
Alignment:
Q  188 taaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattcta 287  Q
    |||||| ||| ||| ||||||||||||| ||| |||| |||| |||||| ||||| |||| ||||||||||||||| ||||||||||||| |||||||      
T  52183559 taaataccacgtttggtccttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtttgacagaattccc 52183460  T
Q  288 aagttagtcttttaagttt 306  Q
    |||  |||| |||||||||    
T  52183459 aagccagtcctttaagttt 52183441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 43098472 - 43098369
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||||||||||| ||||  ||| |||||| ||||| ||||||||||||||| || ||| ||||||||| | |||||||  ||||||||| |||||    
T  43098472 gtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtttaacagaattcccaagttagtcctttaa 43098373  T
Q  303 gttt 306  Q
    ||||    
T  43098372 gttt 43098369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 41735816 - 41735897
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaatt 284  Q
    ||||||||||||| ||| ||||  ||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||||    
T  41735816 gtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacagaatt 41735897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 52567733 - 52567818
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||| ||| |||||||||||||||||||||| | || |||||| ||||| |||||||||||| || |||||| ||||||||    
T  52567733 aaatatcacgtttggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagtt 52567818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 52865946 - 52866063
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||||||| |||||||||||||||||||||| |||| |||||| ||||| |||  ||||||| ||||| || |||||||||||| | ||| || |    
T  52865946 aaataccactttttgtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtttgacaaaatgctca 52866045  T
Q  289 agttagtcttttaagttt 306  Q
    |  ||||| |||||||||    
T  52866046 atctagtcctttaagttt 52866063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 436
Target Start/End: Complemental strand, 5387677 - 5387506
Alignment:
Q  267 ttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtca 364  Q
    ||||||||||| | |||||| |||| || | ||||| |||||||||||||||||| || |||| | |||||||||||  |||||||||||||| |||| |    
T  5387677 ttttagtttgacaaaattcttaagtaagacctttaaattttaaaagtttcaaatatgtactttcacttgataaattatttcaccgttacccctgctgtta 5387578  T
Q  365 gtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagct 436  Q
    ||      ||||||||||||||||||| | |||| ||||||| ||| ||| || | || | |||||||||||    
T  5387577 gttaataattaactgatgttgatgtagtctttaaattgttgatttgtatcaaatcgcttccttttaaaagct 5387506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 26329808 - 26329883
Alignment:
Q  244 tttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaa 319  Q
    |||| ||||||||||||||||||||||||||||| ||||||   ||||||| | ||||||||| ||||||||||||    
T  26329808 tttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagtttcaaa 26329883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 373 - 480
Target Start/End: Complemental strand, 52182116 - 52182010
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||   |   |||||||||||||||||| |||||||  || ||||||| ||||||||    
T  52182116 ttaactgatgttgatgtagccgttaagttgttgacttaaatcaaaatgatgtcttttaaaagctccagggt-tcaaaacattatgtttaatagtcacaaa 52182018  T
Q  473 tgttcatt 480  Q
    || |||||    
T  52182017 tgatcatt 52182010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 36890726 - 36890636
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||||||||  ||||||||||||||||||||||| || ||| || ||||| ||| ||||||||  | |||||| ||||||||    
T  36890726 aggttaaatatcacttttaatccttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagtt 36890636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 9320077 - 9320142
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtcctttta 271  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||||| ||| || |||||    
T  9320077 cttttagtttgacagaattctcaatttagtcatttaaatttcaaaagtttcaaatagatcatttta 9320142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 426 - 495
Target Start/End: Original strand, 30542849 - 30542918
Alignment:
Q  426 ttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaag 495  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||  ||| ||| ||||||||||||    
T  30542849 ttttaaaaactctagggtgtcaaaacgctacgtttaatgatcacaaataatcacttacagtgctagaaag 30542918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 19632310 - 19632235
Alignment:
Q  198 ttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||| |||||||||||| || || ||| ||||||||    
T  19632310 ttttggtccttttagtttgacagaattctcaaattagtc-tttaagtttcaaaagttttaaatatgtcattttagtt 19632235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 52865960 - 52866028
Alignment:
Q  263 gtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||| ||||||| || || |||||||||    
T  52865960 gtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttctttta 52866028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 26330007 - 26329936
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    ||||||||||||||||| ||||  ||| |||||| ||||| ||||||||||||||| |||||| ||||||||    
T  26330007 gtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttcaaataggtcattttagtt 26329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 340
Target Start/End: Complemental strand, 35024050 - 35023963
Alignment:
Q  253 tttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    ||||||||| ||| ||||||||| | | |||||| ||||||||||||||||||||||||||||  ||| | | |||||| ||||||||    
T  35024050 tttcaattatgtctttttagttttacacaattctcaagttagtcttttaagttttaaaagtttttaattgatccttttagttgataaa 35023963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 340
Target Start/End: Complemental strand, 36890706 - 36890630
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaa 340  Q
    |||||||||||||| |||||| | |||||| || ||||||||||||||||||  |||||||  ||||| ||||||||    
T  36890706 tccttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagttgataaa 36890630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 2508246 - 2508321
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa 258  Q
    |||||||||||  | ||||  |||||||||||||||||||||| ||| |||||| |||||  ||||||||||||||    
T  2508246 taggttaaatactatttttgatccttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaa 2508321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 26329827 - 26329882
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa 258  Q
    ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||    
T  26329827 gtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagtttcaa 26329882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 35023750 - 35023805
Alignment:
Q  263 gtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaa 318  Q
    ||||||||||||||| |||||| | || ||||||||||| ||||||||||||||||    
T  35023750 gtccttttagtttgaaagaattattaaattagtcttttacgttttaaaagtttcaa 35023805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 52181779 - 52181834
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaa 258  Q
    ||||||||||||||||||||||  ||| |||||| ||||| |||||||||||||||    
T  52181779 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaa 52181834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 8408407 - 8408477
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||||||||||||||| |||| |||| | |||||||||| ||| ||||||||||| || ||| ||||||||    
T  8408407 tccttttagtttgacaaaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagtt 8408477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 36890399 - 36890533
Alignment:
Q  190 aatatcacttttcgtccttttagtttgacagaattttcaaattagtcttt-taaatttcaaaagtttcaattaggtccttttag-tttgagagaattcta 287  Q
    |||| ||||||| ||||||||||| |||| |||||  ||| | |||| || ||| |||  |||||||||||||| || |||| | ||||| |||||||      
T  36890399 aataccacttttggtccttttagtatgactgaattcccaagtcagtccttctaagttttgaaagtttcaattagatcatttttggtttgacagaattccg 36890498  T
Q  288 aagtt-agtcttttaagttttaaaagtttcaaata 321  Q
    ||||| |||||||||||||| ||||||||||||||    
T  36890499 aagtttagtcttttaagtttcaaaagtttcaaata 36890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 42116142 - 42116060
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtcctttta 271  Q
    ||||| || |||| ||| ||||||||||||| |||||| || |||||| ||||| |||||||||||| || |||||| |||||    
T  42116142 aaataccatttttggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtcttttta 42116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 9320017 - 9320082
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||| | |||||| |||||||| ||||||||||  |||||||||| || |||||||||    
T  9320017 cttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttctttta 9320082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 22025358 - 22025274
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagt 291  Q
    |||||||||||||||||||  ||| |||||| ||||| || |||| ||||||| |||||  ||||||||||| |||||||| ||||    
T  22025358 cttttagtttgacagaattcccaagttagtcctttaagtt-caaaggtttcaaataggtaattttagtttgacagaattctcaagt 22025274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 44916377 - 44916324
Alignment:
Q  197 cttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    ||||| ||||||||||||||||| ||||||||| |||||| ||||| |||||||    
T  44916377 cttttagtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 35046493 - 35046545
Alignment:
Q  204 tccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttc 256  Q
    |||||||||||||||||||||   ||||||||| ||||| |||||||||||||    
T  35046493 tccttttagtttgacagaattcctaaattagtcctttaagtttcaaaagtttc 35046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 2788795 - 2788862
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    ||||||||||||||   |||||| ||||||||| |||||||||  |||||||||| ||||| ||||||    
T  2788795 tccttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtcctttta 2788862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 41735876 - 41735923
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    ||||||||||||||||||||||| ||| | |||| |||||||||||||    
T  41735876 gtccttttagtttgacagaatttccaagtcagtcctttaaatttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 411
Target Start/End: Original strand, 19631934 - 19631972
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttgg 411  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  19631934 ttaattgatgctgatgtagccgttaagttgttgacttgg 19631972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 320
Target Start/End: Complemental strand, 35046632 - 35046550
Alignment:
Q  238 tttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaat 320  Q
    ||||| |||| ||||||| |||| || | ||||||||||| | |||||  ||||||||| ||||||||| |||||||| ||||    
T  35046632 tttaagtttcgaaagttttaatttggccattttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 2909182 - 2909247
Alignment:
Q  266 cttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||| | |||||||| ||||||||  |||||||||  ||||| |||| ||||||||||||    
T  2909182 cttttagtttcacagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttctttta 2909247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 2909242 - 2909287
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaaa 251  Q
    |||||||||| |||||||| |||| |||||| ||||||||||||||    
T  2909242 cttttagttttacagaattctcaagttagtcctttaaatttcaaaa 2909287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 52183545 - 52183484
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaatagg 323  Q
    |||||||||||||| | | |||||| ||||||||| |||||||||  |||||||||| ||||    
T  52183545 ggtccttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattagg 52183484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 2508267 - 2508323
Alignment:
Q  264 tccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaat 320  Q
    |||||||||||||| ||||||   ||||||||| |||||| || |||||||||||||    
T  2508267 tccttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat 2508323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 8970834 - 8970886
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaat 259  Q
    ||||| |||||||||||| |||||||||  |||||| |||| |||||||||||    
T  8970834 ttttaatttgacagaattctcaaattagatttttaagtttcgaaagtttcaat 8970886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 22025047 - 22025091
Alignment:
Q  180 taataggttaaatatcacttttcgtccttttagtttgacagaatt 224  Q
    |||||||  ||||| ||||||| ||||||||||||||||||||||    
T  22025047 taataggccaaataccacttttggtccttttagtttgacagaatt 22025091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 331
Target Start/End: Complemental strand, 22025417 - 22025353
Alignment:
Q  267 ttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    ||||||||||| | |||| | ||||||||| || ||||||  |||||||||| ||||||||||||    
T  22025417 ttttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttctttta 22025353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 23085212 - 23085172
Alignment:
Q  207 ttttagtttgacagaattttcaaattagtcttttaaatttc 247  Q
    ||||||||||||| |||| ||||||||||| ||||||||||    
T  23085212 ttttagtttgacaaaattatcaaattagtcctttaaatttc 23085172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 30543185 - 30543141
Alignment:
Q  206 cttttagtttgacagaattttcaaattagtcttttaaatttcaaa 250  Q
    |||||||||||||| |||| |||| |||||| |||||||||||||    
T  30543185 cttttagtttgacaaaattatcaagttagtcctttaaatttcaaa 30543141  T

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Target: scaffold0746 (Bit Score: 119; Significance: 2e-60; HSPs: 2)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 203 - 498
Target Start/End: Complemental strand, 655 - 359
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||| ||||| ||||||||||| |||||| ||||| |||  ||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||    
T  655 gtccttttaatttgatagaattttcaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaa 556  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
     ||| |||||||||||||||||  ||||| |||||||| ||  |||| ||||||||| | |||| | ||||||||||| |||  ||||||||||||||||    
T  555 atttcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccctgccgtcaatatccgtttaactaatgccgatgtagccgttaagt 456  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagaca 498  Q
    ||||||||||||||  ||   | | |||||||||||||| ||||| |||| || || ||||||  ||||||||| | |||||||||||||||||||||    
T  455 tgttgacttggatcacaatgttgccttttaaaagctccatggtgt-aaaaagcaacttttaataatcacaaatggttatttatagtgctagaaagaca 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 183 - 472
Target Start/End: Original strand, 5 - 294
Alignment:
Q  183 taggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaa 282  Q
    |||| |||||||||| ||| ||||||||||||||||| |||| |||| |||||| || || |||||||||||| || ||  ||||||||||||||  |||    
T  5 taggctaaatatcacatttggtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtttgaccgaa 104  T
Q  283 ttctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactga 380  Q
    |||  ||||||||  ||||||||| |||||||||||||| ||  ||||| |||||||| ||  |||| ||||| |||  |||||||      |||| |||    
T  105 ttcctaagttagt-atttaagtttgaaaagtttcaaatatgtcattttagttgataaactatttcactgttactcctgttgtcagttaataattaattga 203  T
Q  381 tgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||||||||| | |||||||||||||  |||||| || |  | | ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  204 tgttgatgtaacggttaagttgttgatgtggatcaaagcgatgccttttaaaagcttc-gggtgtcaaaacgttacgtttaatggtcacaaa 294  T

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Target: scaffold0070 (Bit Score: 119; Significance: 2e-60; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 203 - 498
Target Start/End: Original strand, 28548 - 28844
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    ||||||||| ||||||||||||| ||| |||||| ||||| |||  ||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||    
T  28548 gtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaa 28647  T
Q  303 gttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctactgtcagtctccgtttaactgatgttgatgtagccgttaagt 400  Q
      || |||||||||||||||||  ||||| |||||||| ||  |||| ||||||||| | |||||| |||||| ||||||||||||||||||| ||||||    
T  28648 aattcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccctgccgtcagtatccgttaaactgatgttgatgtagccattaagt 28747  T
Q  401 tgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatagtgctagaaagaca 498  Q
    ||||||||||||||  ||   | | |||||||||||| | ||||| |||| || || ||||||  ||||||||| ||||||||||| |||||||||||    
T  28748 tgttgacttggatcacaatgttgccttttaaaagctcaatggtgt-aaaaagcaacttttaataatcacaaatggtcatttatagtactagaaagaca 28844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 373 - 472
Target Start/End: Complemental strand, 29007 - 28909
Alignment:
Q  373 ttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaa 472  Q
    |||| ||||||||||||||| ||||||||||||| ||||||| ||||  | | ||||||||||| | ||||||||||||| ||||||||||| |||||||    
T  29007 ttaattgatgttgatgtagcggttaagttgttgatttggatcaaaacgatgccttttaaaagcttc-gggtgtcaaaacgttacgtttaatgatcacaaa 28909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 73; Significance: 4e-33; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 203 - 331
Target Start/End: Complemental strand, 45323 - 45195
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 302  Q
    |||||||| |||||||| |||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||| | |||| | || |||||| |||||    
T  45323 gtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcatttaa 45224  T
Q  303 gttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||||||| | ||||||    
T  45223 gttttaaaagtttcaaatagatcctttta 45195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 286
Target Start/End: Complemental strand, 45263 - 45180
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattct 286  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||| ||||||||||| ||| |||||||| ||||| ||||||||    
T  45263 gtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattct 45180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 45324 - 45255
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    ||||||||| |||||| | |||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  45324 ggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtcctttta 45255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 262 - 485
Target Start/End: Original strand, 16176 - 16399
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaatta--tcaccgttacccctac 359  Q
    |||||||||||||||| | ||||   || |||||| ||||||||| |||||||| ||||||||  ||||| |||||||| ||  |||||||||||||| |    
T  16176 ggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagttgataaactatttcaccgttacccctgc 16275  T
Q  360 tgtcagtctccgtttaactgatgttgatgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtt 459  Q
      ||||||||||||||||| ||| |||||| | ||||| |||| |||||| |||| |||||   | |||||||   || |||||||||||||  | ||||    
T  16276 --tcagtctccgtttaactaatgatgatgtggtcgttaggttgctgacttcgatcaaaacaacgcgttttaaagtgtctagggtgtcaaaactttgcgtt 16373  T
Q  460 taatggtcacaaatgttcatttatag 485  Q
    ||||||||| ||||| ||||||||||    
T  16374 taatggtcagaaatgatcatttatag 16399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 16158 - 16248
Alignment:
Q  184 aggttaaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtt 274  Q
    |||| ||||||| ||||| ||||||||||||||| | ||||| |||||||||| ||||| ||| |||||||| || |||||| ||||||||    
T  16158 aggtcaaatatctcttttggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagtt 16248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 288 - 495
Target Start/End: Complemental strand, 16642 - 16434
Alignment:
Q  288 aagttagtcttttaagttttaaaagtttcaaataggttcttttatttgataaattat--caccgttacccctactgtcagtctccgtttaactgatgttg 385  Q
    |||||| || ||||||||| |||||||| ||||| ||  ||||| |||||||| |||  ||| |||| ||||  |||||||||||||| |||||||  ||    
T  16642 aagttaatcctttaagtttaaaaagttttaaataagtcattttagttgataaactatttcacagttatccctgttgtcagtctccgttaaactgatactg 16543  T
Q  386 atgtagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgttcatttatag 485  Q
    | || |||||||||||| ||||| ||||| ||||  |   ||| ||| ||||||||  |||| |||| |   |||||| |||||||||| |||||||||     
T  16542 a-gtggccgttaagttgctgactaggatcaaaacgatgagtttcaaaggctccaggtagtcataacgttgtttttaatagtcacaaatgatcatttataa 16444  T
Q  486 tgctagaaag 495  Q
     |||||||||    
T  16443 ggctagaaag 16434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 60; Significance: 2e-25; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 324
Target Start/End: Complemental strand, 124491 - 124356
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||||||| |||||||| |||||| | ||||  ||| |||||| ||||| |||| ||||||||||||||||||||||||||||| ||||||   |    
T  124491 aaataccacttttggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatttcca 124392  T
Q  289 agttagtcttttaagttttaaaagtttcaaataggt 324  Q
    |||||||| |||||||||  |||||||||| |||||    
T  124391 agttagtcctttaagtttcgaaagtttcaattaggt 124356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 189 - 319
Target Start/End: Original strand, 124133 - 124262
Alignment:
Q  189 aaatatcacttttcgtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaa 288  Q
    ||||| ||||||| ||||||||||||||||| ||||  ||| |||||| ||||| |||||||||||||||  |||| |||||||||||| |||||||  |    
T  124133 aaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattccca 124232  T
Q  289 agttagtcttttaagttttaaaagtttcaaa 319  Q
    | |||||| ||||||||| ||||||||||||    
T  124233 atttagtc-tttaagtttcaaaagtttcaaa 124262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 203 - 285
Target Start/End: Complemental strand, 124417 - 124335
Alignment:
Q  203 gtccttttagtttgacagaattttcaaattagtcttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattc 285  Q
    ||||||||||||||||||||||| ||| |||||| ||||| |||| ||||||||||||||||| ||||||||||| |||||||    
T  124417 gtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaattc 124335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 124146 - 124215
Alignment:
Q  262 ggtccttttagtttgagagaattctaaagttagtcttttaagttttaaaagtttcaaataggttctttta 331  Q
    |||||||||||||||| | |||||  ||||||||| ||||||||| |||||||||||| |||| ||||||    
T  124146 ggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgctttta 124215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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