View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19497_low_4 (Length: 350)
Name: NF19497_low_4
Description: NF19497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19497_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 21218879 - 21219221
Alignment:
| Q |
1 |
tcattggggtaacctgccttgcttcgcaacagtcaggaattatgagctctattcccttaggatccgctgagcacagaagacaaaaaacaaataattacat |
100 |
Q |
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| T |
21218879 |
tcattggggtaacctgccttgcttcgcaacagtcaggaattatgagctctattcccttaggatccgctgagcacagaagacaaaaaacaaataattacat |
21218978 |
T |
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| Q |
101 |
tagggatgtatattacaatgacacaaaatcttatagaatcgatacatacatacacacaaaacaataaataaaatgatccattaaccaggatatatcagca |
200 |
Q |
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| T |
21218979 |
tagggatgtatattacaatgacacaaaatcttatagaatcgatacatacatacacacagaacaataaataaaatgatccattaaccaggatatatcagca |
21219078 |
T |
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| Q |
201 |
cagctgacaaatcagtcaaacattgctgtatactaaaagatctcatcaaaagtacgatagtgtaatcagtgaatcaagtactatagttgcacaaaacaac |
300 |
Q |
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| T |
21219079 |
cagttgacaaatcagtcaaacattgctgtatactaaaagatctcatcaaaagtacgatagtgtaatcagtgaatcaagtactatagttgcacaaaacaac |
21219178 |
T |
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| Q |
301 |
tatttagtaaaatataatcaagattccaggagtatgatgatgt |
343 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21219179 |
tatttagtaaaatataatcaagattccaggagtatgatgatgt |
21219221 |
T |
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