View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19499_low_19 (Length: 278)
Name: NF19499_low_19
Description: NF19499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19499_low_19 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 25 - 278
Target Start/End: Original strand, 51964174 - 51964427
Alignment:
| Q |
25 |
tacagtatcacgtgaaatcctccacaaccccaagtcttttatgaagaagaatattatcagtttatcataagcacagattcacatatcaatatatcagata |
124 |
Q |
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| T |
51964174 |
tacagtatcacgtgaaatcctccacaaccccaagtcttttatgaagaagaatattatcagtttatcataagcacagattcacatatcaatgtatcagata |
51964273 |
T |
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| Q |
125 |
atgattatgcataattcatgtaatgcccgtttacttggatgaaatgagaagaatcaacagagtttttataatctttctgatttcatttcaaaataaaaag |
224 |
Q |
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| T |
51964274 |
atgattatgcataattcatgtaatgcccgtttacttggatgaaatgagaagaatcaacatagtttttataatctttctgatttcatttcaaaataaaaag |
51964373 |
T |
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| Q |
225 |
tgaaaaactaatctcagatttcctcttcaaatgatagacaaaggctaagtgaca |
278 |
Q |
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| T |
51964374 |
tgaaaaactaatctcagatttcctcttcaaataatagactaaggctaagtgaca |
51964427 |
T |
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