View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19497_low_8 (Length: 207)

Name: NF19497_low_8
Description: NF19497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19497_low_8
NF19497_low_8
[»] chr1 (41 HSPs)
chr1 (1-199)||(27250621-27250819)
chr1 (1-207)||(21026711-21026917)
chr1 (47-205)||(22354458-22354616)
chr1 (9-201)||(22532308-22532500)
chr1 (1-201)||(50210103-50210303)
chr1 (1-201)||(34509811-34510011)
chr1 (1-184)||(22468604-22468786)
chr1 (1-203)||(20135218-20135420)
chr1 (81-207)||(22356058-22356185)
chr1 (81-207)||(22357744-22357871)
chr1 (1-205)||(38801277-38801478)
chr1 (93-191)||(48603637-48603735)
chr1 (1-142)||(45574836-45574977)
chr1 (1-142)||(13988894-13989034)
chr1 (1-142)||(21475081-21475221)
chr1 (1-142)||(21923285-21923425)
chr1 (1-142)||(23593729-23593869)
chr1 (1-142)||(31612341-31612481)
chr1 (1-142)||(21840795-21840935)
chr1 (1-142)||(433040-433178)
chr1 (1-143)||(29298165-29298305)
chr1 (1-142)||(29776716-29776856)
chr1 (8-142)||(16275357-16275491)
chr1 (46-145)||(33797595-33797694)
chr1 (1-142)||(16361945-16362085)
chr1 (1-136)||(21861525-21861660)
chr1 (1-136)||(21896211-21896346)
chr1 (1-70)||(20847175-20847244)
chr1 (1-142)||(13212855-13212996)
chr1 (1-142)||(21346989-21347130)
chr1 (1-154)||(21787979-21788132)
chr1 (1-142)||(22123061-22123202)
chr1 (37-142)||(40389217-40389323)
chr1 (1-142)||(21707195-21707335)
chr1 (1-142)||(21711737-21711877)
chr1 (1-92)||(15860052-15860143)
chr1 (148-207)||(20847103-20847163)
chr1 (1-142)||(21342124-21342265)
chr1 (1-117)||(35261055-35261168)
chr1 (1-35)||(20454609-20454643)
chr1 (1-57)||(21714573-21714629)
[»] chr4 (54 HSPs)
chr4 (1-205)||(12902788-12902992)
chr4 (1-207)||(7088908-7089114)
chr4 (1-207)||(44052860-44053066)
chr4 (1-207)||(23374243-23374449)
chr4 (1-205)||(22636466-22636669)
chr4 (1-205)||(7893734-7893935)
chr4 (1-182)||(16270145-16270325)
chr4 (1-205)||(16239856-16240059)
chr4 (1-154)||(7798805-7798958)
chr4 (1-201)||(16377413-16377611)
chr4 (1-201)||(14038679-14038879)
chr4 (1-205)||(14053188-14053391)
chr4 (85-199)||(3096759-3096872)
chr4 (1-205)||(17046518-17046719)
chr4 (1-95)||(52873363-52873457)
chr4 (1-142)||(6899922-6900062)
chr4 (93-205)||(17047958-17048070)
chr4 (1-142)||(18215268-18215408)
chr4 (1-142)||(23803259-23803399)
chr4 (1-142)||(44928873-44929014)
chr4 (1-142)||(12301-12441)
chr4 (1-142)||(15118346-15118486)
chr4 (1-142)||(51463862-51464002)
chr4 (1-142)||(52312538-52312678)
chr4 (1-142)||(3515035-3515175)
chr4 (1-142)||(19242727-19242867)
chr4 (1-142)||(19618166-19618306)
chr4 (1-142)||(44773081-44773221)
chr4 (1-136)||(1837509-1837643)
chr4 (1-136)||(44615316-44615450)
chr4 (1-136)||(50222339-50222473)
chr4 (1-116)||(54798729-54798844)
chr4 (1-142)||(15355318-15355459)
chr4 (1-142)||(14970701-14970841)
chr4 (1-142)||(44102242-44102382)
chr4 (1-117)||(18239438-18239553)
chr4 (1-96)||(14280344-14280438)
chr4 (1-136)||(13806-13941)
chr4 (1-61)||(3096324-3096384)
chr4 (1-142)||(12610978-12611111)
chr4 (1-142)||(15367721-15367862)
chr4 (1-142)||(15402734-15402875)
chr4 (1-111)||(15370049-15370159)
chr4 (3-134)||(21815587-21815717)
chr4 (19-145)||(43256106-43256230)
chr4 (1-142)||(15371233-15371374)
chr4 (1-142)||(15373514-15373655)
chr4 (1-142)||(22353864-22354005)
chr4 (1-111)||(16223563-16223673)
chr4 (37-142)||(20149892-20149998)
chr4 (42-142)||(7641186-7641286)
chr4 (1-116)||(8574844-8574957)
chr4 (1-136)||(43198508-43198645)
chr4 (1-141)||(15093802-15093942)
[»] chr6 (54 HSPs)
chr6 (1-205)||(20360846-20361050)
chr6 (1-206)||(20638168-20638373)
chr6 (1-207)||(17287680-17287886)
chr6 (1-202)||(22780116-22780317)
chr6 (1-201)||(29060571-29060771)
chr6 (1-136)||(16496275-16496410)
chr6 (1-201)||(18409717-18409917)
chr6 (1-201)||(25629245-25629445)
chr6 (1-197)||(19303435-19303630)
chr6 (1-201)||(20593804-20594004)
chr6 (1-142)||(1595577-1595717)
chr6 (1-136)||(20076731-20076862)
chr6 (1-142)||(25754837-25754977)
chr6 (1-205)||(16920519-16920720)
chr6 (1-142)||(8055057-8055197)
chr6 (1-142)||(12742345-12742485)
chr6 (1-142)||(18456747-18456887)
chr6 (1-142)||(19005074-19005214)
chr6 (1-142)||(19858913-19859053)
chr6 (1-142)||(22782255-22782395)
chr6 (1-142)||(24422575-24422715)
chr6 (1-142)||(30676704-30676844)
chr6 (1-142)||(33861822-33861962)
chr6 (1-142)||(33864306-33864446)
chr6 (1-136)||(18334592-18334726)
chr6 (1-116)||(25688530-25688644)
chr6 (1-136)||(26924640-26924774)
chr6 (1-145)||(35245617-35245758)
chr6 (1-142)||(34963401-34963541)
chr6 (1-117)||(18461907-18462022)
chr6 (1-136)||(2291180-2291314)
chr6 (1-142)||(16448520-16448661)
chr6 (1-189)||(22831534-22831721)
chr6 (1-142)||(1540905-1541045)
chr6 (1-117)||(25644351-25644468)
chr6 (1-142)||(25656657-25656797)
chr6 (1-142)||(19847943-19848085)
chr6 (1-142)||(3852011-3852151)
chr6 (19-145)||(27415887-27416011)
chr6 (1-142)||(20556888-20557026)
chr6 (8-204)||(25603272-25603467)
chr6 (1-100)||(15041541-15041640)
chr6 (1-117)||(20109169-20109285)
chr6 (1-100)||(23992458-23992554)
chr6 (1-205)||(11185536-11185737)
chr6 (8-171)||(25611643-25611805)
chr6 (1-70)||(18821866-18821934)
chr6 (1-35)||(21766722-21766756)
chr6 (1-46)||(28496515-28496561)
chr6 (1-46)||(29808926-29808972)
chr6 (1-90)||(18907138-18907226)
chr6 (152-184)||(5834404-5834436)
chr6 (152-184)||(20177096-20177128)
chr6 (152-184)||(22158863-22158895)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-207)||(13242-13448)
[»] chr5 (52 HSPs)
chr5 (5-207)||(22075054-22075256)
chr5 (1-205)||(8286728-8286933)
chr5 (1-205)||(23390382-23390586)
chr5 (1-207)||(25421563-25421769)
chr5 (1-207)||(25431425-25431631)
chr5 (1-201)||(9077983-9078183)
chr5 (1-205)||(13025342-13025545)
chr5 (1-205)||(13095526-13095729)
chr5 (1-205)||(24493600-24493803)
chr5 (1-136)||(21808344-21808479)
chr5 (1-136)||(21729019-21729154)
chr5 (1-205)||(21292856-21293059)
chr5 (1-201)||(1096498-1096698)
chr5 (1-199)||(24529251-24529449)
chr5 (93-205)||(22107259-22107371)
chr5 (1-142)||(264762-264902)
chr5 (19-145)||(18356364-18356488)
chr5 (1-136)||(20909040-20909174)
chr5 (1-136)||(39363412-39363546)
chr5 (1-135)||(10732941-10733074)
chr5 (1-185)||(22412215-22412388)
chr5 (1-142)||(29329962-29330102)
chr5 (1-76)||(21997549-21997624)
chr5 (1-142)||(36154777-36154914)
chr5 (1-136)||(42245365-42245499)
chr5 (1-142)||(2154607-2154748)
chr5 (1-142)||(18319027-18319168)
chr5 (1-142)||(20902002-20902143)
chr5 (3-185)||(18418613-18418793)
chr5 (5-142)||(29346012-29346148)
chr5 (46-145)||(20910745-20910844)
chr5 (1-142)||(11581193-11581333)
chr5 (37-142)||(29348516-29348621)
chr5 (37-142)||(29350989-29351094)
chr5 (1-142)||(39245164-39245304)
chr5 (1-136)||(22144080-22144215)
chr5 (1-100)||(17517192-17517291)
chr5 (8-142)||(32027428-32027561)
chr5 (1-141)||(37723934-37724073)
chr5 (1-142)||(31061096-31061237)
chr5 (1-137)||(10775674-10775810)
chr5 (1-76)||(23064539-23064613)
chr5 (1-76)||(38619462-38619536)
chr5 (108-201)||(21986037-21986130)
chr5 (2-142)||(24067136-24067276)
chr5 (1-88)||(20026942-20027031)
chr5 (1-67)||(20918017-20918082)
chr5 (1-71)||(21873281-21873351)
chr5 (1-117)||(21565573-21565688)
chr5 (45-116)||(20766095-20766166)
chr5 (1-57)||(26704102-26704158)
chr5 (1-57)||(26973835-26973891)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-207)||(933-1138)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-207)||(167863-168068)
scaffold0011 (1-205)||(51944-52148)
[»] chr7 (50 HSPs)
chr7 (8-207)||(26212034-26212233)
chr7 (1-207)||(9509220-9509426)
chr7 (1-205)||(12698862-12699067)
chr7 (1-205)||(10589070-10589273)
chr7 (1-206)||(16386132-16386338)
chr7 (1-185)||(18456319-18456502)
chr7 (1-205)||(38227512-38227715)
chr7 (3-205)||(40443424-40443624)
chr7 (1-201)||(3564254-3564454)
chr7 (1-142)||(13647356-13647497)
chr7 (1-205)||(27847719-27847920)
chr7 (1-142)||(16213712-16213852)
chr7 (1-142)||(456349-456489)
chr7 (1-142)||(11393281-11393421)
chr7 (1-142)||(11972524-11972664)
chr7 (1-142)||(15376707-15376847)
chr7 (1-142)||(16232548-16232688)
chr7 (1-142)||(18640300-18640440)
chr7 (1-142)||(20385117-20385257)
chr7 (1-142)||(21189589-21189729)
chr7 (1-142)||(27216888-27217028)
chr7 (1-142)||(32125519-32125659)
chr7 (1-142)||(41522945-41523085)
chr7 (1-142)||(41525407-41525547)
chr7 (1-117)||(24275199-24275314)
chr7 (1-136)||(14949122-14949256)
chr7 (2-89)||(48273421-48273508)
chr7 (1-142)||(24702266-24702406)
chr7 (1-116)||(16410087-16410201)
chr7 (1-136)||(18430740-18430874)
chr7 (1-142)||(3386361-3386501)
chr7 (1-142)||(44116537-44116677)
chr7 (1-173)||(2280036-2280209)
chr7 (1-101)||(13869374-13869474)
chr7 (8-136)||(14932688-14932817)
chr7 (8-136)||(15356123-15356252)
chr7 (8-136)||(15360237-15360366)
chr7 (37-142)||(26355977-26356082)
chr7 (37-142)||(26358429-26358534)
chr7 (1-136)||(38898376-38898511)
chr7 (39-142)||(20110611-20110714)
chr7 (1-142)||(24704716-24704853)
chr7 (1-142)||(17061909-17062049)
chr7 (4-142)||(12756665-12756802)
chr7 (1-99)||(13831401-13831498)
chr7 (46-103)||(2530126-2530183)
chr7 (1-57)||(18154875-18154931)
chr7 (1-46)||(811175-811221)
chr7 (1-145)||(15211488-15211632)
chr7 (1-89)||(22072944-22073033)
[»] chr2 (53 HSPs)
chr2 (1-205)||(23285896-23286096)
chr2 (1-207)||(23654270-23654476)
chr2 (1-205)||(22731120-22731324)
chr2 (1-205)||(22738066-22738269)
chr2 (1-207)||(298698-298905)
chr2 (1-200)||(23060544-23060742)
chr2 (1-186)||(23076473-23076658)
chr2 (1-205)||(38002-38204)
chr2 (1-205)||(22337146-22337350)
chr2 (1-205)||(20309139-20309340)
chr2 (8-201)||(23660061-23660253)
chr2 (1-142)||(22105440-22105581)
chr2 (1-142)||(21155054-21155194)
chr2 (1-142)||(18808971-18809111)
chr2 (1-142)||(23709526-23709666)
chr2 (1-142)||(23712007-23712147)
chr2 (1-142)||(24367802-24367942)
chr2 (1-142)||(32214915-32215055)
chr2 (1-142)||(39682341-39682481)
chr2 (1-136)||(23130890-23131024)
chr2 (1-136)||(23133357-23133491)
chr2 (4-173)||(23708536-23708706)
chr2 (1-136)||(26505407-26505541)
chr2 (1-136)||(26507885-26508019)
chr2 (1-136)||(34402522-34402656)
chr2 (125-207)||(27753730-27753812)
chr2 (1-142)||(571425-571565)
chr2 (1-142)||(6726023-6726163)
chr2 (1-142)||(32039492-32039632)
chr2 (1-117)||(23135618-23135733)
chr2 (1-142)||(43137327-43137467)
chr2 (1-136)||(24898195-24898330)
chr2 (1-136)||(24900678-24900813)
chr2 (1-136)||(24903155-24903290)
chr2 (1-136)||(24905632-24905767)
chr2 (1-136)||(24908107-24908242)
chr2 (1-100)||(25616216-25616315)
chr2 (1-136)||(23103351-23103485)
chr2 (1-142)||(28577127-28577267)
chr2 (1-142)||(45029848-45029988)
chr2 (1-136)||(7688-7823)
chr2 (1-92)||(22799125-22799216)
chr2 (1-47)||(8946688-8946734)
chr2 (1-142)||(24529522-24529663)
chr2 (1-137)||(38967402-38967538)
chr2 (1-136)||(19671861-19671995)
chr2 (8-92)||(23019705-23019789)
chr2 (1-96)||(28406007-28406103)
chr2 (59-142)||(24642850-24642933)
chr2 (1-46)||(22134251-22134296)
chr2 (1-57)||(23038058-23038114)
chr2 (1-33)||(23040247-23040279)
chr2 (1-96)||(25175881-25175976)
[»] chr3 (63 HSPs)
chr3 (1-207)||(17487887-17488093)
chr3 (1-206)||(13442305-13442510)
chr3 (1-205)||(20698322-20698525)
chr3 (1-207)||(17499369-17499575)
chr3 (1-207)||(12399240-12399446)
chr3 (1-200)||(26686918-26687117)
chr3 (1-200)||(43840963-43841162)
chr3 (1-205)||(23083247-23083451)
chr3 (8-205)||(14576719-14576915)
chr3 (1-201)||(14972885-14973085)
chr3 (1-205)||(14572620-14572823)
chr3 (1-185)||(24153115-24153298)
chr3 (1-186)||(42386441-42386627)
chr3 (1-201)||(18438565-18438765)
chr3 (1-201)||(25476275-25476475)
chr3 (1-201)||(11424653-11424849)
chr3 (93-207)||(16796670-16796784)
chr3 (1-201)||(40213611-40213810)
chr3 (1-204)||(30029871-30030073)
chr3 (93-191)||(14179555-14179653)
chr3 (1-137)||(29172582-29172717)
chr3 (1-142)||(7781341-7781481)
chr3 (1-142)||(8899122-8899262)
chr3 (1-142)||(9707601-9707741)
chr3 (1-142)||(17446649-17446789)
chr3 (1-142)||(17463206-17463346)
chr3 (1-142)||(17672654-17672794)
chr3 (1-142)||(38961885-38962025)
chr3 (1-142)||(45606901-45607041)
chr3 (1-142)||(50242850-50242990)
chr3 (1-136)||(34159354-34159488)
chr3 (1-136)||(55476519-55476653)
chr3 (1-142)||(12567588-12567728)
chr3 (1-142)||(13544053-13544193)
chr3 (1-142)||(43550472-43550613)
chr3 (1-117)||(28848630-28848745)
chr3 (1-137)||(53070652-53070787)
chr3 (1-136)||(16454281-16454415)
chr3 (1-142)||(6469128-6469268)
chr3 (5-142)||(10247717-10247853)
chr3 (1-142)||(16282805-16282945)
chr3 (1-136)||(13151790-13151925)
chr3 (1-136)||(13154255-13154390)
chr3 (1-142)||(41123918-41124055)
chr3 (1-100)||(46822296-46822395)
chr3 (1-100)||(12511088-12511187)
chr3 (1-87)||(55500970-55501055)
chr3 (93-194)||(12339890-12339986)
chr3 (1-76)||(15412457-15412531)
chr3 (1-104)||(15977543-15977645)
chr3 (1-116)||(36166626-36166739)
chr3 (1-76)||(8499546-8499620)
chr3 (1-76)||(12119785-12119859)
chr3 (1-116)||(21618477-21618590)
chr3 (1-70)||(44494837-44494905)
chr3 (1-136)||(24340678-24340813)
chr3 (1-136)||(52523682-52523819)
chr3 (1-46)||(13210371-13210417)
chr3 (63-136)||(2051154-2051227)
chr3 (1-93)||(14234518-14234610)
chr3 (1-89)||(15470955-15471043)
chr3 (1-33)||(14665428-14665460)
chr3 (8-114)||(53301527-53301634)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-205)||(3501-3705)
scaffold0292 (1-201)||(374-573)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-205)||(1882-2086)
[»] chr8 (50 HSPs)
chr8 (1-205)||(20536239-20536443)
chr8 (1-205)||(21918886-21919090)
chr8 (1-205)||(18818295-18818499)
chr8 (1-201)||(28648934-28649134)
chr8 (1-200)||(23406410-23406611)
chr8 (1-205)||(21923814-21924018)
chr8 (1-205)||(31971288-31971490)
chr8 (1-201)||(7372809-7373001)
chr8 (1-201)||(22626767-22626966)
chr8 (1-207)||(18879121-18879321)
chr8 (1-205)||(45130884-45131086)
chr8 (1-205)||(23648584-23648788)
chr8 (1-201)||(16092231-16092432)
chr8 (1-205)||(16199532-16199734)
chr8 (1-201)||(6759289-6759487)
chr8 (1-186)||(22875096-22875281)
chr8 (93-205)||(25363026-25363138)
chr8 (1-186)||(21389358-21389540)
chr8 (1-142)||(14409438-14409578)
chr8 (1-142)||(16413310-16413450)
chr8 (1-173)||(21778697-21778866)
chr8 (1-142)||(1484430-1484570)
chr8 (1-142)||(5853286-5853426)
chr8 (1-142)||(20403255-20403395)
chr8 (1-191)||(21395883-21396070)
chr8 (1-191)||(21790376-21790563)
chr8 (1-142)||(41598216-41598356)
chr8 (1-136)||(22001781-22001915)
chr8 (1-142)||(15203225-15203365)
chr8 (1-100)||(18678093-18678192)
chr8 (1-100)||(32121763-32121862)
chr8 (1-142)||(20046189-20046329)
chr8 (1-136)||(4483309-4483442)
chr8 (1-136)||(4542373-4542507)
chr8 (1-142)||(19896293-19896436)
chr8 (37-143)||(25484268-25484374)
chr8 (37-142)||(14823836-14823941)
chr8 (1-142)||(19801376-19801515)
chr8 (1-142)||(26223947-26224087)
chr8 (1-76)||(15070586-15070660)
chr8 (1-70)||(45290761-45290829)
chr8 (1-136)||(13508040-13508175)
chr8 (1-136)||(20498593-20498728)
chr8 (1-76)||(19937066-19937140)
chr8 (1-116)||(26219745-26219858)
chr8 (1-136)||(13597572-13597707)
chr8 (1-92)||(23776834-23776925)
chr8 (1-46)||(983450-983496)
chr8 (1-93)||(6520399-6520491)
chr8 (1-96)||(38855246-38855341)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-207)||(6005-6214)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-203)||(4880-5082)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-205)||(24187-24393)
[»] scaffold0088 (1 HSPs)
scaffold0088 (6-205)||(20946-21146)
[»] scaffold0145 (3 HSPs)
scaffold0145 (1-205)||(38792-38995)
scaffold0145 (1-182)||(32973-33153)
scaffold0145 (1-142)||(9777-9918)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-205)||(1983-2187)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-200)||(8424-8619)
[»] scaffold0175 (1 HSPs)
scaffold0175 (25-200)||(13147-13322)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-205)||(15351-15553)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-205)||(32098-32299)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-201)||(22914-23113)
[»] scaffold0021 (2 HSPs)
scaffold0021 (60-207)||(124675-124822)
scaffold0021 (1-135)||(174797-174930)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-207)||(25927-26132)
scaffold0026 (1-207)||(39889-40094)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-201)||(3041-3240)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-205)||(13528-13730)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-205)||(4743-4946)
scaffold0358 (37-205)||(3-170)
[»] scaffold0122 (3 HSPs)
scaffold0122 (1-201)||(25955-26155)
scaffold0122 (1-116)||(44682-44797)
scaffold0122 (106-201)||(33385-33480)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-205)||(8510-8710)
[»] scaffold0228 (3 HSPs)
scaffold0228 (7-201)||(4544-4738)
scaffold0228 (7-201)||(12126-12320)
scaffold0228 (7-201)||(22078-22272)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-201)||(39508-39707)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-201)||(75105-75304)
[»] scaffold0309 (1 HSPs)
scaffold0309 (29-205)||(6669-6845)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-201)||(39944-40143)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-205)||(10312-10513)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-173)||(3104-3276)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-201)||(17105-17307)
scaffold0056 (1-142)||(79278-79418)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-201)||(16490-16690)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1-201)||(339840-340037)
scaffold0003 (1-142)||(158444-158584)
scaffold0003 (19-145)||(71350-71474)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-205)||(16313-16514)
[»] scaffold0484 (1 HSPs)
scaffold0484 (93-205)||(1037-1149)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-102)||(28445-28546)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-189)||(954-1139)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-180)||(47026-47202)
[»] scaffold0327 (1 HSPs)
scaffold0327 (37-196)||(3424-3584)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-145)||(32904-33046)
scaffold0120 (1-145)||(45959-46101)
scaffold0120 (1-181)||(16144-16323)
[»] scaffold0106 (3 HSPs)
scaffold0106 (1-205)||(1320-1521)
scaffold0106 (1-205)||(7297-7498)
scaffold0106 (1-35)||(15294-15328)
[»] scaffold0023 (5 HSPs)
scaffold0023 (1-136)||(17440-17574)
scaffold0023 (1-142)||(94439-94579)
scaffold0023 (1-117)||(44482-44598)
scaffold0023 (1-97)||(100405-100501)
scaffold0023 (1-92)||(38478-38569)
[»] scaffold0130 (1 HSPs)
scaffold0130 (51-201)||(27911-28061)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-205)||(5017-5218)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-92)||(11442-11533)
scaffold0235 (154-205)||(11399-11450)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-201)||(4555-4754)
[»] scaffold0761 (1 HSPs)
scaffold0761 (1-142)||(4325-4465)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-142)||(4722-4862)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-142)||(20775-20915)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-142)||(37849-37989)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-142)||(82100-82240)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-142)||(11316-11456)
[»] scaffold0165 (3 HSPs)
scaffold0165 (129-205)||(3640-3716)
scaffold0165 (129-205)||(7704-7780)
scaffold0165 (1-173)||(27666-27839)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-189)||(51613-51798)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-142)||(10801-10941)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-142)||(13975-14115)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-142)||(16812-16952)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-142)||(501112-501252)
scaffold0001 (1-142)||(85573-85714)
scaffold0001 (1-46)||(160715-160761)
[»] scaffold1439 (1 HSPs)
scaffold1439 (2-142)||(135-274)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-117)||(13420-13535)
[»] scaffold0107 (1 HSPs)
scaffold0107 (46-145)||(15362-15461)
[»] scaffold0028 (5 HSPs)
scaffold0028 (1-136)||(134239-134373)
scaffold0028 (1-136)||(136708-136842)
scaffold0028 (1-136)||(139177-139311)
scaffold0028 (1-136)||(144115-144249)
scaffold0028 (1-136)||(141646-141780)
[»] scaffold0395 (1 HSPs)
scaffold0395 (47-181)||(873-1006)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-117)||(8497-8613)
scaffold0621 (1-96)||(6566-6661)
[»] scaffold0494 (1 HSPs)
scaffold0494 (2-142)||(12243-12382)
[»] scaffold0031 (2 HSPs)
scaffold0031 (44-136)||(128824-128916)
scaffold0031 (1-142)||(20373-20512)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-142)||(9270-9410)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-142)||(29960-30100)
[»] scaffold0044 (1 HSPs)
scaffold0044 (3-136)||(40430-40562)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-136)||(53504-53639)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-136)||(8014-8151)
[»] scaffold0394 (1 HSPs)
scaffold0394 (37-142)||(12121-12226)
[»] scaffold0352 (1 HSPs)
scaffold0352 (150-205)||(17873-17928)
[»] scaffold0215 (1 HSPs)
scaffold0215 (1-145)||(26855-26996)
[»] scaffold0101 (1 HSPs)
scaffold0101 (1-142)||(1274-1415)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-142)||(161083-161224)
[»] scaffold0819 (1 HSPs)
scaffold0819 (1-137)||(4242-4378)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-78)||(29121-29198)
[»] scaffold0205 (1 HSPs)
scaffold0205 (8-135)||(29592-29720)
[»] scaffold0084 (1 HSPs)
scaffold0084 (130-201)||(10323-10394)
[»] scaffold2014 (1 HSPs)
scaffold2014 (1-96)||(1063-1158)
[»] scaffold0247 (1 HSPs)
scaffold0247 (3-142)||(2122-2261)
[»] scaffold0357 (2 HSPs)
scaffold0357 (1-173)||(13159-13333)
scaffold0357 (1-173)||(16017-16190)
[»] scaffold0093 (1 HSPs)
scaffold0093 (1-92)||(4803-4894)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-116)||(116458-116571)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-114)||(38679-38792)
[»] scaffold0555 (1 HSPs)
scaffold0555 (2-117)||(10516-10630)
[»] scaffold0461 (1 HSPs)
scaffold0461 (1-136)||(11495-11630)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-136)||(12599-12733)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-136)||(38211-38346)
[»] scaffold0012 (1 HSPs)
scaffold0012 (45-136)||(225482-225572)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-141)||(16299-16438)
[»] scaffold0305 (1 HSPs)
scaffold0305 (162-207)||(20595-20640)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-117)||(129936-130051)
scaffold0010 (1-117)||(60689-60806)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-96)||(2801-2896)
[»] scaffold0261 (1 HSPs)
scaffold0261 (3-46)||(15694-15738)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-57)||(23870-23926)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-96)||(19295-19390)


Alignment Details
Target: chr1 (Bit Score: 175; Significance: 2e-94; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 27250819 - 27250621
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
27250819 catgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 27250720  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
27250719 atattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagt 27250621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 21026711 - 21026917
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||||||||    
21026711 catgcagcttagttaaataacaacagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaacatcttaaatattcaa 21026810  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||| |  |||||||||| |||||||||||||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||    
21026811 ataattctcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctcttcattaagtc 21026910  T
201 ttaatgc 207  Q
    |||||||    
21026911 ttaatgc 21026917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 47 - 205
Target Start/End: Complemental strand, 22354616 - 22354458
Alignment:
47 aacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataatcag 146  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||||||||     
22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgtatataacattatatcacatcataatcaa 22354517  T
147 caacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaat 205  Q
    || |||||||||||||||||||||||| |||||||||||| || |||||||||||||||    
22354516 catcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaat 22354458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 22532308 - 22532500
Alignment:
9 ttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattatt 108  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||   || |||    
22532308 ttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaacaacatcttaaatattcattcataatt 22532407  T
109 caagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtct 201  Q
    ||||||||| | | |||||||||||||| |||||||| || ||||||||||||||||||||||||  | |||| |||| || |||||||||||    
22532408 caagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagttcataaataacatcatcattaagtct 22532500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 50210303 - 50210103
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||||| ||||| ||| |||||||| || ||| ||     
50210303 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacat 50210204  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||  |  |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
50210203 tcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtc 50210104  T
201 t 201  Q
    |    
50210103 t 50210103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 34509811 - 34510011
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| ||||||| ||||| ||| ||||||||||| ||| ||     
34509811 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatcttaattatacat 34509910  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      ||   ||||||||||  || |||||||||||||| |||| ||| || |||||||||||||||||||||| | |||||||||||| || ||||||||||    
34509911 tcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagattataattaacatcatcattaagtc 34510010  T
201 t 201  Q
    |    
34510011 t 34510011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 22468786 - 22468604
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||||||||||||||||||||| ||  ||||| ||||||||||| | |||||||||||||||||||| ||||||||||| ||||| |    
22468786 catgcaacttagttaaataacaatagcaacataggcagattacaacaacagcatgacatcataatatcaattgcaattcaacaacatcttaattattc-a 22468688  T
101 atattat-tcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataatta 184  Q
    ||| ||| |||||||||| | | |||||||||||||| |||||| | || || ||||||||||||||||||||| ||||||||||    
22468687 ataatatctcaagtaatgcacataacattatatcacatcataatta-catcagcacatcttaaacagcttcacagattataatta 22468604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 20135218 - 20135420
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||| |||||||||| |||||| ||  ||||| |||| |||||| |||||||||||  ||||||||| ||||||||||| |||||||    
20135218 catgcaacttagttaaacaacaatagcagcataggcagattacaacaacatcatgacataataatatcatgtgcaattcaacaacatcttaagtattcaa 20135317  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      |   ||||||||||| ||| |||||||||||| | |||||| | || |||||||||||||||||||||||| ||||||||||||  | |||||| |||    
20135318 taaaacttcaagtaatgcatacaacattatatcatatcataatgaacatcaacacatcttaaacagcttcacagattataattaacaacatcattaggtc 20135417  T
201 tta 203  Q
    |||    
20135418 tta 20135420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 22356185 - 22356058
Alignment:
81 tcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataatcag-caacaacacatcttaaacagcttcacatattat 179  Q
    |||||||| |||||||||||| ||| ||||||||||| | | |||||||||||||| ||||||||  || |||||||||||||| ||||||||| |||||    
22356185 tcaacatcataaatattcaaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattat 22356086  T
180 aattaacctcttcattaagtcttaatgc 207  Q
    ||||||| || |||||||||||||||||    
22356085 aattaacatcatcattaagtcttaatgc 22356058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 22357871 - 22357744
Alignment:
81 tcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataatcag-caacaacacatcttaaacagcttcacatattat 179  Q
    |||||||| |||||||||||| ||| ||||||||||| | | |||||||||||||| ||||||||  || |||||||||||||| ||||||||| |||||    
22357871 tcaacatcataaatattcaaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattat 22357772  T
180 aattaacctcttcattaagtcttaatgc 207  Q
    ||||||| || |||||||||||||||||    
22357771 aattaacatcatcattaagtcttaatgc 22357744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 38801478 - 38801277
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  ||||||||||| ||| | |||   ||||| ||| |||| ||||||| | |||||||||||||| ||| |||| ||    
38801478 catgcagcttagttaaataacaaacagcaacataggcagtgtgcaa---cagcaagacataattatatcaaattcaattcatcaacatattatatataca 38801382  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    | |||| ||||||||||| ||||| ||||||| |||| | |||||| |||||||| ||||||  |||||||||| |||||| |||| ||| | |||||||    
38801381 attattcttcaagtaatgcataaa-cattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaattatagttaatctcattattaagt 38801283  T
200 cttaat 205  Q
    ||||||    
38801282 cttaat 38801277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 48603637 - 48603735
Alignment:
93 atattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctctt 191  Q
    ||||||||||| |  |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||    
48603637 atattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttctt 48603735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 45574977 - 45574836
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||| ||| ||||| ||| |||| ||| || |||| |     
45574977 catgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataataccaaatgcaagtcaacaacgtctcaattattaac 45574878  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
45574877 atataattcaagtaatgcatatacaattatatcacaatataa 45574836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13988894 - 13989034
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
13988894 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 13988992  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
13988993 atataattcaagtaatgcatatacaattatatcacaatataa 13989034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21475221 - 21475081
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
21475221 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 21475123  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
21475122 atataattcaagtaatgcatatacaattatatcacaatataa 21475081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21923425 - 21923285
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
21923425 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 21923327  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
21923326 atataattcaagtaatgcatatacaattatatcacaatataa 21923285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 23593869 - 23593729
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
23593869 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23593771  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
23593770 atataattcaagtaatgcatatataattatatcacaatataa 23593729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 31612341 - 31612481
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||||||| |  ||||||     
31612341 catgcagcttagttaaataacaacagcaacacaat-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcagttattcac 31612439  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
31612440 atataattcaagtaatgcatatacaattatatcacaatataa 31612481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21840795 - 21840935
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
21840795 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 21840893  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| ||| |||||||| ||| |  |||||||||||| ||||    
21840894 atataatttaagtaatgcatatataattatatcacaatataa 21840935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 433040 - 433178
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||||||||    |||||| ||| |||||||||||||| || ||| |||||||||||| ||||| ||| |||||||| || ||||||     
433040 catgcagcttagttaaataacg---gcaacacaggcagtatacaaaaacatcaagacataataatatcaaatgcaagtcaacaacatctcaattattcac 433136  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
433137 atataattcaagtaatgcatatacaattatatcacaatataa 433178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 29298165 - 29298305
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||  |||||||||||| ||||| ||| |||| ||| || ||||||     
29298165 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgaa-taataatatcaaatgcaagtcaacaacgtctcaattattcac 29298262  T
101 atattattcaagtaatgaataaaacattatatcacaacataat 143  Q
    |||| |||||||||||| ||| |  |||||||||||| |||||    
29298263 atataattcaagtaatgcatatacaattatatcacaatataat 29298305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 29776716 - 29776856
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||||| | |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
29776716 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaataacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 29776814  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
29776815 atataattcaagtaatgcatatacaattatatcacaatataa 29776856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 16275491 - 16275357
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattcaaatatta 106  Q
    |||||||||||||||| | | ||||||  ||||||||||||||||||||| |||||||||||||||||| || |||||| ||| || |||||| |||  |    
16275491 cttagttaaataacaacaacgacatagc-agtatacaaaaacagcatgacataataatatcaattgcaagtcaatcaacgtctcaattattcacataaaa 16275393  T
107 ttcaagtaatgaataaaacattatatcacaacataa 142  Q
    ||||| ||||| ||| | ||||||||||||| ||||    
16275392 ttcaattaatgcatataccattatatcacaatataa 16275357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 33797595 - 33797694
Alignment:
46 aaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataatca 145  Q
    ||||| |||||| |||||||||||||| ||||||| ||||||||| |||||||||||| |  | |||||||| ||||||||||||||||||  |||||||    
33797595 aaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattcttaagtaatgcataaaacattatatcacattataatca 33797694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 16361945 - 16362085
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||| | ||||||| |   |||||| ||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
16361945 catgcagcttagttaaataacgacagcaacacaac-agtatataaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 16362043  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    | || |||||||||||| ||| |  |||||||||||| ||||    
16362044 aaataattcaagtaatgcatatataattatatcacaatataa 16362085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21861660 - 21861525
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||| |||  |||||  ||||||||||| ||||| ||||| ||||||||  ||| |||||||| ||||| |||||||||||| ||| |||||    
21861660 catgcagcttagctaataaacaaacagcaacataggcagtatgcaaaa-cagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattca 21861562  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
21861561 tatataattcaagtaatgtatatacaattatatcaca 21861525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21896346 - 21896211
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||| |||||||||  |||||  ||||||||||| ||||||||||| ||||||||  ||| |||||||| ||||| |||||||||||| ||| |||||    
21896346 catgcaacttagttaataaacaaacagcaacataggcagtatacaaaa-cagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattca 21896248  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| ||||| |||||| ||| |  |||||||||||    
21896247 tatataattcatgtaatgtatatacaattatatcaca 21896211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20847244 - 20847175
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaa 70  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||| ||||||||| |||  |||||||    
20847244 catgcagcttagttaaataacaacagcaacataggcagtacacaaaatcagcatgacataaatatatcaa 20847175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 13212996 - 13212855
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||  |   |||||||||||||| |||||| |||||||||||| ||||| || |||||| ||| || ||||||    
13212996 catgcagcttagttaaataacaacagcgacgcaac-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 13212898  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     | || |||||| ||||| ||| |  |||||||||||| ||||    
13212897 caaataattcaattaatgcatatacaattatatcacaatataa 13212855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21346989 - 21347130
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| |   ||| ||  |||||||||||||| |||||| |||||||||||| ||||| || |||||| ||| || ||||||    
21346989 catgcagcttagttaaataacaacaaagacacagc-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 21347087  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     | || |||||| ||||| ||| |  |||||||||||| ||||    
21347088 caaataattcaattaatgcatatacaattatatcacaatataa 21347130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 21788132 - 21787979
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||||||| |||||| |||||| ||   |||| ||||||||||| |  ||||||||||| || |||| |||||||||||  |||| |    
21788132 catgcaacttagttaaataaccatagcagcataggcagatcacaacaacagcatgacttcgtaatatcaatttcatttcaacaacatcttaatcattc-a 21788034  T
101 atattat-tcaagtaatgaataaaacattatatcacaacataatcagcaacaaca 154  Q
    ||| ||| | |||||||| | | |||||||||| ||| |||||||| || |||||    
21788033 ataatatcttaagtaatgcacataacattatataacatcataatcaacatcaaca 21787979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 22123202 - 22123061
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||||| |||  ||||||| |   |||||||||||| |||||||| |||||||||||| ||||| ||| |||  ||| || ||||||    
22123202 catgcagcttagttaaatagcaaacagcaacacaac-agtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaatgtctcaattattca 22123104  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     || | |||||||||||| ||| |  |||||||||||| ||||    
22123103 catttaattcaagtaatgcatatacaattatatcacaatataa 22123061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 40389217 - 40389323
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcac 135  Q
    ||||||||||||||||||||| |||||||||||| ||||| || |||| | ||| || |||||| |||| |||||| ||||| ||| |  ||||||||||    
40389217 agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcatcgtctcaattattcacatataattcaattaatgcatatacaattatatcac 40389316  T
136 aacataa 142  Q
    || ||||    
40389317 aatataa 40389323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21707195 - 21707335
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||| |   |||||||||||| ||||||||  ||||||||||| ||||| ||| |||| ||| || ||||||     
21707195 catgcagcttagttaaataacaacaacaacacaat-agtatacaaaaaaagcatgacagaataatatcaaatgcaagtcaacaacgtctcaattattcac 21707293  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| | ||| ||||||  || |  |||||||||||| ||||    
21707294 atataaatcatgtaatgcctatacaattatatcacaatataa 21707335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21711737 - 21711877
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||| |   |||||||||||| ||||||||  ||||||||||| ||||| ||| |||| ||| || ||||||     
21711737 catgcagcttagttaaataacaacaacaacacaat-agtatacaaaaaaagcatgacagaataatatcaaatgcaagtcaacaacgtctcaattattcac 21711835  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| | ||| ||||||  || |  |||||||||||| ||||    
21711836 atataaatcatgtaatgcctatacaattatatcacaatataa 21711877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 15860143 - 15860052
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaa 92  Q
    ||||||||||||||||||||||| ||| ||| ||  |||||||||||||| |||||| ||||||||| || ||||| || |||||| ||||||    
15860143 catgcagcttagttaaataacaacagcgacacagc-agtatacaaaaacaacatgacataataatattaaatgcaagtcaatcaacgtcttaa 15860052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 20847163 - 20847103
Alignment:
148 aacaacacatctt-aaacagcttcacatattataattaacctcttcattaagtcttaatgc 207  Q
    ||||||||||||| ||||||||||| | |||||  ||||||||||||||||||||||||||    
20847163 aacaacacatctttaaacagcttcatagattatggttaacctcttcattaagtcttaatgc 20847103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21342124 - 21342265
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| |   ||| ||  |||||||||||||| |||||| |||||||||||| ||||| || |||||| ||| || ||||||    
21342124 catgcagcttagttaaataacaacaaagacacagc-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 21342222  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     | || |||||| ||||| ||| |  |||| ||||||| ||||    
21342223 caaataattcaattaatgcatatacaattacatcacaatataa 21342265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35261168 - 35261055
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||  |||||  ||||||||||| ||||| ||||| ||||||||  ||| |||||||| |||||   |||||||||| ||| |||||    
35261168 catgcagcttagttaataaacaaacagcaacataggcagtatgcaaaa-cagcatgatataacaatatcaaatgcaa---atcaacatctcaaacattca 35261073  T
100 aatattattcaagtaatg 117  Q
     | || ||||||||||||    
35261072 tacataattcaagtaatg 35261055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 20454643 - 20454609
Alignment:
1 catgcagcttagttaaataacaatagcaacatagg 35  Q
    ||||||||||||||||||||||| |||||||||||    
20454643 catgcagcttagttaaataacaacagcaacatagg 20454609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21714573 - 21714629
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgac 57  Q
    |||||||||| ||||||||||||||||| |||||| ||  ||||| ||||| |||||    
21714573 catgcagcttggttaaataacaatagcagcataggcagattacaacaacagtatgac 21714629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 3e-93; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 12902788 - 12902992
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
12902788 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatcaacatcttaaatattcaa 12902887  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
12902888 atattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtc 12902987  T
201 ttaat 205  Q
    |||||    
12902988 ttaat 12902992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 7088908 - 7089114
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
7088908 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttacatattcaa 7089007  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
7089008 atattattcaagtaatgcataaaacattatatcacatcataattagcaacaacacatcttaaacaacttcacagattataattaacctcttcattaagtc 7089107  T
201 ttaatgc 207  Q
    |||||||    
7089108 ttaatgc 7089114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 44052860 - 44053066
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
44052860 catgcagctcagttaaataacaacatcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 44052959  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| |||||||||||   | |||||||||||||| |||||||| || || ||||||||||||||||||||| |||||||||||| || ||||||||||    
44052960 atattcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatcttaaacagcttcacagattataattaacatcatcattaagtc 44053059  T
201 ttaatgc 207  Q
    |||||||    
44053060 ttaatgc 44053066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 23374449 - 23374243
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||  ||||||||||||||||| |||||||||||||||||||    
23374449 catgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaa 23374350  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||| |  |||||||||| |||||||||||||||||| |||||||| |||||||| |||||||| ||||||| | |||||| |||||||||||||||||||    
23374349 ataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagattatagttaacctcttcattaagtc 23374250  T
201 ttaatgc 207  Q
    |||||||    
23374249 ttaatgc 23374243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22636466 - 22636669
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
22636466 catgcagcttagttaaataacaacaacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 22636565  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| ||| |||||||||||||| |||||||  || ||||||||||| |||||||||||| |||||||||||| || || |||||||    
22636566 atattcttcaagtaatgcatataacattatatcacatcataatcgacatcaacacatctt-aacagcttcacagattataattaacatcctcgttaagtc 22636664  T
201 ttaat 205  Q
    |||||    
22636665 ttaat 22636669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 7893734 - 7893935
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||    
7893734 catgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaa 7893833  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | | |||||| ||||| |||||||||   |||||||||||||||||||||||| |||||||||||| || || |||||||    
7893834 ttatacttcaagtaatgcacataccattatttcacatcataatcag---caacacatcttaaacagcttcacagattataattaacatcatcgttaagtc 7893930  T
201 ttaat 205  Q
    |||||    
7893931 ttaat 7893935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 16270325 - 16270145
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||| | | |||||||||||||||||||    
16270325 catgcagcttaattaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaa 16270227  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataat 182  Q
     |||  ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||||| ||||||||    
16270226 ttatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataat 16270145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16240059 - 16239856
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||| ||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||| ||||| ||| |||||||||||||||||||    
16240059 catgcaacttaattaaataacaatagcaaaataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaa 16239961  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  || |||||||| | | |||||||||||| | |||||||| || ||||||||||||||||||||| || |||||||||||| || ||||||||||    
16239960 ttatactttaagtaatgcaaataacattatatcatatcataatcaacatcaacacatcttaaacagcttcgcagattataattaacatcatcattaagtc 16239861  T
201 ttaat 205  Q
    |||||    
16239860 ttaat 16239856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 7798805 - 7798958
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
7798805 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatcaacatcttaaatattcaa 7798904  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaaca 154  Q
     |||  ||||||||||| | | |||||| |||||||||||||||| || |||||    
7798905 ttatacttcaagtaatgcacataacattgtatcacaacataatcaacatcaaca 7798958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 16377611 - 16377413
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||| |||||||||||| ||||| ||| |||||||| || ||| ||     
16377611 catgcagcttagttaaataacaacagcaacataggcagtatacaaa--cagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacat 16377514  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||  || |||||||||||||| |||||||| || |||| |||||||||||||| |||| |||||||||||| || ||||||||||    
16377513 tcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacgcatcttaaacagctccacagattataattaacatcatcattaagtc 16377414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 14038679 - 14038879
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| | | |||||||||||||| |||| | |||||||||||| ||||| ||| |||||||| || ||| ||     
14038679 catgcagcttagttaaataacaacagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaacaacatctcaattatacat 14038778  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      ||  ||||||||||| | | |||||||||||||| |||||||| || |||||||| ||||||||||||||| |||||||||||  || ||||||||||    
14038779 tcatatttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagattataattaatatcatcattaagtc 14038878  T
201 t 201  Q
    |    
14038879 t 14038879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 14053391 - 14053188
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacat-cttaaatattc 98  Q
    |||||| ||||||||||||||||  | || |||||  ||||||||||  ||||||||| |||||||||||||| |||||||||||||| ||||   || |    
14053391 catgcaacttagttaaataacaaacaacagcatagacagtatacaaa--cagcatgacataataatatcaatttcaattcatcaacattcttatgcatac 14053294  T
99 aaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaag 198  Q
    ||||||| ||||||||||| ||||| |||||||||||| |||||||| |||||||| |||||| || |||||||| ||||||||||||||| |  |||||    
14053293 aaatattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacaacatatcttatacggcttcacagattataattaacctcattgttaag 14053195  T
199 tcttaat 205  Q
    |||||||    
14053194 tcttaat 14053188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 3096759 - 3096872
Alignment:
85 catcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataatta 184  Q
    |||| |||||||||||||||| ||||||||||| ||||| |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||    
3096759 catcataaatattcaaatattcttcaagtaatgcataaa-cattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatattataatta 3096857  T
185 acctcttcattaagt 199  Q
    ||||| |||||||||    
3096858 acctcatcattaagt 3096872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 17046518 - 17046719
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  ||||||||||| |||||| || ||||   |||| |||| ||||||| | ||||||||||||||||||  ||| ||    
17046518 catgcagcttagttaaataacaaacagcaacataggtagtatagaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtataca 17046614  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    || ||| ||||||||||| ||||| ||||||| |||| | |||||| |||||||| ||||||  |||||||||| ||||||||||||||  | |||||||    
17046615 aacattcttcaagtaatgtataaa-cattataacacatcttaatcaacaacaacatatcttattcagcttcacagattataattaaccttattattaagt 17046713  T
200 cttaat 205  Q
    ||||||    
17046714 cttaat 17046719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 52873457 - 52873363
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaata 95  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||||    
52873457 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaata 52873363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 6899922 - 6900062
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| || |||  | |||||||||||| ||||| ||| |||||||||||||||||||    
6899922 catgcatcttagttaaataacaatagcaacataggcagtatacaaaa-caacatagcataataatatcaaatgcaagtcaacaacatcttaaatattcaa 6900020  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||  ||||||||||| | | |||||||||||||| |||||    
6900021 ttatacttcaagtaatgtacataacattatatcacatcataa 6900062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 17048070 - 17047958
Alignment:
93 atattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttc 192  Q
    ||||||||||| |  |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||  || ||||||  ||||||    
17048070 atattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacaggttgtaattagtctcttc 17047971  T
193 attaagtcttaat 205  Q
    |||||||||||||    
17047970 attaagtcttaat 17047958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 18215408 - 18215268
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
18215408 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18215310  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
18215309 atataattcaagtaatgcatatacaattatatcacaatataa 18215268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 23803399 - 23803259
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
23803399 catgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctaaattattcac 23803301  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
23803300 atataattcaagtaatgcatatataattatatcacaatataa 23803259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 44929014 - 44928873
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| | | ||||||||||||||||||||| ||||||| |||| ||||| |||  ||||||| || ||||||     
44929014 catgcagcttagttaaataacaacagcaacacaagcagtatacaaaaacagcatgacataataatgtcaaatgcaagtcaataacatctcaattattcac 44928915  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
44928914 atataattcaagtaatgcatatacaattatatcacaatataa 44928873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 12441 - 12301
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
12441 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 12343  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
12342 atataattcaagtaatgcatatacaattatatcacaatataa 12301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15118486 - 15118346
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
15118486 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 15118388  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
15118387 atataattcaagtaatgcatatacaattatatcacaatataa 15118346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 51464002 - 51463862
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
51464002 catgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 51463904  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||| ||||| ||| |  |||||||||||| ||||    
51463903 atataattcaaataatgcatatataattatatcacaatataa 51463862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 52312538 - 52312678
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
52312538 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 52312636  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
52312637 atataattcaagtaatgcatatacaattatatcacaatataa 52312678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 3515035 - 3515175
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||| ||||| ||||||| ||  ||||||||||||||||| ||| |||||||||||| ||||| ||| |||| ||| || ||||||     
3515035 catgcagcttagttaaaaaacaacagcaacacagc-agtatacaaaaacagcaagacataataatatcaaatgcaagtcaacaacgtctcaattattcac 3515133  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
3515134 atataattcaagtaatgcatatataattatatcacaatataa 3515175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 19242727 - 19242867
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
19242727 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 19242825  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
19242826 atataattcaagtaatgcatatataattatatcacaatataa 19242867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19618306 - 19618166
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
19618306 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 19618208  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     ||| |||||||||||| ||| |  |||||||||||| ||||    
19618207 ctataattcaagtaatgcatatataattatatcacaatataa 19618166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 44773221 - 44773081
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
44773221 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 44773123  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    | || |||||||||||| ||| |  |||||||||||| ||||    
44773122 aaataattcaagtaatgcatatacaattatatcacaatataa 44773081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 1837643 - 1837509
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||| ||| ||||| ||| |||| ||| || ||||||     
1837643 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataataccaaatgcaagtcaacaacgtctcaattattcac 1837545  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
1837544 atataattcaagtaatgcatatacgattatatcaca 1837509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 44615316 - 44615450
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||| |||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
44615316 catgcagcttagttaaataacaacagcaacacaac-agtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 44615414  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
44615415 atataattcaagtaatgcatatacaattatatcaca 44615450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 50222473 - 50222339
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   | ||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
50222473 catgcagcttagttaaataacaacagcaacacaac-attatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 50222375  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
50222374 atataattcaagtaatgcatatacaattatatcaca 50222339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 54798844 - 54798729
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||| |||||||| ||||||| | | ||||||||||||||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
54798844 catgcagcttagttgaataacaacagcaacacaagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 54798745  T
101 atattattcaagtaat 116  Q
      || |||||||||||    
54798744 tcataattcaagtaat 54798729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15355459 - 15355318
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| ||  ||||||||||||||||||||| |||||||||||| ||||| || |||||| ||| || ||||||    
15355459 catgcagcttagttaaataacaacagcgacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15355361  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||||| ||| |  |||||||||||| ||||    
15355360 catataattcaattaatgcatatacaattatatcacaatataa 15355318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 14970841 - 14970701
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||| | ||  | ||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
14970841 catgcagcttagttaaataacaacagcaaaacagcaa-tatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 14970743  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||  ||| |  |||||||||||| ||||    
14970742 atataattcaagtaatacatatataattatatcacaatataa 14970701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 44102242 - 44102382
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| |  |||| ||  ||||||||||||||||||||| |||||||||||| ||||| | | |||| ||| || ||||||     
44102242 catgcagcttagttaaataacaacaataacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaagtaaacaacgtctcaattattcac 44102340  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
44102341 atataattcaagtaatgcatatacaattatatcacaatataa 44102382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18239553 - 18239438
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| |||| || |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
18239553 catgcagcttagttaaataacaacagcagcacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18239455  T
101 atattattcaagtaatg 117  Q
    |||| ||||||||||||    
18239454 atataattcaagtaatg 18239438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14280344 - 14280438
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatat 96  Q
    ||||||||||||||||||||||| |||||||  || |||||||||||||| |||||| |||||||||||| ||||| ||| |||||||| ||||||    
14280344 catgcagcttagttaaataacaacagcaacac-ggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatat 14280438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 13941 - 13806
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||  |||||  ||||||||||| ||||| ||||| || |||||  ||| |||||||| ||||| |||||||||||| |||||||||    
13941 catgcagcttagttaataaacaaacagcaacataggcagtatgcaaaa-caacatgatataacaatatcaaatgcaagtcatcaacatctcaaatattca 13843  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
13842 tatataattcaagtaatgtatatacaattatatcaca 13806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3096324 - 3096384
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaa 61  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||    
3096324 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgatgtaa 3096384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 12610978 - 12611111
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |        |||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
12610978 catgcagcttagttaaataacaacagcaacaca--------acaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 12611069  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
12611070 atataattcaagtaatgcatatataattatatcacaatataa 12611111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15367721 - 15367862
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||||||||||||| |||||||||||| ||||| || |||||| ||| || ||||||    
15367721 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15367819  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||| | ||| |  |||||||||||| ||||    
15367820 catataattcaactaacgcatatacaattatatcacaatataa 15367862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15402734 - 15402875
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||||||||||||| |||||||||||| ||||| || |||||| ||| || ||||||    
15402734 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15402832  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||| | ||| |  |||||||||||| ||||    
15402833 catataattcaactaacgcatatacaattatatcacaatataa 15402875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15370049 - 15370159
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||||||||||||| |||||||||||| ||||| || |||||| ||| || ||||||    
15370049 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15370147  T
100 aatattattcaa 111  Q
     |||| ||||||    
15370148 catataattcaa 15370159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 21815717 - 21815587
Alignment:
3 tgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaat 102  Q
    ||||||||||||||||||| | ||||||| |    |||||||||||||||||||| ||||||||| || ||||| ||| |||| ||| || |||||| ||    
21815717 tgcagcttagttaaataacgacagcaacacaact-gtatacaaaaacagcatgacataataatataaaatgcaagtcaacaacgtctcaattattcacat 21815619  T
103 attattcaagtaatgaataaaacattatatca 134  Q
    || |||||||||||| ||| |  |||||||||    
21815618 ataattcaagtaatgcatatacaattatatca 21815587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 43256230 - 43256106
Alignment:
19 aacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatga 118  Q
    ||||| ||||||||||| || |||| ||  || |||||| |||||||||||||| ||||||| ||||||||| |||||||||||| |  | ||||||||     
43256230 aacaacagcaacataggcagcataccaa--caacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattcttaagtaatgc 43256133  T
119 ataaaacattatatcacaacataatca 145  Q
    ||| || |||||||||||  |||||||    
43256132 atataatattatatcacattataatca 43256106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15371233 - 15371374
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||||||||||||| |||||||||||| ||||| || |||||  ||| || ||||||    
15371233 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaatgtctcaattattca 15371331  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||| | ||| |  |||||||||||| ||||    
15371332 catataattcaactaacgcatatacaattatatcacaatataa 15371374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15373514 - 15373655
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||||||||||||| |||||||||||| ||||| || |||||  ||| || ||||||    
15373514 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaatgtctcaattattca 15373612  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||| | ||| |  |||||||||||| ||||    
15373613 catataattcaactaacgcatatacaattatatcacaatataa 15373655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22353864 - 22354005
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||| |||||||||| |||| |||||| ||  |  |  |||| |||||| ||| |||||||||| ||||||| |||| ||| || ||||||     
22353864 catgcagcttaggtaaataacaacagcagcataggcagattgtagcaacaacatgacataacaatatcaattacaattcaacaacgtctcaattattcac 22353963  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
22353964 atataattcaagtaatgcatatacaattatatcacaatataa 22354005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16223563 - 16223673
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||||||||||||| |||||||||| | ||||| || |||||| ||| || ||||||    
16223563 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatctaatgcaagtcaatcaacgtctcaattattca 16223661  T
100 aatattattcaa 111  Q
     |||| ||||||    
16223662 catataattcaa 16223673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 20149892 - 20149998
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcac 135  Q
    ||||||||||||||||||||| |||||||||||| ||||| || |||| | ||| || |||||| |||| |||||| ||||| ||| |  ||||||||||    
20149892 agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcatcgtctcaattattcacatataattcaattaatgcatatacaattatatcac 20149991  T
136 aacataa 142  Q
    || ||||    
20149992 aatataa 20149998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 7641286 - 7641186
Alignment:
42 acaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacata 141  Q
    ||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || |||| | |||| |||||||||||| ||| |  |||||||||||| |||    
7641286 acaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattatttacatataattcaagtaatgcatatacaattatatcacaatata 7641187  T
142 a 142  Q
    |    
7641186 a 7641186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 8574957 - 8574844
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||| || |||||| |||||||||||| || |||||| |||||||| |||||| ||     
8574957 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaa-caacatgacataataatatcaaatgtaattcaacaacatctcaaatatacat 8574860  T
101 atattattcaagtaat 116  Q
      || |||||||||||    
8574859 tcataattcaagtaat 8574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 43198645 - 43198508
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacag-catgacgtaataatatcaattgcaattcatcaacatcttaaatattc 98  Q
    |||||||||||||||||||||||  ||||||||||  | ||| |||||  |  |||||  |||  ||||||| ||||| ||||||| |||| ||||||||    
43198645 catgcagcttagttaaataacaaacagcaacatagacaatatgcaaaacaattcatgatataaccatatcaaatgcaagtcatcaatatctcaaatattc 43198546  T
99 aaatattattcaagtaatgaataaaacattatatcaca 136  Q
    | |||| |||||||||||| ||| |  |||||||||||    
43198545 atatataattcaagtaatgtatatacaattatatcaca 43198508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 15093802 - 15093942
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||| |||||||||| |||||  ||   |||| ||||||||||| | |||||||||||| || |||  |||||| ||||  |||| |    
15093802 catgcaacttagttaaagaacaatagcagcatagaaagatcacaacaacagcatgacttcataatatcaatttcatttctacaacatattaatcattc-a 15093900  T
101 atattat-tcaagtaatgaataaaacattatatcacaacata 141  Q
    ||| ||| | |||||||| | | |||||||||||||| ||||    
15093901 ataatatattaagtaatgcacataacattatatcacatcata 15093942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 20361050 - 20360846
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
20361050 catgcagcttagttaaataacaacagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 20360951  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
20360950 atattcttcaagtaatgcatataacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctcatcattaagtc 20360851  T
201 ttaat 205  Q
    |||||    
20360850 ttaat 20360846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 20638373 - 20638168
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||||||||    
20638373 catgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaatttatcaacatctttaatattcaa 20638274  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    | ||| ||||||||||| ||||||| |||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
20638273 acattcttcaagtaatgcataaaacgttatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtc 20638174  T
201 ttaatg 206  Q
    ||||||    
20638173 ttaatg 20638168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 17287886 - 17287680
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||||||||| ||| || ||||||||||||||||    
17287886 catgcagcttagttaaataacaacagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaa 17287787  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | |||||||| ||| |||||||||| |  ||||||||||||||||||||||||  ||||||||||| || ||||||||||    
17287786 ttatacttcaagtaatgcacataacattatgtcataacataatcaacctcaacacatcttaaacagcttcacaggttataattaacatcctcattaagtc 17287687  T
201 ttaatgc 207  Q
    | |||||    
17287686 tcaatgc 17287680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 22780317 - 22780116
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| |  |||||||| | |||||||||||||| |||| |||||||||||||||||| ||| || ||||||||||||||||    
22780317 catgcagcttagttaaataacaacaaaaacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaatattcaa 22780218  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| |   ||||||||||||||||||||||| || |||||||||||||||||||||||| ||||| |||||| || ||||||||||    
22780217 ttatacttcaagtaatgcacgcaacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattatgattaacatcatcattaagtc 22780118  T
201 tt 202  Q
    ||    
22780117 tt 22780116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 29060571 - 29060771
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||||| ||||| ||| |||||||| || ||| ||     
29060571 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacat 29060670  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || |||||||||||| | | ||||||||||| || |||||||| || |||||||||||||||||||||||| |||||||||||  || ||||||||||    
29060671 tcataattcaagtaatgcacataacattatatctcatcataatcaacatcaacacatcttaaacagcttcacagattataattaatatcatcattaagtc 29060770  T
201 t 201  Q
    |    
29060771 t 29060771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 16496275 - 16496410
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||    
16496275 catgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaa 16496374  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    ||| |  |||||||||| |||||| |||||||||||    
16496375 ataattctcaagtaatgcataaaatattatatcaca 16496410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 18409917 - 18409717
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||| ||||||||||||| ||||||| ||| ||||||| |||||| |||||| |||||||||||| ||||| ||| |||||||| ||  || ||     
18409917 catgcagctcagttaaataacaacagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaatcatccat 18409818  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || |||||| ||||  ||| |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| || ||||||||||    
18409817 tcataattcaaataatacatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcatcattaagtc 18409718  T
201 t 201  Q
    |    
18409717 t 18409717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 25629445 - 25629245
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||||| |||| || |||| | | ||||||| ||||||||||||| ||| |||||||| ||||| ||| |||||||| || ||| ||     
25629445 catgcagcttagttaaattacaacaggaacacatgcagtatacgaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaattatacat 25629346  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||  || |||||||||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||  | ||||||||||    
25629345 tcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacaacatcattaagtc 25629246  T
201 t 201  Q
    |    
25629245 t 25629245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 19303630 - 19303435
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||| ||| ||||||||||| || |||||| |||||||||||| ||||| ||| |||||||| || ||| ||     
19303630 catgcagcttagttaaataacaacaacaacacaggaagtatacaaaa-caacatgacataataatatcaaatgcaagtcaacaacatctcaattatacat 19303532  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaa 197  Q
      ||  ||||||||||| | | |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||||||||||| || |||||||    
19303531 tcatatttcaagtaatgtacataacattatatcacatcataatcaacatcaacacatcttcaacagcttcacagattataattaacatcatcattaa 19303435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 20593804 - 20594004
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||| |||||||||| || ||||||| | | ||||||| ||||||||||||| |||||||||||| ||||| ||| |||||||| || ||| |||    
20593804 catgcagctcagttaaataaaaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacaa 20593903  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || | ||||||||||  || |||| ||||||||| |||||||| || |||||||||||||||||||||||| |||||||||| | |  ||||||||||    
20593904 tcataaatcaagtaatgcgtataacaatatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattatcattatcattaagtc 20594003  T
201 t 201  Q
    |    
20594004 t 20594004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 1595577 - 1595717
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| |||||||||   |||||||||||||| |||||| |||||||||||| ||||||||| |||| ||| || ||||||     
1595577 catgcagcttagttaaataacaacagcaacataac-agtatacaaaaacaacatgacataataatatcaaatgcaattcaacaacgtctcaattattcac 1595675  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
1595676 atataattcaagtaatggatatacaattatatcacaatataa 1595717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 20076731 - 20076862
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| |||| || ||||||||||||| |||||||||||| |||||   |||||||||||||| ||||||    
20076731 catgcagcttagttaaataacaacagcaacataggcagtaaac-aaaacagcatgacataataatatcaaatgcaa---atcaacatcttaaaaattcaa 20076826  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
     |||  |||||||||||  || ||||||||||||||    
20076827 ttatacttcaagtaatgcgtataacattatatcaca 20076862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 25754837 - 25754977
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
25754837 catgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 25754935  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
25754936 atataattcaagtaatgcatatataattatatcacaatataa 25754977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16920720 - 16920519
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||   || |||||| |||  ||||||| | | ||||||||||||||||  ||| ||    
16920720 catgcagcttagttaaataacaaacagcagcataggcagtatacaa---catcatgacataagtatatcaaattccattcatcaacatcttatgtataca 16920624  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    |||||| ||||||||||| ||||| ||||||| |||| |||||||| |||||||  ||||||  |||||||| | |||||| |||||||| |  ||||||    
16920623 aatattcttcaagtaatgcataaa-cattataccacatcataatcaacaacaacttatcttattcagcttcatagattatagttaacctcattcttaagt 16920525  T
200 cttaat 205  Q
    ||||||    
16920524 cttaat 16920519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8055057 - 8055197
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
8055057 catgcagcttagttaaataacaacagcaacacaaa-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 8055155  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
8055156 atataattcaagtaatgcatatacaattatatcacaatataa 8055197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 12742345 - 12742485
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
12742345 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 12742443  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
12742444 atataattcaagtaatgcatatacaattatatcacaatataa 12742485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 18456747 - 18456887
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
18456747 catgcagcttagttaaataacaacagcaacacaat-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18456845  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
18456846 atataattcaagtaatgcatatacaattatatcacaatataa 18456887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 19005074 - 19005214
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
19005074 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 19005172  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
19005173 atataattcaagtaatgcatatacaattatatcacaatataa 19005214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19859053 - 19858913
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
19859053 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 19858955  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
19858954 atataattcaagtaatgcatatacaattatatcacaatataa 19858913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22782255 - 22782395
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
22782255 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 22782353  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    | || |||||||||||| ||| |  |||||||||||| ||||    
22782354 acataattcaagtaatgcatatacaattatatcacaatataa 22782395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 24422575 - 24422715
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
24422575 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 24422673  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
24422674 atataattcaagtaatgcatatacaattatatcacaatataa 24422715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 30676844 - 30676704
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||  |||||||||||| ||||| ||| |||| ||| || ||||||     
30676844 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacgtctcaattattcac 30676746  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
30676745 atataattcaagtaatgcatatataattatatcacaatataa 30676704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 33861822 - 33861962
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
33861822 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 33861920  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
33861921 atataattcaagtaatgcatatacaattatatcacaatataa 33861962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 33864306 - 33864446
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
33864306 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 33864404  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
33864405 atataattcaagtaatgcatatacaattatatcacaatataa 33864446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 18334726 - 18334592
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
18334726 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18334628  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
18334627 atataattcaagtaatgcatatacaattatatcaca 18334592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25688530 - 25688644
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| |||||||||   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
25688530 catgcagcttagttaaataacaacagcaacataac-agtatacaaaaacagcatgacataataatatcaactgcaagtcaacaacgtctcaattattcac 25688628  T
101 atattattcaagtaat 116  Q
    |||| |||||||||||    
25688629 atataattcaagtaat 25688644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 26924774 - 26924640
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
26924774 catgcagcttagttaaataacaacagcaacacaat-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 26924676  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
26924675 atataattcaagtaatgcatatacaattatatcaca 26924640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 35245617 - 35245758
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||| ||||||  | ||||||||| ||||||||| ||||   |||| |||||||||||||| ||||||||||||||||||  ||| ||    
35245617 catgcagcttagttaattaacaaacaccaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtataca 35245713  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatca 145  Q
    |||||| ||||||||||| || || |||||||||||| ||||||||    
35245714 aatattcttcaagtaatgcat-aatcattatatcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34963401 - 34963541
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
34963401 catgcaacttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 34963499  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
34963500 atataattcaagtaatgcatatataattatatcacaatataa 34963541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18461907 - 18462022
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
18461907 catgcagcttagttaaataacaacagcaacacaat-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18462005  T
101 atattattcaagtaatg 117  Q
    |||| ||||||||||||    
18462006 atataattcaagtaatg 18462022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 2291314 - 2291180
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
2291314 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 2291216  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
2291215 atataattcaagtaatgcatatacaattatatcaca 2291180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 16448661 - 16448520
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| ||  ||||||||||||||||||||| |||||||||||| ||||| || |||||| ||| || ||||||    
16448661 catgcagcttagttaaataacaacagcgacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 16448563  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||||| ||| |  |||||||||||| ||||    
16448562 catataattcaattaatgcatatacaattatatcacaatataa 16448520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 22831534 - 22831721
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaa--tatt 97  Q
    |||||||||||||||||||||||  ||||||||||| | | | |||  |||   |||| |||| ||||||| | |||||||||||||||||| |  |||     
22831534 catgcagcttagttaaataacaaacagcaacataggcactgttcaacgaca---tgacataatcatatcaaattcaattcatcaacatcttagatgtata 22831630  T
98 caaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctc 189  Q
    |||| ||| ||||||||||| || |||||||||| |||| |||||||| |||||||| ||||||  |||||||||| |||||| ||||||||    
22831631 caaacattcttcaagtaatgcat-aaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctc 22831721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1541045 - 1540905
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||| ||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
1541045 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagtatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 1540947  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||| ||||||| ||||    
1540946 atataattcaagtaatgcatatacaattacatcacaatataa 1540905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25644351 - 25644468
Alignment:
1 catgcagcttagttaaataaca-atagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||| | ||||||||||| ||||| |||||||||| |||  ||| |||||||| || || |||||||||||| ||| |||||    
25644351 catgcagcttagttaaataacagacagcaacataggcagtatgcaaaaacagcgtgatataacaatatcaaatgtaagtcatcaacatctcaaacattca 25644450  T
100 aatattattcaagtaatg 117  Q
     |||| ||||||||||||    
25644451 tatataattcaagtaatg 25644468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 25656657 - 25656797
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||||| ||||| | |  ||| ||| || ||||||     
25656657 catgcagcttagttaaataacaacagcaacatagc-agtatacaaaaacagcatgacataataatatcaaatgcaagttaataacgtctcaattattcac 25656755  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||| ||||  ||| |  |||||||||||| ||||    
25656756 atataattcaactaatacatatataattatatcacaatataa 25656797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19848085 - 19847943
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaata-ttca 99  Q
    |||||| ||||||||||||||||||||| |||||| ||  ||||  |||||||  || ||| |||||||||||||||||| ||| |||||||||| ||||    
19848085 catgcaacttagttaaataacaatagcagcataggcagattacatcaacagcaacacataaaaatatcaattgcaattcaacaatatcttaaatatttca 19847986  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||||| ||| |  |||||||||||| ||||    
19847985 catataattcaaataatgcatatacaattatatcacaatataa 19847943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 3852151 - 3852011
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||| |||||||| ||||||| |   ||||||||||||||||||||| | ||||||| || ||||| ||| |||| ||| || ||||||     
3852151 catgcagcttagtttaataacaacagcaacacaat-agtatacaaaaacagcatgacatgataatataaaatgcaagtcaacaacgtctcaattattcac 3852053  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
3852052 atataattcaagtaatgcatatacaattatatcacaatataa 3852011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 27416011 - 27415887
Alignment:
19 aacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatga 118  Q
    ||||| ||||||||||| || |||||||  ||||||||| ||||| |||||||| ||||||| ||||||||| | |||||||||| |  | | ||||||     
27416011 aacaacagcaacataggcagcatacaaa--cagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattcttaggtaatgc 27415914  T
119 ataaaacattatatcacaacataatca 145  Q
    ||||||||||||||||||  |||||||    
27415913 ataaaacattatatcacattataatca 27415887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20557026 - 20556888
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||| | |||||||||||| ||||| ||| |||| ||| ||   ||||     
20557026 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatggcataataatatcaaatgcaagtcaacaacgtctcaa--tttcac 20556930  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
20556929 atataattcaagtaatgcatatacaattatatcacaatataa 20556888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 25603467 - 25603272
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattat 107  Q
    ||||||||| |||||| |||| |||||| ||  ||||| |||| |||||| ||| ||||||| ||  |||||| | |||||| || |||||||  |   |    
25603467 cttagttaattaacaacagcagcataggcagattacaacaacatcatgacataacaatatcatttataattca-ctacatctcaattattcaataaaact 25603369  T
108 tcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaa 204  Q
    |||||||||| ||| ||||| |||||||| ||||||||   || | |||||||||||||||||||| ||| || | ||| || ||||||||||||||    
25603368 tcaagtaatgtatacaacatcatatcacatcataatcaatgactaaacatcttaaacagcttcacagattctattaaacatcgtcattaagtcttaa 25603272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15041640 - 15041541
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| ||||||||||||||||||| | |||||| ||   |||| ||||||||||| | |||||||||| |||||||||  |||||||||| |||||||    
15041640 catgcaacttagttaaataacaatagtagcataggcagatcacaacaacagcatgacattataatatcaaatgcaattcaataacatcttaagtattcaa 15041541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20109169 - 20109285
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||  |||||  ||||||||||| ||||| ||||| || ||| |  ||| |||||||| ||||| |||||||||||| |||||||||    
20109169 catgcagcttagttaataaacaaacagcaacataggcagtatgcaaaa-caacataatataacaatatcaaatgcaagtcatcaacatctcaaatattca 20109267  T
100 aatattattcaagtaatg 117  Q
     |||| ||||||||||||    
20109268 tatataattcaagtaatg 20109285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 23992458 - 23992554
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| ||||| ||||||||||||||| |||||| ||  ||||  ||||||| ||| ||| |||||||||||||||   ||||||||||||||||||||    
23992458 catgcaacttagctaaataacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaat---tcaacatcttaaatattcaa 23992554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 11185536 - 11185737
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  | ||||||  | ||| ||||| ||||   |||| |||| ||||||| | |||||||||| ||||||   ||| ||    
11185536 catgcagcttagttaaataacaaacaacaacatgtgcagtgtacaacaaca---tgacataattatatcaaattcaattcatcagcatcttttgtataca 11185632  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    || ||| ||||||||||| || |||| ||||| |||  ||||||||||||||||| ||||||  || ||||||| ||||   ||||||||   |||||||    
11185633 aacattcttcaagtaatgcat-aaactttataacacttcataatcagcaacaacatatcttattcatcttcacagattacggttaacctcactattaagt 11185731  T
200 cttaat 205  Q
    ||||||    
11185732 cttaat 11185737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 25611805 - 25611643
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattat 107  Q
    ||||||||| |||||| |||| |||||| ||  ||||| |||| |||||| ||| ||||||| ||  |||||| | |||||| || |||||||  |   |    
25611805 cttagttaattaacaacagcagcataggcagattacaacaacatcatgacataacaatatcatttataattca-ctacatctcaattattcaataaaact 25611707  T
108 tcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttca 171  Q
    |||||||||| ||| ||||| |||||||| ||||||||   || | ||||||||||||||||||    
25611706 tcaagtaatgtatacaacatcatatcacatcataatcaatgactaaacatcttaaacagcttca 25611643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18821934 - 18821866
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaa 70  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||| | ||| ||||||||    
18821934 catgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgccataacaatatcaa 18821866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 21766722 - 21766756
Alignment:
1 catgcagcttagttaaataacaatagcaacatagg 35  Q
    |||||| ||||||||||||||||||||||||||||    
21766722 catgcaacttagttaaataacaatagcaacatagg 21766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28496561 - 28496515
Alignment:
1 catgcagcttagttaaataacaa-tagcaacatagggagtatacaaa 46  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||||    
28496561 catgcagcttagttaaataacaattagcaacataggcagtatgcaaa 28496515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29808972 - 29808926
Alignment:
1 catgcagcttagttaaataacaa-tagcaacatagggagtatacaaa 46  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||||    
29808972 catgcagcttagttaaataacaattagcaacataggcagtatgcaaa 29808926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18907138 - 18907226
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatctt 90  Q
    |||||||||||||||||||||||||||| ||||   ||   |||| |||||||| || | |||||||||||| || |||| |||||||||    
18907138 catgcagcttagttaaataacaatagcagcataatcagatcacaacaacagcataacttcataatatcaatt-catttcaacaacatctt 18907226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 5834436 - 5834404
Alignment:
152 acacatcttaaacagcttcacatattataatta 184  Q
    |||||||||||||||||| ||||||||||||||    
5834436 acacatcttaaacagctttacatattataatta 5834404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 20177096 - 20177128
Alignment:
152 acacatcttaaacagcttcacatattataatta 184  Q
    |||||||||||||||||| ||||||||||||||    
20177096 acacatcttaaacagctttacatattataatta 20177128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 22158895 - 22158863
Alignment:
152 acacatcttaaacagcttcacatattataatta 184  Q
    |||||||||||||||||| ||||||||||||||    
22158895 acacatcttaaacagctttacatattataatta 22158863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 13242 - 13448
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
13242 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 13341  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| ||| |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
13342 atattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaattataattaacatcatcattaagtc 13441  T
201 ttaatgc 207  Q
    |||||||    
13442 ttaatgc 13448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 22075054 - 22075256
Alignment:
5 cagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatat 104  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||||     
22075054 cagcttagttaaataacaacagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataa 22075153  T
105 tattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaa 204  Q
    |  |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
22075154 ttctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaa 22075253  T
205 tgc 207  Q
    |||    
22075254 tgc 22075256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 8286933 - 8286728
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaa-cagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||    
8286933 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaataatca 8286834  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    || ||| ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||    
8286833 aacattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacataatataattaacatcttcattaagt 8286734  T
200 cttaat 205  Q
    ||||||    
8286733 cttaat 8286728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 23390586 - 23390382
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
23390586 catgcagcttagttaaataacaacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 23390487  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||| ||||||||| |||||||||||| || ||||||||||    
23390486 atattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaacatcctcattaagtc 23390387  T
201 ttaat 205  Q
    |||||    
23390386 ttaat 23390382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 25421563 - 25421769
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||| |||||||||||||||||| ||| || ||||||||||||||||    
25421563 catgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacagcatcttaaatattcaa 25421662  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | |||||||||||||| |||||||| || |||| ||||||||||||||||||| |||||||||||| || ||||||||||    
25421663 ttatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtc 25421762  T
201 ttaatgc 207  Q
    | |||||    
25421763 tcaatgc 25421769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 25431425 - 25431631
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||| |||||    
25431425 catgcatcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatgttcaa 25431524  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | |||||||||||||| |||||||| || |||| ||||||||||||||||||| |||||||||||| || ||||||||||    
25431525 ttatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtc 25431624  T
201 ttaatgc 207  Q
    | |||||    
25431625 tcaatgc 25431631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 9077983 - 9078183
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||||| ||||| ||| |||||||| || ||| ||     
9077983 catgcagcttagttaaataacaacagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaacaacatctcaattatacat 9078082  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || | ||||||||||  || |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
9078083 tcataactcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtc 9078182  T
201 t 201  Q
    |    
9078183 t 9078183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 13025342 - 13025545
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| || | ||||||| ||||| ||| |||||||||||||||||||    
13025342 catgcagcatagttaaataacaatagcaacataggcagtatacaaaa-cagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaa 13025440  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||| ||||| | | |||||||||||||| | |||||| || ||||| |||||||||| |||||||||||||||||||| || ||||||||||    
13025441 ttatacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtc 13025540  T
201 ttaat 205  Q
    |||||    
13025541 ttaat 13025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 13095526 - 13095729
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| || | ||||||| ||||| ||| |||||||||||||||||||    
13095526 catgcagcatagttaaataacaatagcaacataggcagtatacaaaa-cagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaa 13095624  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||| ||||| | | |||||||||||||| | |||||| || ||||| |||||||||| |||||||||||||||||||| || ||||||||||    
13095625 ttatacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtc 13095724  T
201 ttaat 205  Q
    |||||    
13095725 ttaat 13095729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 24493600 - 24493803
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||| ||| |||||||||||||||||||    
24493600 catgcagcttggttaagtaacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaa 24493698  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||| ||| | | |||||||||||||| |||||||| || ||||| |||||||| ||||||||| |||||||||||| || | ||||||||    
24493699 ttatacttcaagtgatgcacataacattatatcacatcataatcaacatcaacatatcttaaatagcttcacagattataattaacatcattattaagtc 24493798  T
201 ttaat 205  Q
    |||||    
24493799 ttaat 24493803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21808479 - 21808344
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||    
21808479 catgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaa 21808380  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    ||| |  |||||||||| ||||||||||||||||||    
21808379 ataattctcaagtaatgcataaaacattatatcaca 21808344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21729154 - 21729019
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||    
21729154 catgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaa 21729055  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    ||| |  |||||||||| |||||| |||||||||||    
21729054 ataattctcaagtaatgcataaaatattatatcaca 21729019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21293059 - 21292856
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaat--tgcaattcatcaacatcttaaatattc 98  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||  ||| ||||| |||||||||||||  |  |||||||||||||||||  ||| |    
21293059 catgcagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatattcaaattcatcaacatcttaggtatac 21292962  T
99 aaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaag 198  Q
    || |||| ||||||||||| ||||| |||||||||||| |||||||| |||||||| |||||| ||| ||||||| ||||||||||||||| | ||||||    
21292961 aattattcttcaagtaatgcataaa-cattatatcacatcataatcatcaacaacatatcttatacaacttcacagattataattaacctcattattaag 21292863  T
199 tcttaat 205  Q
    |||||||    
21292862 tcttaat 21292856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 1096498 - 1096698
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||| ||||| |||||||| ||| || |||||||||||| ||||| ||| |||||||| | |||| ||     
1096498 catgcagcttagttaaataacaacagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatcaacaacatctcacatatacat 1096597  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || |||||||||||| ||| |||||||||||||| |||||||| || |||| ||||||||||||||||| |  ||||||||||| || ||||||||||    
1096598 tcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcctcattaagtc 1096697  T
201 t 201  Q
    |    
1096698 t 1096698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 24529251 - 24529449
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||| |||| ||||||| ||||| ||| ||||||||||| ||| ||     
24529251 catgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaacaacatcttaattatacat 24529350  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
      ||   ||||||||||  || |||||||||||||| |||| ||| || |||||||||||||||||||||||| |||||| ||||| || |||||||||    
24529351 tcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcatcattaagt 24529449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 22107371 - 22107259
Alignment:
93 atattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttc 192  Q
    |||||||| ||  |||||||||||| |||| | ||||||||||| |||||||| |||||||||| |||||||||||||||| ||||||||||||||||||    
22107371 atattcaagtaccattcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctcttc 22107272  T
193 attaagtcttaat 205  Q
    |||||||||||||    
22107271 attaagtcttaat 22107259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 264902 - 264762
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
264902 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 264804  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
264803 atataattcaagtaatgcatatacaattatatcacaatataa 264762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 18356364 - 18356488
Alignment:
19 aacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatga 118  Q
    ||||| ||||||||||| || |||||||  ||||||||  |||||||||||||| ||||||| ||||||||| ||||||||||||||  | ||||||||     
18356364 aacaacagcaacataggcagcatacaaa--cagcatgatataataatatcaatttcaattcaacaacatcttgaatattcaaatatttcttaagtaatgc 18356461  T
119 ataaaacattatatcacaacataatca 145  Q
    ||||||||||||||||||  |||||||    
18356462 ataaaacattatatcacattataatca 18356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 20909040 - 20909174
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
20909040 catgcagcttagttaaataacaaaagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 20909138  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
20909139 atataattcaagtaatgcatatacaattatatcaca 20909174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 39363412 - 39363546
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
39363412 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 39363510  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
39363511 atataattcaagtaatgcatatacaattatatcaca 39363546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 10733074 - 10732941
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
10733074 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 10732976  T
101 atattattcaagtaatgaataaaacattatatcac 135  Q
    |||| |||||||||||| ||| |  ||||||||||    
10732975 atataattcaagtaatgcatatacaattatatcac 10732941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 22412215 - 22412388
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||| |||||||||||||||| ||| ||||||||| ||||||||||| ||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
22412215 catgtagcttagttaaataacgataacaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 22412313  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaa 185  Q
      || ||||||||||| |           ||| ||| |||||||| || |||||||||||||||||||||||| |||||||||||    
22412314 tcataattcaagtaataa----------gtatgacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 22412388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 29329962 - 29330102
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
29329962 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 29330060  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
29330061 atataattcaagtaatgcatatacaattatatcacaatataa 29330102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21997624 - 21997549
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa 76  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||||| |||||    
21997624 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaa 21997549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 36154914 - 36154777
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||||||||||   ||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
36154914 catgcagcttagttaaataacaa---caacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 36154819  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
36154818 atataattcaagtaatgcatatacaattatatcacaatataa 36154777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 42245499 - 42245365
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
42245499 catgcaacttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 42245401  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
42245400 atataattcaagtaatgcatatacaattatatcaca 42245365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 2154748 - 2154607
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaata-ttca 99  Q
    ||||||||||||||||||||||||||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || || ||||    
2154748 catgcagcttagttaaataacaatagcaacacaac-agtatacaaaaacagcatgacataataatatcaactgcaagtcaacaacgtctcaattatttca 2154650  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||||| ||| |  |||||||||||| ||||    
2154649 catataattcaaataatgcatatacaattatatcacaatataa 2154607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 18319168 - 18319027
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| ||  ||||||||||||||||||||| |||||||||||| ||||| || |||||| ||| || ||||||    
18319168 catgcagcttagttaaataacaacagcgacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 18319070  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||||| ||| |  |||||||||||| ||||    
18319069 catataattcaattaatgcatatacaattatatcacaatataa 18319027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20902143 - 20902002
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaata-ttca 99  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || || ||||    
20902143 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacagcatgacataataatatcaagtgcaagtcaacaacgtctcaattatttca 20902045  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||||| ||| |  |||||||||||| ||||    
20902044 catataattcaaataatgcatatacaattatatcacaatataa 20902002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 18418613 - 18418793
Alignment:
3 tgcagcttagttaaa-taacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaa 101  Q
    |||| |||||||||| |||||| | ||||||||| ||||||||||  ||||||||| ||||||||||| |||||||||| ||||||||| |||||||||     
18418613 tgcaacttagttaaaataacaacatcaacataggcagtatacaaa--cagcatgacataataatatcatttgcaattca-caacatctt-aatattcaat 18418708  T
102 tattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctt-aaacagcttcacatattataattaa 185  Q
     |   ||||||||||| | | |||||||||||||| ||||||||    ||| ||||||| |||||||||||||  ||||||||||    
18418709 aaaacttcaagtaatgtacacaacattatatcacatcataatcaatgtcaaaacatcttaaaacagcttcacaggttataattaa 18418793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 29346012 - 29346148
Alignment:
5 cagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatat 104  Q
    ||||||||||||||||||| |||| || |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || |||||| ||||    
29346012 cagcttagttaaataacaacagcatcacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatat 29346110  T
105 tattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||||||||||| ||| |  |||||||||||| ||||    
29346111 aattcaagtaatgcatatacaattatatcacaatataa 29346148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 46 - 145
Target Start/End: Complemental strand, 20910844 - 20910745
Alignment:
46 aaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataatca 145  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||| || ||||||||| |  | |||||||| ||||||||||||||||||  |||||||    
20910844 aaacagcatgacataataatatcaatttcaattcaacaacatcttgaacattcaaataattcttaagtaatgcataaaacattatatcacattataatca 20910745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 11581333 - 11581193
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||||||| |||||| |||||||||||| ||||| |||  ||| ||| || ||||||     
11581333 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaataacgtctcaattattcac 11581235  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     ||| |||||||||||| ||| |  |||||||||||| ||||    
11581234 gtataattcaagtaatgtatatacaattatatcacaatataa 11581193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 29348516 - 29348621
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || |||||| |||| |||||||||||| ||| |  |||||||||||    
29348516 agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcaca 29348615  T
137 acataa 142  Q
    | ||||    
29348616 atataa 29348621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 29350989 - 29351094
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || |||||| |||| |||||||||||| ||| |  |||||||||||    
29350989 agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcaca 29351088  T
137 acataa 142  Q
    | ||||    
29351089 atataa 29351094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 39245164 - 39245304
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| |||  ||| ||  || ||||||     
39245164 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaataacgtcccaattattcac 39245262  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||| ||||||| ||||    
39245263 atataattcaagtaatgcatatacaattacatcacaatataa 39245304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 22144080 - 22144215
Alignment:
1 catgcagcttagttaaataaca-atagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||| | | ||||||||| ||||| ||||| || |||||  ||| |||||||||||||| ||| |||||||| ||| |||||    
22144080 catgcagcttagttaaataacagacatcaacataggtagtatgcaaaa-caacatgatataacaatatcaattgcaaatcaacaacatctcaaacattca 22144178  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
22144179 tatataattcaagtaatgcatatacaattatatcaca 22144215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17517291 - 17517192
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| ||||||| ||||||||||||| |||||| ||  ||||  ||||||| ||| ||| ||||||||| |||||||| |||||||||||||||||||    
17517291 catgcaacttagtttaataacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaatcgcaattcaacaacatcttaaatattcaa 17517192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 32027428 - 32027561
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattat 107  Q
    |||||||||||||||| | ||||| |   ||||||||||||||||||||| |||||||||||| | ||| ||| |||| ||| || |||||| |||| ||    
32027428 cttagttaaataacaacaacaacacaac-agtatacaaaaacagcatgacataataatatcaaatccaagtcaacaacgtctcaattattcacatataat 32027526  T
108 tcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||||||||| ||| |  |||||||||||| ||||    
32027527 tcaagtaatgcatatacaattatatcacaatataa 32027561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 37723934 - 37724073
Alignment:
1 catgcagcttagttaaataaca-atagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||| | ||||||||||| |||||||   ||||||||||| | || ||||||| |  ||||||||||||||| ||  |||||    
37723934 catgcagcttagttaaataacagacagcaacataggcagtatac---aacagcatgacatgattatatcaaattaaattcatcaacatctcaatcattca 37724030  T
100 aatattattcaagtaatg-aataaaacattatatcacaacata 141  Q
       || |||||||||||| ||| ||||||||||||||| ||||    
37724031 ttcataattcaagtaatgcaattaaacattatatcacatcata 37724073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 31061096 - 31061237
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    |||||| |||||||||||||||| ||||| | ||  ||||||||||||||||||||| |||||||||||| ||||| || |||||| | | || ||||||    
31061096 catgcaacttagttaaataacaacagcaaaacagt-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtatcaattattca 31061194  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     | || ||| || ||||| ||| || |||||||||||| ||||    
31061195 caaataatttaattaatgcatataaaattatatcacaatataa 31061237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 10775810 - 10775674
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||| | ||| ||| ||  |||||| |||| ||||||||| |||||||||||| ||||| || |||||| ||| || ||||||    
10775810 catgcagcttagttaaataacgacagcgacacagc-agtatataaaaccagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 10775712  T
100 aatattattcaagtaatgaataaaacattatatcacaa 137  Q
     |||| |||||| ||||| ||| |  ||||||||||||    
10775711 catataattcaattaatgcatatacaattatatcacaa 10775674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23064539 - 23064613
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa 76  Q
    ||||||||||||||||||||||| | | ||| ||  ||||||||||||||||||||| |||||||||||| |||||    
23064539 catgcagcttagttaaataacaacaacgacacagt-agtatacaaaaacagcatgacctaataatatcaaatgcaa 23064613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38619462 - 38619536
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa 76  Q
    ||||||||||||||||||||||| | | ||| ||  ||||||||||||||||||||| |||||||||||| |||||    
38619462 catgcagcttagttaaataacaacaacgacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaa 38619536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 21986130 - 21986037
Alignment:
108 tcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtct 201  Q
    |||||||||| ||| |||||| ||||||  |||| ||| || |||||||||||||||| ||||||| |||||| ||||| || |||| ||||||    
21986130 tcaagtaatgcatataacattttatcacctcatattcaacatcaacacatcttaaacaacttcacaaattatagttaacatcatcatcaagtct 21986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 24067136 - 24067276
Alignment:
2 atgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattcaa 100  Q
    ||||||||| |||||||||||| ||| ||| |   |||||||||||||| |||||| |||||||||||| ||||| || |||| | ||| || ||||||     
24067136 atgcagcttggttaaataacaacagcgacacaac-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcatcgtctcaattattcac 24067234  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||| ||||| ||| |  |||||||||||| ||||    
24067235 atataattcaattaatgcatatacaattatatcacaatataa 24067276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20027031 - 20026942
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacag--catgacgtaataatatcaattgcaattcatcaacatc 88  Q
    ||||||||||||||||||||| || ||||||||||| ||||| | |||||||  |||||  |||||||||||| ||||||||| |||||||    
20027031 catgcagcttagttaaataacaaacagcaacataggcagtat-ccaaaacagttcatgatataataatatcaaatgcaattcaacaacatc 20026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20918082 - 20918017
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatat 67  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||||||||||||||  ||||||||    
20918082 catgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacaaaataatat 20918017  T

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Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21873281 - 21873351
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaat 71  Q
    |||||| |||||||||||||||| |||| |||||| || |||||| | ||||||||| | |||||||||||    
21873281 catgcaacttagttaaataacaaaagcagcataggcaggatacaacatcagcatgacttcataatatcaat 21873351  T

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Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21565573 - 21565688
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||||||| |||||||||||||| ||||| | ||| || |||||  ||| |||||| | ||||| |||||||||| | ||||| |||    
21565573 catgcagcttagttaaataacaaatagcaacataggcagtat-ccaaatcatcatgatataacaatatcgaatgcaagtcatcaacatttcaaata-tca 21565670  T
100 aatattattcaagtaatg 117  Q
    || || ||||| ||||||    
21565671 aacataattcatgtaatg 21565688  T

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Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 20766166 - 20766095
Alignment:
45 aaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaat 116  Q
    ||||||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||   || |||||||||||    
20766166 aaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaat 20766095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26704102 - 26704158
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgac 57  Q
    |||||||||| ||||||||||||||||| |||||| ||  ||||| ||||| |||||    
26704102 catgcagcttggttaaataacaatagcagcataggcagattacaacaacagtatgac 26704158  T

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Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26973835 - 26973891
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgac 57  Q
    |||||||||| ||||||||||||||||| |||||| ||  ||||| ||||| |||||    
26973835 catgcagcttggttaaataacaatagcagcataggcagattacaacaacagtatgac 26973891  T

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Target: scaffold1842 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 1138 - 933
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
1138 catgcagcttagttaaataacaacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 1039  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| | | ||||||||||||||||||||| | ||||||||||||||||||||||||||    
1038 atattattcaagtaatgcat-aaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctcttcattaagtc 940  T
201 ttaatgc 207  Q
    |||||||    
939 ttaatgc 933  T

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Target: scaffold0011 (Bit Score: 151; Significance: 4e-80; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 168068 - 167863
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
168068 catgcagcttagttaaataacaacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 167969  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| | | ||||||||||||||||||||| | ||||||||||||||||||||||||||    
167968 atattattcaagtaatgcat-aaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctcttcattaagtc 167870  T
201 ttaatgc 207  Q
    |||||||    
167869 ttaatgc 167863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 51944 - 52148
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||    
51944 catgcagcttagttaaataacaacagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaa 52043  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | ||||||||||||||||||||||  || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
52044 ttatacttcaagtaatgcacataacattatatcacaacataatctacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtc 52143  T
201 ttaat 205  Q
    |||||    
52144 ttaat 52148  T

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Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 26212034 - 26212233
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattat 107  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |      
26212034 cttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataattc 26212133  T
108 tcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaatgc 207  Q
    |||||||||| ||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
26212134 tcaagtaatgcataaaacattatatcacattataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtcttaatgc 26212233  T

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Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 9509220 - 9509426
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| || |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
9509220 catgcagcttagttaaataacaacagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 9509319  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| | | |||| ||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
9509320 atattcttcaagtaatgcacataacactatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtc 9509419  T
201 ttaatgc 207  Q
    |||||||    
9509420 ttaatgc 9509426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 12698862 - 12699067
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaa-acagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
12698862 catgcagcttagttaaataacaacagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 12698961  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    |||||| ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||| |    
12698962 aatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaact 12699061  T
200 cttaat 205  Q
    ||||||    
12699062 cttaat 12699067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 10589070 - 10589273
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||| |||| ||||||||||||||||| ||||||||| ||| |||||    
10589070 catgcagcttagttaaataacaacagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaacatcttcaatgttcaa 10589169  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| |||||| |||| || ||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
10589170 atattcttcaagcaatgcat-aaacattatatcacatcataatcagcaacaacacatcttaaatagcttcacagattataattaacctcatcattaagtc 10589268  T
201 ttaat 205  Q
    |||||    
10589269 ttaat 10589273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 16386338 - 16386132
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  | | ||||||| ||||||||||| ||||||||| |||  |||||||||| | |||||||||||||||||||||||    
16386338 catgcagcttagttaaataacaaacaacgacataggcagtatacaaaatcagcatgacataaatatatcaattgtatttcatcaacatcttaaatattca 16386239  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    || | |  |||||||||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
16386238 aacaattctcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacagattatagttaacctcttcattaagt 16386139  T
200 cttaatg 206  Q
    |||||||    
16386138 cttaatg 16386132  T

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Target: chr7; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 18456502 - 18456319
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| || |||||| |||||||||||| ||||| ||| |||||||||||||||||||    
18456502 catgcagcttagttaaataacgatagcaacataggcagtatacaaaa-caacatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaa 18456404  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaa 185  Q
     |||  ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||    
18456403 ttatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 18456319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 38227512 - 38227715
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||| ||| |||||||||||||||||||    
38227512 catgcagcttagttaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaa 38227610  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||| ||||| | | | |||||||||||| | |||||| || ||||| |||||||| | |||||||||||||||||||| || ||||||||||    
38227611 ttatacttcaattaatgtacatatcattatatcacatcttaatcaacatcaacatatcttaaatatcttcacatattataattaacatcatcattaagtc 38227710  T
201 ttaat 205  Q
    |||||    
38227711 ttaat 38227715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 40443424 - 40443624
Alignment:
3 tgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaa 101  Q
    |||||||||||||||||||||  ||||||||| | |||| |||||  ||||||||| |||||||||||||| ||||||||||||||||||  ||| ||||    
40443424 tgcagcttagttaaataacaaacagcaacatacgcagtaaacaaa--cagcatgacataataatatcaatttcaattcatcaacatcttaggtatacaaa 40443521  T
102 tattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtct 201  Q
    |||| ||||||||||| || ||||||||||||||| |||||||| |||| ||| |||||| ||||||||||| ||||||||||||||| |  ||||||||    
40443522 tattcttcaagtaatgcat-aaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtct 40443620  T
202 taat 205  Q
    ||||    
40443621 taat 40443624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 3564454 - 3564254
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||||| || || ||| |||||||| || ||| ||     
3564454 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaacaacatctcaattatacat 3564355  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||  || ||||||| |||||| |||||||| || |||||||||||||||| ||||| |  ||||||||||| || ||||||||||    
3564354 tcataattcaagtaatgcgtataacattagatcacatcataatcaacatcaacacatcttaaacaacttcataggttataattaacatcatcattaagtc 3564255  T
201 t 201  Q
    |    
3564254 t 3564254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13647356 - 13647497
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
13647356 catgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 13647455  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
13647456 atataattcaagtaatgcatatacaattatatcacaatataa 13647497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 27847920 - 27847719
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||| ||  ||||||||||| ||| |||||   ||| ||||| |||| ||||||| | ||||||||||||||||||  ||| ||    
27847920 catgcagcttagttaaataataaacagcaacataggcagtgtacaa---cagtatgacataattatatcaaattcaattcatcaacatcttatgtataca 27847824  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    || ||| ||||||||||| ||||| ||||||  |||| |||||||| |||||||| ||||||  |||||||||| |||||| |||| ||| | |||||||    
27847823 aacattcttcaagtaatgcataaa-cattatcacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaatctcattattaagt 27847725  T
200 cttaat 205  Q
    ||||||    
27847724 cttaat 27847719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 16213712 - 16213852
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||||||| | ||| ||| |||| |||||| ||||||     
16213712 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacaacatgacataataatatcaaatccaagtcaacaacgtcttaattattcac 16213810  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||||||||    
16213811 atataattcaagtaatgcatatataattatatcacaacataa 16213852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 456349 - 456489
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
456349 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 456447  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
456448 atataattcaagtaatgcatatacaattatatcacaatataa 456489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 11393421 - 11393281
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
11393421 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 11393323  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
11393322 atataattcaagtaatgcatatacaattatatcacaatataa 11393281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 11972524 - 11972664
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
11972524 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 11972622  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
11972623 atataattcaagtaatgcatatacaattatatcacaatataa 11972664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15376847 - 15376707
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
15376847 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 15376749  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
15376748 atataattcaagtaatgcatatacaattatatcacaatataa 15376707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 16232548 - 16232688
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
16232548 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 16232646  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
16232647 atataattcaagtaatgcatatacaattatatcacaatataa 16232688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 18640300 - 18640440
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
18640300 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18640398  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
18640399 atataattcaagtaatgcatatacaattatatcacaatataa 18640440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20385257 - 20385117
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
20385257 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 20385159  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
20385158 atataattcaagtaatgcatatacaattatatcacaatataa 20385117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21189729 - 21189589
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
21189729 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 21189631  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
21189630 atataattcaagtaatgcatatacaattatatcacaatataa 21189589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 27216888 - 27217028
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
27216888 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 27216986  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
27216987 atataattcaagtaatgcatatacaattatatcacaatataa 27217028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 32125519 - 32125659
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
32125519 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 32125617  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
32125618 atataattcaagtaatgcatatacaattatatcacaatataa 32125659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 41522945 - 41523085
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
41522945 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 41523043  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
41523044 atataattcaagtaatgcatatacaattatatcacaatataa 41523085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 41525407 - 41525547
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
41525407 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 41525505  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
41525506 atataattcaagtaatgcatatacaattatatcacaatataa 41525547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24275199 - 24275314
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
24275199 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 24275297  T
101 atattattcaagtaatg 117  Q
    |||| ||||||||||||    
24275298 atataattcaagtaatg 24275314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 14949256 - 14949122
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
14949256 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 14949158  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
14949157 atataattcaagtaatgcatatacaattatatcaca 14949122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 48273421 - 48273508
Alignment:
2 atgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatct 89  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||| ||||| ||| ||||||||    
48273421 atgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 48273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 24702266 - 24702406
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
24702266 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 24702364  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
24702365 atataattcaagtaatgcatatacaattatatcacaatataa 24702406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16410087 - 16410201
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
16410087 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 16410185  T
101 atattattcaagtaat 116  Q
    |||| |||||||||||    
16410186 atataattcaagtaat 16410201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 18430740 - 18430874
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||| ||||||| |||||| |||||||||||| ||||| ||| |||||||| || ||||||     
18430740 catgcagcttagttaaataacaacagcaacacaac-agtatataaaaacatcatgacataataatatcaaatgcaagtcaacaacatctcaattattcac 18430838  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
18430839 atataattcaagtaatgcatatacaattatatcaca 18430874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 3386361 - 3386501
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| | |||||||||| ||||| ||| |||| ||| || ||||||     
3386361 catgcagcttagttaaataacaacagcaacacaat-agtatacaaaaacagcatgacatgataatatcaaatgcaagtcaacaacgtctcaattattcac 3386459  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||  ||| |  |||||||||||| ||||    
3386460 atataattcaagtaatacatatacaattatatcacaatataa 3386501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 44116537 - 44116677
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||| |||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
44116537 catgcagcttggttaaataacaacagcaacacagc-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 44116635  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| ||||||| |||| ||| |  |||||||||||| ||||    
44116636 atataattcaagcaatgcatatacaattatatcacaatataa 44116677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 2280209 - 2280036
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||  |||||  | ||||||||| ||||| ||||| ||||||||  |||||||||||| ||||| ||| |||||||| |||||||||    
2280209 catgcagcttagttaataaacaaacaacaacataggcagtatgcaaaa-cagcatgatataataatatcaaatgcaaatcaacaacatctcaaatattca 2280111  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctta-aacagcttcaca 173  Q
     |||| |||||| ||||  ||| || |||||||||||  |||| || || |||  ||||||| ||||||||||||    
2280110 tatataattcaaataatacatataaaattatatcacattataaacaacatcaaatcatcttataacagcttcaca 2280036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 13869374 - 13869474
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| ||  ||||||||||||||||||||| |||||||||||| ||||| || |||||| ||| || ||||||    
13869374 catgcagcttagttaaataacaacagcgacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 13869472  T
100 aa 101  Q
    ||    
13869473 aa 13869474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 14932817 - 14932688
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa-ttcatcaacatcttaaatattcaaatatta 106  Q
    ||||||||||||||||||| | |||||| ||  ||||| || |||||||| |||||||||||||||||| |||| |||||  ||||||||||||  |       
14932817 cttagttaaataacaatagtagcataggtagattacaacaatagcatgacataataatatcaattgcaatttcaacaacactttaaatattcaataaaac 14932718  T
107 ttcaagtaatgaataaaacattatatcaca 136  Q
    ||||||||||| | | ||||||||||||||    
14932717 ttcaagtaatgcacacaacattatatcaca 14932688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 15356252 - 15356123
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa-ttcatcaacatcttaaatattcaaatatta 106  Q
    ||||||||||||||||||| | |||||| ||  ||||| || |||||||| |||||||||||||||||| |||| |||||  ||||||||||||  |       
15356252 cttagttaaataacaatagtagcataggtagattacaacaatagcatgacataataatatcaattgcaatttcaacaacactttaaatattcaataaaac 15356153  T
107 ttcaagtaatgaataaaacattatatcaca 136  Q
    ||||||||||| | | ||||||||||||||    
15356152 ttcaagtaatgcacacaacattatatcaca 15356123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 15360366 - 15360237
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa-ttcatcaacatcttaaatattcaaatatta 106  Q
    ||||||||||||||||||| | |||||| ||  ||||| || |||||||| |||||||||||||||||| |||| |||||  ||||||||||||  |       
15360366 cttagttaaataacaatagtagcataggtagattacaacaatagcatgacataataatatcaattgcaatttcaacaacactttaaatattcaataaaac 15360267  T
107 ttcaagtaatgaataaaacattatatcaca 136  Q
    ||||||||||| | | ||||||||||||||    
15360266 ttcaagtaatgcacacaacattatatcaca 15360237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 142
Target Start/End: Complemental strand, 26356082 - 26355977
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    |||||||||||||||||| || |||||||||||| ||||| ||| |||| ||| || |||||| |||| |||||||||||| ||| |  |||||||||||    
26356082 agtatacaaaaacagcataacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcaca 26355983  T
137 acataa 142  Q
    | ||||    
26355982 atataa 26355977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 142
Target Start/End: Complemental strand, 26358534 - 26358429
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    |||||||||||||||||| || |||||||||||| ||||| ||| |||| ||| || |||||| |||| |||||||||||| ||| |  |||||||||||    
26358534 agtatacaaaaacagcataacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcaca 26358435  T
137 acataa 142  Q
    | ||||    
26358434 atataa 26358429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 38898511 - 38898376
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| | | ||| ||  |||||| |||||||||||||| |||||||||||| ||||| || |||||||||| || ||||||    
38898511 catgcagcttagttaaataacaacaacgacacagc-agtatataaaaacagcatgacataataatatcaaatgcaagtcaatcaacatctcaattattca 38898413  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     | || |||||| ||||| ||| |  |||||||||||    
38898412 caaataattcaattaatgcatatacaattatatcaca 38898376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 20110611 - 20110714
Alignment:
39 tatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaac 138  Q
    ||||||||||||||||||| |||||||||||| ||||| |||  ||| ||| || |||||| |||| |||||||||||| ||| |  ||||||||||||     
20110611 tatacaaaaacagcatgacataataatatcaaatgcaagtcaataacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacaat 20110710  T
139 ataa 142  Q
    ||||    
20110711 ataa 20110714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 24704716 - 24704853
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||    ||| |||||||||||| ||||| ||| |||| ||| || ||||||     
24704716 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacaa---gacataataatatcaaatgcaagtcaacaacgtctcaattattcac 24704811  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
24704812 atataattcaagtaatgcatatacaattatatcacaatataa 24704853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 17062049 - 17061909
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||| ||||||  ||  |||||||||||  |||||||| |||||||||||| ||||| ||| |||| ||| || |||| |    
17062049 catgcagcttagttaaataacaatcagcaactcagc-agtatacaaaat-agcatgacataataatatcaaatgcaagtcagcaacgtctcaattattaa 17061952  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||||||||| ||| |  |||||||||||| ||||    
17061951 catataattcaagtaatgcatatacaattatatcacaatataa 17061909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 12756802 - 12756665
Alignment:
4 gcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaata 103  Q
    |||| ||||||||||||||| ||||||| |   | |||||||||||| |||||| |||||||||||| ||||| | | |||| ||| || |||||| |||    
12756802 gcagtttagttaaataacaacagcaacacaacaa-tatacaaaaacaacatgacataataatatcaaatgcaagtaaacaacgtctcaattattcacata 12756704  T
104 ttattcaagtaatgaataaaacattatatcacaacataa 142  Q
      |||||||||||| ||| |  |||||||||||| ||||    
12756703 aaattcaagtaatgcatatacaattatatcacaatataa 12756665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 13831401 - 13831498
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| | |||||  || |||||||||||||| |||||| ||||||||| || ||||| ||| |||| ||| || ||||||    
13831401 catgcagcttagttaaataacaacaacaacac-ggtagtatacaaaaacaacatgacataataatataaaatgcaagtcaacaacgtctcaattattca 13831498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 2530183 - 2530126
Alignment:
46 aaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaata 103  Q
    ||||| |||||| |||||||||||||| ||||||| ||||||||| ||||||||||||    
2530183 aaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaata 2530126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18154931 - 18154875
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgac 57  Q
    |||||||||| |||||||||||||||||||||||| ||  ||||| ||||| |||||    
18154931 catgcagcttggttaaataacaatagcaacataggcagattacaacaacagtatgac 18154875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 811221 - 811175
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaa 46  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||    
811221 catgcagcttagttaaataacaaatagcaacataggcagtatgcaaa 811175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 15211488 - 15211632
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtat-acaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||| ||||||||| |||||| |||| |||||| || || |||| |||| |||||| ||| ||||||| ||  |||||| |||||||| || ||||||    
15211488 catgcaacttagttaattaacaacagcagcataggcagaatcacaacaacatcatgacataacaatatcatttataattca-caacatctcaattattca 15211586  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatca 145  Q
    |  |   ||||||  ||| ||| |||||||||||||| ||||||||    
15211587 ataaaacttcaagcgatgtatacaacattatatcacatcataatca 15211632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22072944 - 22073033
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatct 89  Q
    ||||||||||||||||||||| || | ||||||||| | ||| ||||| ||||||||  ||| |||||||| || || ||| ||||||||    
22072944 catgcagcttagttaaataacaaacaacaacataggcactatgcaaaaccagcatgatataacaatatcaaatgtaagtcaacaacatct 22073033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 3e-78; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 23285896 - 23286096
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||    
23285896 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacag----acataataatatcaattgcaattcatcaacatcttaaatattcaa 23285991  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    || || ||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
23285992 atgttcttcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcttcattaagtc 23286091  T
201 ttaat 205  Q
    |||||    
23286092 ttaat 23286096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 23654476 - 23654270
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | || |||||| || ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
23654476 catgcagcttagttaaataacaacaacagcataggcagcatacaaatacatcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 23654377  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     ||||| |||||||||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
23654376 gtattactcaagtaatgcataaaacattatatcacatcataattaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtc 23654277  T
201 ttaatgc 207  Q
    |||||||    
23654276 ttaatgc 23654270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22731324 - 22731120
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
22731324 catgcagcttagttaaataacaacagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatattaaatattcaa 22731225  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
22731224 atattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtc 22731125  T
201 ttaat 205  Q
    |||||    
22731124 ttaat 22731120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22738269 - 22738066
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| |  || ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
22738269 catgcagcttagttaaataacaacattaa-ataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 22738171  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
22738170 atattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtc 22738071  T
201 ttaat 205  Q
    |||||    
22738070 ttaat 22738066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 298905 - 298698
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||| |||  ||||||||||||||||| ||||||||||||||||||    
298905 catgcagcttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattca 298806  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    |||| |  |||||||||| |||||||||||||||||| |||||| |  |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
298805 aataattctcaagtaatgcataaaacattatatcacatcataattaataacaacacatcttatacagcttcacatattatagttaacctcttcattaagt 298706  T
200 cttaatgc 207  Q
    ||||||||    
298705 cttaatgc 298698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 23060544 - 23060742
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||||| ||| |||||||||||||||| ||    
23060544 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatattaaa 23060643  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
23060644 ttatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca-attataattaacatcatcattaagtc 23060742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 23076473 - 23076658
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||| |||||||||||||||    
23076473 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaatatcttaaatattcaa 23076572  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaac 186  Q
     |||  ||||||||||| | | |||||||||||||| |||||||| || ||||||| |||||||||||||||| ||||||||||||    
23076573 ttatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagattataattaac 23076658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 38204 - 38002
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||| | |||||||| |||||||  ||| |||    
38204 catgcagcttagttaaataacaacagcaacataggcagtatacaaaa-cagcatgacataataatatcaatttcgattcatcatcatcttatgtatacaa 38106  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    | ||| ||||||||||| ||||| |||||||||||| |||||||| ||||||||  ||||| ||||||||| | ||||||||||||||| |  |||||||    
38105 acattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacaacatgtcttatacagcttcagagattataattaacctcattgttaagtc 38007  T
201 ttaat 205  Q
    |||||    
38006 ttaat 38002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22337146 - 22337350
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |||  ||||| |||||||||||||| |||||||||||| |||||  || |||||||| |||||| ||     
22337146 catgcagcttagttaaataacaacagcaacacaggctgtatataaaaacagcatgacataataatatcaaatgcaagacaacaacatctcaaatatacat 22337245  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||  || |||||||||||||| |||||||| || ||||| |||||||||| ||||||| |||||||||||| || ||||||||||    
22337246 tcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaattataattaacatcatcattaagtc 22337345  T
201 ttaat 205  Q
    |||||    
22337346 ttaat 22337350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 20309139 - 20309340
Alignment:
1 catgcagcttagttaaataacaa-tagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||   ||||||||| |||| ||||||| | ||||||||||||||||||  ||| ||    
20309139 catgcagcttagttaaataacaaatagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgtataca 20309235  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    |||||| ||||||||||| || |||||||||| |||| |||||||| |||||||| ||||||  |||||||||| |||||| |||||||| |  ||||||    
20309236 aatattcttcaagtaatgcat-aaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattcttaagt 20309334  T
200 cttaat 205  Q
    ||||||    
20309335 cttaat 20309340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 201
Target Start/End: Original strand, 23660061 - 23660253
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattat 107  Q
    |||||||||| ||||| ||||||||||| ||||||| ||| ||| ||||| |||||||||||| ||||| ||| |||||||||||||||||||  || |     
23660061 cttagttaaacaacaacagcaacataggcagtatacgaaa-caggatgacataataatatcaaatgcaaatcaacaacatcttaaatattcaatcataac 23660159  T
108 tcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtct 201  Q
    ||||||||||  || |||||||||||||| |||||||| || |||||||||||||||||||| ||| |||||||||||| || ||| |||||||    
23660160 tcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacaaattataattaacatcatcaataagtct 23660253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22105440 - 22105581
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
22105440 catgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacttctcaattattcac 22105539  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
22105540 atataattcaagtaatgcatatacaattatatcacaatataa 22105581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21155194 - 21155054
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||||||||| ||| |||| ||| || ||||||     
21155194 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaattgcaagtcaacaacgtctcaattattcac 21155096  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
21155095 atataattcaagtaatgcatatacaattatatcacaatataa 21155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 18808971 - 18809111
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
18808971 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18809069  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
18809070 atataattcaagtaatgcatatacaattatatcacaatataa 18809111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 23709666 - 23709526
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
23709666 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23709568  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
23709567 atataattcaagtaatgcatatacaattatatcacaatataa 23709526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 23712147 - 23712007
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
23712147 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23712049  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
23712048 atataattcaagtaatgcatatacaattatatcacaatataa 23712007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 24367802 - 24367942
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
24367802 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 24367900  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
24367901 atataattcaagtaatgcatatacaattatatcacaatataa 24367942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 32215055 - 32214915
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
32215055 catgcagcttagttaaataacaacaacaacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 32214957  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
32214956 atataattcaagtaatgcatatataattatatcacaatataa 32214915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 39682341 - 39682481
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
39682341 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 39682439  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
39682440 atataattcaagtaatgcatatacaattatatcacaatataa 39682481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 23130890 - 23131024
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
23130890 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23130988  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
23130989 atataattcaagtaatgcatatacaattatatcaca 23131024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 23133357 - 23133491
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
23133357 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23133455  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
23133456 atataattcaagtaatgcatatacaattatatcaca 23133491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 23708706 - 23708536
Alignment:
4 gcagcttagttaaataaca-atagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaat 102  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||| || |||||  ||| |||||||||||||| ||||| |||||| ||| ||||||||    
23708706 gcagcttagttaaataacagatagcaacataggcagtatgcaaaa-caacatgatataacaatatcaattgcaaatcatcgacatctcaaacattcaaat 23708608  T
103 attattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctta-aacagcttcaca 173  Q
    || |||||||||||| ||| |  |||||||||||  |||| || || |||  ||||||| ||||||||||||    
23708607 ataattcaagtaatgcatatacaattatatcacattataaacaacatcaattcatcttataacagcttcaca 23708536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 26505407 - 26505541
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||| |||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
26505407 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 26505505  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
26505506 atataattcaagtaatgcatatacaattatatcaca 26505541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 26507885 - 26508019
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||| |||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
26507885 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 26507983  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
26507984 atataattcaagtaatgcatatacaattatatcaca 26508019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 34402656 - 34402522
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
34402656 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 34402558  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
34402557 atataattcaagtaatgcatatacaattatatcaca 34402522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 27753730 - 27753812
Alignment:
125 cattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaatgc 207  Q
    |||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||    
27753730 cattatatcacatcataatcaacatcaacacatcttaaacagtttcacatattataattaacatcatcattaagtcttaatgc 27753812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 571425 - 571565
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || | ||||     
571425 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattgttcac 571523  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
571524 atataattcaagtaatgcatatacaattatatcacaatataa 571565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 6726023 - 6726163
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| || || ||| |||| ||| || ||||||     
6726023 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgtaagtcaacaacgtctcaattattcac 6726121  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
6726122 atataattcaagtaatgcatatacaattatatcacaatataa 6726163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 32039632 - 32039492
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| || |||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
32039632 catgcagcttagttaaataacaacagtaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 32039534  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
32039533 atataattcaagtaatgcatatacaattatatcacaatataa 32039492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23135618 - 23135733
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
23135618 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23135716  T
101 atattattcaagtaatg 117  Q
    |||| ||||||||||||    
23135717 atataattcaagtaatg 23135733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 43137327 - 43137467
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  | |||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || | ||||     
43137327 catgcagcttagttaaataacaacagcaacacagtaa-tatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattgttcac 43137425  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
43137426 atataattcaagtaatgcatatacaattatatcacaatataa 43137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 24898330 - 24898195
Alignment:
1 catgcagctt-agttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||| ||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||    
24898330 catgcagctttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 24898232  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
24898231 catataattcaagtaatgcatatacaattatatcaca 24898195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 24900813 - 24900678
Alignment:
1 catgcagctt-agttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||| ||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||    
24900813 catgcagctttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 24900715  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
24900714 catataattcaagtaatgcatatacaattatatcaca 24900678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 24903290 - 24903155
Alignment:
1 catgcagctt-agttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||| ||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||    
24903290 catgcagctttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 24903192  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
24903191 catataattcaagtaatgcatatacaattatatcaca 24903155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 24905767 - 24905632
Alignment:
1 catgcagctt-agttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||| ||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||    
24905767 catgcagctttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 24905669  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
24905668 catataattcaagtaatgcatatacaattatatcaca 24905632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 24908242 - 24908107
Alignment:
1 catgcagctt-agttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||| ||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||    
24908242 catgcagctttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 24908144  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
24908143 catataattcaagtaatgcatatacaattatatcaca 24908107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 25616216 - 25616315
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| ||||||||||| ||||||||| |||||| ||  ||||  ||||||| ||| ||| |||||||||||||||||| |||||||||||||||||||    
25616216 catgcaacttagttaaattacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaa 25616315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 23103485 - 23103351
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||||||| || ||||||||||| |||||||  |||||||||||| | || ||||||| | |||||||||||||||| ||  |||||     
23103485 catgcagcttagttaaataaaaacagcaacataggcagtatac--aaacagcatgacatgattatatcaaattcaattcatcaacatctcaatcattcat 23103388  T
101 atattattcaagtaatg-aataaaacattatatcaca 136  Q
      || |||||||| ||| ||| |||||||||||||||    
23103387 tcataattcaagtcatgcaattaaacattatatcaca 23103351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 28577127 - 28577267
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||  |   ||||||||||||||||||||  |||||||||||| |||||  || |||| ||| || ||||||     
28577127 catgcagcttagttaaataacaacagcaacgcaac-agtatacaaaaacagcatgatataataatatcaaatgcaagccaacaacgtctcaattattcac 28577225  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
28577226 atataattcaagtaatgcatatacaattatatcacaatataa 28577267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 45029988 - 45029848
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||| |   | |||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
45029988 catgcagcttagttaaataacaacaacaacacaacaa-tatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 45029890  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |   ||||||||||| ||||    
45029889 atataattcaagtaatgcatatacatttatatcacaatataa 45029848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 7823 - 7688
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||  |||||  ||||||||||| ||||| ||||| || |||||  ||| |||||||| ||||| |||||||||||| ||| |||||    
7823 catgcagcttagttaataaacaaacagcaacataggcagtatgcaaaa-caacatgatataacaatatcaaatgcaagtcatcaacatctcaaacattca 7725  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
7724 tatataattcaagtaatgtatatacaattatatcaca 7688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22799216 - 22799125
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaa 92  Q
    |||||| ||||||||||||||||||||| |||||| ||   |||| |||| |||||| | |||||||||||| || |||| |||||||||||    
22799216 catgcaacttagttaaataacaatagcagcataggcagatcacaacaacatcatgacttcataatatcaatttcatttcaacaacatcttaa 22799125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8946688 - 8946734
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaa 47  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||    
8946688 catgcagcttagttagataacaatagcaacataggcagtatacaaaa 8946734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 24529663 - 24529522
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaata-ttca 99  Q
    |||||||| |||||||||||||| | ||||| |   ||||||||||||||||||||| |||||||||||| ||||| | | |||| ||| || || ||||    
24529663 catgcagcatagttaaataacaacaacaacacatc-agtatacaaaaacagcatgacataataatatcaagtgcaagttaacaacgtctcaattatttca 24529565  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||||| ||| |  |||||||||||| ||||    
24529564 tatataattcaaataatgcatatacaattatatcacaatataa 24529522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 38967402 - 38967538
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| | | ||| |   | |||||||||| |||||||  |||||||||||| ||||| || |||||||||| || ||||||    
38967402 catgcagcttagttaaataacaacatcgacacaacaa-tatacaaaaatagcatgaaataataatatcaaatgcaagtcaatcaacatctcaattattca 38967500  T
100 aatattattcaagtaatgaataaaacattatatcacaa 137  Q
     |||| |||||| ||||| ||| |  ||||||||||||    
38967501 catataattcaattaatgcatatacaattatatcacaa 38967538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 19671861 - 19671995
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||  |||||||||| |  |||| | | |||||||| || ||||||    
19671861 catgcagcttagttaattaacaatcagcaacataggcagtatgcaaaa-catcatgatataataatatcgaacgcaagtaaacaacatctcaa-tattca 19671958  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
19671959 catataattcaagtaatgcatatacaattatatcaca 19671995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 23019789 - 23019705
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaa 92  Q
    ||||||||||||||||||||| |||||| ||   |||| |||| |||||| | |||||||||||| || |||| |||||||||||    
23019789 cttagttaaataacaatagcagcataggcagatcacaacaacaacatgacttcataatatcaatttcatttcaacaacatcttaa 23019705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28406007 - 28406103
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatat 96  Q
    |||||| ||||||||||||||||  ||||||||||| ||||| ||||| || |||||  ||| |||||| | ||||| ||| |||||||| ||||||    
28406007 catgcaacttagttaaataacaaacagcaacataggcagtatgcaaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 28406103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 142
Target Start/End: Complemental strand, 24642933 - 24642850
Alignment:
59 taataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||||||||||| ||||| ||| |||| ||| || |||||| |||| |||||||||||| ||| |  |||||||||||| ||||    
24642933 taataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacaatataa 24642850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22134296 - 22134251
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaa 46  Q
    ||||||||||||||||||| ||| ||||||||||| ||||| ||||    
22134296 catgcagcttagttaaatatcaacagcaacataggcagtatgcaaa 22134251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23038058 - 23038114
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgac 57  Q
    |||||||||| ||||||||||||||||| |||||| ||  ||||| ||||| |||||    
23038058 catgcagcttggttaaataacaatagcagcataggcagattacaacaacagtatgac 23038114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23040279 - 23040247
Alignment:
1 catgcagcttagttaaataacaatagcaacata 33  Q
    ||||||||||||||||||||||| |||||||||    
23040279 catgcagcttagttaaataacaacagcaacata 23040247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25175881 - 25175976
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatat 96  Q
    ||||||||||||||||||||| || ||||||||||| ||||| | ||| || |||||  ||| |||||| | ||||| ||| |||||||| ||||||    
25175881 catgcagcttagttaaataacaaacagcaacataggcagtatgc-aaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 25175976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 17487887 - 17488093
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
17487887 catgcagcttagttaaataacaacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 17487986  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| ||| |||||||||||||| |||||||| || ||||||||||||||||| |||||| |||||||||||| || ||||||||||    
17487987 atattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagattcacagattataattaacatcatcattaagtc 17488086  T
201 ttaatgc 207  Q
    |||||||    
17488087 ttaatgc 17488093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 13442305 - 13442510
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
13442305 catgcagcttagttaaataacaacggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 13442404  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
13442405 atattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtc 13442504  T
201 ttaatg 206  Q
    ||||||    
13442505 ttaatg 13442510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 20698525 - 20698322
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
20698525 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttatatattcaa 20698426  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| || ||||||||||||||| |||||||| |  ||||||||||| |||||||||||| |||||||||||| || ||||||||||    
20698425 atattcttcaagtaatgcat-aaacattatatcacatcataatcaacttcaacacatcttgaacagcttcacagattataattaacatcatcattaagtc 20698327  T
201 ttaat 205  Q
    |||||    
20698326 ttaat 20698322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 17499369 - 17499575
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
17499369 catgcagcttagttaaataacaacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 17499468  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| ||| |||||||||||||| || ||||| || ||||||||||||||||| |||||| |||||||||||| || ||||||||||    
17499469 atattcttcaagtaatgcatataacattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaattataattaacatcatcattaagtc 17499568  T
201 ttaatgc 207  Q
    |||||||    
17499569 ttaatgc 17499575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 12399240 - 12399446
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||    
12399240 catgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaaatattcaa 12399339  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||| |  |||||||||| |||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||| |||    
12399340 ataattctcaagtaatgcataagacattatatcacatcataatcaacaacaacacatcttaaatagcttcacagattatagttaacctcttcattatgtc 12399439  T
201 ttaatgc 207  Q
    |||||||    
12399440 ttaatgc 12399446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 26686918 - 26687117
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||||||| |    
26686918 catgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcca 26687017  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
26687018 ttatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtc 26687117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 43840963 - 43841162
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||    
43840963 catgcagcttagttaaataacaacaacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaa 43841062  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| || || |||||||    
43841063 ttatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcgttaagtc 43841162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 23083451 - 23083247
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||||    
23083451 catgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaacaacatcttaaatattcaa 23083352  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     | |  ||| ||||||| | | |||||||||||||| ||||||||  | |||||||||||||||||||||||| ||| |||||||| || ||| ||||||    
23083351 ttttacttctagtaatgcacataacattatatcacatcataatcaatatcaacacatcttaaacagcttcacagattgtaattaacatcatcactaagtc 23083252  T
201 ttaat 205  Q
    |||||    
23083251 ttaat 23083247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 8 - 205
Target Start/End: Complemental strand, 14576915 - 14576719
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattat 107  Q
    |||||||||||||||| ||||||||||  |||||| || ||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| |||  |    
14576915 cttagttaaataacaacagcaacatagacagtata-aacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattatact 14576817  T
108 tcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaat 205  Q
    |||||||||| ||| |||||||||||||| |||||||| || |||||||||||||||| ||||||| |||||||||||| || ||||||| |||||||    
14576816 tcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagattataattaacatcatcattaaatcttaat 14576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 14972885 - 14973085
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||| ||||| ||| |||||||| | |||| ||     
14972885 catgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctcatatatacat 14972984  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || |||||||||||| ||| |||||||||||||| |||||||| || |||||||||||||||||||||| | |||||||||||| || ||||||||||    
14972985 tcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcattaagtc 14973084  T
201 t 201  Q
    |    
14973085 t 14973085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 14572620 - 14572823
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||| ||||||||| |||||||||||||||  | ||| |||||||||||||||||||    
14572620 catgcagcttagttaaataacaacagcaacatagacagtatacaaaa-cagcatgacataataatatcaattgagagtcaacaacatcttaaatattcaa 14572718  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||| ||||||| |||||||||||||||| ||||| || ||  |||| |||||||||| ||||||| |||||||||||| || ||||||||||    
14572719 ttatacttcaaataatgaaaaaaacattatatcacatcataaacaacataaacaaatcttaaacaacttcacaaattataattaacatcatcattaagtc 14572818  T
201 ttaat 205  Q
    |||||    
14572819 ttaat 14572823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 24153298 - 24153115
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||| ||| |||||||||||||||||||    
24153298 catgcagcttagttaaataacgatagcaacataggtagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaa 24153200  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaa 185  Q
     |||  ||||| ||||| | | ||||| |||||||| |||||||| || |||||||||||||||||||||||| |||||||||||    
24153199 ttatacttcaaataatgcacataacataatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 24153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 42386441 - 42386627
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||| ||||| ||| |||||||| |||||||||     
42386441 catgcagtttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatattcat 42386540  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctt-aaacagcttcacatattataattaac 186  Q
      || ||||||| |||| ||| |||||||||||||| |||||||| || ||| ||||||| ||||||||||||| ||||| ||||||    
42386541 tcataattcaagcaatgcatataacattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagattatcattaac 42386627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 18438565 - 18438765
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||||| ||||| ||| |||||||||   ||| ||     
18438565 catgtagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacatcttttttatacat 18438664  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      ||   |||||||||| ||| |||||||||||||| |||| ||| || |||||||||||||||||||||||| |||||| ||||| || ||||||||||    
18438665 tcatatctcaagtaatgcatataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcatcattaagtc 18438764  T
201 t 201  Q
    |    
18438765 t 18438765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 25476475 - 25476275
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||| |||||||||||| ||||| ||||||| ||| ||||||||||||||||||||| |||||||||||| ||||| ||| |||||||| || ||| ||     
25476475 catgtagcttagttaaaaaacaacagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacat 25476376  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||   | |||||||||||||| ||| |||| || |||||||||||||||||||||||| ||| |||||||| || ||||||||||    
25476375 tcataattcaagtaatgcgcataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattgtaattaacatcctcattaagtc 25476276  T
201 t 201  Q
    |    
25476275 t 25476275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 11424849 - 11424653
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||| ||||||||| ||||   |||||||||| || ||| ||     
11424849 catgcagcttagttaaataacaacagcaacataggcagtatacaaaa-cagcatgacataacaatatcaatagcaa---atcaacatctcaattatgcat 11424754  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||  || |||||||||||||| ||||| || |  |||||||||||||||||||||||| |||| ||||||| ||  |||||||||    
11424753 tcataattcaagtaatgcgtataacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagattaaaattaacatcaacattaagtc 11424654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 93 - 207
Target Start/End: Original strand, 16796670 - 16796784
Alignment:
93 atattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttc 192  Q
    ||||||||||| |  |||||||||| |||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||||| |||||||    
16796670 atattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatattataattagcctcttc 16796769  T
193 attaagtcttaatgc 207  Q
    |||||||||||||||    
16796770 attaagtcttaatgc 16796784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 40213810 - 40213611
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||| |||||||||||||||||| | ||||| ||  |||||||| ||||| |||||| |||||||||||| ||||| ||| |||||||| || ||| ||     
40213810 catgtagcttagttaaataacaacatcaacacagc-agtatacataaacatcatgacataataatatcaaatgcaagtcaacaacatctcaattatacat 40213712  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || || |||||||||  || |||||||||||||| |||||||| || |||||||||||||||||||| ||| |||||||||||| || ||||||||||    
40213711 tcataatccaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacagattataattaacatcatcattaagtc 40213612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 30029871 - 30030073
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| ||||||| ||||||||||||| |||||  ||  ||||| ||||||||||| ||| ||||||| |||||||||| |||| ||||||||||||||    
30029871 catgcaacttagtttaataacaatagcagcatagacagattacaacaacagcatgacataagaatatcatttgcaattca-caacgtcttaaatattcaa 30029969  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      |   ||||||||||| | | |||||||||||||| ||||||||    ||| ||||||||||||||||||||||||||| | ||| || ||||||||||    
30029970 taaaacttcaagtaatgtacacaacattatatcacatcataatcaatgtcaaaacatcttaaacagcttcacatattatattaaacatcatcattaagtc 30030069  T
201 ttaa 204  Q
    ||||    
30030070 ttaa 30030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 14179555 - 14179653
Alignment:
93 atattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctctt 191  Q
    ||||||||||| |  |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||    
14179555 atattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttctt 14179653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 29172717 - 29172582
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
29172717 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 29172619  T
101 atattattcaagtaatgaataaaacattatatcacaa 137  Q
    |||| |||||||||||| ||| |  ||||||||||||    
29172618 atataattcaagtaatgcatatacaattatatcacaa 29172582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 7781481 - 7781341
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
7781481 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 7781383  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
7781382 atataattcaagtaatgcatatacaattatatcacaatataa 7781341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8899122 - 8899262
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
8899122 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 8899220  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
8899221 atataattcaagtaatgcatatacaattatatcacaatataa 8899262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9707741 - 9707601
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| | ||| ||| |||| ||| || ||||||     
9707741 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacagcatgacataataatatcaaatacaagtcaacaacgtctcaattattcac 9707643  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
9707642 atataattcaagtaatgcatatacaattatatcacaatataa 9707601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 17446789 - 17446649
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
17446789 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 17446691  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
17446690 atatcattcaagtaatgcatatacaattatatcacaatataa 17446649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 17463206 - 17463346
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
17463206 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 17463304  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
17463305 atataattcaagtaatgcatatacaattatatcacaatataa 17463346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 17672654 - 17672794
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
17672654 catgcagcttagttaaataacaacaacaacatagc-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 17672752  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||| ||||| ||| |  |||||||||||| ||||    
17672753 atataattcaaataatgcatatataattatatcacaatataa 17672794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 38962025 - 38961885
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
38962025 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 38961927  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
38961926 atataattcaagtaatgcatatacaattatatcacaatataa 38961885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 45607041 - 45606901
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
45607041 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 45606943  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
45606942 atataattcaagtaatgcatatacaattatatcacaatataa 45606901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 50242850 - 50242990
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
50242850 catgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacaacatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 50242948  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
50242949 atataattcaagtaatgcatatataattatatcacaatataa 50242990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 34159354 - 34159488
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
34159354 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 34159452  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
34159453 atataattcaagtaatgcatatacaattatatcaca 34159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 55476519 - 55476653
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
55476519 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 55476617  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
55476618 atataattcaagtaatgcatatacaattatatcaca 55476653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 12567588 - 12567728
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  | |||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
12567588 catgcagcttagttaaataacaacagcaacacagcaa-tatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 12567686  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
12567687 atataattcaagtaatgcatatataattatatcacaatataa 12567728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13544053 - 13544193
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  | |||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
13544053 catgcagcttagttaaataacaacagcaacacagcaa-tatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 13544151  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
13544152 atataattcaagtaatgcatatataattatatcacaatataa 13544193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 43550613 - 43550472
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||  | ||||||||| | ||||| |||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
43550613 catgcagcttagttaaataatgacagcaacatatgcagtatgcaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 43550514  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
43550513 atataattcaagtaatgtatatacaattatatcacaatataa 43550472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28848745 - 28848630
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
28848745 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 28848647  T
101 atattattcaagtaatg 117  Q
    |||| ||||||||||||    
28848646 atataattcaagtaatg 28848630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 53070787 - 53070652
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| |||||||||   |||||||||||||| || ||| |||||||||||| ||||| ||| |||| ||| || ||||||     
53070787 catgcagcttagttaaataacaacagcaacataac-agtatacaaaaacaacaagacataataatatcaaatgcaagtcaacaacgtctcaattattcac 53070689  T
101 atattattcaagtaatgaataaaacattatatcacaa 137  Q
    |||| |||||||||||| ||| |  ||||||||||||    
53070688 atataattcaagtaatgcatatacaattatatcacaa 53070652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 16454415 - 16454281
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
16454415 catgcaacttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 16454317  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
16454316 atataattcaagtaatgcatatacaattatatcaca 16454281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 6469268 - 6469128
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || || |||     
6469268 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattagtcac 6469170  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| ||| |||||||| ||| |  |||||||||||| ||||    
6469169 atataattgaagtaatgcatatacaattatatcacaatataa 6469128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 10247853 - 10247717
Alignment:
5 cagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatat 104  Q
    ||||||||||||||||||| |||| || |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || |||||| ||||    
10247853 cagcttagttaaataacaacagcagcacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatat 10247755  T
105 tattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||||||||||| ||| |  |||||||||||| ||||    
10247754 aattcaagtaatgcatatacaattatatcacaatataa 10247717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 16282945 - 16282805
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||  | ||||| ||| |||| ||| || ||||||     
16282945 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatattgaatgcaagtcaacaacgtctcaattattcac 16282847  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
16282846 atataattcaagtaatgcatatacaattatatcacaatataa 16282805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 13151925 - 13151790
Alignment:
1 catgcagctt-agttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||| ||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||    
13151925 catgcagctttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 13151827  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
13151826 catataattcaagtaatgcatatacaattatatcaca 13151790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 13154390 - 13154255
Alignment:
1 catgcagctt-agttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||| ||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||    
13154390 catgcagctttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 13154292  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
13154291 catataattcaagtaatgcatatacaattatatcaca 13154255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 41123918 - 41124055
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||||||||||   ||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
41123918 catgcagcttagttaaataacaa---caacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 41124013  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
41124014 atataattcaagtaatgcatatacaattatatcacaatataa 41124055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 46822296 - 46822395
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| ||||||||||||||||||||| |||||| ||  ||||  |||| || ||| ||| |||||||||||||||||| |||||||||||||||||||    
46822296 catgcaacttagttaaataacaatagcagcataggcagattacatcaacaacaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaa 46822395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12511088 - 12511187
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| ||||||||||||||||||||| |||||| ||  ||||  |||| || ||| ||| |||||||||||||||||| ||||||||| |||||||||    
12511088 catgcaacttagttaaataacaatagcagcataggcagattacatcaacaacaagacataaaaatatcaattgcaattcaacaacatcttcaatattcaa 12511187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 55500970 - 55501055
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacat 87  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| ||||||    
55500970 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacat 55501055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 12339890 - 12339986
Alignment:
93 atattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaa-cagcttcacatattataattaacctctt 191  Q
    ||||||||||| |  |||||| ||| ||||||||||||||||||      ||| ||||||||||||||||| ||||||||||||||||||||| ||||||    
12339890 atattcaaataattctcaagtgatgcataaaacattatatcaca------tcaacaacaacacatcttaaaacagcttcacatattataattagcctctt 12339983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15412457 - 15412531
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa 76  Q
    ||||||||||||||||||||||| ||| ||| ||  ||||||||||||||||||||| |||||||||||| |||||    
15412457 catgcagcttagttaaataacaacagcgacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaa 15412531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15977543 - 15977645
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
15977543 catgcagcttagttaaataacaacagcaacacaat-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 15977641  T
101 atat 104  Q
    ||||    
15977642 atat 15977645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 36166626 - 36166739
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||| ||| ||  ||||||||||| ||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
36166626 catgcagcttagttaaataacaacagcgacacagc-agtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 36166723  T
101 atattattcaagtaat 116  Q
      || |||||||||||    
36166724 tcataattcaagtaat 36166739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8499546 - 8499620
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa 76  Q
    ||||||||||||||||||||||| ||| ||| ||  |||||||||||||| |||||| |||||||||||| |||||    
8499546 catgcagcttagttaaataacaacagcgacacagt-agtatacaaaaacaacatgacataataatatcaaatgcaa 8499620  T

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Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12119859 - 12119785
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa 76  Q
    |||||||||| |||||||||||| ||| ||| ||  ||||||||||||||||||||| |||||||||||| |||||    
12119859 catgcagctttgttaaataacaacagcgacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaa 12119785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21618477 - 21618590
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||| ||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
21618477 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 21618574  T
101 atattattcaagtaat 116  Q
      || |||||||||||    
21618575 tcataattcaagtaat 21618590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44494837 - 44494905
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaa 70  Q
    ||||||||||||||||||||||| ||| ||| ||  |||||||||||||||||| || ||||||||||||    
44494837 catgcagcttagttaaataacaacagcgacacagc-agtatacaaaaacagcataacataataatatcaa 44494905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 24340813 - 24340678
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||| ||||||| ||||||||| | ||||| || || || |||||  |||||||||| |  |||| | | |||||||| |||||||||    
24340813 catgcagcttagttaattaacaatcagcaacatatgcagtatgcacaa-catcatgatataataatatcgaacgcaagtaaacaacatctcaaatattca 24340715  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
24340714 catataattcaagtaatgcatatacaattatatcaca 24340678  T

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Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 52523819 - 52523682
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacag--catgacgtaataatatcaattgcaattcatcaacatcttaaatatt 97  Q
    |||||||||||||||||||||||  | ||||||||| ||||| ||||| |||  |||||  ||| |||||| | ||||| ||| |||||||| ||| |||    
52523819 catgcagcttagttaaataacaaacaacaacataggcagtatgcaaaa-cagttcatgatataacaatatcgaatgcaaatcaacaacatctcaaacatt 52523721  T
98 caaatattattcaagtaatgaataaaacattatatcaca 136  Q
    || |||| |||||||||||| ||| |  |||||||||||    
52523720 catatataattcaagtaatgcatatacaattatatcaca 52523682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13210417 - 13210371
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaa 46  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||    
13210417 catgcagcttagttaaataacaaatagcaacataggcagtatgcaaa 13210371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 2051227 - 2051154
Alignment:
63 aatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    |||||||| ||||| ||| |||||||| ||| ||||| |||| |||||||||||| ||| |  |||||||||||    
2051227 aatatcaaatgcaaatcaacaacatctcaaacattcatatataattcaagtaatgcatatacaattatatcaca 2051154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14234518 - 14234610
Alignment:
1 catgcagcttagttaaataacaa-tagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaa 93  Q
    |||||||||||||||||||||||  ||||||||||| ||||| | ||| || |||||  ||| |||||| | ||||| ||||||||||| ||||    
14234518 catgcagcttagttaaataacaagcagcaacataggcagtatgc-aaatcatcatgatataacaatatcgaatgcaagtcatcaacatcataaa 14234610  T

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Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15470955 - 15471043
Alignment:
1 catgcagcttagttaaataaca-atagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatct 89  Q
    |||||||||||||||||||||| | ||||||||||| ||||| | ||| || |||||  ||| |||||| | ||||| ||||||||||||    
15470955 catgcagcttagttaaataacagacagcaacataggcagtatgc-aaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 15471043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 14665428 - 14665460
Alignment:
1 catgcagcttagttaaataacaatagcaacata 33  Q
    |||||| ||||||||||||||||||||||||||    
14665428 catgcaacttagttaaataacaatagcaacata 14665460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 53301634 - 53301527
Alignment:
8 cttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattca-tcaacatcttaaatattcaaatatt 105  Q
    |||||||||||||| || ||||||||||  ||||| | |||||| |||||  ||| |||||||| ||||| ||| |||| |||| ||||||||| ||||     
53301634 cttagttaaataacaaacagcaacatagacagtatgc-aaaacaacatgatataacaatatcaaatgcaagtcattcaatatctcaaatattcatatata 53301536  T
106 attcaagta 114  Q
    |||||||||    
53301535 attcaagta 53301527  T

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Target: scaffold0292 (Bit Score: 141; Significance: 4e-74; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 3501 - 3705
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||| |||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
3501 catgtagcttagttaaataactaaagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 3600  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||| | |||||||||||| || ||||||||||    
3601 atattcttcaagtaatgcaaataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcctcattaagtc 3700  T
201 ttaat 205  Q
    |||||    
3701 ttaat 3705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 374 - 573
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| |  |||||||| |||||||||||  |||||||||||||||||||||||| || ||| ||||||||||||||||| |    
374 catgcagcttagttaaataacaacaataacataggcagtatacaaaat-agcatgacgtaataatatcaattggaagtcaacaacatcttaaatattcga 472  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||| |||||||||||||| || ||||||||||    
473 ttatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatatattataattaacatcctcattaagtc 572  T

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Target: scaffold0016 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 1882 - 2086
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
1882 catgcagcttagttaaataacaacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 1981  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||| ||||||||| |||||||||||| || ||||||||||    
1982 atattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaacatcctcattaagtc 2081  T
201 ttaat 205  Q
    |||||    
2082 ttaat 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 4e-74; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 20536239 - 20536443
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
20536239 catgcagcttagttaaataacaacagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 20536338  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| | | |||||||||||||| |||||||  || |||||||||||||||| ||||||| |||||||||||| || ||||||||||    
20536339 atattcttcaagtaatgcacataacattatatcacatcataatcgacatcaacacatcttaaacaacttcacagattataattaacatcctcattaagtc 20536438  T
201 ttaat 205  Q
    |||||    
20536439 ttaat 20536443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21919090 - 21918886
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
21919090 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaa 21918991  T
101 at-attattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    || ||| ||||||||||| || ||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||  ||||||||||| || ||||||    
21918990 ataattcttcaagtaatgcat-aaacattatatcacatcataatcagcagcaacacatcttaaacagcttcacagatcgtaattaacctcatcgttaagt 21918892  T
200 cttaat 205  Q
    ||||||    
21918891 cttaat 21918886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 18818499 - 18818295
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||| || ||||||||||||||||    
18818499 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaacatcatcttaaatattcaa 18818400  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
18818399 ttatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtc 18818300  T
201 ttaat 205  Q
    |||||    
18818299 ttaat 18818295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 28649134 - 28648934
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||||| ||||| ||| ||||||||||| ||| ||     
28649134 catgcagcttagttaaataacaaaagcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaattatacat 28649035  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||  || |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| || ||||||||||    
28649034 tcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcatcattaagtc 28648935  T
201 t 201  Q
    |    
28648934 t 28648934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 23406410 - 23406611
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaa--catcttaaatattc 98  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||||| ||| ||   ||||||||||||||    
23406410 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacatatcatcttaaatattc 23406509  T
99 aaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaag 198  Q
    || |||  ||||||||||| | | ||||||||||||||||||| ||| || |||||||||||||||| |||||||||||||||||||| || ||||||||    
23406510 aattatacttcaagtaatgcacataacattatatcacaacatagtcaacatcaacacatcttaaacaacttcacatattataattaacatcctcattaag 23406609  T
199 tc 200  Q
    ||    
23406610 tc 23406611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21924018 - 21923814
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||||||| |||||| | |||||||||||||||| ||| |||||||||||||||||||    
21924018 catgcagcttagttaaataacaacagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaacaacatcttaaatattcaa 21923919  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | ||| |||| |  || |||||||| ||||||||||||||||||||||||||| |||||||||||| || ||||||||||    
21923918 ttatacttcaagtaatgcacataaccttattttgcatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcatcattaagtc 21923819  T
201 ttaat 205  Q
    |||||    
21923818 ttaat 21923814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 31971288 - 31971490
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||| |||||||||||||| ||||||||||||||||||  ||| |||    
31971288 catgcagcttagttaaataacaacagcaacataggcagtatacaaaa-caacatgacataataatatcaattccaattcatcaacatcttatgtatacaa 31971386  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| ||||| |||||||||||| |||||||| |||||||| |||||| ||| ||||||| ||||||||||||||| |  |||||||    
31971387 atattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacaacatatcttatacatcttcacagattataattaacctcattgttaagtc 31971485  T
201 ttaat 205  Q
    |||||    
31971486 ttaat 31971490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 7372809 - 7373001
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||    
7372809 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaa 7372908  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  |||||||||||         ||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
7372909 ttatacttcaagtaatg--------cttatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtc 7373000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22626767 - 22626966
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||| |||||||||||| | ||| ||| |||||||||||||||||||    
22626767 catgcagcttagttaaataacaacagcaacataggcagtatacaaaa-caacatgacataataatatcaaatacaaatcaacaacatcttaaatattcaa 22626865  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  |||||||||||  || |||||||||||||| ||| |||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
22626866 ttatacttcaagtaatgtgtataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtc 22626965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 18879321 - 18879121
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||     || ||||||||||||||||||||||||||||||||||||||||||    
18879321 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaaca-----acataataatatcaattgcaattcatcaacatcttaaatattcaa 18879227  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| |||||||||||   | |||||||||||||| |||||||| || || |||||||| | |||||||||| |||||| ||||| || ||||||||||    
18879226 atattcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatctt-atcagcttcacagattatagttaacatcatcattaagtc 18879128  T
201 ttaatgc 207  Q
    || ||||    
18879127 ttgatgc 18879121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 45131086 - 45130884
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa-ttcatcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||  ||||||||| |||||||||||||| ||| |||||||||||||||  ||| ||    
45131086 catgcagcttagttaaataacaacagcaacataggcagtaaacaaa--cagcatgacataataatatcaatttcaaattcatcaacatcttaggtataca 45130989  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    | |||| ||||||||||| ||||| |||||||||||| |||||||| |||||||| |||||| ||||||||||| ||||||||||||||| | |||||||    
45130988 attattcttcaagtaatgcataaa-cattatatcacatcataatcatcaacaacaaatcttatacagcttcacagattataattaacctcattattaagt 45130890  T
200 cttaat 205  Q
    ||||||    
45130889 cttaat 45130884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 23648584 - 23648788
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| ||||||||| |||||||||||||||||| ||  ||||| |||| |||||| ||||||||||| ||||||| || |||||||||||||||||||    
23648584 catgcaacttagttaattaacaatagcaacataggcagattacaacaacaacatgacataataatatcatttgcaatacaacaacatcttaaatattcaa 23648683  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      |   ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||| ||| |||||||||||| || |||||| |||    
23648684 taaaacttcaagtaatgcacacaacattatatcacatcataatcaacatcaacacatcttaaacagcttaacagattataattaacatcatcattaggtc 23648783  T
201 ttaat 205  Q
    |||||    
23648784 ttaat 23648788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 16092432 - 16092231
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
16092432 catgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 16092333  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctt-aaacagcttcacatattataattaacctcttcattaagt 199  Q
      || ||| ||||||||  || |||||||||||||| |||||||| || ||||||||||| ||||| |||| ||||||||||||||| || || ||||||    
16092332 tcataatttaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacaacttcgcatattataattaacatcatccttaagt 16092233  T
200 ct 201  Q
    ||    
16092232 ct 16092231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16199734 - 16199532
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  ||||||||||  ||||| ||||  || |||||| |||||||||||||| ||||||||| ||||||||  ||| ||    
16199734 catgcagcttagttaaataacaaacagcaacatagacagtattcaaa--caacatgacataataatatcaatttcaattcatctacatcttaggtataca 16199637  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    |||||| ||||||||||| ||||| |||||||| ||| |||||||| |||||||| |||||| ||||||||||| ||||||||||||||| |  ||||||    
16199636 aatattcttcaagtaatgcataaa-cattatattacatcataatcaacaacaacatatcttatacagcttcacagattataattaacctcattgttaagt 16199538  T
200 cttaat 205  Q
    ||||||    
16199537 cttaat 16199532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 6759289 - 6759487
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||| |||||||||||| |||||    ||||||||| || ||| ||     
6759289 catgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacaacatgacataataatatcaaatgcaa---gtcaacatctcaattatacac 6759385  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctt-aaacagcttcacatattataattaacctcttcattaagt 199  Q
      || |||||| |||||  || |||||||||||||| |||||||| || ||||||||||| ||||||||||||| |||||||||||| || |||||||||    
6759386 tcataattcaattaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatcatcattaagt 6759485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 22875096 - 22875281
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||| ||  ||||||| ||| ||||||||||| || |||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
22875096 catgcagcttagttaaatagcagcagcaacacaggcagtatacaaaa-caacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 22875194  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctt-aaacagcttcacatattataattaac 186  Q
      || ||||||||||||  || |||||||||||||| |||||||| || ||||||||||| ||||||||||||| ||||||||||||    
22875195 tcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaac 22875281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 25363138 - 25363026
Alignment:
93 atattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttc 192  Q
    ||||||||||| |  |||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||    
25363138 atattcaaataattctcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttc 25363039  T
193 attaagtcttaat 205  Q
    |||||||||||||    
25363038 attaagtcttaat 25363026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 21389540 - 21389358
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  | ||||||||| |||||||||   ||||||||| |||| ||||||| | ||||||||||||||||||  ||| ||    
21389540 catgcagcttagttaaataacaaacaacaacataggtagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgtataca 21389444  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaac 186  Q
    || ||| ||||||||||| || |||||||||| |||  |||||||| |||||||| ||||||  ||||||||||||||| |||||||    
21389443 aacattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacatattacaattaac 21389358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 14409578 - 14409438
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
14409578 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 14409480  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
14409479 atataattcaagtaatgcatatacaattatatcacaatataa 14409438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 16413450 - 16413310
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
16413450 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 16413352  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
16413351 atataattcaagtaatgcatatataattatatcacaatataa 16413310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 21778866 - 21778697
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  | ||||||||| |||||||||   ||||||||| |||| ||||||| | ||||||||||||||||||  ||| ||    
21778866 catgcagcttagttaaataacaaacaacaacataggtagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgtataca 21778770  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcaca 173  Q
    || ||| ||||||||||| || |||||||||| |||  |||||||| |||||||| ||||||  ||||||||||    
21778769 aacattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 1484430 - 1484570
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
1484430 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 1484528  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
1484529 atataattcaagtaatgcatatacaattatatcacaatataa 1484570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5853426 - 5853286
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
5853426 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 5853328  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
5853327 atataattcaagtaatgcatatacaattatatcacaatataa 5853286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 20403255 - 20403395
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
20403255 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 20403353  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
20403354 atataattcaagtaatgcatatacaattatatcacaatataa 20403395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 21396070 - 21395883
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  | ||||||||| |||||||||   ||||||||  |||| ||||||| | ||||||||||||||||||  ||| ||    
21396070 catgcagcttagttaaataacaaacaacaacataggcagtatacaa---cagcatgagataattatatcaaattcaattcatcaacatcttatgtataca 21395974  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctctt 191  Q
    || ||| ||||||||||| || |||||||||| |||  ||||||||  ||||||| ||||||  |||||||||| |||| ||||||| ||||    
21395973 aacattcttcaagtaatgcat-aaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttctt 21395883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 21790563 - 21790376
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  | ||||||||| |||||||||   ||||||||  |||| ||||||| | ||||||||||||||||||  ||| ||    
21790563 catgcagcttagttaaataacaaacaacaacataggcagtatacaa---cagcatgagataattatatcaaattcaattcatcaacatcttatgtataca 21790467  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctctt 191  Q
    || ||| ||||||||||| || |||||||||| |||  ||||||||  ||||||| ||||||  |||||||||| |||| ||||||| ||||    
21790466 aacattcttcaagtaatgcat-aaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttctt 21790376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 41598216 - 41598356
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||| |||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
41598216 catgcagcttagttgaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 41598314  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
41598315 atataattcaagtaatgcatatacaattatatcacaatataa 41598356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 22001781 - 22001915
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
22001781 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 22001879  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
22001880 atataattcaagtaatgcatatacaattatatcaca 22001915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15203365 - 15203225
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| || || ||| |||| ||| || ||||||     
15203365 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgtaagtcaacaacgtctcaattattcac 15203267  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
15203266 atataattcaagtaatgcatatacaattatatcacaatataa 15203225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18678192 - 18678093
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| ||||||||||||||||||||| |||||| ||  ||||  ||||||| ||| ||| |||||||||||||||||| |||||||||||||||||||    
18678192 catgcaacttagttaaataacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaa 18678093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32121763 - 32121862
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| ||||||||||||||||||||| |||||| ||  ||||  ||||||| ||| ||| |||||||||||||||||| |||||||||||||||||||    
32121763 catgcaacttagttaaataacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaa 32121862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20046329 - 20046189
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || |||| |     
20046329 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattatttac 20046231  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
20046230 atataattcaagtaatgcatatacaattatatcacaatataa 20046189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 4483309 - 4483442
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||| |||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
4483309 catgcagcttagttaa-taacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 4483406  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
4483407 atataattcaagtaatgcatatacaattatatcaca 4483442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 4542507 - 4542373
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   || |||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
4542507 catgcagcttagttaaataacaacagcaacacaacaag-atacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 4542409  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    ||||  ||||||||||| ||| |  |||||||||||    
4542408 atatagttcaagtaatgcatatacaattatatcaca 4542373  T

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Target: chr8; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 19896293 - 19896436
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaat---aatatcaattgcaattcatcaacatcttaaatatt 97  Q
    ||||||||||||||||||||||| ||||||| |  | |||||||||||||||||||| ||||   |||||||| ||||| ||| |||| ||| || ||||    
19896293 catgcagcttagttaaataacaacagcaacacaacg-gtatacaaaaacagcatgacataataataatatcaaatgcaagtcaacaacgtctcaattatt 19896391  T
98 caaatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    || |||| |||||||||||| ||| |  |||||||||||| ||||    
19896392 cacatataattcaagtaatgcatatacaattatatcacaatataa 19896436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 25484374 - 25484268
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || |||||| |||| |||||||||||| ||| |  |||||||||||    
25484374 agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcaca 25484275  T
137 acataat 143  Q
    | |||||    
25484274 atataat 25484268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 14823836 - 14823941
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || |||||| |||| |||||||||||| ||| |  |||||||||||    
14823836 agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcaca 14823935  T
137 acataa 142  Q
    | ||||    
14823936 atataa 14823941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19801515 - 19801376
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||||||||||| |   ||||||||||| ||||||||| ||||||||||||  |||| ||| |||| ||| || ||||||     
19801515 catgcagcttagttaaataacaatagcaacacaac-agtatacaaaa-cagcatgacataataatatcaaacgcaagtcaacaacgtctcaattattcac 19801418  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||| ||||| ||||    
19801417 atataattcaagtaatgcatatacaattataacacaatataa 19801376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 26223947 - 26224087
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||| ||||||||||| ||||| | ||  | |||||||||| |||||||| |||||||||||| ||||| ||| |||||||| || ||||||     
26223947 catgcagcttaattaaataacaacagcaataaagcaa-tatacaaaaatagcatgacataataatatcaaatgcaagtcaacaacatctcaattattcac 26224045  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| ||| || ||||| ||| |  |||||||||||| ||||    
26224046 atataatttaattaatgcatatacaattatatcacaatataa 26224087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15070586 - 15070660
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa 76  Q
    ||||||||||||||||||||||| ||| ||| ||  ||||||||||||||||||||| |||||||||||| |||||    
15070586 catgcagcttagttaaataacaacagcgacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaa 15070660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45290829 - 45290761
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaa 70  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||||||||||||| ||||||||||||    
45290829 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaa 45290761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 13508175 - 13508040
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||| ||||||| ||||||||||| | ||| || || || |||||  |||||||||| |  |||| | | |||||||| |||||||||    
13508175 catgcagcttagttaattaacaatcagcaacataggcaatatgcacaa-catcatgatataataatatcgaacgcaagtaaacaacatctcaaatattca 13508077  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
13508076 catataattcaagtaatgcatatacaattatatcaca 13508040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 20498593 - 20498728
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||| |||||||||  |||||  ||||||||||| |||||  ||||  |||||||  ||| |||||||| ||||| |||||||||||| ||| |||||    
20498593 catgcaacttagttaataaacaaacagcaacataggcagtatgtaaaat-agcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattca 20498691  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
20498692 tatataattcaagtaatgtatatacaattatatcaca 20498728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19937140 - 19937066
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa 76  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||||||||||||| |||||| ||||| |||||    
19937140 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataagatcaaatgcaa 19937066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26219745 - 26219858
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||| ||| ||  |||||||||||  || ||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
26219745 catgcagcttagttaaataacaacagcgacacagc-agtatacaaaat-agtatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 26219842  T
101 atattattcaagtaat 116  Q
      || |||||||||||    
26219843 tcataattcaagtaat 26219858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 13597707 - 13597572
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||| ||||||| ||||||||| | || || ||||| || |||||  |||||||||| |  |||| | | |||||||  |||||||||    
13597707 catgcagcttagttaattaacaatcagcaacataagcagaatgcaaaa-catcatgatataataatatcgaacgcaagtaaacaacatcccaaatattca 13597609  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
13597608 catataattcaagtaatgcatatacaattatatcaca 13597572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23776925 - 23776834
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaa 92  Q
    |||||| |||||||||||||| |||||| |||||| ||   |||| | ||||||||| |  ||||||||||| || |||| |||||||||||    
23776925 catgcaacttagttaaataactatagcagcataggcagatcacaacatcagcatgacttcttaatatcaatttcatttcaacaacatcttaa 23776834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 983496 - 983450
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaa 46  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||    
983496 catgcagcttagttaaataacaatcagcaacataggcagtatgcaaa 983450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6520399 - 6520491
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaa 93  Q
    ||||||||||||||||||||| || ||||||||||| ||||| | ||| || |||||  ||| |||||| | ||||| ||||||||||| ||||    
6520399 catgcagcttagttaaataacaaacagcaacataggcagtatgc-aaatcatcatgatataacaatatcgaatgcaagtcatcaacatcataaa 6520491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38855341 - 38855246
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatat 96  Q
    ||||||||||||||||||||| || ||||||||||| ||||| | ||| || |||||  ||| |||||| | ||||| ||| |||||||| ||||||    
38855341 catgcagcttagttaaataacaaacagcaacataggcagtatgc-aaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 38855246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 6214 - 6005
Alignment:
1 catgcagcttagttaaataacaatagcaaca---tagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatatt 97  Q
    ||||||||||||||||||||||| | |||||   |||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
6214 catgcagcttagttaaataacaacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatcaacatcttaaatatt 6115  T
98 caaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaa 197  Q
    |||||||| ||||||||||| | | |||||||||||||| |||||||| || ||||||||||||||||||||||||| ||||||||||| || |||||||    
6114 caaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacattttataattaacatcatcattaa 6015  T
198 gtcttaatgc 207  Q
    ||||||||||    
6014 gtcttaatgc 6005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 4880 - 5082
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||| |||||||    
4880 catgcagattagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaagtattcaa 4979  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||| |  |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||  ||||| ||||||||||||    
4980 ataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattatagctaaccccttcattaagtc 5079  T
201 tta 203  Q
    |||    
5080 tta 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 24393 - 24187
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaa-acagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||    
24393 catgcagcttagttaaataacaacagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattca 24294  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa-tcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaag 198  Q
    |||||| ||||||||||| | | |||||||||||||| ||||| ||| || |||||||||||||||||||||||| |||||||||||| || ||| ||||    
24293 aatattcttcaagtaatgcacataacattatatcacatcataattcaacatcaacacatcttaaacagcttcacagattataattaacatcctcaataag 24194  T
199 tcttaat 205  Q
    |||||||    
24193 tcttaat 24187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 6 - 205
Target Start/End: Original strand, 20946 - 21146
Alignment:
6 agcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatat 104  Q
    ||||||||||| ||||||| ||||||||||| | ||| |||||||| |||||| |||||||||||||||||||||| |||||||||| |||||||||| |    
20946 agcttagttaattaacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattcaaatgt 21045  T
105 tattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaa 204  Q
    | | ||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||    
21046 tctacaagtaatgcataaaacattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaacatcttcattaagtcttaa 21145  T
205 t 205  Q
    |    
21146 t 21146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 121; Significance: 3e-62; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 38792 - 38995
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||| | | |||||||||||||||||||    
38792 catgcagcttaattaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaaataaacaacatcttaaatattcaa 38890  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
38891 ttatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtc 38990  T
201 ttaat 205  Q
    |||||    
38991 ttaat 38995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 32973 - 33153
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||| | | |||||||||||||||||||    
32973 catgcagcttaattaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaa 33071  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataat 182  Q
     |||  ||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||||| ||||||||    
33072 ttatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataat 33153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9777 - 9918
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaata-ttca 99  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||| ||||| |||||||||||| ||||| ||| |||| ||| || || ||||    
9777 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagaatgacataataatatcaagtgcaagtcaacaacgtctcaattatttca 9875  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||||| ||| |  |||||||||||| ||||    
9876 catataattcaaataatgcatatacaattatatcacaatataa 9918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 117; Significance: 8e-60; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 1983 - 2187
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||| |||||| ||| ||||||| ||||||||||| || |||||| |||| ||||||||||||||||| |||||||||||||||||||    
1983 catgcagcttagttaattaacaacagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaacaacatcttaaatattcaa 2082  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    | ||||||||||||||| ||||||||||||||| || |||||||| |||||||| ||| || ||||||| ||||||||| | ||||||  ||||||||||    
2083 acattattcaagtaatgcataaaacattatatctcatcataatcaacaacaacatatcatatacagctttacatattattaataaccttatcattaagtc 2182  T
201 ttaat 205  Q
    |||||    
2183 ttaat 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 8619 - 8424
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||   |||||||||| ||||| ||||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||    
8619 catgcagcttagttaaataaca---gcaacataggcagtat-caaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaa 8524  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
8523 ttatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtc 8424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 13147 - 13322
Alignment:
25 agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaa 124  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||||||||| |||  ||||||||||| | | ||    
13147 agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacataa 13246  T
125 cattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||| |||||||||||| |||||||||||||    
13247 cattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatcttcattaagtc 13322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 15553 - 15351
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||| |||||||||||||| ||||||||||||||||||  |||  ||    
15553 catgcagcttagttaaataacaagagcaacataggcagtatacaaaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtataaaa 15455  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| |||||  ||||||||||| |||||||| |||||||| |||||| ||||||||||| ||||||||||||||  | ||||||||    
15454 atattcttcaagtaatgcataaat-attatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaaccttattattaagtc 15356  T
201 ttaat 205  Q
    |||||    
15355 ttaat 15351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 32098 - 32299
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||  || |||||| |||||||||||||| ||||||||||||||||||  ||| |||    
32098 catgcagcttagttaaataacaacagcaacataggcagtaaacaaa--caacatgacataataatatcaatttcaattcatcaacatcttaggtatacaa 32195  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||||| ||||| |||||||||||| |||||||| |||| ||| |||||| ||||||||||| ||||||||||||||| |  |||||||    
32196 atattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtc 32294  T
201 ttaat 205  Q
    |||||    
32295 ttaat 32299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22914 - 23113
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||||||    
22914 catgcagcttagttaaataacaacagcaacacacc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaa 23012  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | |||||||||||||| | |||||| || |||||||||||||||||||||||| ||||||| |||| || ||||||||||    
23013 ttatacttcaagtaatgcacataacattatatcacatcgtaatcaacatcaacacatcttaaacagcttcacagattataaataacatcatcattaagtc 23112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 124675 - 124822
Alignment:
60 aataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatct 159  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||||| || ||||||||||    
124675 aataatatcaattgcaattcatcaacgttttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatct 124774  T
160 taaacagcttcacatattataattaacctcttcattaagtcttaatgc 207  Q
    |||||||||||||| |||||||||||| || |||||||||||||||||    
124775 taaacagcttcacagattataattaacatcctcattaagtcttaatgc 124822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 174797 - 174930
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||||||| || ||||||||||| |||||||   ||||||||||| | || ||||||| | ||||||| |||||||| ||  |||||    
174797 catgcagcttagttaaataacaaacagcaacataggcagtatac---aacagcatgacatgattatatcaaattcaattcaacaacatctcaatcattca 174893  T
100 aatattattcaagtaatg-aataaaacattatatcac 135  Q
       || |||||||||||| ||  ||||||||||||||    
174894 ttcataattcaagtaatgcaactaaacattatatcac 174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 25927 - 26132
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||  | |||||| |||||||||||| ||||| | | |||||||| ||||||||||    
25927 catgaagcttagttaaataacaatagcaacataggcagtatacaaaat-atcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaa 26025  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| ||  |||||||||||||| |||||||| || |||| ||||||||||||||||||| |||||||||||| || ||||||||||    
26026 ttatacttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcctcattaagtc 26125  T
201 ttaatgc 207  Q
    | |||||    
26126 tcaatgc 26132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 39889 - 40094
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||  | |||||| |||||||||||| ||||| | | |||||||| ||||||||||    
39889 catgaagcttagttaaataacaatagcaacataggcagtatacaaaat-atcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaa 39987  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| ||  |||||||||||||| |||||||| || |||| ||||||||||||||||||| |||||||||||| || ||||||||||    
39988 ttatacttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaattataattaacatcctcattaagtc 40087  T
201 ttaatgc 207  Q
    | |||||    
40088 tcaatgc 40094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 3240 - 3041
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
3240 catgcagcttagttaaataacaacagcaacataggcagtatacaaaa-caacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 3142  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || |||||||||||| ||| |||||||||||||| |||||||| || |||| |||||||||||||||||||  ||||||||||| || ||||||||||    
3141 tcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggttataattaacatcatcattaagtc 3042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 13528 - 13730
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||| | |||||||||||| | ||||||||||||||||  ||| |||    
13528 catgcagcttagttaaataacaacagcaacataggcagtatacaaaa-caacatgacatgataatatcaatttcgattcatcaacatcttatgtatacaa 13626  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    | ||| ||||||||||| ||||| |||||||||||| |||||||| |||| ||| |||||| ||||||||||| ||||||||||||||| |  |||||||    
13627 acattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtc 13725  T
201 ttaat 205  Q
    |||||    
13726 ttaat 13730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 4743 - 4946
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||| ||||||  ||| |||    
4743 catgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaa 4842  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
    ||||| ||||||||| | || ||||||||||||||| |||||||| |||||||| |||||| ||| ||||||| |||||| |||||||| |  |||||||    
4843 atattcttcaagtaaggcat-aaacattatatcacatcataatcaacaacaacatatcttatacaacttcacagattatacttaacctcattgttaagtc 4941  T
201 ttaat 205  Q
    |||||    
4942 ttaat 4946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 37 - 205
Target Start/End: Original strand, 3 - 170
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    ||||||||||||||||||||| |||  | ||||||||||||||||||| ||||||  ||| |||||||| ||||||||| | ||||| ||||||||||||    
3 agtatacaaaaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaa-cattatatcaca 101  T
137 acataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaat 205  Q
     |||||||| |||||||| |||||| ||| ||||||| |||||| |||||||| |  ||||||||||||    
102 tcataatcaacaacaacatatcttatacaacttcacagattatacttaacctcattgttaagtcttaat 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 101; Significance: 3e-50; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 26155 - 25955
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| || |||||| |||| ||| || ||| ||     
26155 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaacaacgtctcaagtatacat 26056  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||  |  |||||||||||||| |||||||| || |||||||||||||||||||||| | |||||||||||| || ||||||||||    
26055 tcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcattaagtc 25956  T
201 t 201  Q
    |    
25955 t 25955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 44797 - 44682
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
44797 catgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 44698  T
101 atattattcaagtaat 116  Q
      || |||||||||||    
44697 tcataattcaagtaat 44682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 33480 - 33385
Alignment:
106 attcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtct 201  Q
    ||||||||||||  |  |||||||||||||| |||||||| || |||| ||||||||||||||||| |  ||||||||||| || |||||||||||    
33480 attcaagtaatgcgtttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcatcattaagtct 33385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 8510 - 8710
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||||| ||||||    
8510 catgcagcttggttaaataacaatagcaacataggtagtatacaaaaacagtatgacataataatatcaattgcaagtcaacaacatcttaaacattcaa 8609  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     | |  ||||||||||| | | |||||||    ||| |||||||| || ||||||||| |||||||||||||| ||| |||||||| || ||||||||||    
8610 gtgtacttcaagtaatgcacataacatta----acatcataatcaacatcaacacatcctaaacagcttcacagattgtaattaacatcatcattaagtc 8705  T
201 ttaat 205  Q
    |||||    
8706 ttaat 8710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 99; Significance: 5e-49; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 4544 - 4738
Alignment:
7 gcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatatta 106  Q
    ||||||||||||||||| ||||||| | | |||||| |||||||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||   || |    
4544 gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataa 4643  T
107 ttcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtct 201  Q
    |||||||||||  || |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || |||||||||||    
4644 ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtct 4738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 12126 - 12320
Alignment:
7 gcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatatta 106  Q
    ||||||||||||||||| ||||||| | | |||||| |||||||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||   || |    
12126 gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataa 12225  T
107 ttcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtct 201  Q
    |||||||||||  || |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || |||||||||||    
12226 ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtct 12320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 22078 - 22272
Alignment:
7 gcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatatta 106  Q
    ||||||||||||||||| ||||||| | | |||||| |||||||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||   || |    
22078 gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataa 22177  T
107 ttcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtct 201  Q
    |||||||||||  || |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || |||||||||||    
22178 ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtct 22272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 39508 - 39707
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
39508 catgcagcttagttaaataacaacaacaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 39606  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || |||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||| | |||||||||||| || | ||||||||    
39607 tcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcattattaagtc 39706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 75304 - 75105
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||| |||||||||||| ||||| ||| |||||||| |||||| ||     
75304 catgcagcttagttaaataacaacaacaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacat 75206  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || |||||||||||| | | |||||||||||||| |||||||| || |||||||||||||||||||||| | |||||||||||| || | ||||||||    
75205 tcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcattattaagtc 75106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 6669 - 6845
Alignment:
29 acatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacatt 128  Q
    ||||||| ||||||||||| || |||||| |||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||| ||||||| ||    
6669 acataggcagtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgtt 6768  T
129 atatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaat 205  Q
    |||||||| |||||||| |||||||| ||| || ||||||| ||| ||||||| ||||||  ||||||| |||||||    
6769 atatcacatcataatcaacaacaacatatcatatacagctttacagattataaataaccttatcattaaatcttaat 6845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 39944 - 40143
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||| |||||||||||| ||||  |||  |||||||||||||||  |    
39944 catgcagcttaattaaataacaatagcaacataggcagtatacaaaa-caacatgacataataatatcaaatgcatgtcaataacatcttaaatatttga 40042  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
     |||  ||||||||||| | | |||||||||||||| |||||||| || ||||||||| |||| ||||||||| |||||||||||| || ||||||||||    
40043 ttatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcataaagagcttcacagattataattaacatcatcattaagtc 40142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 10513 - 10312
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||| ||||||| ||||||  ||||||||||| |||||||||   ||||||||| |||||||||||||| ||||||| ||||||||||| ||| ||    
10513 catgcagcatagttaattaacaaacagcaacataggcagtatacaa---cagcatgacataataatatcaatttcaattcaacaacatcttaagtataca 10417  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    |||||| ||||||||||| || || |||||||||||| |||||||| |||| ||| |||||| ||||||||||| ||||||||||||||  | |||||||    
10416 aatattcttcaagtaatgcat-aatcattatatcacatcataatcatcaacgacatatcttatacagcttcacagattataattaaccttattattaagt 10318  T
200 cttaat 205  Q
    ||||||    
10317 cttaat 10312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3276 - 3104
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||||| || |||||| |||||||| || ||| ||     
3276 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctcaagtatacat 3177  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcaca 173  Q
      || ||||||||||||  |  |||||||||||||| |||||||| || ||||||||||||||||||||||||    
3176 tcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 3104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 17307 - 17105
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaa--cagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattc 98  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||  ||||||||| |||||||||||| ||||| ||| |||||||| || ||| |    
17307 catgcagcttagttaaataacaacagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatac 17208  T
99 aaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaag 198  Q
    |   || ||||||||||||  |  |||||||||||||| |||||||| || |||||| ||||||||||||| ||| |||||||||||| || | ||||||    
17207 attcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacgtcttaaacagctttacagattataattaacatcatgattaag 17108  T
199 tct 201  Q
    |||    
17107 tct 17105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 79418 - 79278
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| |||||||  |  |||||| |||||||||||||| ||||||| |||| ||||| ||| |||| ||| || ||||||     
79418 catgcagcttagttaaataacaacagcaacac-gacagtatataaaaacagcatgacataataatttcaaatgcaagtcaacaacgtctcaattattcac 79320  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  | |||||||||| ||||    
79319 atataattcaagtaatgcatatacaagtatatcacaatataa 79278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 16690 - 16490
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| | | ||||||| ||||||||||||| |||||||||||| || || ||| || ||||| || ||| ||     
16690 catgcagcttagttaaataacaacagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaacagcatctcaagtatacat 16591  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||  || |||||||||||||| || ||||| || |||||||||||||||||||||||| | |||||||||| || ||||||||||    
16590 tcataattcaagtaatgcgtataacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacagactataattaacatcatcattaagtc 16491  T
201 t 201  Q
    |    
16490 t 16490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 340037 - 339840
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||| || |||||| |||||||||||| | ||| ||| |||||||| || ||| ||     
340037 catgcagcttagttaaataacacaa-caacataggcagtatacaaaa-caacatgacataataatatcaaat-caagtcaacaacatctcaagtatacat 339941  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtc 200  Q
      || ||||||||||||  || |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||||||    
339940 tcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacgtcatcattaagtc 339841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 158584 - 158444
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
158584 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 158486  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
158485 atataattcaagtaatgcatatacaattatatcacaatataa 158444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 71350 - 71474
Alignment:
19 aacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatga 118  Q
    ||||| ||||||||||| || |||||||  ||||||||| ||||| |||||||| ||||||| ||||||||| | |||||||||| |  | | ||||||     
71350 aacaacagcaacataggcagcatacaaa--cagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattcttaggtaatgc 71447  T
119 ataaaacattatatcacaacataatca 145  Q
    ||||||||||||||||||  |||||||    
71448 ataaaacattatatcacattataatca 71474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 16313 - 16514
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||| ||  ||||||||||| |||||||||   ||||||||| |||| ||||||| | |||||||||||||| |||  ||| ||    
16313 catgcagcttagttaaataagaaacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatattatgtataca 16409  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    || ||| ||||||||||| ||||| ||||||| |||| |||||||| |||||||| ||||||  |||||||||| |||||| |||||||| | |||||||    
16410 aacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattattaagt 16508  T
200 cttaat 205  Q
    ||||||    
16509 cttaat 16514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 1037 - 1149
Alignment:
93 atattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttc 192  Q
    ||||||||||| |  |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||    
1037 atattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagattataattagcctcttc 1136  T
193 attaagtcttaat 205  Q
    |||||||||||||    
1137 attaagtcttaat 1149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28445 - 28546
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||| |||||||||||||||||||||| |||||||||| ||||||||    
28445 catgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattcaa 28544  T
101 at 102  Q
    ||    
28545 at 28546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 1139 - 954
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||| ||| ||  | ||||||||| |||||||||   || |||||| |||| ||||||||| ||||||||||||||||||  ||| ||    
1139 catgcagcttagttaattaataaacatcaacataggcagtatacaa---catcatgacataattatatcaatttcaattcatcaacatcttatgtataca 1043  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctc 189  Q
    |||||| ||||||||||| || |||||||||| |||| |||||||| |||||||| || ||| ||||||||||| |||||| ||||||||    
1042 aatattcttcaagtaatgcat-aaacattataacacatcataatcaacaacaacatattttatacagcttcacagattatagttaacctc 954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 47026 - 47202
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||| ||||||||||||||||||  | ||||||||| ||| ||||    ||||||||| |||||||||||||| ||||||||||||||||||  ||| ||    
47026 catgtagcttagttaaataacaaacaacaacataggcagtttacag---cagcatgacataataatatcaatttcaattcatcaacatcttatgtataca 47122  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattata 180  Q
    |||||| | ||||||||| || ||||||||||||||| ||||| || |||||||| |||||| ||||||||||| ||||||    
47123 aatattctccaagtaatgcat-aaacattatatcacatcataaacatcaacaacatatcttatacagcttcacagattata 47202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 196
Target Start/End: Complemental strand, 3584 - 3424
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    ||||||||||||||||||||| |||||||||||| ||||| ||| |||||||| || ||| ||   || ||||||||||||  || ||||||||||||||    
3584 agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcaca 3485  T
137 acataatcagcaacaacacatctt-aaacagcttcacatattataattaacctcttcatta 196  Q
     |||||||| || ||||||||||| ||||||||||| | |||||||||||| || ||||||    
3484 tcataatcaacatcaacacatcttaaaacagcttcatagattataattaacatcatcatta 3424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 33046 - 32904
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||| |||||| ||||||| ||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| |    
33046 catgcagcttagttaattaacaacagcaacacaggcagtatacaaaa-cagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-a 32949  T
101 atattattcaagtaatgaataaaacattatatcacaacataatca 145  Q
     |||  ||| ||||||| ||| ||||||||| |||| ||| ||||    
32948 ttatacttcgagtaatgcatataacattataacacatcatgatca 32904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 45959 - 46101
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||| |||||| ||||||| ||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| |    
45959 catgcagcttagttaattaacaacagcaacacaggcagtatacaaaa-cagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-a 46056  T
101 atattattcaagtaatgaataaaacattatatcacaacataatca 145  Q
     |||  ||| ||||||| ||| ||||||||| |||| ||| ||||    
46057 ttatacttcgagtaatgcatataacattataacacatcatgatca 46101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 16144 - 16323
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||  | |||||||||| |||||  || || ||||| || ||| ||     
16144 catgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcaagatatcataatatcaaatgcaagccaacatcatctcaagtatacat 16243  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctt-aaacagcttcacatattataa 181  Q
      || | |||||||||| ||| |||||||||||||  ||| |||| || ||  ||||||| ||||||||||||| |||||||    
16244 tcataactcaagtaatgcatataacattatatcacgtcatgatcaacatca--acatcttaaaacagcttcacagattataa 16323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 68; Significance: 1e-30; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 1320 - 1521
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  ||||||||||| ||| |||||   || |||||| |||| ||||||| | ||||||||||||||||||  ||| ||    
1320 catgcagcttagttaaataacaaacagcaacataggcagtgtacaa---catcatgacataattatatcaaattcaattcatcaacatcttatgtataca 1416  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    || ||| ||||||||||| || |||||||||| |||  |||||||| |||||||| ||||||  |||||||| | |||||| |||||||| |  ||||||    
1417 aacattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcatagattatagttaacctcattcttaagt 1515  T
200 cttaat 205  Q
    ||||||    
1516 cttaat 1521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 7297 - 7498
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||| ||||   |||  |||| ||||||| | ||||||||||||||||||  ||| ||    
7297 catgcagcttagttaaataacaaacaacaacataggcagtatacaacaaca---tgaaataattatatcaaattcaattcatcaacatcttatgtataca 7393  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    || ||| ||||||||||| ||||| ||||||| |||  |||||||| |||||||| ||||||  |||||||| | |||||| |||||||| |  ||||||    
7394 aacattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcatagattatagttaacctcattcttaagt 7492  T
200 cttaat 205  Q
    ||||||    
7493 cttaat 7498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 15328 - 15294
Alignment:
1 catgcagcttagttaaataacaatagcaacatagg 35  Q
    |||||||||||||||||||||||||||||||||||    
15328 catgcagcttagttaaataacaatagcaacatagg 15294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 68; Significance: 1e-30; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 17574 - 17440
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
17574 catgcagcttagttaaataacaatagcaacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 17476  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
17475 atataattcaagtaatgcatatataattatatcaca 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 94439 - 94579
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
94439 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 94537  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
94538 atataattcaagtaatgcatatacaattatatcacaatataa 94579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44482 - 44598
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaa-acagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||| |||||||||| |||||||||||| ||||| ||| |||||||| || ||||||    
44482 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattattca 44580  T
100 aatattattcaagtaatg 117  Q
     |||| ||||||||||||    
44581 catataattcaagtaatg 44598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 100405 - 100501
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatatt 97  Q
    ||||||||||||||||||||| || ||||||||||| ||||| | ||| || |||||  |||||||||| | ||||| ||| |||||||| |||||||    
100405 catgcagcttagttaaataacaaacagcaacataggcagtatgc-aaatcatcatgatataataatatcgaatgcaaatcaacaacatctcaaatatt 100501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38569 - 38478
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaa 92  Q
    |||||| ||||||||||||||||||||| |||||  ||   |||| |||| |||||| |  ||||||||||| || |||| |||||||||||    
38569 catgcaacttagttaaataacaatagcagcatagacagatcacaacaacaacatgacttcttaatatcaatttcatttcaacaacatcttaa 38478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 51 - 201
Target Start/End: Original strand, 27911 - 28061
Alignment:
51 gcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataatcagcaac 150  Q
    ||||||| |||||||||||| ||||| ||| |||||||| |||||| ||   || |||||||||||| ||| |||||||||||||| |||||||| || |    
27911 gcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatc 28010  T
151 aacacatcttaaacagcttcacatattataattaacctcttcattaagtct 201  Q
    |||| |||||||||| |||||||  ||||||||||| || |||||||||||    
28011 aacaaatcttaaacaacttcacaggttataattaacatcatcattaagtct 28061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 5218 - 5017
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  | ||||||||| | |||||||   || |||||| |||| ||||||| | ||||||||||||||||||  ||| ||    
5218 catgcagcttagttaaataacaaacatcaacataggtattatacaa---catcatgacataattatatcaaattcaattcatcaacatcttatgtataca 5122  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagt 199  Q
    || ||| ||||||||||| || |||||||||| |||| | |||||| |||||||| || |||  ||| |||||||||||||||||||||  | ||||| |    
5121 aacattcttcaagtaatgtat-aaacattataacacatcttaatcaacaacaacatattttattcagtttcacatattataattaaccttattattaaat 5023  T
200 cttaat 205  Q
    ||||||    
5022 cttaat 5017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11533 - 11442
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaa 92  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||| ||||    
11533 catgcagcttagttaaataacaacaacaacataggtagtatacaaaaacaacatgacataataatatcaatttcaattcatcaacatgttaa 11442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 11450 - 11399
Alignment:
154 acatcttaaacagcttcacatattataattaacctcttcattaagtcttaat 205  Q
    |||| |||| |||||||||| ||||||||||||||| |||||||||||||||    
11450 acatgttaatcagcttcacagattataattaacctcatcattaagtcttaat 11399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 4555 - 4754
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||||||||| | || |||||| ||||| ||| | ||||| ||  | |||||||||| |  |||||| ||||||||||||||||||     
4555 catgcaacttagttaaataacaacaacagcataggcagtatgcaacagcagcaagatatcataatatcaaatataattcaacaacatcttaaatattcat 4654  T
101 atattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctt-aaacagcttcacatattataattaacctcttcattaagt 199  Q
     |||  ||||||||||| |||| ||||||||||||| ||| |||| || ||  ||||||| ||||||| ||||| |||||||||||| |||||| |||||    
4655 ttatacttcaagtaatgcataatacattatatcacatcatgatcaacatca--acatcttaaaacagcctcacaaattataattaacatcttcaataagt 4752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 4325 - 4465
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||||||||||||| ||| |||| ||| || || |||     
4325 catgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacaacatgacataataatatcaattgcaaatcaacaacgtctcaattaatcac 4423  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
4424 atataattcaagtaatgcatatataattatatcacaatataa 4465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 4722 - 4862
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
4722 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 4820  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
4821 atataattcaagtaatgcatatataattatatcacaatataa 4862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 20775 - 20915
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
20775 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 20873  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
20874 atataattcaagtaatgcatatacaattatatcacaatataa 20915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 37849 - 37989
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
37849 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 37947  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
37948 atataattcaagtaatgcatatacaattatatcacaatataa 37989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 82100 - 82240
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||| |||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
82100 catgaagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 82198  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
82199 atataattcaagtaatgcatatataattatatcacaatataa 82240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 11316 - 11456
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||| |||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
11316 catgcaacttagttaaataacaacagcaacacagc-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 11414  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
11415 atatgattcaagtaatgcatatataattatatcacaatataa 11456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 61; Significance: 2e-26; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 3640 - 3716
Alignment:
129 atatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaat 205  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
3640 atatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaat 3716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 7704 - 7780
Alignment:
129 atatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaat 205  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
7704 atatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaat 7780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 27839 - 27666
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||  |||||  | ||||||||| ||||| ||||| ||||||||  ||| |||||||| || || ||| |||||||| ||| |||||    
27839 catgcagcttagttaataaacaaacaacaacataggtagtatgcaaaa-cagcatgatataacaatatcaaatgtaaatcaacaacatctcaaacattca 27741  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctta-aacagcttcaca 173  Q
     |||| |||| ||||||| ||| |  |||||||||||  |||| || || |||  ||||||| ||||||||||||    
27740 catataattctagtaatgcatatacaattatatcacattataaccaacatcaaatcatcttataacagcttcaca 27666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 51613 - 51798
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||   || |||||| |||| ||| ||| | ||||||||||||||||||  ||| ||    
51613 catgcagcttagttaaataacaaacagcaacataggcagtatacaa---catcatgacataattataacaaattcaattcatcaacatcttatgtataca 51709  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctc 189  Q
    |||||  |||||| |||| || |||||||||| |||  |||| ||| |||||||| ||||||  |||||||||| |||||| ||||||||    
51710 aatatccttcaagaaatgcat-aaacattataacacttcatattcaacaacaacatatcttattcagcttcacagattatagttaacctc 51798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 10801 - 10941
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
10801 catgcagcttagttaaataacaacagcaacacagc-agtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 10899  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| ||| |||||||| ||| |  |||||||||||| ||||    
10900 atataatttaagtaatgcatatataattatatcacaatataa 10941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13975 - 14115
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||| |||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
13975 catgcagcttagataaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 14073  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
14074 atataattcaagtaatgcatatacaattatatcacaatataa 14115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 16812 - 16952
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || |||| |     
16812 catgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattatttac 16910  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
16911 atataattcaagtaatgcatatacaattatatcacaatataa 16952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 1e-24; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 501112 - 501252
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| ||  | |||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
501112 catgcagcttagttaaataacaacagcaacacagcaa-tatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 501210  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
501211 atataattcaagtaatgcatatataattatatcacaatataa 501252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 85714 - 85573
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||||||||||||| |||||||||||| ||||| || |||||| ||| || ||||||    
85714 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctgaattattca 85616  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     | || |||||| ||||| ||| |  |||||||||||| ||||    
85615 caaataattcaattaatgcatatacaattatatcacaatataa 85573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 160715 - 160761
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaa 46  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||    
160715 catgcagcttagttaaataacaatcagcaacataggcagtatgcaaa 160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 135 - 274
Alignment:
2 atgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaa 101  Q
    |||||||||||||||||||||| ||||||| |   |||||||||||||| |||||| |||||||||||| ||||| ||| |||| ||| || |||||| |    
135 atgcagcttagttaaataacaacagcaacacaat-agtatacaaaaacaacatgacataataatatcaaatgcaaatcaacaacgtctcaattattcaca 233  T
102 tattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    ||| |||||||||||| ||| |  |||||||||||| ||||    
234 tataattcaagtaatgcatatataattatatcacaatataa 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13420 - 13535
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
13420 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 13518  T
101 atattattcaagtaatg 117  Q
    |||| ||||||||||||    
13519 atataattcaagtaatg 13535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 145
Target Start/End: Complemental strand, 15461 - 15362
Alignment:
46 aaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataatca 145  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||| |  | |||||||| ||||||||||||||||||  |||||||    
15461 aaacagcatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattcttaagtaatgcataaaacattatatcacattataatca 15362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 56; Significance: 2e-23; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 134239 - 134373
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||| |||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
134239 catgcagcttagttaaataacaacagcaacacaac-agtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 134337  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
134338 atataattcaagtaatgcatatacaattatatcaca 134373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 136708 - 136842
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||| |||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
136708 catgcagcttagttaaataacaacagcaacacaac-agtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 136806  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
136807 atataattcaagtaatgcatatacaattatatcaca 136842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 139177 - 139311
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||| |||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
139177 catgcagcttagttaaataacaacagcaacacaac-agtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 139275  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
139276 atataattcaagtaatgcatatacaattatatcaca 139311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 144115 - 144249
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||||||| |||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
144115 catgcagcttagttaaataacaacagcaacacaac-agtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 144213  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
144214 atataattcaagtaatgcatatacaattatatcaca 144249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 141646 - 141780
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||| |||||||||||||||||| ||||||| |   |||||||||| |||||||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
141646 catgtagcttagttaaataacaacagcaacacaac-agtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 141744  T
101 atattattcaagtaatgaataaaacattatatcaca 136  Q
    |||| |||||||||||| ||| |  |||||||||||    
141745 atataattcaagtaatgcatatacaattatatcaca 141780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 1006 - 873
Alignment:
47 aacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcacaacataatcag 146  Q
    ||||||||| | ||||||||||||| |||| ||| ||| |||| ||||||||||  || |||||||||||| | | |||||||||||||| | |||||      
1006 aacagcatggcataataatatcaat-gcaagtcaacaaaatctcaaatattcaatcataattcaagtaatgcacataacattatatcacatcgtaatcga 908  T
147 caacaacacatcttaaacagcttcacatattataa 181  Q
    || ||||||||||||||||||||||||||| ||||    
907 catcaacacatcttaaacagcttcacatatcataa 873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8497 - 8613
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||||||||||  | ||||||||| ||||| ||||| ||||||||  ||| |||||||| ||||| |||||||||||| |||||||||    
8497 catgcagcttagttaaataacaaacaacaacataggcagtatgcaaaa-cagcatgatataacaatatcaaatgcaagtcatcaacatctcaaatattca 8595  T
100 aatattattcaagtaatg 117  Q
     |||| ||||||||||||    
8596 tatataattcaagtaatg 8613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6566 - 6661
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatat 96  Q
    ||||||||||||||||||||| || ||||||||||| ||||| | ||| || |||||  ||| |||||| | ||||| ||| |||||||| ||||||    
6566 catgcagcttagttaaataacaaacagcaacataggcagtatgc-aaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 6661  T

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Target: scaffold0494 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 12382 - 12243
Alignment:
2 atgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaa 101  Q
    |||||||||||||||||||||| ||||||| ||  || ||||||||||||||||||  ||||||||||| ||||| ||| |||| ||| || |||||| |    
12382 atgcagcttagttaaataacaacagcaacacagc-agaatacaaaaacagcatgacaaaataatatcaaatgcaagtcaacaacgtctcaattattcaca 12284  T
102 tattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    | | |||||||||||| ||| |  |||||||||||| ||||    
12283 tttaattcaagtaatgcatatataattatatcacaatataa 12243  T

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Target: scaffold0031 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 128824 - 128916
Alignment:
44 aaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    |||||||||||||| |||||||||||| ||||| ||| ||||||||||||||||||| |||  ||||||||||| | | ||||||||||||||    
128824 aaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgtacataacattatatcaca 128916  T

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Target: scaffold0031; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20512 - 20373
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||| || |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
20512 catgcagcttagttaaataacaacagcaacacatc-agtatacaaaa-caacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 20415  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||||||||| ||| |  |||||||||||| ||||    
20414 atataattcaagtaatgcatatacaattatatcacaatataa 20373  T

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Target: scaffold0363 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9270 - 9410
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   |||||| ||||||| |||||| |||||||||||| ||||| ||| |||| ||| || ||||||     
9270 catgcagcttagttaaataacaacagcaacacaac-agtatataaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 9368  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| ||| |||||||| ||| |  |||||||||||| ||||    
9369 atataatttaagtaatgcatatataattatatcacaatataa 9410  T

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Target: scaffold0149 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 29960 - 30100
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||||||| |   ||||||||||||||||||||| |||||||||||| || || ||| |||| ||| || ||||||     
29960 catgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacagcatgacataataatatcaagtgtaagtcaacaacgtctcaattattcac 30058  T
101 atattattcaagtaatgaataaaacattatatcacaacataa 142  Q
    |||| |||||| ||||  ||| |  |||||||||||| ||||    
30059 atataattcaaataattcatatacaattatatcacaatataa 30100  T

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Target: scaffold0044 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 40430 - 40562
Alignment:
3 tgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaat 102  Q
    ||||||||||||||||||||| ||||||| |   ||||||||||||||| ||||| |||||||||||| ||||| ||| |||| ||| || |||||| ||    
40430 tgcagcttagttaaataacaacagcaacacaac-agtatacaaaaacaggatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacat 40528  T
103 attattcaagtaatgaataaaacattatatcaca 136  Q
    |  |||||||||||| ||| |  |||||||||||    
40529 aaaattcaagtaatgcatatacaattatatcaca 40562  T

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Target: scaffold0075 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 53639 - 53504
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||  |||||  ||||||||||| ||||| ||||| || |||||  ||| |||||||| ||||| |||||||||||| |||||||||    
53639 catgcagcttagttaataaacaaacagcaacataggcagtatgcaaaa-caacatgatataacaatatcaaatgcaagtcatcaacatctcaaatattca 53541  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
53540 tatataattcaagtaatgtatatacaattatatcaca 53504  T

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Target: scaffold0507 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 8151 - 8014
Alignment:
1 catgcagcttagttaaataacaa-tagcaacatagggagtatacaaaaacagc--atgacgtaataatatcaattgcaattcatcaacatcttaaatatt 97  Q
    ||||||||||| ||||||||||| ||||| |||||| ||||| ||||  ||||  ||||  |||||||||||| || |||||| |||||||||||| |||    
8151 catgcagcttaattaaataacaaatagcagcataggcagtatgcaaat-cagctcatgatataataatatcaaatgaaattcaacaacatcttaaacatt 8053  T
98 caaatattattcaagtaatgaataaaacattatatcaca 136  Q
    || |||| |||||||||||| ||| || |||||||||||    
8052 catatataattcaagtaatgtatataaaattatatcaca 8014  T

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Target: scaffold0394 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 12121 - 12226
Alignment:
37 agtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    ||||||| ||||||||||||| |||||||||||| ||||| ||| |||| ||| || |||||| |||| |||||||||||| ||| |  |||||||||||    
12121 agtatactaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcaca 12220  T
137 acataa 142  Q
    | ||||    
12221 atataa 12226  T

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Target: scaffold0352 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 17928 - 17873
Alignment:
150 caacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaat 205  Q
    |||||||||||||||||||||||| |||||||||||| || |||||||||||||||    
17928 caacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaat 17873  T

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Target: scaffold0215 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 26855 - 26996
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacag-catgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||||| ||||  |||||  |||| ||||||||| ||||||||||||||||||  ||| ||    
26855 catgcatcttggttaaataacaatagcagcataggcagattacaacaacaatcatga--taattatatcaatt-caattcatcaacatcttatgtataca 26951  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatca 145  Q
    |||||| ||||||||||| || ||||||||||  ||| ||||||||    
26952 aatattcttcaagtaatgcat-aaacattataatacatcataatca 26996  T

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Target: scaffold0101 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1415 - 1274
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    |||||||||| |||||||||||| |  |||| |  |||||||||||||||||||||| |||||||||||| ||||| || |||| | ||| || ||||||    
1415 catgcagcttggttaaataacaacaataacaca-tgagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcatcgtctcaattattca 1317  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     |||| |||||| ||||| ||| |  |||||||||||| ||||    
1316 catataattcaattaatgcatatacaattatatcacaatataa 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 161224 - 161083
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    ||||||||||||||||||| ||| ||| ||| ||  ||||||||||||||  ||||| |||||||||||| ||||| || |||||||||| || ||||||    
161224 catgcagcttagttaaatatcaacagcgacacagc-agtatacaaaaacataatgacataataatatcaaatgcaagtcaatcaacatctcaattattca 161126  T
100 aatattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     | || |||||| ||||| ||| |  |||||||||||| ||||    
161125 caaataattcaattaatgcatatacaattatatcacaatataa 161083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 4242 - 4378
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattca 99  Q
    |||||| |||||||||||||| | ||| ||| ||  ||||||||||| ||||||||| |||||||||||| ||||| || |||||| ||| || ||||||    
4242 catgcaacttagttaaataacgacagcgacacagc-agtatacaaaaccagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 4340  T
100 aatattattcaagtaatgaataaaacattatatcacaa 137  Q
     |||| |||||| ||||| ||| |  ||||||||||||    
4341 catataattcaattaatgcatatacaattatatcacaa 4378  T

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Target: scaffold0019 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29121 - 29198
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaatt 78  Q
    |||||| ||||||||||||||||||| | |||||| ||  ||||| || |||||||| ||||||||||||||||||||    
29121 catgcatcttagttaaataacaatagtagcataggtagattacaacaatagcatgacataataatatcaattgcaatt 29198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 29592 - 29720
Alignment:
8 cttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaa-ttcatcaacatcttaaatattcaaatatta 106  Q
    ||||||||||||||||||| | |||||| ||  ||||| || |||||||| |||||||||||||||||| |||| ||| |  ||||||||||||  |       
29592 cttagttaaataacaatagtagcataggtagattacaataatagcatgacataataatatcaattgcaatttcaacaagactttaaatattcaataaaac 29691  T
107 ttcaagtaatgaataaaacattatatcac 135  Q
    ||||||||||| | | |||||||||||||    
29692 ttcaagtaatgcacacaacattatatcac 29720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 10323 - 10394
Alignment:
130 tatcacaacataatcagcaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtct 201  Q
    ||||||| |||||||| || |||||||||||||||||||||||| ||||| |||||| || | |||||||||    
10323 tatcacatcataatcaacatcaacacatcttaaacagcttcacagattattattaacatcattattaagtct 10394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 1063 - 1158
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatat 96  Q
    ||||||||||||||||||||| || ||||||||||| ||||| | ||||||||||||  ||| |||||||| | | | |||||||||||| ||||||    
1063 catgcagcttagttaaataacaaacagcaacataggcagtatgc-aaaacagcatgatataacaatatcaaatacgaatcatcaacatctcaaatat 1158  T

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Target: scaffold0247 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 2261 - 2122
Alignment:
3 tgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattc-atcaacatcttaaatattcaaa 101  Q
    ||||||||||||||||||||| ||| ||| |   |||||||||||||| |||||| |||||||||||| ||||| || || ||| ||| || |||||| |    
2261 tgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacaacatgacataataatatcaaatgcaagtcaattaacgtctcaattattcaca 2163  T
102 tattattcaagtaatgaataaaacattatatcacaacataa 142  Q
     || |||||| ||||| ||| |  |||||||||||| ||||    
2162 aataattcaattaatgcatatacaattatatcacaatataa 2122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 13159 - 13333
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaa-tattc 98  Q
    ||||||||||||||||  |||||  | ||||||||| ||||| ||||| ||||||||  ||| |||||||| ||||| ||| |||||||| |||  ||||    
13159 catgcagcttagttaataaacaaacaacaacataggcagtatgcaaaa-cagcatgatataacaatatcaaatgcaaatcaacaacatctgaaaccattc 13257  T
99 aaatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctta-aacagcttcaca 173  Q
    | |||| |||||||||||| ||| |  |||||||||||  |||| || || |||  ||||||| ||||||||||||    
13258 atatataattcaagtaatgcatatacaattatatcacattataaccaacatcaaatcatcttataacagcttcaca 13333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 16190 - 16017
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    ||||||||||||||||  |||||  | ||||||||| ||||| ||||| || |||||  ||| |||||||| || || ||| |||||||| ||| ||||     
16190 catgcagcttagttaataaacaaacaacaacataggtagtatgcaaaa-caacatgatataacaatatcaaatgtaaatcaacaacatctcaaacattct 16092  T
100 aatattattcaagtaatgaataaaacattatatcacaacataatcagcaacaacacatctta-aacagcttcaca 173  Q
     |||| |||||||||||| ||| |  |||||||||||  |||| || || |||  ||||||| ||||||||||||    
16091 tatataattcaagtaatgcatatacaattatatcacattataaccaacatcaaatcatcttataacagcttcaca 16017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4894 - 4803
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaa 92  Q
    |||||| ||||||||||||| ||||||| |||||| ||   |||| |||||| |||| | |||||||||||| || |||| |||||||||||    
4894 catgcaacttagttaaataataatagcagcataggcagatcacaacaacagcttgacttcataatatcaatttcatttcaacaacatcttaa 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 116458 - 116571
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    ||||||||||||||||||||||| ||| ||| |   ||||||||||| ||||||||| |||| ||||||| ||||| ||| |||||||| |||||| ||     
116458 catgcagcttagttaaataacaacagcgacacaac-agtatacaaaa-cagcatgacataatcatatcaaatgcaagtcaacaacatctcaaatatacat 116555  T
101 atattattcaagtaat 116  Q
      || |||||||||||    
116556 tcataattcaagtaat 116571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38792 - 38679
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||| |||||||||||||| || ||||||||||  ||||| | |||||| |||||  ||| |||||||| ||||| ||||||| |||| ||||||| |    
38792 catgcaccttagttaaataacaaacagcaacatagacagtatgc-aaaacaacatgatataacaatatcaaatgcaagtcatcaatatctcaaatattta 38694  T
100 aatattattcaagta 114  Q
     |||| |||||||||    
38693 tatataattcaagta 38679  T

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Target: scaffold0555 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 10630 - 10516
Alignment:
2 atgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaa 100  Q
    |||||||||||||||||||| || ||||||||||| ||||| | ||| || |||||  ||| |||||| | ||||| |||||||||||| ||||| ||||    
10630 atgcagcttagttaaataacaaacagcaacataggcagtatgc-aaatcatcatgatataacaatatcgaatgcaagtcatcaacatctcaaata-tcaa 10533  T
101 atattattcaagtaatg 117  Q
    | || ||||| ||||||    
10532 acataattcatgtaatg 10516  T

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Target: scaffold0461 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 11495 - 11630
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||| ||||||| ||||||||||| ||||| | |||||| |||||  ||||||||||    | || | | |||||||| ||||| |||    
11495 catgcagcttagttaattaacaatcagcaacataggcagtatgc-aaaacatcatgatataataatatcgcacgtaagtaaacaacatctcaaataatca 11593  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
11594 catataattcaagtaatgcatatacaattatatcaca 11630  T

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Target: scaffold0413 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 12599 - 12733
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||| |||||||||||  |||||  ||||||||||| ||||| ||||| ||||||||  ||| |||||||| ||||| |||||||||||| ||||| | |    
12599 catgtagcttagttaataaacaaacagcaacataggcagtatgcaaaa-cagcatgatataacaatatcaaatgcaagtcatcaacatctcaaatactta 12697  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||| ||||||| ||| |  |||||||||||    
12698 tatataattc-agtaatgtatatacaattatatcaca 12733  T

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Target: scaffold0124 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 38346 - 38211
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||||||||||||| ||||||| ||||||||||| ||||| | |||||| |||||  ||||||||||    | || | | |||||||| ||||| |||    
38346 catgcagcttagttaattaacaatcagcaacataggcagtatgc-aaaacatcatgatataataatatcgcacgtaagtaaacaacatctcaaataatca 38248  T
100 aatattattcaagtaatgaataaaacattatatcaca 136  Q
     |||| |||||||||||| ||| |  |||||||||||    
38247 catataattcaagtaatgcatatacaattatatcaca 38211  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 225482 - 225572
Alignment:
45 aaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgaataaaacattatatcaca 136  Q
    |||||||| |||  |||||||||||| |||||| || |||||||| ||| ||||| |||| |||||||||||| ||| |  |||||||||||    
225482 aaaacagcgtgatataataatatcaaatgcaat-caacaacatctcaaacattcatatataattcaagtaatgcatatacaattatatcaca 225572  T

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Target: scaffold0096 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 16438 - 16299
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtat-acaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||| ||||||||||||||||||||| |||||| | ||| |||| |||| |||||| | ||||||||||||  | |||| |||||||||||  ||||     
16438 catgcaacttagttaaataacaatagcagcataggca-tatcacaacaacatcatgacttcataatatcaatt-aatttcaacaacatcttaatcattc- 16342  T
100 aatattat-tcaagtaatgaataaaacattatatcacaacata 141  Q
    |||| ||| | |||||||| | | |||||||||||||| ||||    
16341 aataatatcttaagtaatgcacataacattatatcacatcata 16299  T

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Target: scaffold0305 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 20595 - 20640
Alignment:
162 aacagcttcacatattataattaacctcttcattaagtcttaatgc 207  Q
    |||||||||||| |||||| ||||| || |||||||||||||||||    
20595 aacagcttcacagattatagttaacatcatcattaagtcttaatgc 20640  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 129936 - 130051
Alignment:
1 catgcagcttagttaaataaca-atagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatattca 99  Q
    |||||| ||||||||||||||| | ||||||||||| ||||| | ||| || |||||  ||| |||||| | ||||| |||||||||||| ||||| |||    
129936 catgcatcttagttaaataacacacagcaacataggcagtatgc-aaatcatcatgatataacaatatcgaatgcaagtcatcaacatctcaaata-tca 130033  T
100 aatattattcaagtaatg 117  Q
    || || ||||| ||||||    
130034 aacataattcatgtaatg 130051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 60806 - 60689
Alignment:
1 catgcagcttagttaaataacaat-agcaacatagggagtatacaaaaacagc--atgacgtaataatatcaattgcaattcatcaacatcttaaatatt 97  Q
    ||||||||||||||||  |||||  ||||||||||| ||||||||||| ||||  ||||  ||  ||||||||| |||| ||| |||||||| ||| |||    
60806 catgcagcttagttaataaacaaacagcaacataggcagtatacaaaa-cagctcatgatataccaatatcaat-gcaaatcaacaacatctcaaacatt 60709  T
98 caaatattattcaagtaatg 117  Q
    || |||| ||||||||||||    
60708 catatataattcaagtaatg 60689  T

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Target: scaffold0628 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2896 - 2801
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatat 96  Q
    ||||||||||||||||||||| || ||| ||||||| ||||| | ||| || |||||  ||| |||||||| ||||| ||| |||||||| ||||||    
2896 catgcagcttagttaaataacaaacagctacataggcagtatgc-aaatcatcatgatataacaatatcaaatgcaaatcaacaacatctcaaatat 2801  T

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Target: scaffold0261 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 15694 - 15738
Alignment:
3 tgcagcttagttaaataac-aatagcaacatagggagtatacaaa 46  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
15694 tgcagcttagttaaataacaaacagcaacataggcagtatacaaa 15738  T

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Target: scaffold0198 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23870 - 23926
Alignment:
1 catgcagcttagttaaataacaatagcaacatagggagtatacaaaaacagcatgac 57  Q
    |||||||||| ||||||||||||||||| |||||| ||  ||||| ||||| |||||    
23870 catgcagcttggttaaataacaatagcaccataggcagattacaacaacagtatgac 23926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19295 - 19390
Alignment:
1 catgcagcttagttaaataac-aatagcaacatagggagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttaaatat 96  Q
    ||||||||||||||||||||| || ||||||||||| ||||| | ||| || |||||  ||| |||||| | ||||| ||| |||||||| ||||||    
19295 catgcagcttagttaaataacaaacagcaacataggcagtatgc-aaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 19390  T

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