View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19496_low_10 (Length: 239)

Name: NF19496_low_10
Description: NF19496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19496_low_10
NF19496_low_10
[»] chr7 (41 HSPs)
chr7 (1-218)||(1286729-1286946)
chr7 (1-208)||(39959118-39959328)
chr7 (9-199)||(27995060-27995253)
chr7 (7-208)||(5559097-5559303)
chr7 (1-108)||(10619892-10620000)
chr7 (1-102)||(23679455-23679557)
chr7 (1-156)||(28256536-28256694)
chr7 (1-129)||(35215248-35215377)
chr7 (1-101)||(42990599-42990700)
chr7 (50-148)||(4187663-4187763)
chr7 (39-194)||(1286374-1286530)
chr7 (6-108)||(33235481-33235584)
chr7 (40-198)||(35214806-35214968)
chr7 (42-191)||(1349114-1349269)
chr7 (40-116)||(27995543-27995620)
chr7 (17-101)||(29590711-29590795)
chr7 (14-74)||(8040093-8040153)
chr7 (79-193)||(21412931-21413047)
chr7 (44-107)||(28104330-28104394)
chr7 (40-149)||(20183820-20183930)
chr7 (32-99)||(8039747-8039815)
chr7 (22-198)||(20366482-20366662)
chr7 (48-117)||(20101904-20101974)
chr7 (78-194)||(21412870-21412988)
chr7 (7-90)||(1441064-1441151)
chr7 (6-74)||(5805483-5805551)
chr7 (51-118)||(34951309-34951377)
chr7 (81-120)||(42990520-42990559)
chr7 (53-212)||(5805024-5805186)
chr7 (50-149)||(19925311-19925412)
chr7 (50-208)||(23150629-23150790)
chr7 (76-198)||(34951462-34951586)
chr7 (39-89)||(28256908-28256959)
chr7 (93-198)||(31893493-31893600)
chr7 (66-198)||(33879505-33879640)
chr7 (44-89)||(28104633-28104679)
chr7 (84-126)||(31893544-31893586)
chr7 (78-198)||(40904691-40904813)
chr7 (53-198)||(1346480-1346624)
chr7 (40-108)||(33235126-33235195)
chr7 (155-208)||(36566268-36566321)
[»] chr6 (23 HSPs)
chr6 (1-154)||(10962783-10962938)
chr6 (11-208)||(11527979-11528179)
chr6 (32-198)||(17180094-17180263)
chr6 (7-126)||(17179698-17179818)
chr6 (54-197)||(20575413-20575559)
chr6 (1-101)||(10862511-10862612)
chr6 (8-101)||(17131620-17131715)
chr6 (40-102)||(10407347-10407410)
chr6 (66-198)||(32417469-32417604)
chr6 (66-198)||(32423310-32423445)
chr6 (1-89)||(2839985-2840074)
chr6 (80-190)||(32417537-32417649)
chr6 (80-190)||(32423378-32423490)
chr6 (40-126)||(24139471-24139558)
chr6 (8-127)||(17132149-17132266)
chr6 (40-108)||(9901991-9902060)
chr6 (1-74)||(9946639-9946711)
chr6 (1-89)||(24139100-24139190)
chr6 (44-95)||(10407709-10407761)
chr6 (39-89)||(11527638-11527689)
chr6 (48-118)||(32417684-32417755)
chr6 (48-118)||(32423525-32423596)
chr6 (133-212)||(2840110-2840190)
[»] chr8 (35 HSPs)
chr8 (16-190)||(9276933-9277109)
chr8 (9-199)||(31169426-31169618)
chr8 (8-198)||(25737103-25737296)
chr8 (40-212)||(30576632-30576807)
chr8 (1-199)||(8714286-8714488)
chr8 (8-101)||(44040860-44040954)
chr8 (1-101)||(23553453-23553554)
chr8 (36-193)||(25730091-25730252)
chr8 (1-108)||(4613831-4613939)
chr8 (45-129)||(34686875-34686960)
chr8 (14-208)||(39701339-39701536)
chr8 (5-73)||(6235857-6235925)
chr8 (36-191)||(25737577-25737736)
chr8 (39-195)||(39700887-39701046)
chr8 (39-126)||(5358656-5358744)
chr8 (43-129)||(35433907-35433994)
chr8 (39-126)||(13771431-13771519)
chr8 (48-197)||(36359901-36360053)
chr8 (52-122)||(16208674-16208745)
chr8 (1-208)||(40552751-40552961)
chr8 (44-132)||(9276550-9276639)
chr8 (43-212)||(8713831-8714003)
chr8 (131-198)||(35433896-35433964)
chr8 (1-73)||(40553181-40553253)
chr8 (51-104)||(35434313-35434367)
chr8 (44-108)||(13771843-13771908)
chr8 (78-178)||(14870959-14871060)
chr8 (48-108)||(29794238-29794299)
chr8 (50-108)||(9770768-9770827)
chr8 (66-198)||(43423091-43423225)
chr8 (40-73)||(5359042-5359075)
chr8 (51-111)||(34686499-34686560)
chr8 (48-198)||(45017746-45017899)
chr8 (39-126)||(23553839-23553927)
chr8 (43-126)||(44041263-44041347)
[»] chr4 (23 HSPs)
chr4 (7-126)||(31229329-31229449)
chr4 (7-126)||(52567757-52567877)
chr4 (7-148)||(5387551-5387693)
chr4 (7-108)||(52181807-52181909)
chr4 (52-129)||(2508670-2508748)
chr4 (40-156)||(52568159-52568276)
chr4 (39-105)||(44915933-44916000)
chr4 (89-198)||(23085220-23085330)
chr4 (1-89)||(19631869-19631958)
chr4 (43-126)||(19632212-19632295)
chr4 (136-199)||(52567742-52567806)
chr4 (48-126)||(36890618-36890697)
chr4 (39-193)||(5387131-5387288)
chr4 (43-126)||(8408826-8408910)
chr4 (17-73)||(30543077-30543133)
chr4 (70-118)||(42116062-42116110)
chr4 (48-126)||(22025127-22025206)
chr4 (51-193)||(26329921-26330066)
chr4 (131-198)||(42116064-42116132)
chr4 (84-154)||(35046473-35046544)
chr4 (66-213)||(2788964-2789114)
chr4 (46-106)||(8408436-8408497)
chr4 (1-73)||(19681317-19681388)
[»] chr2 (16 HSPs)
chr2 (7-108)||(11871681-11871783)
chr2 (1-101)||(15506429-15506530)
chr2 (1-98)||(20535544-20535642)
chr2 (1-89)||(27893136-27893225)
chr2 (42-108)||(42117172-42117239)
chr2 (93-212)||(39301841-39301962)
chr2 (39-126)||(36196466-36196554)
chr2 (48-193)||(30907288-30907434)
chr2 (81-126)||(39301889-39301934)
chr2 (32-111)||(15506074-15506154)
chr2 (50-108)||(34336126-34336185)
chr2 (45-126)||(19080702-19080784)
chr2 (50-90)||(5117052-5117093)
chr2 (40-108)||(27893524-27893593)
chr2 (66-126)||(34336048-34336109)
chr2 (43-126)||(31264125-31264209)
[»] chr1 (19 HSPs)
chr1 (1-108)||(8902853-8902961)
chr1 (1-108)||(27351143-27351251)
chr1 (40-208)||(34254489-34254660)
chr1 (17-108)||(48352682-48352774)
chr1 (43-198)||(10686680-10686838)
chr1 (48-111)||(44963928-44963992)
chr1 (48-118)||(1765775-1765846)
chr1 (1-94)||(48352306-48352400)
chr1 (1-74)||(27351468-27351541)
chr1 (49-103)||(2965528-2965583)
chr1 (12-60)||(34254949-34254997)
chr1 (1-75)||(39302618-39302692)
chr1 (40-104)||(8903242-8903307)
chr1 (40-198)||(29419008-29419173)
chr1 (88-190)||(35701450-35701553)
chr1 (41-89)||(10685950-10685999)
chr1 (84-195)||(17898796-17898909)
chr1 (66-126)||(17898837-17898898)
chr1 (1-45)||(10686352-10686396)
[»] chr5 (33 HSPs)
chr5 (6-198)||(18248958-18249153)
chr5 (66-198)||(18951303-18951438)
chr5 (1-145)||(20728969-20729114)
chr5 (22-129)||(5734534-5734641)
chr5 (43-126)||(18237926-18238010)
chr5 (1-199)||(36418322-36418525)
chr5 (53-208)||(1722490-1722648)
chr5 (8-156)||(13543533-13543683)
chr5 (47-109)||(13543178-13543241)
chr5 (1-98)||(19279146-19279244)
chr5 (43-108)||(20728620-20728686)
chr5 (39-118)||(1722937-1723017)
chr5 (45-108)||(18238306-18238370)
chr5 (1-129)||(30738181-30738312)
chr5 (36-196)||(5734940-5735102)
chr5 (7-111)||(30737829-30737934)
chr5 (1-73)||(35190346-35190418)
chr5 (43-108)||(32459459-32459525)
chr5 (7-73)||(35190032-35190098)
chr5 (84-195)||(6336146-6336259)
chr5 (39-118)||(35891223-35891303)
chr5 (39-89)||(13538575-13538626)
chr5 (7-89)||(38405147-38405230)
chr5 (48-154)||(6336298-6336406)
chr5 (86-134)||(18321223-18321271)
chr5 (44-111)||(32459822-32459890)
chr5 (40-89)||(26275971-26276021)
chr5 (48-89)||(38405518-38405560)
chr5 (99-198)||(14235568-14235669)
chr5 (81-118)||(14235590-14235627)
chr5 (84-191)||(32660266-32660375)
chr5 (79-116)||(33992675-33992712)
chr5 (137-212)||(35891263-35891339)
[»] scaffold0746 (2 HSPs)
scaffold0746 (8-198)||(21-213)
scaffold0746 (36-197)||(494-658)
[»] scaffold0374 (2 HSPs)
scaffold0374 (39-126)||(16187-16275)
scaffold0374 (40-126)||(16570-16657)
[»] chr3 (15 HSPs)
chr3 (1-108)||(24707499-24707607)
chr3 (39-156)||(21376609-21376728)
chr3 (1-102)||(31247224-31247326)
chr3 (1-75)||(14629342-14629415)
chr3 (40-108)||(31247607-31247676)
chr3 (1-154)||(35555572-35555727)
chr3 (6-57)||(3087185-3087234)
chr3 (39-118)||(4276217-4276297)
chr3 (48-126)||(54456685-54456764)
chr3 (8-74)||(21376950-21377016)
chr3 (45-101)||(19153917-19153974)
chr3 (78-129)||(3087093-3087143)
chr3 (44-101)||(21410273-21410332)
chr3 (51-135)||(35545168-35545254)
chr3 (137-194)||(3087086-3087143)
[»] scaffold0070 (2 HSPs)
scaffold0070 (1-89)||(28983-29072)
scaffold0070 (36-197)||(28545-28709)
[»] scaffold0027 (1 HSPs)
scaffold0027 (7-74)||(9832-9899)
[»] scaffold0041 (1 HSPs)
scaffold0041 (78-198)||(45205-45327)


Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 1286729 - 1286946
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaagacatatttaaaacttttaaaacttaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1286729 taacagctacatcagtatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaagacatatttaaaacttttaaaacttaa 1286828  T
Q  101 aggactaatttaaaaattctatcaaattataagatctatttaaaacttttgaaattaaatgactgacttaaaaattctatgaaactaaaaggaccaaact 200  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1286829 aggactaatttgaaaattctatcaaattataggatctatttaaaacttttgaaattaaatgactgacttaaaaattctatgaaactaaaaggaccaaact 1286928  T
Q  201 ttgtatttagccaggtct 218  Q
    ||||||||||||||||||    
T  1286929 ttgtatttagccaggtct 1286946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 39959118 - 39959328
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaactta 99  Q
    |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||||||||||| |||||||| |||||| || ||||| |||||||| |||||||    
T  39959118 taacggctgcatcagcatcaattaattattaactgacatcagcgttaacggtgaaatagtttatcaagtaaaagaacctatttgaaacttttgaaactta 39959217  T
Q  100 aaggactaatttaaaaattctatcaaattataag-atctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaa 197  Q
    || || ||| ||  ||||||| ||||| || ||| |||||||| |||||||| ||| |||||||||| | ||||||||||| | ||||||||||||||||    
T  39959218 aatgattaacttggaaattctgtcaaactaaaagaatctatttgaaacttttcaaatttaaatgactaatttaaaaattctgtcaaactaaaaggaccaa 39959317  T
Q  198 actttgtattt 208  Q
    || | ||||||    
T  39959318 acgtggtattt 39959328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 27995253 - 27995060
Alignment:
Q  9 acatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggacta 107  Q
    |||||| ||||||||||||||||||| || ||||||||||| |||||||| ||||||||||||||  || ||||| | |||||| |||||||||||| ||    
T  27995253 acatcaacatcaattaattattaactgacagcaggggtaacagtgaaatagtttatcaactaaaattacttatttgatacttttgaaacttaaaggatta 27995154  T
Q  108 atttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaac 199  Q
    | || | |||||| |||||||| || ||||||||| ||| |||||||| |||||  ||| |||| | |||||| | ||||||||||||||||||    
T  27995153 acttgagaattctgtcaaattaaaatgatctatttcaaatttttgaaacttaaaacactaacttgagaattctgtcaaactaaaaggaccaaac 27995060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 5559303 - 5559097
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactt-aaagga 104  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| ||| ||||| |||||||| |||||| ||||||    
T  5559303 ctacatcaacatcaattaattattaactgactgcaggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaaagga 5559204  T
Q  105 ctaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa--ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaactt 201  Q
    |||| ||   |||| ||||||| || || ||||||||| ||||||||||||  | ||| |||| ||||   |||||| | ||| |||||||||||||| |    
T  5559203 ctaacttgggaattttatcaaactaaaaggatctatttgaaacttttgaaacttaaaaggactaacttgggaattctgtcaaattaaaaggaccaaacgt 5559104  T
Q  202 tgtattt 208  Q
     ||||||    
T  5559103 ggtattt 5559097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 10620000 - 10619892
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||||| ||||||||||||  |||||||||||||  | |||||| ||||||||||||| |||||||||||||| ||| ||||| |||||||| |||||||    
T  10620000 taacagatacatcagcatctgttaattattaactggcagcagggataacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaactta 10619901  T
Q  100 aaggactaa 108  Q
    |||||||||    
T  10619900 aaggactaa 10619892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23679455 - 23679557
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||  |  ||||| |||||||| |||||||    
T  23679455 taacggctacatcagcatcaattaattattaactgacagcaagggtaacggtgaaatagtttatcaactaaaataatctattttaaacttttgaaactta 23679554  T
Q  100 aag 102  Q
    |||    
T  23679555 aag 23679557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 28256694 - 28256536
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcagggg-taacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaactt 98  Q
    |||| ||||||||| |||||| |||||||||||  ||  |||||| |||| |||||||| ||||||||||||||| || ||||| |||||||| ||| ||    
T  28256694 taactgctacatcaacatcaaataattattaacagacaacagggggtaacagtgaaatagtttatcaactaaaagaacctatttgaaacttttgaaattt 28256595  T
Q  99 aaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaatt 156  Q
    |||||||||| || | |||||| ||||| || || ||||| ||||||||||||||||||    
T  28256594 aaaggactaacttgagaattctgtcaaactaaaaggatctctttaaaacttttgaaatt 28256536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 35215248 - 35215377
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| ||||||||| ||| | ||||||||||||||||  || |||||||  ||||||| |||||||||||||| ||  ||||| ||||||||||||||||    
T  35215248 taacggctacatcaacatgagttaattattaactaacaacaagggtaacaatgaaatagtttatcaactaaaatgagttatttgaaacttttaaaactta 35215347  T
Q  100 aaggactaatttaaaaattctatcaaatta 129  Q
    || |||||||||  ||||||| ||||||||    
T  35215348 aaagactaatttggaaattctgtcaaatta 35215377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 42990700 - 42990599
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| ||||||| ||||||||||||||||||||| ||  || |||||||||| ||||| | |||||||||||| |||||| |||||||||||||||||||    
T  42990700 taacggctacattagcatcaattaattattaactgacaacatgggtaacggtaaaatagtgtatcaactaaaatgacataattaaaacttttaaaactta 42990601  T
Q  100 aa 101  Q
    ||    
T  42990600 aa 42990599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 4187663 - 4187763
Alignment:
Q  50 ggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaact 147  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||| |||||||||||| || |||||||| |||||||| || |||||| ||||||||    
T  4187663 ggtgaaatagtttatcaactaaaatgacctatttaaaacttttaaaatttaaaggactaacttgaaaattctgtcaaattaaaaggatctaattaaaact 4187762  T
Q  148 t 148  Q
    |    
T  4187763 t 4187763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 1286530 - 1286374
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaaga-catatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataag-atc 136  Q
    ||||||||||||||||  ||||||||||||||||||| | ||||| |||||||| ||||||||| |||||| || | |||||| ||||| || ||| | |    
T  1286530 gcaggggtaacggtga--taatttatcaactaaaagaacctatttgaaacttttgaaacttaaaagactaactttagaattctctcaaactaaaaggacc 1286433  T
Q  137 tatttaaaacttttgaaatt-aaatgactgacttaaaaattctatgaaactaaaaggac 194  Q
    || || |||||||||||||| |||  ||| | || |||||||||| |||||||||||||    
T  1286432 taattgaaacttttgaaatttaaaaaactaatttgaaaattctatcaaactaaaaggac 1286374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 33235481 - 33235584
Alignment:
Q  6 gctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaagga 104  Q
    |||||||||| |||||||||||||||||| ||  || ||||||| |||||||| |||||||||||||| ||| ||||| ||  |||| ||||||||||||    
T  33235481 gctacatcagtatcaattaattattaactgacaacaagggtaacagtgaaatagtttatcaactaaaatgacctatttgaagtttttgaaacttaaagga 33235580  T
Q  105 ctaa 108  Q
    ||||    
T  33235581 ctaa 33235584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 198
Target Start/End: Complemental strand, 35214968 - 35214806
Alignment:
Q  40 caggggtaacggtgaaataatttatcaact-aaaagacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatct 137  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||| ||| |||| ||||||||| |||||| || | |||||| ||||| || || || ||    
T  35214968 caggggtaacggtgaaatagtttatcaactaaaaagacctatttgaaatttttgaaacttaaaagactaacttgagaattctgtcaaactaaaaggacct 35214869  T
Q  138 atttaaaacttttgaaa-ttaaatg-actgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    | || |||||||||||| ||||| | ||| ||||| ||||||| | |||||||||||| ||||    
T  35214868 aattgaaacttttgaaacttaaaagaactaacttagaaattctgtcaaactaaaaggatcaaa 35214806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 191
Target Start/End: Original strand, 1349114 - 1349269
Alignment:
Q  42 ggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaat---ttaaaaattctatcaaattataa-gatc 136  Q
    ||||||||||||||||  |||||||||||||| ||| ||||| |||||||| |||||||||||||| ||   ||  ||||||| ||||| || || |||     
T  1349114 ggggtaacggtgaaatggtttatcaactaaaatgacctatttgaaacttttgaaacttaaaggacttataagttggaaattctgtcaaactaaaatgatt 1349213  T
Q  137 tatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaag 191  Q
    |||||||||||||||||| ||||| |||| ||||| ||||| | | ||||||||||    
T  1349214 tatttaaaacttttgaaacttaaaagactaacttagaaattatgtcaaactaaaag 1349269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 27995543 - 27995620
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaa 116  Q
    |||| |||||||||||||| ||||||||||||||| |  |||||||||||||| |||||||||||||||| |||||||    
T  27995543 caggagtaacggtgaaatagtttatcaactaaaaggatctatttaaaacttttgaaacttaaaggactaacttaaaaa 27995620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 29590795 - 29590711
Alignment:
Q  17 atcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaa 101  Q
    ||||||||||||||||||||| | |||| |||||||||||||  ||| ||||||||| |||||||||||||||||| |||||||||    
T  29590795 atcaattaattattaactaacagtaggg-taacggtgaaatagcttaccaactaaaatgacatatttaaaacttttgaaacttaaa 29590711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 8040093 - 8040153
Alignment:
Q  14 agcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag 74  Q
    ||||||||||||||||||||| || |||||||||||||||||||| || ||||||||||||    
T  8040093 agcatcaattaattattaactgacagcaggggtaacggtgaaatagttcatcaactaaaag 8040153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 79 - 193
Target Start/End: Complemental strand, 21413047 - 21412931
Alignment:
Q  79 atttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaatt 176  Q
    ||||||||||||| ||||||||| |||||| || | |||||| | ||| || || |||||||||||||||||||||| ||||| |||| |||| ||||||    
T  21413047 atttaaaacttttgaaacttaaaagactaacttgagaattctgtgaaactaaaatgatctatttaaaacttttgaaacttaaaggactaacttgaaaatt 21412948  T
Q  177 ctatgaaactaaaagga 193  Q
    || | ||||||||||||    
T  21412947 ctgtcaaactaaaagga 21412931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 28104394 - 28104330
Alignment:
Q  44 ggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggacta 107  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||    
T  28104394 ggtaacagtgaaataatttatcaactaaaaagacatatttaaaacttttgaaacttaaatgacta 28104330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 20183930 - 20183820
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataagatcta 138  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||| ||| |||| |||||||||||||||| ||   || ||||| |||||| | ||||||    
T  20183930 caggggtaacagtgaaataatttatcaactaaaatgacttatttgaaatttttgaaacttaaaggactaacttgggaactctattaaattaaaggatcta 20183831  T
Q  139 tttaaaacttt 149  Q
     || |||||||    
T  20183830 attgaaacttt 20183820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 8039815 - 8039747
Alignment:
Q  32 actaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||| ||||| |||||||| |||||||    
T  8039815 actaacagcaggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaactta 8039747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 20366482 - 20366662
Alignment:
Q  22 ttaattattaactaacggcaggggtaacggtgaa-ataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattc 119  Q
    |||||||||||||||  ||| ||||||||||    ||||||||||||||||||| |||||||| |||||||| |||| ||||||||||| ||   ||||     
T  20366482 ttaattattaactaatagcaagggtaacggtttccataatttatcaactaaaaggacatatttgaaacttttgaaacctaaaggactaacttgcgaattt 20366581  T
Q  120 tatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    | ||||| || || ||||| ||  |||||||||||| ||||| |||| ||||  ||||||| |  ||||||||||||||||    
T  20366582 tgtcaaactaaaaggatcttttggaaacttttgaaacttaaaggactaacttggaaattctgtttaactaaaaggaccaaa 20366662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 20101974 - 20101904
Alignment:
Q  48 acggtgaaataatttatcaactaaaagaca-tatttaaaacttttaaaacttaaaggactaatttaaaaat 117  Q
    ||||||||||| |||||||||||| |||   ||||||||||||||||||||||||||||||| || |||||    
T  20101974 acggtgaaatagtttatcaactaagagaatctatttaaaacttttaaaacttaaaggactaacttgaaaat 20101904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 21412988 - 21412870
Alignment:
Q  78 tatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaat 175  Q
    |||||||||||||| |||||||||||||||| || |||||||| ||||| || || |||||| || |||||||  ||| ||||| || | |||||| |||    
T  21412988 tatttaaaacttttgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggatctaattgaaactttcaaaacttaaaggattaacttaagaat 21412889  T
Q  176 tctatgaaactaaaaggac 194  Q
    ||| | |||||||||||||    
T  21412888 tctgtcaaactaaaaggac 21412870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 1441151 - 1441064
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttat---caactaaaa-gacatatttaaaacttt 90  Q
    |||||||| |||||||||||||||||||||  ||| ||||||| |||||||| |||||   ||||||||| ||| |||||||||||||    
T  1441151 ctacatcaacatcaattaattattaactaatagcatgggtaacagtgaaatagtttatccccaactaaaatgacctatttaaaacttt 1441064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 5805483 - 5805551
Alignment:
Q  6 gctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag 74  Q
    ||||||||||||||  ||||||||||||| |  |||| ||  |||||||||||||||||||||||||||    
T  5805483 gctacatcagcatcggttaattattaactgagagcagcggcgacggtgaaataatttatcaactaaaag 5805551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 34951377 - 34951309
Alignment:
Q  51 gtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaatt 118  Q
    |||||||| |||||||||||||| ||| ||||| |||||||| |||||||||||||||| |||| ||||    
T  34951377 gtgaaatagtttatcaactaaaatgacttatttgaaacttttgaaacttaaaggactaacttaagaatt 34951309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 42990559 - 42990520
Alignment:
Q  81 ttaaaacttttaaaacttaaaggactaatttaaaaattct 120  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  42990559 ttaaaactttcaaaacttaaaggactaatttaaaaattct 42990520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 212
Target Start/End: Complemental strand, 5805186 - 5805024
Alignment:
Q  53 gaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaactttt 150  Q
    |||||| ||||||||||||||| || || ||||||||||| |||||||||||| ||  || | |||||| ||||| || || || ||| || |||||||     
T  5805186 gaaatagtttatcaactaaaaggacctagttaaaacttttgaaacttaaaggaatagcttgagaattctgtcaaactaaaaggacctaattgaaactttc 5805087  T
Q  151 gaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtatttagcc 212  Q
    |||| ||||| |||| |||| | |||||| | |||||||||||||| ||  | ||||||||||    
T  5805086 gaaacttaaaggactaacttgagaattctgtcaaactaaaaggaccgaaagtggtatttagcc 5805024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 19925311 - 19925412
Alignment:
Q  50 ggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaact 147  Q
    ||||||||| |||||||||| |||| || ||||| |||||||| |||||||||||||||| ||   |||||| ||||| || || |||||| ||||||||    
T  19925311 ggtgaaatagtttatcaactgaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggatctaattaaaact 19925410  T
Q  148 tt 149  Q
    ||    
T  19925411 tt 19925412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 23150790 - 23150629
Alignment:
Q  50 ggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaact 147  Q
    ||||||||| |||||||||||||| ||  ||||| |||||||| ||||||||| ||||||| | | |||||| |||||||| || ||  || || |||||    
T  23150790 ggtgaaatagtttatcaactaaaatgatttatttgaaacttttgaaacttaaaagactaatctgagaattctgtcaaattaaaatgacttaattgaaact 23150691  T
Q  148 tttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtattt 208  Q
    ||  ||| ||||| |||| |||| | |||| | | |||||||||||||||||| | ||||||    
T  23150690 ttcaaaatttaaaggactaacttgagaattatgtcaaactaaaaggaccaaacatagtattt 23150629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 198
Target Start/End: Original strand, 34951462 - 34951586
Alignment:
Q  76 catatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaa 173  Q
    ||||||| | |||||| |||||||||||||| ||||| ||||| | ||||| || || |||||| || ||||||| |||| ||||| |||| |||| | |    
T  34951462 catattttatacttttgaaacttaaaggactgatttagaaattgtgtcaaactaaaaggatctaattgaaactttcgaaacttaaaggactaacttgata 34951561  T
Q  174 attctatgaaactaaaaggaccaaa 198  Q
    ||||| | ||||||||| |||||||    
T  34951562 attctgtcaaactaaaaagaccaaa 34951586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 28256908 - 28256959
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||||||    
T  28256908 gcagaggtagcggtgaaataatttatcaactaaaataacatatttaaaactt 28256959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 31893493 - 31893600
Alignment:
Q  93 aaacttaaaggactaatttaaaaattctatcaaattataag-atctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaa 190  Q
    |||||||||||||||| || | |||||| ||||| || ||| | ||| || |||||||| ||| ||||| |||| ||||| ||||||| | |||||||||    
T  31893493 aaacttaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaacttttaaaacttaaaggactaacttagaaattctgtcaaactaaaa 31893592  T
Q  191 ggaccaaa 198  Q
    ||||||||    
T  31893593 ggaccaaa 31893600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 33879505 - 33879640
Alignment:
Q  66 aactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatga 162  Q
    ||||||||| || ||||| |||||||| |||||||||||| ||| ||  ||||||| |||||||| || || ||| || ||||||| |||| ||||| ||    
T  33879505 aactaaaaggacctatttgaaacttttgaaacttaaaggattaacttggaaattctgtcaaattaaaaggacctaattgaaactttcgaaacttaaagga 33879604  T
Q  163 ctgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    || ||||   |||||| | |||||||||||||||||    
T  33879605 ctaacttgtgaattctgtcaaactaaaaggaccaaa 33879640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 28104633 - 28104679
Alignment:
Q  44 ggtaacggtgaaataatttatcaact-aaaagacatatttaaaactt 89  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  28104633 ggtaacggtgaaataatttatcaactgaaatgacttatttaaaactt 28104679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 31893544 - 31893586
Alignment:
Q  84 aaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||    
T  31893544 aaacttttaaaacttaaaggactaacttagaaattctgtcaaa 31893586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 198
Target Start/End: Complemental strand, 40904813 - 40904691
Alignment:
Q  78 tatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaat 175  Q
    ||||| |||||||||||||||||| ||||||||| |||||| | ||||| || || || ||| || |||||||| ||| ||||| |||| |||| | |||    
T  40904813 tatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaat 40904714  T
Q  176 tctatgaaactaaaaggaccaaa 198  Q
    | | | |||| ||||||||||||    
T  40904713 tatgtcaaaccaaaaggaccaaa 40904691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 1346624 - 1346480
Alignment:
Q  53 gaaataatttatcaactaaaagacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttg 151  Q
    |||||| ||||||||||||||||   | || |||||||| |||||||||||||||| ||  ||||| | ||||| || || ||| || || ||||||| |    
T  1346624 gaaatagtttatcaactaaaaga---acttgaaacttttgaaacttaaaggactaacttggaaattatgtcaaactaaaaggatttaattgaaactttcg 1346528  T
Q  152 aaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    ||| |||||  ||| |||||| |||||| | |||||||||||| ||||    
T  1346527 aaacttaaagcactaacttaagaattctgtcaaactaaaaggatcaaa 1346480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 33235195 - 33235126
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    ||||||||||| ||||||| |||||||||||||| ||| | ||| |||||||| ||| ||||||| ||||    
T  33235195 caggggtaacgatgaaatagtttatcaactaaaatgacctctttgaaacttttgaaatttaaaggtctaa 33235126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 36566321 - 36566268
Alignment:
Q  155 ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtattt 208  Q
    |||||||||| |||||| |||||| | |||||||||||||||||| | ||||||    
T  36566321 ttaaatgactaacttaagaattctgtcaaactaaaaggaccaaacgtggtattt 36566268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 10962938 - 10962783
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| ||||||||||||||| ||||||||||||| || ||| |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  10962938 taacggctacatcagcatcagttaattattaactgacagcaagggtaacggtaaaatagtttatcaactaaaatgacatatttgaaacttttaaaactta 10962839  T
Q  100 aaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa 154  Q
    ||||||||||||| ||||||||| ||| || || |||||| || ||||||| ||||    
T  10962838 aaggactaatttagaaattctattaaaataaaaggatctaattgaaactttcgaaa 10962783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 208
Target Start/End: Original strand, 11527979 - 11528179
Alignment:
Q  11 atcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaat 109  Q
    ||||||||||||||||||||||||||| ||| | ||||| |||||||| |||||||||||||| ||||||||| |||||||| |||||||||||| |||     
T  11527979 atcagcatcaattaattattaactaacagcatgagtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaag 11528078  T
Q  110 ttaaaaattctatcaaattataag-atctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtatt 207  Q
    ||   | || | ||||| || ||| || ||||| |||||||| ||| ||||| |||| |||| |||||||  | ||||| |||||||||||| |||||||    
T  11528079 ttgggacttatgtcaaactaaaagaatatatttgaaactttttaaacttaaaggactaacttgaaaattcggtcaaacttaaaggaccaaacgttgtatt 11528178  T
Q  208 t 208  Q
    |    
T  11528179 t 11528179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 198
Target Start/End: Original strand, 17180094 - 17180263
Alignment:
Q  32 actaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattat 130  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||  ||||| ||||||||||||||||||||||||| || |||||| | ||||| ||     
T  17180094 actaacagcaggggtaacggtgaaatagtttatcaactaaaatgatctatttgaaacttttaaaacttaaaggactaacttgaaaattatgtcaaactaa 17180193  T
Q  131 aa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    || ||  || |||||||||| |||| ||||| || | | ||||||||| ||| |||||||||||||||||    
T  17180194 aaggacataattaaaactttcgaaacttaaaggattaatttaaaaattatataaaactaaaaggaccaaa 17180263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 17179818 - 17179698
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggac 105  Q
    |||||||||||||| ||||||||||||| || ||||| ||||||||||||| | ||||||||||||| ||| ||||| ||| |||| ||| |||||||||    
T  17179818 ctacatcagcatcagttaattattaactgacagcaggagtaacggtgaaatgacttatcaactaaaaggacctatttgaaatttttgaaatttaaaggac 17179719  T
Q  106 taatttaaaaattctatcaaa 126  Q
    ||| || ||||||||||||||    
T  17179718 taacttgaaaattctatcaaa 17179698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 20575559 - 20575413
Alignment:
Q  54 aaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttg 151  Q
    ||||| |||||||||| ||| ||| ||||| ||||||||||||||||||||||||| ||  ||||||||||||| || || || |||||||||||||| |    
T  20575559 aaatagtttatcaactgaaatgacctatttgaaacttttaaaacttaaaggactaacttggaaattctatcaaactaaaaggacctatttaaaactttcg 20575460  T
Q  152 aaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaa 197  Q
    ||| ||||| |||| ||||  ||||||||| ||||||||||||||||    
T  20575459 aaacttaaaggactaacttggaaattctatcaaactaaaaggaccaa 20575413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10862511 - 10862612
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| ||||||||||||| | ||||||||||||| || |||||||||||||||||||| |||||||||||||| ||| ||||| |||||||| ||| |||    
T  10862511 taacggctacatcagcattagttaattattaactgacagcaggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaattta 10862610  T
Q  100 aa 101  Q
    ||    
T  10862611 aa 10862612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 17131715 - 17131620
Alignment:
Q  8 tacatcagcatcaattaattattaactaacggcag-gggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaa 101  Q
    ||||||| |||||||||| || ||||| ||  ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  17131715 tacatcaacatcaattaaataataactgacaacagagggtaacagtgaaataatttatcaactaaaatgacatatttaaaacttttgaaacttaaa 17131620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 10407410 - 10407347
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaag 102  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  10407410 caggggtaacagtgaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaag 10407347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 32417604 - 32417469
Alignment:
Q  66 aactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatga 162  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||| || |||||| | ||||| || || ||  || |||||||||| |||| ||||| ||    
T  32417604 aactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaactaaaatgacataattaaaactttcgaaacttaaagga 32417505  T
Q  163 ctgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    || |||| |||||||| | |||||||||||||||||    
T  32417504 ctaacttgaaaattctgtcaaactaaaaggaccaaa 32417469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 32423445 - 32423310
Alignment:
Q  66 aactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatga 162  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||| || |||||| | ||||| || || ||  || |||||||||| |||| ||||| ||    
T  32423445 aactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaactaaaatgacataattaaaactttcgaaacttaaagga 32423346  T
Q  163 ctgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    || |||| |||||||| | |||||||||||||||||    
T  32423345 ctaacttgaaaattctgtcaaactaaaaggaccaaa 32423310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2839985 - 2840074
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    |||| |||||||||  |||||||||||||||||||||  ||||  ||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  2839985 taacggctacatcaatatcaattaattattaactaacaacaggtataacggtgaaatagtttatcaactaaaatgacctatttgaaactt 2840074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 190
Target Start/End: Complemental strand, 32417649 - 32417537
Alignment:
Q  80 tttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattc 177  Q
    ||||||| |||| |||||||||||||||||||  ||||||| ||||| || || ||  |||||||||||||||||| |||||||||| |||| ||||||     
T  32417649 tttaaaaattttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattt 32417550  T
Q  178 tatgaaactaaaa 190  Q
    | | |||||||||    
T  32417549 tgtcaaactaaaa 32417537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 190
Target Start/End: Complemental strand, 32423490 - 32423378
Alignment:
Q  80 tttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattc 177  Q
    ||||||| |||| |||||||||||||||||||  ||||||| ||||| || || ||  |||||||||||||||||| |||||||||| |||| ||||||     
T  32423490 tttaaaaattttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattt 32423391  T
Q  178 tatgaaactaaaa 190  Q
    | | |||||||||    
T  32423390 tgtcaaactaaaa 32423378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 24139471 - 24139558
Alignment:
Q  40 caggggtaacggtgaaataatttatcaact-aaaagacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||||| || ||||||||||||||||||| ||||||| ||||| ||| |||| ||||||||||||||||  | | ||||||||||||    
T  24139471 caggggttacagtgaaataatttatcaactaaaaagacttatttgaaatttttgaaacttaaaggactaacctgataattctatcaaa 24139558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 17132149 - 17132266
Alignment:
Q  8 tacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaa-aagacatatttaaaacttttaaaacttaaaggact 106  Q
    ||||||||||||||||||||| |||||||   |||| |||||||| ||||| ||||| |||||| | ||| ||||| || ||||| |||||||||||| |    
T  17132149 tacatcagcatcaattaattaataactaa---caggagtaacggtaaaatagtttataaactaatatgacttatttgaatcttttgaaacttaaaggatt 17132245  T
Q  107 aatttaaaaattctatcaaat 127  Q
    || || | |||||| ||||||    
T  17132246 aacttgagaattctgtcaaat 17132266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 9902060 - 9901991
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    ||||||||||| ||||||| |||||||||||||| ||| |||||||||||||| ||||| |||| |||||    
T  9902060 caggggtaacgatgaaatagtttatcaactaaaatgacctatttaaaacttttgaaactaaaagcactaa 9901991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9946639 - 9946711
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag 74  Q
    |||| |||| ||||| |||||||||| ||||||  || |||||||||||||||||||| |||||||||||||||    
T  9946639 taacggctatatcagaatcaattaat-attaaccgacagcaggggtaacggtgaaatagtttatcaactaaaag 9946711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24139190 - 24139100
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcagggg-taacggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    |||||||||||||||||||  ||||||||||||| |    ||||| ||| |||||||||||||||||||||||| ||||| ||| ||||||    
T  24139190 taacagctacatcagcatctgttaattattaactgatattagggggtaatggtgaaataatttatcaactaaaatgacatttttgaaactt 24139100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 10407709 - 10407761
Alignment:
Q  44 ggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaa 95  Q
    |||||| |||||||| |||||||||||||| ||||||||| ||||||||||||    
T  10407709 ggtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttaaaa 10407761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 11527689 - 11527638
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  11527689 gcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaactt 11527638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 32417684 - 32417755
Alignment:
Q  48 acggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaatt 118  Q
    ||||||||||| |||||||||||||| ||| ||||| |||||| | ||||||||| |||||| ||| |||||    
T  32417684 acggtgaaatagtttatcaactaaaaggacctatttgaaacttctgaaacttaaatgactaacttagaaatt 32417755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 32423525 - 32423596
Alignment:
Q  48 acggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaatt 118  Q
    ||||||||||| |||||||||||||| ||| ||||| |||||| | ||||||||| |||||| ||| |||||    
T  32423525 acggtgaaatagtttatcaactaaaaggacctatttgaaacttctgaaacttaaatgactaacttagaaatt 32423596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 2840110 - 2840190
Alignment:
Q  133 gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtatttagcc 212  Q
    ||||||||  |||||||||||| |||||||||| |||| | |||| | | |||||||||||||||||| |  |||||||||    
T  2840110 gatctattcgaaacttttgaaacttaaatgactaacttgagaattatgttaaactaaaaggaccaaacgtgatatttagcc 2840190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 9276933 - 9277109
Alignment:
Q  16 catcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaagacatatttaaaacttttaaaacttaaaggactaatttaaaa 115  Q
    ||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||| ||  ||    
T  9276933 catcaattaattattaactgacagcaagggtaacggtgaaatagtttatcaactaaaagacctatttgaaacttttgaaacttaaaggactaacttggaa 9277032  T
Q  116 attctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaa 190  Q
    ||||||||||| || || |||||| || ||||||| |||| ||||| |||| ||||   |||||| | |||||||||    
T  9277033 attctatcaaactaaaaggatctaattgaaactttcgaaacttaaaagactaacttgggaattctgtcaaactaaaa 9277109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 31169426 - 31169618
Alignment:
Q  9 acatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggacta 107  Q
    |||||||||||| ||||||||||||| ||  || |||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  31169426 acatcagcatcagttaattattaactgacatcacgggtaacggtgaaatattttatcaactaaaatgacatatttgaaacttttaaaacttaaaggacta 31169525  T
Q  108 atttaaaaattctatcaaattataa-gatctatttaaaacttttgaaattaaatgactgacttaaaaattctatgaaactaaaaggaccaaac 199  Q
    |||| | ||||   ||||| || || ||||||||| |||||||  || ||||| |||| |||| | |||| | | ||||||||| ||||||||    
T  31169526 atttgagaatttcgtcaaactaaaatgatctatttgaaactttaaaacttaaaggactaacttgagaattttgtcaaactaaaatgaccaaac 31169618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 25737296 - 25737103
Alignment:
Q  8 tacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggact 106  Q
    ||||||| ||||||||||||||||||| || ||||| |||||| ||||||| |||||||| ||||| ||||||| | |||||||| ||| ||||||||||    
T  25737296 tacatcaacatcaattaattattaactgacagcaggtgtaacgatgaaatagtttatcaagtaaaatgacatatgtgaaacttttgaaatttaaaggact 25737197  T
Q  107 aatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    || |||  |||||  ||||| || || ||||||||| |||||||||||| ||||| |||| |||| |||||| | | |||||||||||||||||    
T  25737196 aacttaggaattcggtcaaactaaaaggatctatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggaccaaa 25737103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 212
Target Start/End: Original strand, 30576632 - 30576807
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatct 137  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| ||   |||||| ||||| || || || ||    
T  30576632 caggggtaacggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacct 30576731  T
Q  138 atttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtatttagcc 212  Q
    | || |||||||||||| ||| | |||| |||| |||||||| | |||||||||||| ||||| | ||||||||||    
T  30576732 aattgaaacttttgaaacttagaagactaacttgaaaattctgtcaaactaaaaggatcaaacgtagtatttagcc 30576807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 8714286 - 8714488
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacg-gcaggggtaacggtgaaataatttatcaact-aaaagacatatttaaaacttttaaaactt 98  Q
    |||| ||||||||| ||||||||||||||| ||| ||  |||| |||||| |||||||| |||||||||| ||||||| |||||||||||||  ||||||    
T  8714286 taacggctacatcaacatcaattaattatttactgactagcagaggtaacagtgaaatagtttatcaactaaaaagacctatttaaaactttagaaactt 8714385  T
Q  99 aaaggactaatttaaaaattctatcaaattataag-atctatttaaaacttttgaa-attaaatgactgacttaaaaattctatgaaactaaaaggacca 196  Q
    |||  ||||| ||   |||||||||||| || ||| |||||||| |||||||||||  ||||| |||| ||||  ||||||||| |||||||||||| ||    
T  8714386 aaaaaactaacttgcgaattctatcaaactaaaagaatctatttgaaacttttgaatcttaaaggactaacttggaaattctatcaaactaaaaggatca 8714485  T
Q  197 aac 199  Q
    |||    
T  8714486 aac 8714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 44040954 - 44040860
Alignment:
Q  8 tacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaa 101  Q
    ||||||| ||||| |||||||||||||||| |||||| |||| |||||||| |||||||||||||| ||| |||||||||||||| |||||||||    
T  44040954 tacatcatcatcagttaattattaactaacagcagggataacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaa 44040860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23553554 - 23553453
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| ||||||||| ||||| ||||||||||||| || |||||||||||||||||||| |||||||||||||| ||| ||||| |||||||| ||| |||    
T  23553554 taacggctacatcaacatcagttaattattaactgacagcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaattta 23553455  T
Q  100 aa 101  Q
    ||    
T  23553454 aa 23553453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 25730091 - 25730252
Alignment:
Q  36 acggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-g 133  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||| |||||||| ||| |||||||||||| || | |||||| |||||||| || |    
T  25730091 acggcaggggtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaatg 25730190  T
Q  134 atct-atttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaagga 193  Q
    | || |||| |||||||  ||| ||||| |||| ||||  ||||||||| ||||||||||||    
T  25730191 acctaatttgaaactttcaaaacttaaaggactaacttggaaattctatcaaactaaaagga 25730252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4613939 - 4613831
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaactta 99  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||||| || |||||||||| ||||| ||||||||| |  ||||| |||||||| |||||||    
T  4613939 taacggctgcatcagcatcagttaattattaactgacggcagggttagcggtgaaatagtttataaactaaaagaatctatttgaaacttttgaaactta 4613840  T
Q  100 aaggactaa 108  Q
    |||||||||    
T  4613839 aaggactaa 4613831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 34686875 - 34686960
Alignment:
Q  45 gtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaatta 129  Q
    |||||||||||||| ||||||||||||||| || |||||||||||||||||| |||||||||||| || | |||||| ||||||||    
T  34686875 gtaacggtgaaatagtttatcaactaaaaggacctatttaaaacttttaaaatttaaaggactaacttgataattctgtcaaatta 34686960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 208
Target Start/End: Original strand, 39701339 - 39701536
Alignment:
Q  14 agcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaattta 112  Q
    ||||||| ||||||||||||| |  ||||||||||| ||||| || |||||||||||||| ||| ||||| ||| |||| ||||||||| ||||||| |     
T  39701339 agcatcagttaattattaactgatagcaggggtaacagtgaagtagtttatcaactaaaaggacctatttgaaagttttgaaacttaaatgactaatctg 39701438  T
Q  113 aaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtattt 208  Q
      |||||||||||| || || ||  || || |||||||||||| |||||  ||| |||| | |||||| | |||||||||||||||||| | ||||||    
T  39701439 ggaattctatcaaactaaaaggacttaattgaaacttttgaaacttaaagaactaacttgagaattctgtcaaactaaaaggaccaaacgtggtattt 39701536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 6235925 - 6235857
Alignment:
Q  5 agctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa 73  Q
    |||||||||||||||||||||||||||||| || |||| ||||| ||||||||| ||||||||||||||    
T  6235925 agctacatcagcatcaattaattattaactgacagcagaggtaaaggtgaaatagtttatcaactaaaa 6235857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 191
Target Start/End: Original strand, 25737577 - 25737736
Alignment:
Q  36 acggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaatt-ataag 133  Q
    |||||||||||||| |||||||| |||||||||||||| || |||||| |||||||| ||| |||||||||||| || | |||||| ||||||| | |||    
T  25737577 acggcaggggtaacagtgaaatagtttatcaactaaaatgaaatatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaag 25737676  T
Q  134 atct-atttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaag 191  Q
    | || |||| |||||||  ||| ||||| |||| ||||  ||||||||| ||||||||||    
T  25737677 acctaatttgaaactttcaaaacttaaaggactaacttggaaattctatcaaactaaaag 25737736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 39701046 - 39700887
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatc 136  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||| ||| |||  |||| | ||||| || || ||      
T  39701046 gcaggggtaacggtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttaggaattttgtcaaactaaaaggaca 39700947  T
Q  137 tatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggacc 195  Q
    || || |||||||| ||| ||||| |||| |||||| |||| | | ||||||||||||||    
T  39700946 taattgaaacttttaaaacttaaaggactaacttaagaattttgtcaaactaaaaggacc 39700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 5358744 - 5358656
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||||||||| | |||||| ||||||||||||||| || |||||||||||||| |||||| ||||||||| || |||||||| |||||    
T  5358744 gcaggggtaacagcgaaatagtttatcaactaaaaggacctatttaaaacttttgaaacttgaaggactaacttgaaaattctgtcaaa 5358656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 35433994 - 35433907
Alignment:
Q  43 gggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaatta 129  Q
    ||||||| ||||||||||||||||||||||| ||  |||||||||||||| ||||||||| |||||| ||   |||||||||||||||    
T  35433994 gggtaacagtgaaataatttatcaactaaaaagatctatttaaaacttttgaaacttaaatgactaacttgtgaattctatcaaatta 35433907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 13771519 - 13771431
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaagaca-tatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||||| || ||||||||| ||||||||||||||||   ||||| |||||||||||||||||| |||||| || |||||||| |||||    
T  13771519 gcaggggaaatggtgaaatagtttatcaactaaaagaatctatttgaaacttttaaaacttaaatgactaacttgaaaattctgtcaaa 13771431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 197
Target Start/End: Complemental strand, 36360053 - 36359901
Alignment:
Q  48 acggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa-ttataagatctatttaaaa 145  Q
    ||||| ||||| |||||||||||||| ||| ||||| ||||||||||||||||||||||||| ||   |||||| ||||| | | || | ||| || |||    
T  36360053 acggtaaaatagtttatcaactaaaatgacctatttgaaacttttaaaacttaaaggactaacttgggaattctgtcaaactaaaaatacctaattgaaa 36359954  T
Q  146 cttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaa 197  Q
    |||| |||| ||||| |||| ||||  ||||||| | ||||||||||||||||    
T  36359953 ctttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggaccaa 36359901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 16208674 - 16208745
Alignment:
Q  52 tgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctat 122  Q
    ||||||| |||||||||||||| ||||||||| |||||||| ||||| |||||||||| || ||||||||||    
T  16208674 tgaaatagtttatcaactaaaaggacatatttgaaacttttgaaactcaaaggactaacttgaaaattctat 16208745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 40552961 - 40552751
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaactta 99  Q
    |||| |||| ||||||||||||||||||||||||    ||||||||||| |||||||| |||||||| | |||| || ||||| ||| |||| ||| |||    
T  40552961 taacggctaaatcagcatcaattaattattaactggtagcaggggtaacagtgaaatattttatcaatttaaagaacctatttgaaatttttgaaattta 40552862  T
Q  100 aaggactaatttaaaaattctatcaaattataagatc-tatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaa 197  Q
    || | |||| || |||||| | ||||| || || ||| || || |||||||  ||| |||||||| | |||| |||||||| | ||||||||| ||| ||    
T  40552861 aatggctaacttgaaaattttgtcaaactaaaatatcttaattgaaactttcaaaatttaaatgattaacttgaaaattctgtcaaactaaaacgacgaa 40552762  T
Q  198 actttgtattt 208  Q
    || | ||||||    
T  40552761 acgtggtattt 40552751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 9276639 - 9276550
Alignment:
Q  44 ggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa 132  Q
    |||||| |||||||| ||||||||||||||| || ||||| |||||||||||||||||  |||||| || | |||||| ||||| |||||    
T  9276639 ggtaacagtgaaatagtttatcaactaaaaggacctatttgaaacttttaaaacttaactgactaacttgagaattctgtcaaactataa 9276550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 212
Target Start/End: Complemental strand, 8714003 - 8713831
Alignment:
Q  43 gggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataag-atctatt 140  Q
    |||||||||||||| |||||||||||||||| ||  ||||| ||| |||| ||||||||| |||||| ||   |||| | ||||| || ||| || || |    
T  8714003 gggtaacggtgaaacaatttatcaactaaaatgatctatttgaaatttttgaaacttaaaagactaacttgtgaattttgtcaaactaaaagaatttaat 8713904  T
Q  141 taaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtatttagcc 212  Q
    | |||||||||||| ||||| |||| |||| | |||| | | |||||||||||||||||  | ||||||||||    
T  8713903 tgaaacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggaccaaaagtggtatttagcc 8713831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 35433964 - 35433896
Alignment:
Q  131 aagatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    |||||||||||||||||||||||| |||||||||| ||||   |||||||| ||| |||||||||||||    
T  35433964 aagatctatttaaaacttttgaaacttaaatgactaacttgtgaattctatcaaattaaaaggaccaaa 35433896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40553181 - 40553253
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa 73  Q
    |||| |||| |||| ||||||||||||||||||| ||  || |||||||||||||||| |||||||| |||||    
T  40553181 taacggctatatcaacatcaattaattattaactgacaccaagggtaacggtgaaatagtttatcaagtaaaa 40553253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 35434313 - 35434367
Alignment:
Q  51 gtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaagga 104  Q
    |||||||| |||||||||||||| ||||||||| |||||||| ||||||||||||    
T  35434313 gtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaagga 35434367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 13771843 - 13771908
Alignment:
Q  44 ggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    |||||| |||||||  |||||||| ||||| ||||||||| |||||||| ||||||||||||||||    
T  13771843 ggtaacagtgaaatggtttatcaaataaaatgacatatttgaaacttttgaaacttaaaggactaa 13771908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 14871060 - 14870959
Alignment:
Q  78 tatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaatt-ataagatctatttaaaacttttgaaattaaatgactgacttaaaaatt 176  Q
    ||||| |||||||||||| |||||||||||| |||  |||||| ||||||| | | ||| ||||| || ||||||||||| || |||| |||| ||||||    
T  14871060 tatttgaaacttttaaaatttaaaggactaacttatgaattctgtcaaattaagaggatttatttgaatcttttgaaatttaaagactaacttgaaaatt 14870961  T
Q  177 ct 178  Q
    ||    
T  14870960 ct 14870959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 29794238 - 29794299
Alignment:
Q  48 acggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    |||||||||||||||||||||||||| ||  ||||| |||||||| ||||||||| ||||||    
T  29794238 acggtgaaataatttatcaactaaaaggatctatttgaaacttttgaaacttaaaagactaa 29794299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 9770768 - 9770827
Alignment:
Q  50 ggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    ||||||||| |||||||||||||| ||| ||||| |||||||| ||| ||||||||||||    
T  9770768 ggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaaattaaaggactaa 9770827  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 43423091 - 43423225
Alignment:
Q  66 aactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataagatctatttaaaacttttgaaa-ttaaatgac 163  Q
    |||||||| ||| ||||| |||||||| |||||||||||| ||| || | |||||||| ||| || ||||  || || ||||||| |||| |||||| ||    
T  43423091 aactaaaatgacctatttgaaacttttgaaacttaaaggagtaaattgagaattctatgaaactaaaagacttaattgaaactttcgaaacttaaataac 43423190  T
Q  164 tgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    | |||||  |||| | | |||||||||||||||||    
T  43423191 taacttaggaattatgtcaaactaaaaggaccaaa 43423225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 5359042 - 5359075
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa 73  Q
    |||| |||||||||||||||||||||||||||||    
T  5359042 caggagtaacggtgaaataatttatcaactaaaa 5359075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 34686560 - 34686499
Alignment:
Q  51 gtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaattt 111  Q
    |||||||| | |||||||||||| ||  |||||||||||||||||||||||| || ||||||    
T  34686560 gtgaaatagtctatcaactaaaaagatctatttaaaacttttaaaacttaaatgattaattt 34686499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 198
Target Start/End: Complemental strand, 45017899 - 45017746
Alignment:
Q  48 acggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaa 145  Q
    ||||||||||| |||||||| ||||| ||| ||||| ||| |||| || ||||||||||||||||   |||||| | ||| || || ||  || || |||    
T  45017899 acggtgaaatagtttatcaattaaaatgacttatttgaaatttttgaatcttaaaggactaatttgggaattctgttaaactaaaatgacataattgaaa 45017800  T
Q  146 cttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    |||| |||| ||||| |||| ||||   |||||||| |||||||||||||||||    
T  45017799 ctttcgaaacttaaaggactaacttgggaattctatcaaactaaaaggaccaaa 45017746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 23553839 - 23553927
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaa-aagacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||||||||| |||||||||||||| |||||| | ||  ||||| |||||||| |||||| | | ||||| || | ||||||||||||    
T  23553839 gcaggggtaacagtgaaataatttattaactaacatgatctatttgaaacttttgaaacttgaggaactaacttgagaattctatcaaa 23553927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 44041263 - 44041347
Alignment:
Q  43 gggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    |||||| ||||||||| |||||||||||||| ||| ||||| ||| |||| |||||| || |||||| |||  |||||| |||||    
T  44041263 gggtaatggtgaaatagtttatcaactaaaatgacttatttgaaatttttgaaactttaaagactaacttaggaattctgtcaaa 44041347  T

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Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 31229449 - 31229329
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggac 105  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||||| || ||||| |||||||| ||||||||| |||    
T  31229449 ctacatcagcatcaattaattattaactgacagcagaggtaacggtgaaatagtttatcaactaaaagaacctatttgaaacttttgaaacttaaatgac 31229350  T
Q  106 taatttaaaaattctatcaaa 126  Q
    ||| || | ||||||||||||    
T  31229349 taacttgagaattctatcaaa 31229329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 52567877 - 52567757
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggac 105  Q
    |||||||| ||||||||||||||||||| || ||||| ||||| |||||||| |||||||||||||| ||| |||||||||||||| ||||||||| |||    
T  52567877 ctacatcaacatcaattaattattaactgacagcaggagtaacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaatgac 52567778  T
Q  106 taatttaaaaattctatcaaa 126  Q
    ||| |||| |||||| |||||    
T  52567777 taacttaagaattctgtcaaa 52567757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 5387551 - 5387693
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggac 105  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||| |||||||||||| ||||||| |    
T  5387551 ctacatcaacatcagttaattattaactaacagcaggggtaacggtgaaataatttatcaagtgaaagtacatatttgaaacttttaaaatttaaaggtc 5387650  T
Q  106 taatttaaaaattctatcaaattataagatctatttaaaactt 148  Q
    | | |||| |||| | ||||| || || || ||||| ||||||    
T  5387651 ttacttaagaattttgtcaaactaaaaaatttatttgaaactt 5387693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 52181909 - 52181807
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggac 105  Q
    |||||||| ||||||||||||||||| | || |||| ||||||||||||||| |||||||| ||||| ||||| ||| |||||||| |||||||||||||    
T  52181909 ctacatcaacatcaattaattattaattcacagcagcggtaacggtgaaatagtttatcaattaaaatgacatgtttgaaacttttgaaacttaaaggac 52181810  T
Q  106 taa 108  Q
    |||    
T  52181809 taa 52181807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 2508670 - 2508748
Alignment:
Q  52 tgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaatta 129  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||| ||||||||| ||||||||||    
T  2508670 tgaaataatttatcaactaaaaggacatatttaaaacttttgaaatttaaaggagtaacttaaaaattttatcaaatta 2508748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 156
Target Start/End: Original strand, 52568159 - 52568276
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaagacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatcta 138  Q
    ||||||||||||||||||| ||||||||||||| ||  ||||| |||||||| |||||||||||||| | || | |||||||||||| || || || |||    
T  52568159 caggggtaacggtgaaatagtttatcaactaaaggatctatttgaaacttttgaaacttaaaggactgacttgagaattctatcaaactaaaatgaccta 52568258  T
Q  139 tttaaaacttttgaaatt 156  Q
     || ||||||||||||||    
T  52568259 attgaaacttttgaaatt 52568276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 44916000 - 44915933
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaact-aaaagacatatttaaaacttttaaaacttaaaggac 105  Q
    ||||||||||| ||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||    
T  44916000 gcaggggtaacagtgaaataatttatcaactaaaaagacctttttaaaacttttgaaacttaaaggac 44915933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 23085220 - 23085330
Alignment:
Q  89 tttaaaacttaaaggactaatttaaaaattctatcaaattataaga-tctatttaaaacttttgaaattaaatgactgacttaaaaattctatgaaacta 187  Q
    ||||||| ||||||||||||||| |||||||||| ||| || |||| |||| || |||||||||||| | || |||| |||||||| |||| | ||||||    
T  23085220 tttaaaatttaaaggactaatttgaaaattctataaaactaaaagattctaattgaaacttttgaaacttaaagactaacttaaaatttctgtcaaacta 23085319  T
Q  188 aaaggaccaaa 198  Q
    |||| ||||||    
T  23085320 aaagaaccaaa 23085330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19631958 - 19631869
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    |||| ||||||||||||||||||||||||||| | ||  || |||||||||| ||||| |||||||||||||| ||| ||||| ||||||    
T  19631958 taacggctacatcagcatcaattaattattaaatgacaacatgggtaacggtaaaatagtttatcaactaaaatgacctatttgaaactt 19631869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 19632212 - 19632295
Alignment:
Q  43 gggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||||| ||||| || |||||||||||||| |||||||||||||||||| ||||||||| ||||||||| | |||||| |||||    
T  19632212 gggtaacagtgaagtagtttatcaactaaaatgacatatttaaaacttttgaaacttaaa-gactaatttgagaattctgtcaaa 19632295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 52567806 - 52567742
Alignment:
Q  136 ctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaac 199  Q
    ||||||||||||||||||| |||||||||| |||||| |||||| | ||||||||||||||||||    
T  52567806 ctatttaaaacttttgaaacttaaatgactaacttaagaattctgtcaaactaaaaggaccaaac 52567742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 36890618 - 36890697
Alignment:
Q  48 acggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||||||||| |||||||||||||| ||| ||||  |||||||||||||||||| || ||| ||||||||||| |||||    
T  36890618 acggtgaaatagtttatcaactaaaatgacctattataaacttttaaaacttaaatgattaacttaaaaattctgtcaaa 36890697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 193
Target Start/End: Complemental strand, 5387288 - 5387131
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaact-aaaagacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatc 136  Q
    |||||||||||||||||||  |||||||||| ||||||  ||||| |||||||| ||||||||||| |||| ||   |||||| ||||| || || |||     
T  5387288 gcaggggtaacggtgaaattgtttatcaactaaaaagatctatttgaaacttttgaaacttaaagggctaacttgggaattctgtcaaactaaaatgata 5387189  T
Q  137 tatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaagga 193  Q
    || || |||||||| ||| ||||| |||| ||||| ||||||  | ||||||||||||    
T  5387188 taattgaaacttttaaaacttaaaggactaacttagaaattcagtcaaactaaaagga 5387131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 8408826 - 8408910
Alignment:
Q  43 gggtaacggtgaaataatttatcaactaa-aagacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||| |||||||||| |||||||||||| | ||| ||||| |||||||| ||||||||| |||||| || |||||||| |||||    
T  8408826 gggtagcggtgaaatagtttatcaactaagatgacctatttgaaacttttgaaacttaaatgactaacttgaaaattctgtcaaa 8408910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 30543077 - 30543133
Alignment:
Q  17 atcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa 73  Q
    |||||||||||||||||| ||  ||||||||||||||||||| |||||||| |||||    
T  30543077 atcaattaattattaactgacaacaggggtaacggtgaaatagtttatcaattaaaa 30543133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 42116062 - 42116110
Alignment:
Q  70 aaaagacatatttaaaacttttaaaacttaaaggactaatttaaaaatt 118  Q
    ||||||| |||||||||||||| |||||||||||||||| |||||||||    
T  42116062 aaaagacctatttaaaacttttgaaacttaaaggactaacttaaaaatt 42116110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 22025206 - 22025127
Alignment:
Q  48 acggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||||||||| ||||||||||||||| || ||||| |||||||| || ||||| ||||||| |||| |||||| |||||    
T  22025206 acggtgaaatagtttatcaactaaaagaacctatttgaaactttttaatcttaacggactaacttaagaattctgtcaaa 22025127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 26329921 - 26330066
Alignment:
Q  51 gtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaactt 148  Q
    |||||||| |||||||||||||| ||| ||||| |||||||| ||||||||| |||||| ||   |||| | ||||| || || || |||||| ||||||    
T  26329921 gtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaacttaaatgactaacttgggaattatgtcaaactaaaaggacctatttgaaactt 26330020  T
Q  149 ttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaagga 193  Q
    |||||| ||||| |||| ||||   |||||| | ||||||||||||    
T  26330021 ttgaaacttaaaggactaacttgggaattctgtaaaactaaaagga 26330066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 42116064 - 42116132
Alignment:
Q  131 aagatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    |||| ||||||||||||||||||| ||||| |||| ||||||||||| | | ||||||||| |||||||    
T  42116064 aagacctatttaaaacttttgaaacttaaaggactaacttaaaaattttgtcaaactaaaatgaccaaa 42116132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 35046544 - 35046473
Alignment:
Q  84 aaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa 154  Q
    |||||||| ||||||||||||||||||||  |||||| ||||| || || |||||| |||||||||| ||||    
T  35046544 aaacttttgaaacttaaaggactaatttaggaattctgtcaaactaaaaggatctaattaaaactttcgaaa 35046473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 2788964 - 2789114
Alignment:
Q  66 aactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatga 162  Q
    |||||||| ||| ||||| |||||||| |||||||||||||||| || |||||||| ||||| || || || ||| || ||||||   ||| ||||| ||    
T  2788964 aactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgaaaattctgtcaaactaaaatgacctaattgaaacttccaaaacttaaagga 2789063  T
Q  163 ctgacttaaaaattctatgaaactaaaaggaccaaactttgtatttagcca 213  Q
    || | ||||||||| | | |||||||||| | |||| ||| ||||||||||    
T  2789064 ctaatttaaaaattttgtcaaactaaaagtaacaaaatttatatttagcca 2789114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 8408497 - 8408436
Alignment:
Q  46 taacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggact 106  Q
    |||||||||||||  ||||||||||||| ||| ||||| |||||||| ||||||||| ||||    
T  8408497 taacggtgaaatagcttatcaactaaaatgacttatttgaaacttttcaaacttaaaagact 8408436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19681388 - 19681317
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa 73  Q
    |||| ||||||||| ||||| | |||||| |||| |  |||||||||| ||||||||| ||||||||||||||    
T  19681388 taacggctacatcaacatcagtcaattat-aactgatagcaggggtaatggtgaaatagtttatcaactaaaa 19681317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 11871681 - 11871783
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggac 105  Q
    |||||||||||||| |||||||||||||    |||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  11871681 ctacatcagcatcagttaattattaactggtagcaggggtaacggttaaataatttatcaactaaaatgacatatttaaaacttttgaaacttaaaggac 11871780  T
Q  106 taa 108  Q
    |||    
T  11871781 taa 11871783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15506429 - 15506530
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| ||||||||| ||||| ||||||||||| | || |||| | ||| ||||||||| |||||||||||||| |||||||||||||||||||||| |||    
T  15506429 taacggctacatcaacatcagttaattattaattgacagcagagataatggtgaaatagtttatcaactaaaaggacatatttaaaacttttaaaattta 15506528  T
Q  100 aa 101  Q
    ||    
T  15506529 aa 15506530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 20535642 - 20535544
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactt 98  Q
    |||| ||||||||| ||||| ||||||||||||| || |||||| ||||||||||||| |||||||||||||| ||| ||||| |||| ||| ||||||    
T  20535642 taacggctacatcaacatcagttaattattaactgacagcagggataacggtgaaatagtttatcaactaaaatgacctatttgaaacatttgaaactt 20535544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27893225 - 27893136
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaact-aaaagacatatttaaaactt 89  Q
    |||| ||||||||| ||||||||||||||||||| || |||| ||||||| ||||||| |||||||||| ||||||| ||||| ||||||    
T  27893225 taacggctacatcatcatcaattaattattaactgacagcagaggtaacgttgaaatagtttatcaactaaaaagacctatttgaaactt 27893136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 42117172 - 42117239
Alignment:
Q  42 ggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaa 108  Q
    ||||||||||||||||  ||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  42117172 ggggtaacggtgaaattgtttatcaactaaaaggacctatttaaaacttttgaaacttaaaggactaa 42117239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 212
Target Start/End: Original strand, 39301841 - 39301962
Alignment:
Q  93 aaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaatt-aaatgactgacttaaaaattctatgaaactaaaa 190  Q
    |||||||||| | ||| ||||||||||| ||||| || || ||| || ||||||||||| ||||| ||| |||| ||||||||||||||| |||||||||    
T  39301841 aaacttaaagaaataacttaaaaattctgtcaaactaaaaagatttaattaaaacttttaaaatttaaaggactaacttaaaaattctatcaaactaaaa 39301940  T
Q  191 ggaccaaactttgtatttagcc 212  Q
    ||||| ||| |  |||||||||    
T  39301941 ggaccgaacataatatttagcc 39301962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 36196466 - 36196554
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||| |||||||| ||||| ||| |||||| ||  ||||||| |||||    
T  36196466 gcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaactcaaatgactaacttggaaattctgtcaaa 36196554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 30907288 - 30907434
Alignment:
Q  48 acggtgaaataatttatcaactaaaagacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa-ttataa-gatctatttaaaa 145  Q
    |||| ||||||||||||||  |||| ||| ||||| |||||||| |||||||||||||||| || | |||||| ||||| ||| || || ||| || |||    
T  30907288 acggcgaaataatttatca--taaatgacttatttgaaacttttgaaacttaaaggactaacttgagaattctttcaaacttaaaaggacctaattgaaa 30907385  T
Q  146 cttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaagga 193  Q
    |||| |||| |||||||||| ||||| ||||| | | ||||||||||||    
T  30907386 ctttcgaaacttaaatgactaacttataaattttgtcaaactaaaagga 30907434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 39301889 - 39301934
Alignment:
Q  81 ttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  39301889 ttaaaacttttaaaatttaaaggactaacttaaaaattctatcaaa 39301934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 15506154 - 15506074
Alignment:
Q  32 actaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaattt 111  Q
    |||||| | |||| ||||||||||||| |||||||| ||||| ||| | |||||||||||| |||||||||||| ||||||    
T  15506154 actaacagtagggttaacggtgaaatagtttatcaattaaaatgacctctttaaaactttttaaacttaaaggattaattt 15506074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 34336185 - 34336126
Alignment:
Q  50 ggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    ||||||||| ||||| |||||||| ||| |||||||||||||| ||||||||||||||||    
T  34336185 ggtgaaatagtttattaactaaaaagacctatttaaaacttttgaaacttaaaggactaa 34336126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 19080784 - 19080702
Alignment:
Q  45 gtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    |||||||||||||| |||||||||||||| ||| ||| | |||||||| ||||||||| | |||| || |||||||| |||||    
T  19080784 gtaacggtgaaatagtttatcaactaaaaggacctatatgaaacttttgaaacttaaatgtctaacttgaaaattctgtcaaa 19080702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 5117052 - 5117093
Alignment:
Q  50 ggtgaaataatttatcaact-aaaagacatatttaaaacttt 90  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  5117052 ggtgaaataatttatcaactaaaaagacatatttaaaacttt 5117093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 27893524 - 27893593
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    ||||| ||||| ||||||| |||||||||||||| ||  ||||| |||||||| ||||||||||||||||    
T  27893524 cagggttaacgatgaaatagtttatcaactaaaatgatctatttgaaacttttgaaacttaaaggactaa 27893593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 34336109 - 34336048
Alignment:
Q  66 aactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    |||||||| |||||| || ||||||| |||||||||||||||||||| |||||| |||||||    
T  34336109 aactaaaatgacataattgaaactttcaaaacttaaaggactaatttgaaaattttatcaaa 34336048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 31264125 - 31264209
Alignment:
Q  43 gggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    |||| ||||||||||| |||||||||||||| ||| ||||| |||||||| |||||||||  ||||| ||  ||||||| |||||    
T  31264125 gggtgacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaataactaacttggaaattctgtcaaa 31264209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8902961 - 8902853
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| ||||||||||||||| |||||||||||   ||  |||||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  8902961 taacggctacatcagcatcagttaattattaatcgacaacaggggtaacagtgaaataatttatcaactaaaaggacttatttaaaacttttgaaactta 8902862  T
Q  100 aaggactaa 108  Q
    |||||||||    
T  8902861 aaggactaa 8902853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27351251 - 27351143
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| |||| |||| ||||| ||||||||||||| || |||||||||||||||||||| |||||||||||||| ||| ||||| | |||||| |||||||    
T  27351251 taacggctatatcaacatcagttaattattaactgacagcaggggtaacggtgaaatagtttatcaactaaaatgacttatttgatacttttgaaactta 27351152  T
Q  100 aaggactaa 108  Q
    |||||||||    
T  27351151 aaggactaa 27351143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 208
Target Start/End: Complemental strand, 34254660 - 34254489
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatct 137  Q
    |||||||||| |||||||| |||||| |||||||| | |||||| |||||||| |||||||||||||| | |||  |||||| ||||| || || |||||    
T  34254660 caggggtaacagtgaaatagtttatcgactaaaagcatatatttgaaacttttgaaacttaaaggactgacttaggaattctgtcaaactaaaaggatct 34254561  T
Q  138 atttaaaacttttgaa-attaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtattt 208  Q
    ||||||||||||||||  ||||| |||  |||| | |||||| | |||||||||||| ||||| ||||||||    
T  34254560 atttaaaacttttgaaccttaaaggaccaacttgagaattctgtcaaactaaaaggaacaaacattgtattt 34254489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 48352682 - 48352774
Alignment:
Q  17 atcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    |||| ||||||||||||| || ||| ||||||| |||||||| |||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  48352682 atcagttaattattaactgacagcaagggtaacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaaggactaa 48352774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 10686680 - 10686838
Alignment:
Q  43 gggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatt 140  Q
    |||||||||||||||| |||||||||||||| ||| ||||| |||||||||||||||||| |||||| || | |||||| |  || || || || |||      
T  10686680 gggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttttaaaacttaaatgactaacttgagaattctgttgaagtaaaaggacctaac 10686779  T
Q  141 taaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    | ||||||| |||| ||||| |||| |||| |||||||| | |||||||||||||||||    
T  10686780 ttaaactttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggaccaaa 10686838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 44963992 - 44963928
Alignment:
Q  48 acggtgaaataatttatcaact-aaaagacatatttaaaacttttaaaacttaaaggactaattt 111  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||| |||||||||||||||||||    
T  44963992 acggtgaaatagtttatcaactgaaaagatatatttaaaacttttgaaacttaaaggactaattt 44963928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 1765846 - 1765775
Alignment:
Q  48 acggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaatt 118  Q
    ||||||||||| ||||||||||||||| |  |||||||||||||| |||||||||||||||||||| |||||    
T  1765846 acggtgaaatagtttatcaactaaaaggatctatttaaaacttttgaaacttaaaggactaatttagaaatt 1765775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 48352400 - 48352306
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaa 94  Q
    |||| ||||||||||| | | ||||||||||| | || ||||||||| |||||||||| ||||||||||||||| || ||||| |||||||||||    
T  48352400 taacggctacatcagcctgagttaattattaattgacagcaggggtagcggtgaaatagtttatcaactaaaagaacctatttgaaacttttaaa 48352306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27351468 - 27351541
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag 74  Q
    |||| ||||||||||||||| ||||||||||||| ||| |||||||||  |||||||| |||||||| ||||||    
T  27351468 taacggctacatcagcatcacttaattattaactgacgacaggggtaatagtgaaatagtttatcaagtaaaag 27351541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 2965583 - 2965528
Alignment:
Q  49 cggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaagg 103  Q
    |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  2965583 cggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaagg 2965528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 34254949 - 34254997
Alignment:
Q  12 tcagcatcaattaattattaactaacggcaggggtaacggtgaaataat 60  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  34254949 tcagcatcaattaattattaactgacagcaagggtaacggtgaaataat 34254997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39302618 - 39302692
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaaga 75  Q
    |||| |||||||| |||||| ||| ||||||||| |  ||| || |||| |||||||||||||||||||||||||    
T  39302618 taacggctacatctgcatcagttagttattaactgatagcatggctaacagtgaaataatttatcaactaaaaga 39302692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 8903242 - 8903307
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaagga 104  Q
    |||||||||| ||||||||||||| ||||||||| || |||||| |||||||  ||||||||||||    
T  8903242 caggggtaacagtgaaataatttagcaactaaaatgatatatttgaaactttcgaaacttaaagga 8903307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 198
Target Start/End: Original strand, 29419008 - 29419173
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatattta----aaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-g 133  Q
    ||||| |||||||||| ||||||||||||||||| ||| ||||||    |||||||| ||||||||| |||||||||   |||||| ||||| || || |    
T  29419008 cagggataacggtgaagtaatttatcaactaaaatgacttatttatttgaaacttttgaaacttaaaagactaattttggaattctgtcaaactaaaagg 29419107  T
Q  134 atctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    | ||| || ||||||| |||| || || |||| ||||  ||||| | | |||||||||||||||||    
T  29419108 acctaattgaaactttcgaaacttgaaagactaacttggaaattatgtcaaactaaaaggaccaaa 29419173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 35701553 - 35701450
Alignment:
Q  88 ttttaaaacttaaaggactaatttaaaaattctatcaaattataaga-tctatttaaaacttttgaaattaaatgactgacttaaaaattctatgaaact 186  Q
    |||||||| ||||| |||||| || | |||| | |||||||| |||| | |||||||||||||||||||| ||  | | ||||||||||||| | |||||    
T  35701553 ttttaaaatttaaaagactaacttgagaattatgtcaaattaaaagaatttatttaaaacttttgaaatttaaaaattaacttaaaaattctgttaaact 35701454  T
Q  187 aaaa 190  Q
    ||||    
T  35701453 aaaa 35701450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 10685999 - 10685950
Alignment:
Q  41 aggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    |||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  10685999 aggggtaacggtaaaatagtttatcaactaaaatgacatatttgaaactt 10685950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 17898796 - 17898909
Alignment:
Q  84 aaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatg 181  Q
    |||||||| ||| ||||||||||||||| | |||||| ||||| || || ||  ||||| |||||||||||| ||||| |||| | ||   ||||||||     
T  17898796 aaacttttgaaatttaaaggactaatttgataattctgtcaaactaaaatgacttatttgaaacttttgaaacttaaaggactaatttgtgaattctatc 17898895  T
Q  182 aaactaaaaggacc 195  Q
    ||||||||||||||    
T  17898896 aaactaaaaggacc 17898909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 17898837 - 17898898
Alignment:
Q  66 aactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    |||||||| ||| ||||| |||||||| |||||||||||||||||||   ||||||||||||    
T  17898837 aactaaaatgacttatttgaaacttttgaaacttaaaggactaatttgtgaattctatcaaa 17898898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10686396 - 10686352
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcagggg 45  Q
    |||| ||||||||||||||| ||||||||||||| || |||||||    
T  10686396 taacggctacatcagcatcagttaattattaactgacagcagggg 10686352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 198
Target Start/End: Complemental strand, 18249153 - 18248958
Alignment:
Q  6 gctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaact-aaaagacatatttaaaacttttaaaacttaaagga 104  Q
    |||||||||| || | ||||||||||| | || |||||||||||| ||||||| |||||||||| ||||||| |||||||||||||| ||||||||| ||    
T  18249153 gctacatcagtattagttaattattaattgacagcaggggtaacgatgaaatagtttatcaactaaaaagacctatttaaaacttttgaaacttaaatga 18249054  T
Q  105 ctaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    |||| || | |||||| | ||| || || ||  || ||||||||||  |||  |||| || | ||||||||||||||| |||||||||||||||||    
T  18249053 ctaacttgagaattctgttaaactaaaaggacatagttaaaactttcaaaacgtaaaagattaacttaaaaattctatcaaactaaaaggaccaaa 18248958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 18951438 - 18951303
Alignment:
Q  66 aactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatga 162  Q
    |||||||| ||| ||||||||||||||||||||||||||||||| || | |||||||||||| || || |||||||||||||||||||||| ||||| ||    
T  18951438 aactaaaatgacctatttaaaacttttaaaacttaaaggactaacttgagaattctatcaaactaaaaggatctatttaaaacttttgaaacttaaagga 18951339  T
Q  163 ctgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    || ||||   |||||| | |||||||||||||||||    
T  18951338 ctaacttgggaattctgtcaaactaaaaggaccaaa 18951303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 20728969 - 20729114
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaactta 99  Q
    |||||||||||||||||| | |||||||||| || ||   | |||||| ||||||||| ||||||||||||||| || ||||| |||||||||||| |||    
T  20728969 taacagctacatcagcat-agttaattattatctgacaaaatgggtaatggtgaaatagtttatcaactaaaaggacctatttgaaacttttaaaattta 20729067  T
Q  100 aaggactaatttaaaaattctatcaaattataa-gatctatttaaaa 145  Q
    ||||||||| || |||||||| ||||| || || |||||||||||||    
T  20729068 aaggactaacttgaaaattctgtcaaactaaaaggatctatttaaaa 20729114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 5734641 - 5734534
Alignment:
Q  22 ttaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattct 120  Q
    ||||||||||||| || |||||||||||||||||||| ||||| |||||||| ||| ||||| ||||||||||||||||||||| ||| |||  ||||||    
T  5734641 ttaattattaactgacagcaggggtaacggtgaaatagtttattaactaaaatgacttatttgaaacttttaaaacttaaagga-taacttaggaattct 5734543  T
Q  121 atcaaatta 129  Q
     ||||||||    
T  5734542 gtcaaatta 5734534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 18238010 - 18237926
Alignment:
Q  43 gggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  18238010 gggtaacagtgaaatattttatcaactaaaaggacttatttaaaacttttaaaacttaaaggattaacttaaaaattctgtcaaa 18237926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 36418322 - 36418525
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaac--ggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaact 97  Q
    |||| |||||||||||||||  |||||||||||| ||  |   ||||||||||||||||| |||||||||||||| ||| ||||| |||||||| |||||    
T  36418322 taacggctacatcagcatcagctaattattaactgacatgaggggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaact 36418421  T
Q  98 taaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggacc 195  Q
    ||||||||||| || |||||| | ||||| || || || ||| || ||||||||||||  |||| |||| |||| | |||| | | ||||||||| ||||    
T  36418422 taaaggactaacttgaaaattatgtcaaactaaaaggacctaattgaaacttttgaaacgtaaaggactaacttgagaattatgtcaaactaaaaagacc 36418521  T
Q  196 aaac 199  Q
    ||||    
T  36418522 aaac 36418525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 1722648 - 1722490
Alignment:
Q  53 gaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataag-atctatttaaaactttt 150  Q
    |||||||||||| |||||||| ||||||||| |||||||| |||||||||||| ||| || | |||| | ||||| || ||| |||||||||||||||||    
T  1722648 gaaataatttataaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaactttt 1722549  T
Q  151 g-aaattaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtattt 208  Q
    | |||||||| |||| ||||   |||| | | |||||||||||||||||| | ||||||    
T  1722548 gaaaattaaaggactaacttgtgaattttgttaaactaaaaggaccaaacatggtattt 1722490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 13543533 - 13543683
Alignment:
Q  8 tacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggact 106  Q
    ||||||| ||||||||||||||||||| || |||  |||||| |||||||| |||||||| |||||| || ||||| |||||||| ||| |||||||| |    
T  13543533 tacatcaacatcaattaattattaactgacagcataggtaacagtgaaatagtttatcaagtaaaagaacctatttgaaacttttgaaatttaaaggatt 13543632  T
Q  107 aatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaatt 156  Q
    || |||| ||||||  |||| || || ||||| || |||||||||||||||    
T  13543633 aacttaagaattcttccaaactaaaaggatctgttaaaaacttttgaaatt 13543683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 13543241 - 13543178
Alignment:
Q  47 aacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaat 109  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  13543241 aacggtgaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaaggactaat 13543178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19279146 - 19279244
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactt 98  Q
    ||||| |||||||| |||||||||||||||||||||| |||||||||||  |||||||  |||| |||||||| ||| ||||| |||||||| ||||||    
T  19279146 taacaactacatcaacatcaattaattattaactaacagcaggggtaactctgaaatagcttattaactaaaaggacctatttgaaacttttgaaactt 19279244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 20728686 - 20728620
Alignment:
Q  43 gggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    |||||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  20728686 gggtaacggtgaaatagtttttcaactaaaaagacatatttgaaacttttaaaacttaaaggactaa 20728620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 1722937 - 1723017
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaatt 118  Q
    ||||||||||| |||||||| |||||||||||||| || |||||||||||||||||||||||||  ||||| ||| |||||    
T  1722937 gcaggggtaacagtgaaatagtttatcaactaaaatgatatatttaaaacttttaaaacttaaaacactaacttagaaatt 1723017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 18238306 - 18238370
Alignment:
Q  45 gtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  18238306 gtaacggtgaaataatttatcaactaaaatgacctatttaaaacttttgaaacttaaacgactaa 18238370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 30738181 - 30738312
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttat--caactaaaa-gacatatttaaaacttttaaaact 97  Q
    |||| |||| |||| ||||| |||||||||| || || ||| |||||||||||||||| |||||  ||||||||| ||||||||| |||||||| ||||     
T  30738181 taacggctaaatcaacatcagttaattattatctgacagcaagggtaacggtgaaatagtttatcacaactaaaatgacatatttgaaacttttgaaaca 30738280  T
Q  98 taaaggactaatttaaaaattctatcaaatta 129  Q
    |||||||| || || | |||||| ||||||||    
T  30738281 taaaggacaaacttgagaattctgtcaaatta 30738312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 196
Target Start/End: Original strand, 5734940 - 5735102
Alignment:
Q  36 acggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-g 133  Q
    ||||||||||||| ||||||||| |||||||||||||| ||| ||||| ||||||||  ||||||||||||||| || | |||||| | ||| || || |    
T  5734940 acggcaggggtaatggtgaaatagtttatcaactaaaatgacctatttgaaactttt-gaacttaaaggactaacttgagaattctgttaaactaaaagg 5735038  T
Q  134 atctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggacca 196  Q
    |  || |||||| ||| |||| |||||||||| |||| | ||||| || |||||||||||||||    
T  5735039 acataattaaaattttcgaaatttaaatgactaacttgagaattcgatcaaactaaaaggacca 5735102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 30737934 - 30737829
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggac 105  Q
    |||||||||||| | ||||||| ||||| |  | |||||||||||| ||| | |||||||||| ||| ||| |||||||||||||| ||||||||| |||    
T  30737934 ctacatcagcataagttaattactaactgatagtaggggtaacggtaaaacagtttatcaacttaaatgacttatttaaaacttttgaaacttaaaagac 30737835  T
Q  106 taattt 111  Q
    ||||||    
T  30737834 taattt 30737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35190346 - 35190418
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa 73  Q
    |||| |||| |||||||||| ||||||||||||| ||  || |||||||||||||||| ||||||||||||||    
T  35190346 taaccgctaaatcagcatcagttaattattaactgacaacaagggtaacggtgaaatagtttatcaactaaaa 35190418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 32459525 - 32459459
Alignment:
Q  43 gggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    ||||||| |||||||| |||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  32459525 gggtaacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaatgactaa 32459459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 35190098 - 35190032
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa 73  Q
    |||||||| ||||| ||||||||||||| ||  |||||||||| |||||||| ||||||||||||||    
T  35190098 ctacatcaacatcagttaattattaactgacaacaggggtaacagtgaaatagtttatcaactaaaa 35190032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 6336259 - 6336146
Alignment:
Q  84 aaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatg 181  Q
    |||||||| |||||||||||||||| ||  ||||||| ||||| || || || ||||||||||||||||||| ||||| |||| ||||  |||||||       
T  6336259 aaacttttgaaacttaaaggactaacttggaaattctttcaaactaaaatgacctatttaaaacttttgaaacttaaaggactaacttggaaattctgcc 6336160  T
Q  182 aaactaaaaggacc 195  Q
    ||||||||||||||    
T  6336159 aaactaaaaggacc 6336146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 35891223 - 35891303
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaaga-catatttaaaacttttaaaacttaaaggactaatttaaaaatt 118  Q
    |||||||||||| ||||||| ||||||||| |||| | | ||||| |||||||| |||||||||||||||| || ||||||    
T  35891223 gcaggggtaacgctgaaatagtttatcaacaaaaaaaacttatttgaaacttttgaaacttaaaggactaacttgaaaatt 35891303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 13538626 - 13538575
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  13538626 gcaggggtaacggtgaaatagtttatcaactaaaatgacatatttgaaactt 13538575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 38405230 - 38405147
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    |||||||| ||||| ||||||||||||| ||   |||||||||||| ||| | |||||||||||||| ||||||||| ||||||    
T  38405230 ctacatcaacatcagttaattattaactgacaataggggtaacggtaaaacagtttatcaactaaaatgacatatttgaaactt 38405147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 6336298 - 6336406
Alignment:
Q  48 acggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataag-atctatttaaaa 145  Q
    ||||||||||| |||||||||| |||| |||||||| |||| ||| ||| |||||||||||| |||  ||||||  ||||||| ||| ||||| || |||    
T  6336298 acggtgaaatagtttatcaactgaaaggacatatttgaaacatttgaaatttaaaggactaacttaggaattctgacaaattaaaagaatctaattgaaa 6336397  T
Q  146 cttttgaaa 154  Q
    |||| ||||    
T  6336398 ctttcgaaa 6336406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 18321223 - 18321271
Alignment:
Q  86 acttttaaaacttaaaggactaatttaaaaattctatcaaattataaga 134  Q
    |||||||||| |||||||||||| ||||||||||| |||||||| ||||    
T  18321223 acttttaaaatttaaaggactaacttaaaaattctgtcaaattaaaaga 18321271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 32459822 - 32459890
Alignment:
Q  44 ggtaacggtgaaataatttatcaactaaaag-acatatttaaaacttttaaaacttaaaggactaattt 111  Q
    |||||| |||||||| |||||| |||||||| || ||||| ||| |||||||||||||| |||||||||    
T  32459822 ggtaacagtgaaatagtttatcgactaaaaggacctatttgaaatttttaaaacttaaaagactaattt 32459890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 26275971 - 26276021
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    |||||||||||||||||||  ||||||||||||| ||||||||| ||||||    
T  26275971 caggggtaacggtgaaatagcttatcaactaaaaggacatatttgaaactt 26276021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 38405518 - 38405560
Alignment:
Q  48 acggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  38405518 acggtgaaatagtttatcaactaaaaggacatatttaaaactt 38405560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 14235669 - 14235568
Alignment:
Q  99 aaaggactaatttaaaaattctatcaaattataag-atctatttaaaactttt-gaaattaaatgactgacttaaaaattctatgaaactaaaaggacca 196  Q
    |||||||||| || | |||||| ||||| || ||| | ||| ||||||||||| ||| ||||| |||| ||||||||||| | | |||||||||||||||    
T  14235669 aaaggactaacttgagaattctgtcaaactaaaaggacctaattaaaacttttagaacttaaaggactaacttaaaaattatttcaaactaaaaggacca 14235570  T
Q  197 aa 198  Q
    ||    
T  14235569 aa 14235568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 14235627 - 14235590
Alignment:
Q  81 ttaaaacttttaaaacttaaaggactaatttaaaaatt 118  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  14235627 ttaaaacttttagaacttaaaggactaacttaaaaatt 14235590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 32660375 - 32660266
Alignment:
Q  84 aaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatg 181  Q
    |||||||| |||||||||||||||| |||  |||||| ||||| || || || |||||| |||||||||||| ||||| |||| |||| | |||| | |     
T  32660375 aaacttttgaaacttaaaggactaacttaggaattctgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgagaattttgta 32660276  T
Q  182 aaactaaaag 191  Q
    ||||||||||    
T  32660275 aaactaaaag 32660266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 33992675 - 33992712
Alignment:
Q  79 atttaaaacttttaaaacttaaaggactaatttaaaaa 116  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  33992675 atttaaaacttttaaaacataaaggaccaatttaaaaa 33992712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 35891263 - 35891339
Alignment:
Q  137 tatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaactttgtatttagcc 212  Q
    ||||| |||||||||||| ||||| |||| |||| |||||| | | |||||||||||| ||||  ||||||||||||    
T  35891263 tatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggatcaaaagttgtatttagcc 35891339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 213 - 21
Alignment:
Q  8 tacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggact 106  Q
    ||||||| ||||||||||||||||||| ||  |||| ||||| |||||||| |||||||||||||| ||||||||| |||||||| |||||||||  |||    
T  213 tacatcaacatcaattaattattaactgacaacaggagtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttcaaacttaaa-tact 115  T
Q  107 aatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaaa 198  Q
    || |||  |||||  ||||| || || ||| |||||||||||||||||| || || |||| |||| | |||| | | |||||||||||||||||    
T  114 aacttaggaattcggtcaaactaaaaggatatatttaaaacttttgaaacttgaaggactaacttgagaattatgtcaaactaaaaggaccaaa 21  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 36 - 197
Target Start/End: Original strand, 494 - 658
Alignment:
Q  36 acggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-g 133  Q
    |||||||||||||| |||||||| |||||||||||||| ||| ||||| |||||||| ||| |||||||||||| || | |||||| |||||||| || |    
T  494 acggcaggggtaacagtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaagg 593  T
Q  134 atctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaa 197  Q
    | ||| || |||||||  ||| ||||| |||| |||| |||||||||| ||| ||||||||||||    
T  594 acctaattgaaactttcaaaacttaaaggactaacttgaaaattctatcaaattaaaaggaccaa 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 16275 - 16187
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||||  ||||| |||||||    
T  16275 gcaggggtaacggtgaaatagtttatcaactaaaatgacctatttaaaactttttaaacttaaaggactaatttggaaattttatcaaa 16187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 16570 - 16657
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    ||||| |||| |||||||| |||||||||||||| ||| |||||||||||||| |||||||||||| ||| ||  ||||| |||||||    
T  16570 cagggataactgtgaaatagtttatcaactaaaatgacttatttaaaactttttaaacttaaaggattaacttggaaattttatcaaa 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24707607 - 24707499
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| ||||||||| |||||||||||||||||||  | ||| || ||| ||||||||| |||||||||||||| || |||||||||||||| ||||||||    
T  24707607 taacggctacatcaacatcaattaattattaactgccagcaaggttaatggtgaaatagtttatcaactaaaatgatatatttaaaactttgaaaactta 24707508  T
Q  100 aaggactaa 108  Q
    |||||||||    
T  24707507 aaggactaa 24707499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 21376728 - 21376609
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataagatc- 136  Q
    |||| ||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||| ||  | |||||||||||||| || |||| |     
T  21376728 gcagtggtaacggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggaccaacctgaaaattctatcaaactaaaagaact 21376629  T
Q  137 tatttaaaacttttgaaatt 156  Q
    || ||||||||||| |||||    
T  21376628 taattaaaacttttaaaatt 21376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31247326 - 31247224
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaa-aagacatatttaaaacttttaaaactta 99  Q
    |||| ||||||||||||||||||||||| ||||| || ||||| ||||| || ||||| |||||||||||| | ||| ||||| |||||||| |||||||    
T  31247326 taacggctacatcagcatcaattaattaataactgacagcaggagtaacagtaaaatagtttatcaactaataggacttatttgaaacttttgaaactta 31247227  T
Q  100 aag 102  Q
    |||    
T  31247226 aag 31247224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14629415 - 14629342
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaaga 75  Q
    |||| ||||||| ||||| | ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  14629415 taacggctacat-agcattagttaattattaactgacaacaggggtaacggtgaaataatttatcaactaaaaga 14629342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 31247607 - 31247676
Alignment:
Q  40 caggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaa 108  Q
    |||||||||  ||||||||||||||||||||||| ||||||||| |||||||| |||||||||| |||||    
T  31247607 caggggtaatagtgaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaagcactaa 31247676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 35555727 - 35555572
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaactta 99  Q
    |||| |||| |||| ||| | ||||||||||||| |  |||||| ||||||||||||| |||||||||||||| ||  ||||| ||||||| |||| |||    
T  35555727 taacggctatatcaacattagttaattattaactgatagcagggataacggtgaaatagtttatcaactaaaatgatttatttgaaactttcaaaattta 35555628  T
Q  100 aaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa 154  Q
    | ||||||| || | |||||| ||||| || || ||| || || ||||||||||||    
T  35555627 atggactaacttgataattctgtcaaactaaaatgatttaattgaaacttttgaaa 35555572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 3087234 - 3087185
Alignment:
Q  6 gctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaat 57  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  3087234 gctacatcagcatcaattaattattaac--acagcaggggtaacggtgaaat 3087185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 4276297 - 4276217
Alignment:
Q  39 gcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaatt 118  Q
    ||||||||||| |||||||| |||||||||||||| ||  ||||| |||||||| |||||||||| |||||  ||||||||    
T  4276297 gcaggggtaacagtgaaatagtttatcaactaaaatgaactatttgaaacttttgaaacttaaagaactaacataaaaatt 4276217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 54456764 - 54456685
Alignment:
Q  48 acggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaa 126  Q
    |||||||| || |||||||||||||| ||||||||| |||||||  ||||||||| |||||||||  ||||||| |||||    
T  54456764 acggtgaattagtttatcaactaaaatgacatatttgaaactttcgaaacttaaatgactaatttcgaaattctgtcaaa 54456685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 21376950 - 21377016
Alignment:
Q  8 tacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag 74  Q
    ||||||| | ||| ||||||||||||| || | |||||||||||||||||| ||||| |||||||||    
T  21376950 tacatcaacctcagttaattattaactgacagtaggggtaacggtgaaatagtttataaactaaaag 21377016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 19153974 - 19153917
Alignment:
Q  45 gtaacggtgaaataatttatcaact-aaaagacatatttaaaacttttaaaacttaaa 101  Q
    ||||| ||||||||||||||||||| ||||||||||||| |||| ||| |||||||||    
T  19153974 gtaacagtgaaataatttatcaactaaaaagacatatttgaaacatttgaaacttaaa 19153917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 3087143 - 3087093
Alignment:
Q  78 tatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaatta 129  Q
    |||||||||||||| ||||||||| |||||| || |||||||||||||||||    
T  3087143 tatttaaaacttttgaaacttaaa-gactaacttgaaaattctatcaaatta 3087093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 21410273 - 21410332
Alignment:
Q  44 ggtaacggtgaaataatttatcaactaaaa-gacat-atttaaaacttttaaaacttaaa 101  Q
    |||||| |||||||| |||||||||||||| ||||| ||||||||||||| |||||||||    
T  21410273 ggtaacagtgaaatagtttatcaactaaaatgacataatttaaaacttttgaaacttaaa 21410332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 35545254 - 35545168
Alignment:
Q  51 gtgaaataatttatcaact-aaaagacatatttaaaactttt-aaaacttaaaggactaatttaaaaattctatcaaattataagat 135  Q
    |||||||| |||||||||| ||||||| ||||||||| |||| |||| |||| ||| ||| ||||||||||| ||||| || |||||    
T  35545254 gtgaaatagtttatcaactaaaaagacttatttaaaatttttaaaaagttaatggattaacttaaaaattctttcaaactaaaagat 35545168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 3087143 - 3087086
Alignment:
Q  137 tatttaaaacttttgaaattaaatgactgacttaaaaattctatgaaactaaaaggac 194  Q
    |||||||||||||||||| | || |||| |||| |||||||||| ||| |||||||||    
T  3087143 tatttaaaacttttgaaacttaaagactaacttgaaaattctatcaaattaaaaggac 3087086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28983 - 29072
Alignment:
Q  1 taacagctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaactt 89  Q
    |||| ||||||||| ||||||||||||||||||| ||  |||| ||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  28983 taaccgctacatcaacatcaattaattattaactgacaacaggagtaacagtgaaataatttatcaactaaaatgacatatttgaaactt 29072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 197
Target Start/End: Complemental strand, 28709 - 28545
Alignment:
Q  36 acggcaggggtaacggtgaaataatttatcaactaaaa-gacatatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-g 133  Q
    |||||||||||||| |||||||| |||||||||||||| ||| ||||| |||||||| ||  |||||||||||| || | |||||| |||||||| || |    
T  28709 acggcaggggtaacagtgaaatagtttatcaactaaaatgacctatttgaaacttttgaattttaaaggactaacttgagaattctgtcaaattaaaagg 28610  T
Q  134 atctatttaaaacttttgaaa-ttaaatgactgacttaaaaattctatgaaactaaaaggaccaa 197  Q
    | ||| || |||||||  ||| ||||| |||| ||||  ||||||| | ||| ||||||||||||    
T  28609 acctaattgaaactttcaaaacttaaaggactaacttggaaattctgtcaaattaaaaggaccaa 28545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 9832 - 9899
Alignment:
Q  7 ctacatcagcatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaag 74  Q
    |||||||||| || |||||||||||||| ||  || ||| || ||||||||| |||||||||||||||    
T  9832 ctacatcagcctcgattaattattaactgacaccaagggcaaaggtgaaatagtttatcaactaaaag 9899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 198
Target Start/End: Original strand, 45205 - 45327
Alignment:
Q  78 tatttaaaacttttaaaacttaaaggactaatttaaaaattctatcaaattataa-gatctatttaaaacttttgaaa-ttaaatgactgacttaaaaat 175  Q
    ||||| |||||||||||||||||| ||||||||| |||||| | ||||| || || || ||| || |||||||| ||| ||||| |||| |||| | |||    
T  45205 tatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaat 45304  T
Q  176 tctatgaaactaaaaggaccaaa 198  Q
    | | | |||| ||||||||||||    
T  45305 tatgtcaaaccaaaaggaccaaa 45327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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