View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19505_high_1 (Length: 822)

Name: NF19505_high_1
Description: NF19505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19505_high_1
NF19505_high_1
[»] chr5 (14 HSPs)
chr5 (610-805)||(33626685-33626881)
chr5 (476-610)||(33626380-33626526)
chr5 (180-238)||(21148103-21148161)
chr5 (180-238)||(42521697-42521755)
chr5 (180-240)||(21145925-21145986)
chr5 (180-228)||(23206200-23206248)
chr5 (166-238)||(492127-492199)
chr5 (166-238)||(3259064-3259136)
chr5 (166-238)||(3259799-3259871)
chr5 (166-238)||(4737038-4737109)
chr5 (166-238)||(14481451-14481523)
chr5 (166-226)||(25836601-25836661)
chr5 (171-223)||(42519647-42519699)
chr5 (181-228)||(42520438-42520485)
[»] chr4 (21 HSPs)
chr4 (12-224)||(4899969-4900180)
chr4 (180-228)||(45919513-45919561)
chr4 (134-228)||(13387730-13387823)
chr4 (180-228)||(4158617-4158665)
chr4 (180-228)||(41695386-41695434)
chr4 (166-238)||(42419701-42419773)
chr4 (198-238)||(42883472-42883512)
chr4 (174-227)||(4899415-4899469)
chr4 (172-228)||(550316-550373)
chr4 (181-238)||(21824549-21824606)
chr4 (181-238)||(21825154-21825210)
chr4 (187-228)||(29212010-29212051)
chr4 (179-228)||(41696125-41696174)
chr4 (180-228)||(46619633-46619681)
chr4 (179-238)||(36855670-36855729)
chr4 (166-228)||(6784843-6784905)
chr4 (181-227)||(31915167-31915212)
chr4 (177-227)||(36854912-36854962)
chr4 (177-238)||(12835178-12835239)
chr4 (166-235)||(19550217-19550286)
chr4 (179-236)||(24377954-24378011)
[»] scaffold0093 (2 HSPs)
scaffold0093 (54-228)||(22849-23022)
scaffold0093 (171-238)||(22764-22831)
[»] chr3 (27 HSPs)
chr3 (56-223)||(22258853-22259019)
chr3 (171-234)||(28907882-28907945)
chr3 (181-238)||(11238854-11238911)
chr3 (171-238)||(11238508-11238575)
chr3 (181-227)||(20199870-20199916)
chr3 (172-238)||(54584877-54584943)
chr3 (181-238)||(38798245-38798301)
chr3 (171-228)||(53949310-53949367)
chr3 (180-228)||(20200614-20200662)
chr3 (180-228)||(20202798-20202846)
chr3 (166-238)||(46914963-46915035)
chr3 (180-228)||(47167889-47167937)
chr3 (180-228)||(53950083-53950131)
chr3 (187-234)||(28908663-28908710)
chr3 (180-238)||(47169163-47169221)
chr3 (177-237)||(5531949-5532010)
chr3 (171-228)||(53948662-53948719)
chr3 (171-223)||(30833688-30833740)
chr3 (171-227)||(43400765-43400821)
chr3 (166-238)||(46915717-46915789)
chr3 (166-238)||(50802580-50802652)
chr3 (166-238)||(50873225-50873297)
chr3 (171-226)||(11239884-11239939)
chr3 (171-238)||(30834428-30834495)
chr3 (171-238)||(51827555-51827621)
chr3 (174-227)||(22259563-22259617)
chr3 (181-238)||(16302625-16302682)
[»] scaffold0009 (2 HSPs)
scaffold0009 (171-238)||(105502-105569)
scaffold0009 (171-228)||(106286-106343)
[»] scaffold0301 (1 HSPs)
scaffold0301 (187-238)||(20722-20773)
[»] chr8 (17 HSPs)
chr8 (171-238)||(39861648-39861715)
chr8 (171-227)||(25129352-25129408)
chr8 (181-228)||(5881145-5881192)
chr8 (171-238)||(29267936-29268003)
chr8 (180-222)||(29266170-29266212)
chr8 (180-225)||(5332179-5332224)
chr8 (177-238)||(16847675-16847736)
chr8 (171-228)||(25128588-25128645)
chr8 (166-238)||(24023013-24023085)
chr8 (171-238)||(29268811-29268879)
chr8 (180-228)||(42986648-42986696)
chr8 (171-221)||(36732081-36732131)
chr8 (171-233)||(39131025-39131087)
chr8 (171-228)||(3583287-3583344)
chr8 (171-228)||(3583638-3583695)
chr8 (171-228)||(17450528-17450585)
chr8 (197-238)||(34654941-34654982)
[»] chr7 (30 HSPs)
chr7 (171-238)||(30469504-30469571)
chr7 (171-238)||(43334123-43334189)
chr7 (180-238)||(8487021-8487079)
chr7 (180-238)||(8512696-8512754)
chr7 (171-228)||(31179915-31179972)
chr7 (171-238)||(3163494-3163561)
chr7 (171-228)||(3162871-3162928)
chr7 (165-238)||(37706312-37706385)
chr7 (180-228)||(8487814-8487862)
chr7 (180-228)||(8513469-8513517)
chr7 (166-238)||(30001795-30001867)
chr7 (166-238)||(30469429-30469501)
chr7 (180-228)||(38059849-38059897)
chr7 (171-238)||(3219296-3219363)
chr7 (171-226)||(21415391-21415446)
chr7 (171-238)||(30471002-30471069)
chr7 (171-238)||(43334723-43334790)
chr7 (174-223)||(4962374-4962424)
chr7 (177-239)||(30468684-30468746)
chr7 (171-228)||(3474904-3474961)
chr7 (171-228)||(30659857-30659914)
chr7 (171-228)||(37422561-37422618)
chr7 (166-226)||(30002549-30002609)
chr7 (166-238)||(32021214-32021286)
chr7 (181-228)||(46428125-46428172)
chr7 (166-228)||(24307098-24307160)
chr7 (180-238)||(31178632-31178690)
chr7 (166-228)||(42489963-42490025)
chr7 (171-228)||(3475567-3475624)
chr7 (181-226)||(43742724-43742769)
[»] chr6 (15 HSPs)
chr6 (171-238)||(19653861-19653928)
chr6 (171-238)||(8993581-8993648)
chr6 (171-238)||(9018028-9018095)
chr6 (180-228)||(19651073-19651121)
chr6 (171-238)||(1370151-1370218)
chr6 (171-237)||(14537998-14538064)
chr6 (180-233)||(9280898-9280951)
chr6 (171-228)||(18153260-18153317)
chr6 (171-228)||(18649895-18649952)
chr6 (171-228)||(32907429-32907486)
chr6 (171-238)||(1371049-1371115)
chr6 (172-238)||(19820864-19820930)
chr6 (187-228)||(8992909-8992950)
chr6 (187-228)||(9017356-9017397)
chr6 (177-238)||(18969852-18969913)
[»] chr1 (29 HSPs)
chr1 (171-238)||(21791478-21791545)
chr1 (179-238)||(26212910-26212969)
chr1 (171-238)||(46284746-46284813)
chr1 (180-238)||(5497293-5497351)
chr1 (171-228)||(21790752-21790809)
chr1 (180-228)||(7013041-7013089)
chr1 (186-238)||(10716944-10716996)
chr1 (180-228)||(39848883-39848931)
chr1 (180-228)||(47374849-47374897)
chr1 (181-228)||(5496547-5496594)
chr1 (171-238)||(16960123-16960190)
chr1 (171-238)||(29858915-29858981)
chr1 (179-238)||(39870815-39870874)
chr1 (179-238)||(42986748-42986807)
chr1 (171-228)||(5216563-5216620)
chr1 (171-228)||(14886826-14886883)
chr1 (171-236)||(40959768-40959833)
chr1 (171-228)||(42987079-42987136)
chr1 (171-228)||(46285543-46285600)
chr1 (187-238)||(27651324-27651375)
chr1 (179-238)||(48577560-48577619)
chr1 (171-237)||(4594699-4594765)
chr1 (166-228)||(24081456-24081518)
chr1 (180-238)||(39847800-39847857)
chr1 (171-228)||(4595572-4595629)
chr1 (171-228)||(14886154-14886211)
chr1 (187-228)||(16959505-16959546)
chr1 (195-228)||(17606265-17606298)
chr1 (171-224)||(27652097-27652150)
[»] chr2 (19 HSPs)
chr2 (180-238)||(42848709-42848767)
chr2 (171-238)||(8911158-8911225)
chr2 (187-243)||(121291-121347)
chr2 (166-238)||(863198-863270)
chr2 (180-228)||(42849504-42849552)
chr2 (181-228)||(122961-123008)
chr2 (171-238)||(19386287-19386354)
chr2 (181-227)||(13328818-13328864)
chr2 (171-237)||(20202643-20202709)
chr2 (181-243)||(39629521-39629583)
chr2 (187-228)||(4776989-4777030)
chr2 (171-228)||(8911833-8911890)
chr2 (171-236)||(13327738-13327803)
chr2 (171-238)||(24429610-24429677)
chr2 (171-238)||(27059168-27059235)
chr2 (187-228)||(4776249-4776290)
chr2 (181-238)||(34453012-34453069)
chr2 (179-228)||(38273553-38273602)
chr2 (179-228)||(38985992-38986041)
[»] scaffold0155 (1 HSPs)
scaffold0155 (171-238)||(990-1057)
[»] scaffold0853 (1 HSPs)
scaffold0853 (187-238)||(607-658)
[»] scaffold0188 (1 HSPs)
scaffold0188 (171-228)||(25616-25673)
[»] scaffold0050 (1 HSPs)
scaffold0050 (166-238)||(8403-8475)


Alignment Details
Target: chr5 (Bit Score: 177; Significance: 6e-95; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 610 - 805
Target Start/End: Original strand, 33626685 - 33626881
Alignment:
Q  610 aacgttggattatcttagattttacacgtcgaaattcttgac-aaggttatctaaaattttaccatgagtttacgactggcaagttttatgtcttcatgt 708  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  33626685 aacgttggattatcttagattttacacgtcgaaattcttgactaaggttatctcaaattttaccatgagtctacgactggcaagttttatgtcttcatgt 33626784  T
Q  709 cattgtgttagatctttatactgcatcatttcttaagtgtcattttgtgagagagcattttcataatttcgtctgaatcatggattgcgacttacat 805  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33626785 cattgtgttagatctttatactgcatcatttcttaagtgtcattttgtgagagagcattttcataatttcatctgaatcatggattgcgacttacat 33626881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 476 - 610
Target Start/End: Original strand, 33626380 - 33626526
Alignment:
Q  476 aggaattctctctgattttaaatcacaaataaaaaatcatttaacaa------------gtgcgagatcgaatcggatccttattgggtcatcgtatctt 563  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||            ||||||||||||||| |||||||||||||||||||||||||    
T  33626380 aggaattctctctaattttaaatcacaaataaaaaatcatttaacaattgttgcgtattgtgcgagatcgaatcagatccttattgggtcatcgtatctt 33626479  T
Q  564 gatccatgtgtattcaagagaagacgataaacaacaagaaaaataaa 610  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||    
T  33626480 gatccatgtgtatacaggagaagacgataaacaacaagaaaaataaa 33626526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 21148103 - 21148161
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  21148103 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatctcatatatat 21148161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 42521697 - 42521755
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  42521697 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatcccatatatat 42521755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 21145986 - 21145925
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctc-atatatattt 240  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||    
T  21145986 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatattt 21145925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 23206200 - 23206248
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  23206200 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 23206248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 492127 - 492199
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| | ||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  492127 aaatgaatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 492199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 3259136 - 3259064
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| | ||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  3259136 aaatgaatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 3259064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 3259799 - 3259871
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| ||||||||| ||||||| | | ||||||||| | |||||||||||||||| | |||||||||    
T  3259799 aaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaacccatatatat 3259871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 4737109 - 4737038
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| | ||||||||||||||| ||| ||||||||| | ||||||||||||| |||| |||||||||    
T  4737109 aaatgaatggataagatttgatgtcaaacttattttgacaccatggtgtcatttgatcttatc-catatatat 4737038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 14481451 - 14481523
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| | ||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  14481451 aaatgaatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 14481523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 25836601 - 25836661
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatccta 226  Q
    |||| ||||| ||||||||| ||||||||| | ||||||||| | ||||||||||||||||    
T  25836601 aaatgaatggatgagatttggtgtcaaaataattttgacaccatggtgtcatttgatccta 25836661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 42519699 - 42519647
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatc 223  Q
    |||||||  |||||| ||||||| ||||||||||||||| |||||||||||||    
T  42519699 aatggttatgatttggtgtcaaatttaatttgacaccttggtgtcatttgatc 42519647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 42520438 - 42520485
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||| ||||||| ||||||||||||||| |||| |||||||||||||    
T  42520438 atttggtgtcaaatttaatttgacaccttggtgttatttgatcctatc 42520485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 5e-80; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 12 - 224
Target Start/End: Original strand, 4899969 - 4900180
Alignment:
Q  12 caaaggaagtggttattaattactcatcatgaagannnnnnnagaatagacatgaattaggaaaaccttaaggttgaagaagacgcaaaattggaaataa 111  Q
    ||||||||||||| ||||||||||||| ||||||        ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  4899969 caaaggaagtggtcattaattactcattatgaaggtttttttagaatagacatgaattaggaaaaccttaaagttgaagaagacacaaaattggaaataa 4900068  T
Q  112 taatagtcacatgaactacattaatgatttaatatgagcctttgatcaaatactaaatcaatggttgagatttgatgtcaaaattaatttgacaccttag 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |    
T  4900069 taatagtcacatgaactacattaatgatttaatatgagcctttgatcaaatact-aatcaatggttgagatttggtgtcaagattaatttgacaccttgg 4900167  T
Q  212 tgtcatttgatcc 224  Q
    |||||||||||||    
T  4900168 tgtcatttgatcc 4900180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 45919561 - 45919513
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  45919561 gatttgatgtcaaatttaatttgacaccttggtgtcatttgatcctatc 45919513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 13387730 - 13387823
Alignment:
Q  134 aatgatttaatatgagcctttgatcaaatactaaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||| ||| |||||| | ||||||||||| ||||| || |||||||||||| ||| ||||||||||||||| ||| |||||| |||||| ||||    
T  13387730 aatgaattattatgagtcattgatcaaata-taaataaagggttgagatttggtgttaaaattaatttgacatcttggtgtcaattgatcatatc 13387823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 4158617 - 4158665
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  4158617 gatttggtgtcaaatttaatttgacacctaagtgtcatttgatcctatc 4158665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 41695434 - 41695386
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  41695434 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 41695386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 42419701 - 42419773
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| ||||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  42419701 aaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 42419773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 42883472 - 42883512
Alignment:
Q  198 atttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  42883472 atttgacaccttagtgtcatttgatcctatcccatatatat 42883512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 4899469 - 4899415
Alignment:
Q  174 ggttgagatttgatgtcaaaatt-aatttgacaccttagtgtcatttgatcctat 227  Q
    |||||||||||| |||||||||| ||||||||||||| ||| |||||||||||||    
T  4899469 ggttgagatttggtgtcaaaatttaatttgacaccttggtggcatttgatcctat 4899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 550316 - 550373
Alignment:
Q  172 atggttgagatttgatgtcaaaattaa-tttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| |||||||||||||||||| | ||||||||| | ||||||||||||||||||    
T  550316 atggttaagatttgatgtcaaaatttagtttgacaccatggtgtcatttgatcctatc 550373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 21824606 - 21824549
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||| |||||||||||||||  |||||||||||| |||| |||||||||    
T  21824606 atttggtgtcaaatttaatttgacaccttgatgtcatttgatcatatcccatatatat 21824549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 21825154 - 21825210
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||| ||||||||||||| | |||||||||||||||||| |||||||||    
T  21825154 atttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatc-catatatat 21825210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 29212051 - 29212010
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  29212051 tgtcaaatttaatttgacaccttggtgtcatttgatcctatc 29212010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 41696125 - 41696174
Alignment:
Q  179 agatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||| ||||||||||||||| || |||||||||||||||    
T  41696125 agatttggtgtcaaatttaatttgacaccttggtatcatttgatcctatc 41696174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 46619633 - 46619681
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||| ||||    
T  46619633 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcatatc 46619681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 36855670 - 36855729
Alignment:
Q  179 agatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  36855670 agatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 36855729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 6784905 - 6784843
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||| ||||| ||||||||| ||||||| | | ||||||||| | ||||||||||||||||||    
T  6784905 aaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatc 6784843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 31915212 - 31915167
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctat 227  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  31915212 atttggtgtcaaatttaatttgacacctt-gtgtcatttgatcctat 31915167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 36854962 - 36854912
Alignment:
Q  177 tgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctat 227  Q
    ||||||||||||||||| | | ||||||||| | |||||||||||||||||    
T  36854962 tgagatttgatgtcaaactaattttgacaccatggtgtcatttgatcctat 36854912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 12835178 - 12835239
Alignment:
Q  177 tgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||||| ||||||| | | ||||||||| | |||||||||||||||| | |||||||||    
T  12835178 tgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaacccatatatat 12835239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 19550217 - 19550286
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatata 235  Q
    |||| ||||| | ||||||| ||||||| | | ||||||||| | |||||||||||||||||| ||||||    
T  19550217 aaatgaatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatata 19550286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 24377954 - 24378011
Alignment:
Q  179 agatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatat 236  Q
    ||||||||||| ||| || ||||||||||||| |||||| |||||||||  |||||||    
T  24377954 agatttgatgttaaattttatttgacaccttaatgtcatctgatcctattccatatat 24378011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 115; Significance: 6e-58; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 54 - 228
Target Start/End: Complemental strand, 23022 - 22849
Alignment:
Q  54 agaatagacatgaattaggaaaaccttaaggttgaagaagacgcaaaattggaaataataatagtcacatgaactacattaatgatttaatatgagcctt 153  Q
    |||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||  ||||||||||| ||||||||||||||    
T  23022 agaatatacatgaattaggaaaacctaaaggttgaagaagacacaaaattggaaataataatagtcacgtgagttacattaatgaattaatatgagcctt 22923  T
Q  154 tgatcaaatactaaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||||| ||||  ||||||||||||||| |||||| |||||||||||| |||||||| |||||||||||||    
T  22922 tgatcaaatattaaa-gaatggttgagatttggtgtcaagattaatttgacatcttagtgttatttgatcctatc 22849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 22764 - 22831
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||| ||||| ||||||| | | ||||||||| | ||||||||||||||||||||||||||||    
T  22764 aatggatgaaatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatctcatatatat 22831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 5e-49; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 22259019 - 22258853
Alignment:
Q  56 aatagacatgaattaggaaaaccttaaggttgaagaagacgcaaaattggaaataataatagtcacatgaactacattaatgatttaatatgagcctttg 155  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| ||| |||||| ||||| ||||||| || | |||    
T  22259019 aatagacatgaattaggaaaacctgaaggttgaagaagacacaaaattggaaataataataatcacgtgagctacataaatgaattaatataagtcattg 22258920  T
Q  156 atcaaatactaaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatc 223  Q
     ||||||||| ||| |||||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  22258919 ttcaaatact-aataaatggttgagatttgatgtcaagattaatttgacacattggtgtcatttgatc 22258853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 28907945 - 28907882
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatat 234  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  28907945 aatggttaggatttgatgtcaaatttaatttgacaccttagtgtcatttgatcccgtctcatat 28907882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 11238911 - 11238854
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||||    
T  11238911 atttggtgtcacatttaatttgacaccttagtgtcatttgatcttatctcatatatat 11238854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 11238575 - 11238508
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| |||||||||||||||  ||||||||||||||||| |||||||||    
T  11238575 aatggttaggatttggtgtcaaatttaatttgacaccttgatgtcatttgatcctatcccatatatat 11238508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 20199916 - 20199870
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctat 227  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  20199916 atttgatgtcaaatttaatttgacaccttggtgtcatttgatcctat 20199870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 54584877 - 54584943
Alignment:
Q  172 atggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||||||| ||| ||| ||||||||| | |||||||||||||||||| |||||||||    
T  54584877 atggttaagatttgatgttaaatttagtttgacaccatggtgtcatttgatcctatcccatatatat 54584943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 38798301 - 38798245
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  38798301 atttggtgtcaaatttaatttgacaccatagtgtcatttgatcctatc-catatatat 38798245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 53949310 - 53949367
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  53949310 aatggttatgatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 53949367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 20200614 - 20200662
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  20200614 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 20200662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 20202798 - 20202846
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  20202798 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 20202846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 46915035 - 46914963
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| ||||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  46915035 aaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 46914963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 47167937 - 47167889
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  47167937 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 47167889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 53950083 - 53950131
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  53950083 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 53950131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 28908663 - 28908710
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatat 234  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||||    
T  28908663 tgtcaaatttaatttgacaccttagtgttatttgatcctatcccatat 28908710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 47169163 - 47169221
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||| ||||  ||||||||    
T  47169163 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcttatcctatatatat 47169221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 5531949 - 5532010
Alignment:
Q  177 tgagatttgatgtcaaaatt-aatttgacaccttagtgtcatttgatcctatctcatatata 237  Q
    ||||||||| |||||||||| |||| |||| ||||||||||||||||||||||  |||||||    
T  5531949 tgagatttggtgtcaaaatttaattcgacatcttagtgtcatttgatcctatcctatatata 5532010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 53948719 - 53948662
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||| | ||||||||||||||||||    
T  53948719 aatggttatgatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatc 53948662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 30833740 - 30833688
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatc 223  Q
    |||||||  |||||| ||||||| ||||||||||||||| |||||||||||||    
T  30833740 aatggttaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatc 30833688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 43400765 - 43400821
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctat 227  Q
    |||||||  |||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  43400765 aatggttatgatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctat 43400821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 46915717 - 46915789
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| | ||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  46915717 aaatgaatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 46915789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 50802580 - 50802652
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| ||||||||| ||||||| | | ||||||||| | |||||| ||||||||||| |||||||||    
T  50802580 aaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcaattgatcctatcccatatatat 50802652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 50873297 - 50873225
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| ||||||||| ||||||| | | ||||||||| | |||||| ||||||||||| |||||||||    
T  50873297 aaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcaattgatcctatcccatatatat 50873225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 11239884 - 11239939
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatccta 226  Q
    ||||| ||||||||| ||||| | ||||||||||||||| |||| |||||||||||    
T  11239884 aatggatgagatttggtgtcatatttaatttgacaccttggtgttatttgatccta 11239939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 30834428 - 30834495
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  ||||| |||||||| ||||||||| |||||  |||||||||||||||||  ||||||||    
T  30834428 aatggttaggatttaatgtcaaatttaatttgataccttgatgtcatttgatcctatcctatatatat 30834495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 51827621 - 51827555
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| |||||||||||||||  |||||||||||| |||| |||||||||    
T  51827621 aatggttatgatttggtgtcaaatttaatttgacaccttgatgtcatttgatcatatc-catatatat 51827555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 22259563 - 22259617
Alignment:
Q  174 ggttgagatttgatgtcaaaatt-aatttgacaccttagtgtcatttgatcctat 227  Q
    |||||||||||| |||||||||| |||||||||||||  ||| ||||||||||||    
T  22259563 ggttgagatttggtgtcaaaatttaatttgacaccttgatgttatttgatcctat 22259617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 16302682 - 16302625
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  16302682 atttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 16302625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 105569 - 105502
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  105569 aatggttaagatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatcccatatatat 105502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 106286 - 106343
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||||| ||||||||||||| ||||    
T  106286 aatggttaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcatatc 106343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 20773 - 20722
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  20773 tgtcaaatttaatttgacaccttggtgtcatttgatcctatctcatatatat 20722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 39861648 - 39861715
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||||||| ||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  39861648 aatggttaggatttgatgttaaatttaatttgacaccttggtgtcatttgatcctatcccatatatat 39861715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 25129352 - 25129408
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctat 227  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||| || ||||||    
T  25129352 aatggttacgatttgatgtcaaatttaatttgacaccttagtgtcatatggtcctat 25129408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 5881192 - 5881145
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  5881192 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 5881145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 29268003 - 29267936
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  29268003 aatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 29267936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 29266212 - 29266170
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgat 222  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  29266212 gatttgatgtcaaatttaatttgacaccttggtgtcatttgat 29266170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 5332179 - 5332224
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcct 225  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||    
T  5332179 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcct 5332224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 16847675 - 16847736
Alignment:
Q  177 tgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  16847675 tgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 16847736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 25128645 - 25128588
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||||| ||||||||||||| ||||    
T  25128645 aatggttatgatttggtgtcaaatttaatttgacaccttggtgtcatttgatcttatc 25128588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 24023013 - 24023085
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| ||||||||| ||||||| | | ||||||||| | |||||||||||||||| | |||||||||    
T  24023013 aaatgaatggatgagatttgttgtcaaactaattttgacaccatggtgtcatttgatcctaacccatatatat 24023085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 29268811 - 29268879
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctc-atatatat 238  Q
    ||||| ||||||||||||||||| | | ||||||||| | ||||||||||||| |||||| ||||||||    
T  29268811 aatggatgagatttgatgtcaaattaattttgacaccatggtgtcatttgatcatatctctatatatat 29268879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 42986696 - 42986648
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| |||||||||||| || ||||||||||||||||||    
T  42986696 gatttggtgtcaaatttaatttgacactttggtgtcatttgatcctatc 42986648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 36732081 - 36732131
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttga 221  Q
    |||||||  |||||| ||||||| ||||||||||||||| |||||||||||    
T  36732081 aatggttatgatttggtgtcaaatttaatttgacaccttggtgtcatttga 36732131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 39131025 - 39131087
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcata 233  Q
    |||||||  |||||| ||||||| ||||||||||||||  |||||||||||||| ||| ||||    
T  39131025 aatggttatgatttggtgtcaaatttaatttgacacctgggtgtcatttgatcccatcccata 39131087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 3583287 - 3583344
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||| ||||||||| ||||||| | | ||||||||| | ||||||||||||||||||    
T  3583287 aatggatgagatttggtgtcaaattaattttgacaccatggtgtcatttgatcctatc 3583344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 3583638 - 3583695
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||| ||||||||| ||||||| | | ||||||||| | ||||||||||||||||||    
T  3583638 aatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatc 3583695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 17450585 - 17450528
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| |||||||||||||   ||||||||||||||||||    
T  17450585 aatggttatgatttggtgtcaaatttaatttgacaccacggtgtcatttgatcctatc 17450528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 34654941 - 34654982
Alignment:
Q  197 aatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||||||| | |||||||||||||||||| |||||||||    
T  34654941 aatttgacaccatggtgtcatttgatcctatcccatatatat 34654982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 30469571 - 30469504
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  30469571 aatggttaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatcccatatatat 30469504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 43334189 - 43334123
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  43334189 aatggttatgatttgatgtcaaacttaatttgacaccttggtgtcatttgatcctatc-catatatat 43334123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 8487079 - 8487021
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  8487079 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatcccatatatat 8487021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 8512754 - 8512696
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  8512754 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatcccatatatat 8512696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 31179915 - 31179972
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  31179915 aatggttaagatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 31179972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 3163494 - 3163561
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| ||||||||||||| | |||||||||||||||||| |||||||||    
T  3163494 aatggttatgatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatcccatatatat 3163561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 3162928 - 3162871
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  3162928 aatggttaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 3162871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 37706312 - 37706385
Alignment:
Q  165 taaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||| ||||||||| ||||||| | | ||||||||| |||||||||||||||||| | |||||||||    
T  37706312 taaatgaatggatgagatttggtgtcaaactaattttgacaccatagtgtcatttgatcctaacccatatatat 37706385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 8487814 - 8487862
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  8487814 gatttggtgtcaaatttaatttgacaccttcgtgtcatttgatcctatc 8487862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 8513469 - 8513517
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  8513469 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 8513517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 30001867 - 30001795
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| | ||||||| ||||||| | | ||||||||| |||||||||||||||||||| |||||||||    
T  30001867 aaatgaatggataagatttggtgtcaaactaattttgacaccatagtgtcatttgatcctatcccatatatat 30001795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 30469429 - 30469501
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| | ||||||||||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  30469429 aaatgaatggataagatttgatgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 30469501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 38059897 - 38059849
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  38059897 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 38059849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 3219363 - 3219296
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||||  ||||| | ||||||||||||||| |||||||||||||||| | |||||||||    
T  3219363 aatggatgagatttagtgtcatatttaatttgacaccttggtgtcatttgatcctaacccatatatat 3219296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 21415391 - 21415446
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatccta 226  Q
    ||||| ||||||||| ||||| | ||||||||||||||| ||||||||||||||||    
T  21415391 aatggatgagatttggtgtcatatttaatttgacaccttggtgtcatttgatccta 21415446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 30471002 - 30471069
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  30471002 aatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 30471069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 43334723 - 43334790
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| ||||||||||| | | |||||||||||||||||| |||||||||    
T  43334723 aatggttatgatttggtgtcaaatttaatttgacatcatggtgtcatttgatcctatcccatatatat 43334790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 4962424 - 4962374
Alignment:
Q  174 ggttgagatttgatgtcaaaatt-aatttgacaccttagtgtcatttgatc 223  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  4962424 ggttgagatttggtgtcaaaatttaatttgacaccttggtgtcatttgatc 4962374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 30468746 - 30468684
Alignment:
Q  177 tgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatatt 239  Q
    ||||||||| ||||||| | | ||||||||| | |||||||||||||||| ||||||||||||    
T  30468746 tgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaactcatatatatt 30468684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 3474961 - 3474904
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||| |||| |||||||||||||||    
T  3474961 aatggttatgatttggtgtcaaatttaatttgacaccatagtatcatttgatcctatc 3474904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 30659914 - 30659857
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||| | ||||||||||||||||||    
T  30659914 aatggttatgatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatc 30659857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 37422618 - 37422561
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||||||||||| ||||||||||||| | || |||||||||||||||    
T  37422618 aatggttatgatttgatgtcaaatttaatttgacaccatggtatcatttgatcctatc 37422561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 30002549 - 30002609
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatccta 226  Q
    |||| ||||| ||||||||||||||||| | | ||||||||| | ||||||||||||||||    
T  30002549 aaatgaatggatgagatttgatgtcaaactaattttgacaccatggtgtcatttgatccta 30002609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 32021286 - 32021214
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| | ||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  32021286 aaatgaatgggtaagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 32021214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 46428125 - 46428172
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||| ||||||| ||||||||||||| | ||||||||||||||||||    
T  46428125 atttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatc 46428172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 24307098 - 24307160
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||| ||||| ||||||||||||||||| | | ||||||| | | ||||||||||||||||||    
T  24307098 aaatgaatggatgagatttgatgtcaaactaattttgacatcatggtgtcatttgatcctatc 24307160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 31178690 - 31178632
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||| ||||||||||| ||| ||||||||||||| ||||  ||||||||    
T  31178690 gatttggtgtcaaatttaatttgacatcttggtgtcatttgatcatatcctatatatat 31178632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 42489963 - 42490025
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||| ||||| ||||||||| ||||||| | | ||||||||| | ||||||||||||||||||    
T  42489963 aaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatc 42490025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 3475567 - 3475624
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| || |||||||||| | ||||||||||||||||||    
T  3475567 aatggttatgatttggtgtcaaatttgatttgacaccatggtgtcatttgatcctatc 3475624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 43742769 - 43742724
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatccta 226  Q
    ||||||||||||| ||||||||| |||||  |||||||||||||||    
T  43742769 atttgatgtcaaatttaatttgataccttgatgtcatttgatccta 43742724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 19653861 - 19653928
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  19653861 aatggttaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatcccatatatat 19653928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 8993581 - 8993648
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| ||||||||||||| | |||||||||||||||||| |||||||||    
T  8993581 aatggttatgatttggtgtcaaatttaatttgacaccgtggtgtcatttgatcctatcccatatatat 8993648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 9018028 - 9018095
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| ||||||||||||| | |||||||||||||||||| |||||||||    
T  9018028 aatggttatgatttggtgtcaaatttaatttgacaccgtggtgtcatttgatcctatcccatatatat 9018095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 19651121 - 19651073
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  19651121 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 19651073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 1370218 - 1370151
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  1370218 aatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 1370151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 14538064 - 14537998
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatata 237  Q
    ||||| ||| ||||||||||  | |||||||||||||||||||| ||||||||||| | ||||||||    
T  14538064 aatggatgaaatttgatgtcgtatttaatttgacaccttagtgttatttgatcctaacccatatata 14537998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 9280898 - 9280951
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcata 233  Q
    |||||| ||||||| |||||||||||| || |||||||||||||||||| ||||    
T  9280898 gatttggtgtcaaatttaatttgacacattggtgtcatttgatcctatcgcata 9280951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 18153317 - 18153260
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| |||||||||||| || ||||||||||||||||||    
T  18153317 aatggttaggatttggtgtcaaatttaatttgacactttggtgtcatttgatcctatc 18153260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 18649895 - 18649952
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||| | ||||||||||||||||||    
T  18649895 aatggttatgatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatc 18649952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 32907486 - 32907429
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||| ||||||| | ||||||||||| | ||||||||||||||||||    
T  32907486 aatggttaagatttggtgtcaaattaaatttgacaccatggtgtcatttgatcctatc 32907429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 1371049 - 1371115
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  1371049 aatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatc-catatatat 1371115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 19820864 - 19820930
Alignment:
Q  172 atggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||| ||||||| ||| ||| ||||| | || ||||||||||||||| |||||||||    
T  19820864 atggttaagatttggtgtcaaatttagtttaacaccatggtatcatttgatcctatcccatatatat 19820930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 8992950 - 8992909
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||||||||| | ||||||||||||||||||    
T  8992950 tgtcaaatttaatttgacaccatggtgtcatttgatcctatc 8992909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 9017397 - 9017356
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||||||||| | ||||||||||||||||||    
T  9017397 tgtcaaatttaatttgacaccatggtgtcatttgatcctatc 9017356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 18969852 - 18969913
Alignment:
Q  177 tgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||||  ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  18969852 tgagatttagtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 18969913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 21791478 - 21791545
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||| ||||||| ||||||| ||||||||||||| | |||||||||||||||||| |||||||||    
T  21791478 aatggttaagatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatcccatatatat 21791545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 26212969 - 26212910
Alignment:
Q  179 agatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||||    
T  26212969 agatttggtgtcaaattttatttgacaccttagtgtcatttgatcctatcccatatatat 26212910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 46284813 - 46284746
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||||||||||| |||||||||||| || |||||||||||||||||| |||||||||    
T  46284813 aatggttaggatttgatgtcaaatttaatttgacactttggtgtcatttgatcctatcccatatatat 46284746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 5497293 - 5497351
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||||    
T  5497293 gatttggtgtcaaatttaatttgacaccttggtatcatttgatcctatctcatatatat 5497351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 21790809 - 21790752
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  21790809 aatggttatgatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 21790752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 7013041 - 7013089
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  7013041 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 7013089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 10716944 - 10716996
Alignment:
Q  186 atgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||| ||||||||||||||| ||||||||||||| |||| |||||||||    
T  10716944 atgtcaaatttaatttgacaccttggtgtcatttgatcttatcccatatatat 10716996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 39848883 - 39848931
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  39848883 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 39848931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 47374849 - 47374897
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  47374849 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 47374897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 5496594 - 5496547
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  5496594 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 5496547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 16960123 - 16960190
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| ||||||||||||| |  ||||||||||||||||| |||||||||    
T  16960123 aatggttatgatttggtgtcaaatttaatttgacaccatgatgtcatttgatcctatcccatatatat 16960190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 29858981 - 29858915
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| ||||||||||| ||| |||||||||||||||||| |||||||||    
T  29858981 aatggttatgatttggtgtcaaatttaatttgacatcttggtgtcatttgatcctatc-catatatat 29858915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 39870815 - 39870874
Alignment:
Q  179 agatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||| ||||||| | ||||||||||| | ||||||||||||| ||||||||||||||    
T  39870815 agatttggtgtcaaactaaatttgacaccatggtgtcatttgatcatatctcatatatat 39870874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 42986807 - 42986748
Alignment:
Q  179 agatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||| ||||||| ||||||| ||| ||| ||||||||||||| ||||||||||||||    
T  42986807 agatttggtgtcaaatttaattttacatcttggtgtcatttgatcatatctcatatatat 42986748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 5216620 - 5216563
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||| | ||||| ||||||||||||| | ||||||||||||||||||    
T  5216620 aatggttaagatttggtatcaaatttaatttgacaccatggtgtcatttgatcctatc 5216563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 14886826 - 14886883
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||| | ||||||||||||||||||    
T  14886826 aatggttatgatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatc 14886883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 40959768 - 40959833
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatat 236  Q
    ||||| ||||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||    
T  40959768 aatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatat 40959833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 42987079 - 42987136
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||||||||||| |||||||||||| || || |||||||||||||||    
T  42987079 aatggttaggatttgatgtcaaatttaatttgacactttggtatcatttgatcctatc 42987136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 46285543 - 46285600
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||||| ||||||||||||| ||||    
T  46285543 aatggttaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcatatc 46285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 27651375 - 27651324
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||| ||||||||||||| | ||||||||||||| |||| |||||||||    
T  27651375 tgtcaaatttaatttgacaccatggtgtcatttgatcatatcccatatatat 27651324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 48577560 - 48577619
Alignment:
Q  179 agatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  48577560 agatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 48577619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 4594765 - 4594699
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatata 237  Q
    ||||| ||| ||||| ||||||| | | ||||||||| | |||||||||||||||||| ||||||||    
T  4594765 aatggatgaaatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatata 4594699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 24081518 - 24081456
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||| ||||| ||||||||| ||||||| | | ||||||||| | ||||||||||||||||||    
T  24081518 aaatgaatggatgagatttggtgtcaaattaattttgacaccatggtgtcatttgatcctatc 24081456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 39847857 - 39847800
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||| |||||||||||| || ||||||||||||||||||  ||||||||    
T  39847857 gatttggtgtcaaatttaatttgacac-ttggtgtcatttgatcctatcctatatatat 39847800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 4595572 - 4595629
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||| ||||||||| ||||||| | | ||||||||| | ||||||||||||||||||    
T  4595572 aatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatc 4595629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 14886211 - 14886154
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| || |||||||||| | ||||||||||||||||||    
T  14886211 aatggttatgatttggtgtcaaatttgatttgacaccatggtgtcatttgatcctatc 14886154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 16959546 - 16959505
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||||||||||| |||| |||||||||||||    
T  16959546 tgtcaaatttaatttgacaccttggtgttatttgatcctatc 16959505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 17606298 - 17606265
Alignment:
Q  195 ttaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||||||||||| ||||||||||||||||||    
T  17606298 ttaatttgacaccttggtgtcatttgatcctatc 17606265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 27652097 - 27652150
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcc 224  Q
    |||||||  |||||| ||||||| ||||||||||||| | ||||||||||||||    
T  27652097 aatggttatgatttggtgtcaaatttaatttgacaccatggtgtcatttgatcc 27652150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 42848767 - 42848709
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||| ||||||| |||||||||||||||| ||||||||||||||||| |||||||||    
T  42848767 gatttggtgtcaaatttaatttgacaccttattgtcatttgatcctatcccatatatat 42848709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 8911225 - 8911158
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| |||||||  |||||||||||| | ||||||||||||||||||||||||||||    
T  8911225 aatggttatgatttggtgtcaaatataatttgacaccatggtgtcatttgatcctatctcatatatat 8911158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 121347 - 121291
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatattttac 243  Q
    ||||||| |||||||||||||||||||||||||||||  ||| | ||||||||||||    
T  121347 tgtcaaatttaatttgacaccttagtgtcatttgatctcatcccttatatattttac 121291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 863270 - 863198
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| ||||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  863270 aaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 863198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 42849504 - 42849552
Alignment:
Q  180 gatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  42849504 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 42849552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 122961 - 123008
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  122961 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 123008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 19386354 - 19386287
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| ||||||||||||| | ||||||||||||| |||| |||||||||    
T  19386354 aatggttatgatttggtgtcaaatttaatttgacaccatggtgtcatttgatcatatcccatatatat 19386287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 13328818 - 13328864
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctat 227  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  13328818 atttggtgtcaaatttaatttaacaccttagtgtcatttgatcctat 13328864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 20202709 - 20202643
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatata 237  Q
    |||||||  |||||| ||||||| |||||||||||||   |||||||||||||||||| ||||||||    
T  20202709 aatggttatgatttggtgtcaaatttaatttgacaccacggtgtcatttgatcctatcccatatata 20202643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 39629521 - 39629583
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatattttac 243  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||| |||| |  |||||||||||    
T  39629521 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcatatccccaatatattttac 39629583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 4776989 - 4777030
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  4776989 tgtcaaatttaatttgacaccttggtgtcatttgatcctatc 4777030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 8911833 - 8911890
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    |||||||  |||||| ||||||| ||||||||||||| | ||||||||||||||||||    
T  8911833 aatggttatgatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatc 8911890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 13327803 - 13327738
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatat 236  Q
    |||||||  |||||| ||||||| ||||||| ||||||| ||||||||||||| |||| |||||||    
T  13327803 aatggttaggatttggtgtcaaatttaatttaacaccttggtgtcatttgatcttatcccatatat 13327738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 24429677 - 24429610
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||||| ||||||| | | ||||||||  | |||||||||||||||||| |||||||||    
T  24429677 aatggatgagatttggtgtcaaactaattttgacacgatggtgtcatttgatcctatcccatatatat 24429610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 27059235 - 27059168
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||||| ||| ||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  27059235 aatggatgagatttggtgtgaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 27059168  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 4776290 - 4776249
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| |||||||||||| |||||||||||||||| ||||    
T  4776290 tgtcaaatttaatttgacactttagtgtcatttgatcatatc 4776249  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 34453012 - 34453069
Alignment:
Q  181 atttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  34453012 atttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 34453069  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 38273602 - 38273553
Alignment:
Q  179 agatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||| || |||||||||||| |||| |||||||||||||    
T  38273602 agatttggtgtcaaattttatttgacaccttggtgttatttgatcctatc 38273553  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 38986041 - 38985992
Alignment:
Q  179 agatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||||| ||||||| | | ||||||||| ||||||||||||||||||||    
T  38986041 agatttggtgtcaaactaattttgacaccatagtgtcatttgatcctatc 38985992  T

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Target: scaffold0155 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 1057 - 990
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||||||  |||||| ||||||| |||||||||||| || |||||||||||||||||| |||||||||    
T  1057 aatggttaggatttggtgtcaaatttaatttgacactttggtgtcatttgatcctatcccatatatat 990  T

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Target: scaffold0853 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 658 - 607
Alignment:
Q  187 tgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    ||||||| |||||||||||| || |||||||||||||||||| |||||||||    
T  658 tgtcaaatttaatttgacacattggtgtcatttgatcctatcccatatatat 607  T

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Target: scaffold0188 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 25673 - 25616
Alignment:
Q  171 aatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatc 228  Q
    ||||| || |||||| ||||||| |||||||||||| || ||||||||||||||||||    
T  25673 aatggctgggatttggtgtcaaatttaatttgacacattggtgtcatttgatcctatc 25616  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 8475 - 8403
Alignment:
Q  166 aaatcaatggttgagatttgatgtcaaaattaatttgacaccttagtgtcatttgatcctatctcatatatat 238  Q
    |||| ||||| | ||||||| ||||||| | | ||||||||| | |||||||||||||||||| |||||||||    
T  8475 aaatgaatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatat 8403  T

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