View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19500_high_6 (Length: 219)
Name: NF19500_high_6
Description: NF19500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19500_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 10369812 - 10369609
Alignment:
| Q |
1 |
agaatatacctacaatccaaattttaaaattaatacaccactttcaagaaaaggaatctaatatgggctacttcgtagaagacaacaagcacaacctcca |
100 |
Q |
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| T |
10369812 |
agaatatacctacaatccaaattttaaaattaatacaccactttcaagaaaaggaatctaatatgggctacttcgtagaagacaacaagcacaacctcca |
10369713 |
T |
|
| Q |
101 |
tcgattggaattttctaagcttaatttaatatacacatataaaacaggaaacaagacaaataataataaaatatgaattgcaaaacataagacaaaagta |
200 |
Q |
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| T |
10369712 |
tcgattggaattttctaagcttaatttaatatacacatataaaacaggaaataagacaaataataataaaatatgaattgcaaaacataagacaaaaata |
10369613 |
T |
|
| Q |
201 |
attg |
204 |
Q |
| |
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|||| |
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| T |
10369612 |
attg |
10369609 |
T |
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