View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19502_low_3 (Length: 244)
Name: NF19502_low_3
Description: NF19502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19502_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 2694011 - 2693881
Alignment:
| Q |
14 |
aaaatcaccgtaggtcaaaaggaggagtttattttttaaactctgcgactgtgtgagagttatttctttttggtggtcggaagctcaaaaactaggtttt |
113 |
Q |
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| T |
2694011 |
aaaatcaccgtaggtcaaaaggaggagtttattttttaaactctgcgaccgtgtgagagttatttctttttggtggtcggaagctcaaaaactaggtttt |
2693912 |
T |
|
| Q |
114 |
gattttgatattcatcaatggtgggttaagc |
144 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
2693911 |
gattttgatattcatcaatggtgggttaagc |
2693881 |
T |
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