View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19503_high_10 (Length: 258)
Name: NF19503_high_10
Description: NF19503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19503_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 76 - 242
Target Start/End: Original strand, 37179248 - 37179413
Alignment:
| Q |
76 |
aggaagtatagacttgtggatataattgggg-ttttatttgtgtgtattaaattagatatgtagtgtgtatagaaattaggattaattctggctgtatgc |
174 |
Q |
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| T |
37179248 |
aggaagtatagacttgtggatataattgggggttttatttgagtgtattaaattagatatgtagtgtgtatagaaattaggattaatt--ggctgtatac |
37179345 |
T |
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| Q |
175 |
attgtttgttgttatattctgcaagttttaattgtttgcatctacgtgaaaggggttcaagctctact |
242 |
Q |
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||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |
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| T |
37179346 |
attgtttgttgttatattctgcaagttttaattgtttgcatttatctgaaaggggttcaagctctact |
37179413 |
T |
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