View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19505_high_21 (Length: 251)

Name: NF19505_high_21
Description: NF19505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19505_high_21
NF19505_high_21
[»] chr4 (43 HSPs)
chr4 (11-204)||(46147193-46147387)
chr4 (11-202)||(26175436-26175632)
chr4 (11-199)||(47038219-47038407)
chr4 (11-202)||(48893443-48893634)
chr4 (11-200)||(52467159-52467350)
chr4 (11-203)||(9927257-9927454)
chr4 (1-202)||(31474313-31474512)
chr4 (1-202)||(6541987-6542185)
chr4 (11-204)||(12743726-12743921)
chr4 (16-202)||(36463196-36463382)
chr4 (11-205)||(12739350-12739546)
chr4 (11-209)||(45686980-45687178)
chr4 (11-200)||(56178438-56178632)
chr4 (1-204)||(4588121-4588322)
chr4 (11-204)||(5871992-5872185)
chr4 (30-207)||(37740820-37740999)
chr4 (11-204)||(34570212-34570410)
chr4 (11-140)||(36994695-36994824)
chr4 (30-203)||(5369880-5370055)
chr4 (11-202)||(48143216-48143417)
chr4 (1-200)||(37229531-37229727)
chr4 (11-204)||(52095160-52095358)
chr4 (11-203)||(52082462-52082659)
chr4 (11-202)||(54199708-54199903)
chr4 (11-168)||(29254666-29254826)
chr4 (30-144)||(5429874-5429989)
chr4 (1-179)||(48142209-48142382)
chr4 (1-204)||(5350071-5350270)
chr4 (1-149)||(24969827-24969978)
chr4 (1-157)||(29056521-29056681)
chr4 (1-204)||(5207649-5207848)
chr4 (11-157)||(13992136-13992288)
chr4 (1-81)||(51337226-51337306)
chr4 (33-137)||(3913775-3913876)
chr4 (1-58)||(21703784-21703841)
chr4 (1-93)||(37754874-37754965)
chr4 (122-203)||(29999627-29999709)
chr4 (11-94)||(29999719-29999805)
chr4 (85-202)||(51338324-51338434)
chr4 (8-92)||(39593647-39593731)
chr4 (36-99)||(31495209-31495271)
chr4 (8-49)||(6766043-6766084)
chr4 (170-202)||(36994866-36994898)
[»] chr7 (47 HSPs)
chr7 (1-202)||(31105200-31105399)
chr7 (11-202)||(41317238-41317430)
chr7 (6-202)||(26417483-26417685)
chr7 (30-206)||(14069629-14069806)
chr7 (30-206)||(14379657-14379834)
chr7 (11-202)||(1113829-1114021)
chr7 (11-203)||(41648813-41649007)
chr7 (11-202)||(47675936-47676132)
chr7 (30-204)||(18126841-18127017)
chr7 (11-203)||(36146211-36146404)
chr7 (11-202)||(19502351-19502547)
chr7 (1-202)||(23344135-23344332)
chr7 (15-203)||(23555217-23555411)
chr7 (12-198)||(43864417-43864609)
chr7 (30-206)||(4586356-4586534)
chr7 (11-202)||(8153514-8153705)
chr7 (11-203)||(47673743-47673940)
chr7 (11-201)||(48489603-48489798)
chr7 (11-202)||(38671025-38671218)
chr7 (1-202)||(31519065-31519258)
chr7 (15-202)||(48491754-48491944)
chr7 (11-157)||(495833-495979)
chr7 (11-168)||(24525340-24525498)
chr7 (11-202)||(25616026-25616223)
chr7 (30-202)||(31732768-31732942)
chr7 (1-203)||(36574323-36574522)
chr7 (11-203)||(27347989-27348186)
chr7 (5-157)||(23564914-23565064)
chr7 (45-149)||(30024610-30024714)
chr7 (11-84)||(12097790-12097863)
chr7 (11-168)||(29991226-29991387)
chr7 (9-168)||(35854086-35854250)
chr7 (1-202)||(4253335-4253534)
chr7 (11-168)||(4178946-4179107)
chr7 (1-150)||(40808750-40808897)
chr7 (6-157)||(48408973-48409130)
chr7 (30-106)||(39731567-39731642)
chr7 (86-206)||(12096962-12097081)
chr7 (9-157)||(25766802-25766956)
chr7 (1-56)||(3904418-3904473)
chr7 (170-204)||(6430464-6430498)
chr7 (30-96)||(43504058-43504123)
chr7 (11-73)||(2759127-2759193)
chr7 (8-57)||(26639495-26639544)
chr7 (17-93)||(18396488-18396563)
chr7 (120-202)||(30843286-30843367)
chr7 (170-202)||(3826176-3826208)
[»] chr3 (41 HSPs)
chr3 (6-202)||(21350811-21351004)
chr3 (19-204)||(39153162-39153348)
chr3 (11-204)||(22834805-22834999)
chr3 (11-203)||(29196188-29196382)
chr3 (5-204)||(32891270-32891460)
chr3 (1-203)||(51351940-51352139)
chr3 (11-204)||(23391710-23391905)
chr3 (11-202)||(9666270-9666462)
chr3 (11-205)||(31314617-31314811)
chr3 (14-203)||(44700283-44700472)
chr3 (11-203)||(761019-761212)
chr3 (11-204)||(29811040-29811239)
chr3 (1-202)||(2074883-2075081)
chr3 (15-203)||(29813239-29813431)
chr3 (4-202)||(27305519-27305713)
chr3 (15-204)||(7762442-7762637)
chr3 (11-202)||(7764637-7764834)
chr3 (11-204)||(23410129-23410325)
chr3 (11-205)||(19683684-19683884)
chr3 (11-202)||(29682531-29682726)
chr3 (11-206)||(51398986-51399186)
chr3 (11-204)||(40734670-40734867)
chr3 (11-203)||(5236256-5236453)
chr3 (15-202)||(9581459-9581652)
chr3 (11-168)||(16499201-16499348)
chr3 (11-213)||(40735555-40735760)
chr3 (9-204)||(9635921-9636122)
chr3 (11-202)||(37408631-37408827)
chr3 (1-84)||(53921426-53921509)
chr3 (11-167)||(5257979-5258139)
chr3 (60-202)||(9634621-9634764)
chr3 (11-167)||(5260158-5260318)
chr3 (30-168)||(45095359-45095497)
chr3 (11-101)||(32744349-32744432)
chr3 (1-64)||(33191993-33192056)
chr3 (2-150)||(2020323-2020467)
chr3 (30-157)||(23199982-23200108)
chr3 (170-204)||(4160057-4160091)
chr3 (172-204)||(44330955-44330987)
chr3 (126-204)||(37406981-37407059)
chr3 (30-106)||(23197835-23197909)
[»] chr2 (42 HSPs)
chr2 (12-202)||(39285012-39285202)
chr2 (21-205)||(2838132-2838316)
chr2 (11-204)||(723545-723740)
chr2 (11-203)||(34139572-34139766)
chr2 (11-205)||(36317810-36318005)
chr2 (11-168)||(11067477-11067634)
chr2 (11-202)||(33162254-33162446)
chr2 (11-202)||(11151395-11151587)
chr2 (11-202)||(42362520-42362713)
chr2 (11-202)||(24885761-24885953)
chr2 (11-203)||(36987874-36988071)
chr2 (11-203)||(14633627-14633821)
chr2 (11-204)||(11690673-11690858)
chr2 (1-203)||(11049716-11049913)
chr2 (11-203)||(14202223-14202417)
chr2 (11-202)||(2334218-2334413)
chr2 (30-203)||(38312435-38312608)
chr2 (11-204)||(17057167-17057365)
chr2 (11-204)||(17085150-17085348)
chr2 (11-202)||(36773734-36773926)
chr2 (15-202)||(29868045-29868237)
chr2 (11-202)||(6594804-6595001)
chr2 (6-105)||(1345634-1345733)
chr2 (1-200)||(13121928-13122124)
chr2 (1-203)||(12123392-12123591)
chr2 (11-157)||(45099927-45100077)
chr2 (11-168)||(36205499-36205660)
chr2 (11-185)||(5723072-5723251)
chr2 (11-202)||(4502933-4503128)
chr2 (1-149)||(26353346-26353485)
chr2 (30-157)||(4484173-4484300)
chr2 (1-202)||(17489958-17490154)
chr2 (30-106)||(30833544-30833619)
chr2 (30-106)||(32289764-32289839)
chr2 (1-91)||(7815190-7815280)
chr2 (97-203)||(1346413-1346519)
chr2 (14-56)||(41446315-41446357)
chr2 (1-199)||(4561247-4561435)
chr2 (127-202)||(41446426-41446500)
chr2 (1-56)||(42019821-42019875)
chr2 (1-58)||(7596960-7597017)
chr2 (9-58)||(28672102-28672151)
[»] chr8 (41 HSPs)
chr8 (9-206)||(19491499-19491696)
chr8 (11-200)||(41366420-41366611)
chr8 (15-202)||(40321256-40321442)
chr8 (2-154)||(1292317-1292469)
chr8 (11-202)||(1345176-1345367)
chr8 (11-202)||(4743027-4743210)
chr8 (11-202)||(30143512-30143708)
chr8 (11-204)||(6599144-6599335)
chr8 (11-204)||(6674597-6674788)
chr8 (11-202)||(15212958-15213155)
chr8 (15-202)||(5689447-5689635)
chr8 (11-204)||(43036595-43036793)
chr8 (11-198)||(3303474-3303666)
chr8 (5-202)||(10015245-10015443)
chr8 (20-204)||(18105874-18106058)
chr8 (1-196)||(3073686-3073880)
chr8 (11-204)||(4731830-4732028)
chr8 (11-203)||(12702430-12702630)
chr8 (35-157)||(27811478-27811601)
chr8 (30-202)||(33352345-33352518)
chr8 (11-157)||(42498367-42498518)
chr8 (11-168)||(34254165-34254326)
chr8 (1-202)||(8965492-8965697)
chr8 (19-202)||(8153967-8154147)
chr8 (11-203)||(17982826-17983022)
chr8 (11-126)||(18141990-18142105)
chr8 (11-166)||(44304028-44304187)
chr8 (11-203)||(1746017-1746214)
chr8 (11-168)||(34256341-34256502)
chr8 (11-157)||(4733878-4734029)
chr8 (11-204)||(19945156-19945354)
chr8 (40-203)||(3050924-3051090)
chr8 (11-84)||(30291780-30291853)
chr8 (11-205)||(31218430-31218628)
chr8 (15-203)||(32901988-32902175)
chr8 (1-202)||(11711805-11712005)
chr8 (120-206)||(3231642-3231728)
chr8 (62-203)||(4162692-4162833)
chr8 (30-106)||(2627935-2628009)
chr8 (93-203)||(7493246-7493353)
chr8 (21-134)||(7597798-7597909)
[»] chr6 (20 HSPs)
chr6 (7-205)||(14521475-14521677)
chr6 (3-202)||(28137211-28137412)
chr6 (11-202)||(16569194-16569389)
chr6 (19-207)||(26954086-26954274)
chr6 (11-200)||(3038729-3038919)
chr6 (30-168)||(9182865-9183004)
chr6 (11-168)||(5408904-5409065)
chr6 (11-168)||(5413229-5413390)
chr6 (11-132)||(33211060-33211181)
chr6 (11-168)||(33160185-33160347)
chr6 (11-206)||(16452123-16452324)
chr6 (11-167)||(31404510-31404670)
chr6 (11-168)||(5406037-5406195)
chr6 (11-168)||(5410362-5410520)
chr6 (5-200)||(4045584-4045773)
chr6 (11-202)||(30834333-30834531)
chr6 (62-106)||(2171424-2171468)
chr6 (138-204)||(257243-257308)
chr6 (1-63)||(12221048-12221110)
chr6 (170-203)||(602902-602935)
[»] chr1 (45 HSPs)
chr1 (9-206)||(41361085-41361282)
chr1 (1-206)||(23555067-23555272)
chr1 (15-202)||(13137780-13137968)
chr1 (11-202)||(833970-834163)
chr1 (11-203)||(40122000-40122192)
chr1 (11-203)||(50166979-50167171)
chr1 (11-202)||(45644158-45644350)
chr1 (11-202)||(1833685-1833876)
chr1 (11-202)||(28265359-28265550)
chr1 (30-204)||(28223219-28223394)
chr1 (11-201)||(30476247-30476442)
chr1 (11-206)||(3846917-3847117)
chr1 (1-204)||(16455783-16455986)
chr1 (11-204)||(37559662-37559863)
chr1 (30-203)||(28220025-28220199)
chr1 (11-168)||(50169049-50169206)
chr1 (15-204)||(10925402-10925592)
chr1 (27-203)||(8550583-8550760)
chr1 (11-202)||(196710-196903)
chr1 (35-205)||(4552445-4552616)
chr1 (11-168)||(3157037-3157199)
chr1 (1-202)||(927785-927982)
chr1 (11-200)||(13659153-13659332)
chr1 (1-200)||(15820469-15820659)
chr1 (30-209)||(31659433-31659613)
chr1 (11-203)||(44455332-44455529)
chr1 (11-208)||(49918522-49918724)
chr1 (11-208)||(46065090-46065284)
chr1 (11-202)||(37503362-37503553)
chr1 (11-206)||(20762845-20763041)
chr1 (1-150)||(5460069-5460216)
chr1 (1-202)||(37282498-37282697)
chr1 (11-198)||(3189503-3189708)
chr1 (11-198)||(3198320-3198525)
chr1 (11-198)||(3207159-3207364)
chr1 (30-202)||(13316151-13316324)
chr1 (35-149)||(8870581-8870695)
chr1 (30-106)||(51765595-51765670)
chr1 (1-58)||(3460858-3460915)
chr1 (1-133)||(2262850-2262979)
chr1 (1-51)||(36683842-36683892)
chr1 (1-149)||(44646667-44646810)
chr1 (1-64)||(16914118-16914181)
chr1 (1-149)||(44650025-44650168)
chr1 (119-157)||(36683894-36683932)
[»] chr5 (34 HSPs)
chr5 (11-200)||(538197-538387)
chr5 (30-203)||(42426034-42426208)
chr5 (30-204)||(42428228-42428403)
chr5 (10-207)||(16649630-16649827)
chr5 (11-203)||(30682721-30682919)
chr5 (1-205)||(42927053-42927263)
chr5 (11-204)||(533941-534129)
chr5 (11-202)||(28750455-28750651)
chr5 (11-201)||(13239924-13240118)
chr5 (9-202)||(8565748-8565945)
chr5 (11-203)||(5887234-5887430)
chr5 (11-200)||(32636996-32637190)
chr5 (30-202)||(19806558-19806729)
chr5 (40-202)||(13488406-13488569)
chr5 (30-202)||(39468348-39468522)
chr5 (11-203)||(31183143-31183342)
chr5 (11-202)||(33831852-33832046)
chr5 (1-157)||(16452242-16452398)
chr5 (11-168)||(37439314-37439474)
chr5 (15-167)||(13343237-13343393)
chr5 (11-204)||(30182761-30182959)
chr5 (11-168)||(36073877-36074038)
chr5 (11-167)||(25412933-25413093)
chr5 (123-206)||(3075545-3075629)
chr5 (1-204)||(13695493-13695696)
chr5 (1-148)||(9049209-9049348)
chr5 (30-106)||(16409675-16409750)
chr5 (30-101)||(26178082-26178152)
chr5 (30-101)||(26170962-26171032)
chr5 (1-84)||(30897575-30897657)
chr5 (1-43)||(30793298-30793340)
chr5 (170-202)||(40147578-40147610)
chr5 (9-52)||(9299754-9299797)
chr5 (3-33)||(3075632-3075662)
[»] scaffold1668 (1 HSPs)
scaffold1668 (11-202)||(1301-1494)
[»] scaffold0006 (1 HSPs)
scaffold0006 (11-200)||(148914-149093)
[»] scaffold0066 (1 HSPs)
scaffold0066 (11-203)||(20215-20411)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-204)||(27248-27447)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-168)||(114775-114937)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-106)||(434706-434805)
[»] scaffold0491 (2 HSPs)
scaffold0491 (36-106)||(8630-8699)
scaffold0491 (30-106)||(11056-11131)
[»] scaffold1519 (1 HSPs)
scaffold1519 (30-106)||(1112-1187)


Alignment Details
Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 46147387 - 46147193
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| ||| ||     
T  46147387 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtattgttattattgttgt 46147288  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    ||| |||||| |||||||||||||||||||||||||||| ||||||| || ||||||| ||||||||||||||||||| | ||||||||||||||    
T  46147287 tgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgcattggtgtgagttttgaggcggaattcacaacaat 46147193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 26175632 - 26175436
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||    
T  26175632 ttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattg 26175533  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||  ||| |||||||||||||| |||||||||||||||||||| ||||||| || |||||||  |||||||||||||||||||||||||||||||||    
T  26175532 ctattgcttgtgtttactttgaaattggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 26175436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 47038407 - 47038219
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |      
T  47038407 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgttat 47038308  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcaca 199  Q
    ||  |||||||||||||||||||||||||||||||||||  |||||| || |||||||  |||||||||| |||||||||| ||||||||    
T  47038307 tgtttgtgtttactttgatattggttactactttcctttgttccacacatcatagtttgtattggtgtga-ttttgagtccaaattcaca 47038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 48893634 - 48893443
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| | ||||| ||||||||| ||||||||||| |      
T  48893634 ttggtgtgtttgtttctcttctctctttatcttttgcttgtgattttgtgcttttcactttgattcttggattagatctaggtgctgttattgttgttat 48893535  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||||||||||||||||    
T  48893534 tgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaaca 48893443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 52467350 - 52467159
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctg- 109  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||| ||     
T  52467350 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctatgtgttgttattattgatga 52467251  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaa 200  Q
     ||| ||| |||||||||||||||||||| |||||||||| || |||| || |||||||  |||||||||||||||||||||||||||||||    
T  52467250 ttgcttgtctttactttgatattggttaccactttcctttgcttcacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 52467159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 9927454 - 9927257
Alignment:
Q  11 ttggtgtgtttgtttctct--tctc-cctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg- 106  Q
    |||||||||||||| ||||  |||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||     
T  9927454 ttggtgtgtttgttcctctattctctcctttatcttttgcttgtggatttgtgcttttcactttgattcctagattaaatctaggtgctgttattgttga 9927355  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
     |  ||| ||||||||||||||||||||| ||||||||||||| ||||||| || |||||||  ||||||| ||||||||||||||||||||||||||    
T  9927354 ttattgcttgtgtttactttgatattggtaactactttcctttgctccacacatcatagtttatattggtgcgagttttgagtccgaattcacaacaa 9927257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 31474313 - 31474512
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||| || ||||| |||||||||||| |||||||||||| |||||||||||||||    
T  31474313 taaacatatcttggtgtgtttgtttctcttctccctttatctttagcttttgattttgtgcttttcactttaattcctagattagatctaggtgttgtta 31474412  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcaca 199  Q
    |||||| || ||  ||||||||||||||||||| ||||||||||| ||| || |||| || || ||||  ||||||||||   |||||||||||||||||    
T  31474413 ttgttgttgttgtttgtgtttactttgatattgattactactttcatttgctacacacatcattgtttgtattggtgtga---ttgagtccgaattcaca 31474509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 6542185 - 6541987
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    |||||||||||||||||||||||||||||| || ||||||||||| |||||| ||||| | |||||||||| |||||||||||| |||||||| ||||||    
T  6542185 taaacatttcttggtgtgtttgtttctcttatctctttatctttttcttgtgattttgtgtttttcactttaattcctagattagatctaggttttgtta 6542086  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    |||||| ||||   |||| |||||||||||||||||| ||||||||||| ||||||| || | ||| | |||| ||||||||||  ||||||||||||||    
T  6542085 ttgttgttgct---tgtgattactttgatattggttattactttcctttgctccacacatcaaagtattattgatgtgagttttatgtccgaattcacaa 6541989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 12743921 - 12743726
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||| |||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||| |||    
T  12743921 ttggtgtgtttgttcctctcttttctccttttatcttttgcttgtagttttgtgcttttcactttgattactagattagatctaggtgttgttattattg 12743822  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
     ||||   |||||||||||||| |||||||||||||||||||| ||||||| |  |||||||  |||||||||||||||||||||||||||||||||||    
T  12743821 ttgct---tgtgtttactttgaaattggttactactttcctttgctccacacaacatagtttgtattggtgtgagttttgagtccgaattcacaacaat 12743726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 36463382 - 36463196
Alignment:
Q  16 gtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcct 115  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| | | |||| ||||||||||||||||| ||| || ||| |    
T  36463382 gtgtttgtttctcttctctctttatcttttgcttgtggttttgagtttttcgctttgattaccaaattagatctaggtgttgttattattgttgttgctt 36463283  T
Q  116 gtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    |||||||||||||||||||||| ||||||||||| ||||||| || |||||||  ||| |||||| ||||||||||||||||||||||    
T  36463282 gtgtttactttgatattggttattactttcctttactccacacatcatagtttgtattagtgtga-ttttgagtccgaattcacaaca 36463196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 12739546 - 12739350
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||| ||||||||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||||| ||     
T  12739546 ttggtgtgtttgttcctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattacttgattagatctaggtgttgttattatta 12739447  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaata 205  Q
     ||||   |||||||||||||| |||||||||||||||| ||| ||||||| || |||||||  ||||||||||||||||||||||||||||||||||||    
T  12739446 ttgct---tgtgtttactttgaaattggttactactttcttttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaata 12739350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 45687178 - 45686980
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||     
T  45687178 ttggtgtgtttgtttcttttctctctttatctgttgcttgtggttttgagcttttcactttgattactagatt-gatctaggtgttgttattattgttgt 45687080  T
Q  111 tgcctg-tgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaataaca 208  Q
    ||| || ||||| ||||||||||||||||||||||||||| ||||| | || |||||||  |||||||||| ||||||||| ||||||||||||| ||||    
T  45687079 tgcttgttgtttgctttgatattggttactactttcctttgctccatacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacaaaaaca 45686981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 56178632 - 56178438
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattg-tt 105  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| ||    
T  56178632 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttcattcctagattagatctaggtgttgttattgttt 56178533  T
Q  106 gctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaa 200  Q
      |  ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||||||||||||||    
T  56178532 attattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 56178438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 4588121 - 4588322
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||| |||||||||||||||||||| |||| || | ||| ||||||    
T  4588121 taaacatttcatggtgtgtttgtttctcctctctctttatcttttgcttgtgattttgtgcttttcactttgattcctatattagatattggttttgtta 4588220  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgag-ttttgagtccgaattcaca 199  Q
    |||||| || |   |||| || |||||||| ||||||||| |||||||| ||||||| || | ||| | ||||||||||| |||||||||||||||||||    
T  4588221 ttgttgttgtt---tgtgattgctttgatagtggttactattttcctttgctccacacatcaaagtattattggtgtgagtttttgagtccgaattcaca 4588317  T
Q  200 acaat 204  Q
    |||||    
T  4588318 acaat 4588322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 5871992 - 5872185
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||| ||||||  |||| || |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| |    
T  5871992 ttggtgtgtttgattctctcttctctctctatcttttgcttttggttttgagcttttcactttgattactagattagatctaggtgttgttattattgtt 5872091  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    | ||  |||||| |||||||||||||||||||||||||||| ||||||| ||   |||||  |||||||||| ||||||||||| ||||||||||||    
T  5872092 gttgtttgtgttcactttgatattggttactactttcctttgctccacacat--cagtttgtattggtgtga-ttttgagtccggattcacaacaat 5872185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 207
Target Start/End: Original strand, 37740820 - 37740999
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||||||  |  ||  | |||| |||||||    
T  37740820 tctccctttatcttttgcttgtggttttgtgcttttcactttgattcctacattagatctaggtgctgttattgttgattattgattctgttcactttga 37740919  T
Q  129 tattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaataac 207  Q
    ||||| ||||||||||||| | ||||||| || |||||||  |||||||||||||||||||||||||| |||||| ||||    
T  37740920 tattgattactactttcctgtgctccacacatcatagtttgtattggtgtgagttttgagtccgaatttacaacagtaac 37740999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 34570410 - 34570212
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  34570410 ttggtgtgtttgttcctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattcttagattagatctaggtgttgttattgttg 34570311  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
      |  ||  |||||| | |||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| |||||| ||||||||| |||||||    
T  34570310 attattgtttgtgttcattttgatattggttactactttcctttgctccacacatcatagtttatattggtgtga-ttttgaatccgaattcgcaacaat 34570212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 36994695 - 36994824
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||| ||     
T  36994695 ttggcgtgtttgtttctcttctctctttatcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgt 36994794  T
Q  111 tgcctgtgtttactttgatattggttacta 140  Q
    ||| |||||||||||||| |||| ||||||    
T  36994795 tgcttgtgtttactttgaaattgattacta 36994824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 30 - 203
Target Start/End: Complemental strand, 5370055 - 5369880
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||  |  ||| |||||| |||||||    
T  5370055 tctccttttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttga 5369956  T
Q  129 tattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaacaa 203  Q
    ||||| ||||||||||||||| ||||||| || |||||||  |||||||||| ||||||| || |||||||||||||    
T  5369955 tattgattactactttcctttactccacacatcatagtttgtattggtgtga-ttttgagaccggaattcacaacaa 5369880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 48143216 - 48143417
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagctttt----cactttgattcctagattaaatctaggtgttgttatt 102  Q
    |||||||||||||||||||    ||||| ||||||||||||||||| ||||| ||||||    ||||||||||||||||||| |||||||||||||||||    
T  48143216 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtgattttgtgcttttttttcactttgattcctagattagatctaggtgttgttatt 48143315  T
Q  103 gttg-ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcaca 199  Q
    ||||  |  ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| |||||||||| |||||||||    
T  48143316 gttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccggaattcaca 48143414  T
Q  200 aca 202  Q
    |||    
T  48143415 aca 48143417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 37229727 - 37229531
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||| |||||||||||| ||||||| |||| |||||||| | ||||    
T  37229727 taaacatttcttggcgtgtttgtttctcttctctctttatcttttacttatggttttgtgcttttcacttt-attcctaaattagatctaggt-tggtta 37229630  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    |||||| |  ||| |||  |||||||||||||||||||||||| || || ||||||| |  ||||||| |||||| | | ||||||||||||||||||||    
T  37229629 ttgttgttattgcttgttgttactttgatattggttactacttcccattgctccacacaacatagttttattggtttta-ttttgagtccgaattcacaa 37229531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 52095358 - 52095160
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| |||||||||| |||||||||||| ||||||| |||||| |||||||||| |||||||||||||||||||||    
T  52095358 ttggtgtgtttgtttctctcttctctccttttatcttttccttgtggttttgtgcttttctctttgactcctagattagatctaggtgttgttattgttg 52095259  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
      |  | | |||||| |||||||||||| |||||||||||||||  ||||||  | |||||||  |||||||||| ||||||||||||||||||||||||    
T  52095258 attattacttgtgttcactttgatattgattactactttcctttgttccacacgtcatagtttgtattggtgtga-ttttgagtccgaattcacaacaat 52095160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 52082659 - 52082462
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||||||||||||| |||    ||||| ||||||||||||||||||||||  |||||||  |||||||||||||| | ||||||||| |||||||||||    
T  52082659 ttggtgtgtttgtttatctcttctctccttttatcttttgcttgtggttttatgcttttctttttgattcctagataagatctaggtgctgttattgttg 52082560  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
      |  ||| |||||| ||||||||||||||||||||||||||||  |||||| || ||| |||  |||||||||| |||||||||||||||||||||||    
T  52082559 attattgcttgtgttcactttgatattggttactactttcctttgttccacacatcataatttgtattggtgtga-ttttgagtccgaattcacaacaa 52082462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 54199903 - 54199708
Alignment:
Q  11 ttggtgtgtttgtt--tctcttctc-cctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg- 106  Q
    ||||||||||||||  ||||||||| ||||||| |||||||||||| |||| ||||||||||||||||| ||||||| ||||||||| |||||||| ||     
T  54199903 ttggtgtgtttgttcctctcttctctcctttatattttgcttgtggatttgtgcttttcactttgattcttagattagatctaggtgatgttattgctga 54199804  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
     |  ||| |||||| ||||||||| |||||||||||||||||| ||||| | || || ||||  |||||||||| ||||||||||||||||||||||    
T  54199803 ttattgcttgtgttcactttgatactggttactactttcctttgctccatacatcatcgtttgtattggtgtga-ttttgagtccgaattcacaaca 54199708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 168
Target Start/End: Original strand, 29254666 - 29254826
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||| ||||||||||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||| |||    
T  29254666 ttggtgtgtttgttcctctattctctccatttatcttttgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattattg 29254765  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      | ||  |||||| ||||| ||||||||||||||||| |||| ||||||| || |||||||    
T  29254766 tcgttgtttgtgttcactttaatattggttactacttt-ctttgctccacacatcatagttt 29254826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 5429874 - 5429989
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  |  ||  |||||| |||||||    
T  5429874 tctccctttatcttttacttgtggttttgagcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttga 5429973  T
Q  129 tattggttactacttt 144  Q
    ||||| ||||||||||    
T  5429974 tattgattactacttt 5429989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 48142382 - 48142209
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||   | ||||||| |||||||||||||||    | | ||||||||    
T  48142382 taaacattttttggtgtgtttgtttctcttctctctttatcttttgattgtggtttaatgtttttcac-ttgattcctagatta----ttgttgttgtta 48142288  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtga 179  Q
    ||||||||| ||  ||   ||||||| |||||||||| ||||||||||| ||||||| ||   ||||| ||||||||||    
T  48142287 ttgttgctgttgtttgatgttactttaatattggttattactttcctttgctccacacatctaagttttattggtgtga 48142209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 5350071 - 5350270
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||| |||| || ||| | ||||||| |||||||||  || | |||||||| ||||||    
T  5350071 taaacatttattggtgtgtttgtttctcttctctcgttatcttttgtttgtagtcttgtgtttttcac-ttgattcctgtatgagatctaggt-ttgtta 5350168  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    |||||| || | | ||   ||| ||| |||||||||||||||||||||| || |||| |    ||||| ||||||||||| |||||||||||||||||||    
T  5350169 ttgttgttgttacgtgatgtta-ttttatattggttactactttcctttacttcacacacctaagttt-attggtgtgagatttgagtccgaattcacaa 5350266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 24969827 - 24969978
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgag---cttttcactttgattcctagattaaatctaggtgttg 97  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||    ||||||||| ||||  ||||||| ||||||||||      
T  24969827 taaacatttcttggtgtgtttgtttctcttctcactttatcgtttgcttatggttttgagttttttttcacttagattagtagattagatctaggtgtct 24969926  T
Q  98 ttattgttgctgctgcctgtgtttactttgatattggttactactttccttt 149  Q
       || ||| || ||  |||| ||| ||||||||||||||||||||||||||    
T  24969927 actttcttgttgttggttgtgattattttgatattggttactactttccttt 24969978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 29056521 - 29056681
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctag-----gtgt 95  Q
    |||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||| | ||||||| ||||||||||||||| ||||||      | |    
T  29056521 taaacacttcttggtgtgtttgtttctcttttctctttatcttttgtttgtggttttgtgtttttcac-ttgattcctagattagatctagttttttttt 29056619  T
Q  96 tgttattgttgctgctgcctgtgtttactttgatattggttactactttccttttctccaca 157  Q
    | ||||||||| || | | || | ||| |||||||||| |||||| ||||||||||||||||    
T  29056620 ttttattgttgttgttacttgaggttattttgatattgattactattttccttttctccaca 29056681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 5207848 - 5207649
Alignment:
Q  1 taaacatttcttggtgtgt--ttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgt 98  Q
    ||||||||| |||||||||  ||||||||||||||  ||||||| |||| |||||||||| ||||||||| |||||||||| |||| |||||||| |||     
T  5207848 taaacatttattggtgtgtatttgtttctcttctctatttatctgttgcatgtggttttgtgcttttcac-ttgattcctaaattagatctaggt-ttga 5207751  T
Q  99 tattgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcac 198  Q
    |||||||| ||||   || | ||||||||||||   ||||||||||||||| ||||||| |  ||| ||  |||||||||| ||||||||| | ||| ||    
T  5207750 tattgttgttgct---tgaggttactttgatatcaattactactttcctttgctccacacaccatatttatattggtgtga-ttttgagtctgcattaac 5207655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 13992288 - 13992136
Alignment:
Q  11 ttggtgtgtttgtttctct----tctcccttt-atctttt-gcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgt 104  Q
    |||||||||||||||||||    ||||||||| ||||||| ||||||| ||| | ||||||||||||||| ||||||||| ||||||||| |||||||||    
T  13992288 ttggtgtgtttgtttctctcttctctcccttttatctttttgcttgtgattt-gtgcttttcactttgatacctagattagatctaggtgctgttattgt 13992190  T
Q  105 tg-ctgctgcctgtgtttactttgatattggttactactttccttttctccaca 157  Q
    ||  |  ||| ||   | |||||| ||||||||||||||||||||| |||||||    
T  13992189 tgattattgcttgcactcactttgttattggttactactttcctttgctccaca 13992136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 51337226 - 51337306
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctaga 81  Q
    |||||||||| |||||||||||||| |||||||  ||||||||||||||||| ||||| ||| ||||||  ||||||||||    
T  51337226 taaacatttcgtggtgtgtttgtttatcttctctttttatcttttgcttgtgattttgtgctcttcactccgattcctaga 51337306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 3913775 - 3913876
Alignment:
Q  33 ccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgatatt 132  Q
    |||||| |||||| |||||||||||   |||||||||||||||||||||||| || ||| || | ||||||||  ||||   ||||||||||||||||||    
T  3913775 ccctttttcttttacttgtggttttatacttttcactttgattcctagattagatatagatgctcttattgttattgct---tgtgtttactttgatatt 3913871  T
Q  133 ggtta 137  Q
    |||||    
T  3913872 ggtta 3913876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21703841 - 21703784
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttg 58  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||    
T  21703841 taaacatttcttgatgtgtttgtttctcttctctctttatattttgcttgtgattttg 21703784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37754965 - 37754874
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggt 93  Q
    |||| ||||||| |||||||||||| ||||||| ||||||||| || ||||||||||| |||||  || ||||| ||||||||| ||||||||    
T  37754965 taaatatttcttagtgtgtttgtttttcttctctctttatcttatgtttgtggttttgggctttatac-ttgatccctagattagatctaggt 37754874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 29999709 - 29999627
Alignment:
Q  122 actttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaacaa 203  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||| || |||||||||||||    
T  29999709 actttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagaccggaattcacaacaa 29999627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 29999805 - 29999719
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtg 94  Q
    |||||||||||||||||||    ||||| ||| ||||||||||||||||| | | ||||| ||||||||||||||||| |||||||||    
T  29999805 ttggtgtgtttgtttctctcttctctccttttgtcttttgcttgtggttt-gtgtttttctctttgattcctagattagatctaggtg 29999719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 51338324 - 51338434
Alignment:
Q  85 aatctaggtgttgttattgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagtttt 184  Q
    ||||||||| |||||||||||| ||||   ||||  ||||||||||||| ||||||||||| ||| |||||| ||    |||   || ||||||||||||    
T  51338324 aatctaggttttgttattgttgttgct---tgtgactactttgatattgattactactttcatttgctccaccaa----agtactatcggtgtgagtttt 51338416  T
Q  185 gagtccgaattcacaaca 202  Q
    ||||||||||||| ||||    
T  51338417 gagtccgaattcaaaaca 51338434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 39593731 - 39593647
Alignment:
Q  8 ttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctagg 92  Q
    |||||||||||||||| |||| ||||   |||||||||||||| ||||||| ||||||   |||| || |||||||| |||||||    
T  39593731 ttcttggtgtgtttgtgtctcctctcttcttatcttttgcttgcggttttgtgcttttacatttggtttctagattagatctagg 39593647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 31495271 - 31495209
Alignment:
Q  36 tttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtt 99  Q
    |||||||| |||||||| ||||  ||||||||||||| ||||||||||| ||||||||| ||||    
T  31495271 tttatcttgtgcttgtg-ttttatgcttttcactttgtttcctagattagatctaggtgctgtt 31495209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 6766084 - 6766043
Alignment:
Q  8 ttcttggtgtgtttgtttctcttctccctttatcttttgctt 49  Q
    ||||||||||||||||||| |||||| | |||||||||||||    
T  6766084 ttcttggtgtgtttgtttcacttctcacattatcttttgctt 6766043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 36994866 - 36994898
Alignment:
Q  170 attggtgtgagttttgagtccgaattcacaaca 202  Q
    |||||||||||||||||||| ||||||||||||    
T  36994866 attggtgtgagttttgagtcagaattcacaaca 36994898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 31105399 - 31105200
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatctttt-gcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtt 99  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  31105399 taaacatttcttggtctgtttgtttctcttctctccttatctttttgcttgtggttttgagcttttcactttgattcctagattagatcttggtgttgtt 31105300  T
Q  100 attgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcaca 199  Q
    ||||||| ||||   ||||||||||||||||||| ||||||||||||||| ||||||| || ||||||| |||||||||||||||| || ||||||||||    
T  31105299 attgttgttgct---tgtgtttactttgatattgattactactttcctttactccacacatcatagttttattggtgtgagttttgtgttcgaattcaca 31105203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 41317430 - 41317238
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||     
T  41317430 ttggtgtgtttgtttctcctctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgt 41317331  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| |||||| |||||||||||||||||||||||||||| ||||| | || |||||||  ||||||||||| ||||||| |||||||||||||    
T  41317330 tgcttgtgttcactttgatattggttactactttcctttgctccaaacatcatagtttgtattggtgtgagatttgagttcgaattcacaaca 41317238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 6 - 202
Target Start/End: Original strand, 26417483 - 26417685
Alignment:
Q  6 atttcttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttat 101  Q
    ||||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  26417483 atttcttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgagcttttcactttgattcatagattatatctaggtgctgttat 26417582  T
Q  102 tgttg-ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcaca 199  Q
    |||||  |  ||| |||| |||||||||||||||||||||||||||||| ||||||| || |||||||  ||||||||||||||||||||||||||||||    
T  26417583 tgttgattattgcttgtggttactttgatattggttactactttcctttactccacatatcatagtttgtattggtgtgagttttgagtccgaattcaca 26417682  T
Q  200 aca 202  Q
    |||    
T  26417683 aca 26417685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 30 - 206
Target Start/End: Complemental strand, 14069806 - 14069629
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgat 129  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||  || ||| ||||||||||||||     
T  14069806 tctccctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgtttactttgaa 14069707  T
Q  130 attggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaataa 206  Q
    ||| |||||||||||||||| ||||||| || |||||||  |||||||||||||||||||||||||||||||||||||    
T  14069706 attagttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaataa 14069629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 30 - 206
Target Start/End: Complemental strand, 14379834 - 14379657
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgat 129  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||  || ||| ||||||||||||||     
T  14379834 tctccctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgtttactttgaa 14379735  T
Q  130 attggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaataa 206  Q
    ||| |||||||||||||||| ||||||| || |||||||  |||||||||||||||||||||||||||||||||||||    
T  14379734 attagttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaataa 14379657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 1113829 - 1114021
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||| ||||||||||| ||||||||| |      
T  1113829 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgtgtttttcattttgattcctagattagatctaggtgttattattgttgttat 1113928  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| |||||||||||||||||| ||||| |||||||||| ||||||| || |||||||  |||| |||||||||||| || ||||||||||||    
T  1113929 tgcttgtgtttactttgatattagttaccactttcctttgctccacacatcatagtttgtattgatgtgagttttgattcggaattcacaaca 1114021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 41649007 - 41648813
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |    
T  41649007 ttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgctattgttgtt 41648908  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
      ||| |||||| ||||||||||| |||||||||||||||| ||||||| || |||||||  |||||||||| |||||||||||||||||||||||    
T  41648907 attgcttgtgttcactttgatattagttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 41648813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 47676132 - 47675936
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| |||    
T  47676132 ttggtgtgtttgttcctctcttctctccatttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattg 47676033  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
     || ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||||||||| ||||||||||||||||    
T  47676032 ttgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgtgtccgaattcacaaca 47675936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 18126841 - 18127017
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||  |  ||| |||||| |||||||    
T  18126841 tctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattcttgattattgcttgtgttcactttga 18126940  T
Q  129 tattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    ||||| ||||||||||||||| ||||||| || |||||||  |||||||||||||||||||||||||||||||||||    
T  18126941 tattgattactactttcctttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaat 18127017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 36146404 - 36146211
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| |||||||||| ||| ||     
T  36146404 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggtttttagcttttcactttgattactagattagatctagatgttgttattattgttgt 36146305  T
Q  111 tgcctg-tgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    ||| || ||||| ||||||||||||||||||||||||||| ||||||| || |||||||  ||| |||| | |||||||||||||||||||||||    
T  36146304 tgcttgttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtatttgtgt-aattttgagtccgaattcacaacaa 36146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 19502351 - 19502547
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||||||||| || |||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||    
T  19502351 ttggtgtgtttgtttctctcttctctccctttattttgtgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattg 19502450  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
     || ||| ||| |||||||||| |||||||||||||||||||| ||||||| || |||||||  ||| |||||||||||||||| ||||||||||||    
T  19502451 ttgttgcttgtatttactttgaaattggttactactttcctttgctccacacatcatagtttgtattagtgtgagttttgagtctgaattcacaaca 19502547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 23344135 - 23344332
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||||||||||| ||||||||||||| |||||||| || |||| ||||||| | ||||||||||||||| |||||||||||||||| ||||||    
T  23344135 taaacatttcttggtgtgtatgtttctcttctctctttatctctttcttgcggttttgtgtttttcactttgattcgtagattaaatctaggttttgtta 23344234  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    |||||| ||||   |||| |||||| ||||||||||||||||||||||| ||||||| || ||||||| |||| ||||| ||||| ||| ||||||||||    
T  23344235 ttgttgttgct---tgtggttacttggatattggttactactttcctttgctccacacatcatagttttattgatgtga-ttttgggtctgaattcacaa 23344330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 23555217 - 23555411
Alignment:
Q  15 tgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctg 109  Q
    |||||||||||||||    ||||| ||||||||||||||||||| ||| | |||| |||||||||||||||||| |||||||||||||||||||||  |     
T  23555217 tgtgtttgtttctctcttctctccttttatcttttgcttgtggtattgtgttttttactttgattcctagattagatctaggtgttgttattgttgatta 23555316  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
     ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  ||||||||||||||||||||||||||||||||||    
T  23555317 ttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaa 23555411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 198
Target Start/End: Original strand, 43864417 - 43864609
Alignment:
Q  12 tggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg- 106  Q
    ||||||||||||| ||||    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||     
T  43864417 tggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttga 43864516  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcac 198  Q
     |  ||| |||||| |||||||||||| |||| |||||||||| ||||||| || |||||||  |||||||||||||||||||||||||||||    
T  43864517 ttattgcttgtgttcactttgatattgattaccactttcctttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcac 43864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 30 - 206
Target Start/End: Original strand, 4586356 - 4586534
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattg-ttgctgctgcctgtgtttactttga 128  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| ||  |  ||| |||||| |||||||    
T  4586356 tctccctttatcttttgtttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattgtttattattgcttgtgttcactttga 4586455  T
Q  129 tattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaataa 206  Q
     ||||||||| |||||||||| ||||||| || ||||||| |||||||||||| |||||||||||||||||||||||||    
T  4586456 aattggttaccactttcctttgctccacacatcatagtttacattggtgtgagatttgagtccgaattcacaacaataa 4586534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 8153514 - 8153705
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||| ||| ||     
T  8153514 ttggtgtgtttatttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattattagatcagatctaggtgttgttattattgttgt 8153613  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| |||| | |||||||||||| ||||||||||||||| ||||||  || |||||||  ||| |||||| |||||||||||||||| |||||    
T  8153614 tgcttgtgctcactttgatattgattactactttcctttgctccacgcatcatagtttgtattagtgtga-ttttgagtccgaattcccaaca 8153705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 47673940 - 47673743
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    |||||||||||||||||||||||||||||  ||||||||||||||| |||||||| ||||||||||||||||| |||    
T  47673940 ttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtacttttcactttgattactagattagatctaggtgttgttattattg 47673841  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
     || ||  |||||| |||||||||||||||||||||||| |||  |||||| || |||||||  |||||||||||||||| ||||||||||| |||||    
T  47673840 ttgttgtttgtgttcactttgatattggttactactttcttttgttccacacatcatagtttgtattggtgtgagttttgtgtccgaattcataacaa 47673743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 48489603 - 48489798
Alignment:
Q  11 ttggtgtgtttgtt--tctcttctc--cctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||||||||||||  |||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  48489603 ttggtgtgtttgttcctctcttctcgccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttg 48489702  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtt-tcattggtgtgagttttgagtccgaattcacaac 201  Q
      |  |||   |||| |||||||||||||||||||||||||||| ||||||| || ||||||   |||||||||| |||||||||||||||||||||    
T  48489703 attattgctcatgttcactttgatattggttactactttcctttgctccacacatcatagttggtattggtgtga-ttttgagtccgaattcacaac 48489798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 38671218 - 38671025
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||||||||||  |||| | ||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| ||| |||      
T  38671218 ttggtgtgtttgtttctctcttctctccttatcttttgcttgtggttttgagcttttcactttgattactagatttgatctaggtgttgtcattattgtc 38671119  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    | ||| |||||| |||||||| || ||||||| |||||||| ||||||| || |||||||  |||||||||| ||||||||||||||||||||||    
T  38671118 gttgcttgtgttcactttgatttttgttactattttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaaca 38671025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 31519065 - 31519258
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||        |||||||||||||||||||||||| |||||||||||||||    
T  31519065 taaacatttcttggtgtgtttgtttctcttctttctttatcttttgcttgtg--------cttttcactttgattcctagattagatctaggtgttgtta 31519156  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    || ||| |||||| | || |||| ||||||||  |||||| |||  ||| ||||||| ||  || ||||||||| ||||||||||||||| |||||||||    
T  31519157 ttattgttgctgcttatgattacattgatattaattactatttttatttgctccacacatcttattttcattggcgtgagttttgagtccaaattcacaa 31519256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 48491754 - 48491944
Alignment:
Q  15 tgtgtttgtttctcttctc--cctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgct 111  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||| |||||||||||||  |  |    
T  48491754 tgtgtttgttcctcttctctccctttatcttttgcttgtggttttgtgcttttcattttgattcctatattagatctaggcgttgttattgttgattatt 48491853  T
Q  112 gcctgtgtttactttgatattggttactactttccttttctccacaaattatagtt-tcattggtgtgagttttgagtccgaattcacaaca 202  Q
    || |||||| |||||||||||||||||||||||||||| |||| || |||||||||   |||||||||| |||||| |||||||||||||||    
T  48491854 gcttgtgttcactttgatattggttactactttcctttactccgcacattatagttggtattggtgtga-ttttgaatccgaattcacaaca 48491944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 495979 - 495833
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||| ||||| |||||||| ||||||||| ||||    ||||||||||||||||||||||| ||||||||||||||||||||| |      
T  495979 ttggtgtgtttgtttcttttctctctttatctcttgcttgtgattttctatttttcactttgattcctagattagatctaggtgttgttattgttgttat 495880  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccaca 157  Q
    ||  ||||||||||||||||||||||||||||||||||| |||||||    
T  495879 tgtttgtgtttactttgatattggttactactttcctttgctccaca 495833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 24525498 - 24525340
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||| ||| ||     
T  24525498 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactaaatttgatctaggtgttgttattattgttgt 24525399  T
Q  111 tgcctg-tgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
    ||| || ||||| ||||||||||| |||||||||| |||| || |||| || |||||||    
T  24525398 tgcttgttgtttgctttgatattgattactacttttctttgctacacatatcatagttt 24525340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 25616026 - 25616223
Alignment:
Q  11 ttggtgtgtttgtttctct-----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgtt 105  Q
    |||||||||||||||||||     |||| ||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  25616026 ttggtgtgtttgtttctctcttcttctctctttatcttgtgcttgtggttttgtgcttttcacttcgattcctagattagatctaggtgttgttattgtt 25616125  T
Q  106 g-ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    |  |  ||| |||||| |||||||||||||||||||||||||||| ||||| | || |||||||  |||||||||| |||||||| || ||||||||||    
T  25616126 gattattgcttgtgttcactttgatattggttactactttcctttgctccatacatcatagtttgtattggtgtga-ttttgagtacgtattcacaaca 25616223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 202
Target Start/End: Complemental strand, 31732942 - 31732768
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||   |||||||||||||  |  ||| |||||| |||||||    
T  31732942 tctccctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaaaggttgttattgttgattattgcttgtgttcactttga 31732843  T
Q  129 tattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
     |||||||||||||||| ||| ||||||| || |||||||  | |||||||||||||||||||||||||||||||    
T  31732842 aattggttactactttcatttgctccacacatcatagtttgtactggtgtgagttttgagtccgaattcacaaca 31732768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 36574522 - 36574323
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||| | ||||||| ||||||||||||||| ||||| || ||||||    
T  36574522 taaacatttcttgatgtgtttgtttttcttctctctttatctttttcttgtggttttgtgtttttcac-ttgattcctagattagatctaagt-ttgtta 36574425  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    |||||| ||  ||||| | |||||||||||||||||| || ||||||||  |||||| ||   ||||| |||||||||||  ||||||| ||||||||||    
T  36574424 ttgttgttgtggcctgagattactttgatattggttaatattttcctttgatccacacatctaagttt-attggtgtgagaattgagtctgaattcacaa 36574326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 27347989 - 27348186
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    |||| |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||||||||||    
T  27347989 ttggtgtgtttgttcctctcttctctcactttatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttg 27348088  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
      |  ||  |||||| ||||||||||||||| |||||||||||| ||||||| || ||| |||  ||| |||||| |||||||||||||||||||||||    
T  27348089 attattgtttgtgttcactttgatattggttgctactttcctttgctccacacatcataatttgtatttgtgtga-ttttgagtccgaattcacaacaa 27348186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 23565064 - 23564914
Alignment:
Q  5 catttcttggtgtgtttgtttctcttctccctttatcttttgcttgtgg-ttttgagcttttcactttgattcctagattaaatctaggtgttgttattg 103  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||| | |||||||||||||| |||||||| |||||||| |||||||||    
T  23565064 catttcttggtgtgtttgtttctcttctctatttatcttttgcttgtggtttttgtgattttcactttgatttctagattagatctaggttttgttattg 23564965  T
Q  104 ttgctgctgcctgtgtttactttgatattggttactactttccttttctccaca 157  Q
    ||| ||||   |||| |||||||||||||||| |||||||| |||  |||||||    
T  23564964 ttgttgct---tgtggttactttgatattggtcactacttttcttcactccaca 23564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 30024714 - 30024610
Alignment:
Q  45 tgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgatattggttactacttt 144  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| ||| || ||| |||||||||||||| |||||||||||||||    
T  30024714 tgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggttactacttt 30024615  T
Q  145 ccttt 149  Q
    |||||    
T  30024614 ccttt 30024610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 12097863 - 12097790
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagatta 84  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12097863 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagatta 12097790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 168
Target Start/End: Original strand, 29991226 - 29991387
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||| | ||||||| |||||||||||| |||| |||||||||||||||||||||    
T  29991226 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctatattagatctaggtgttgttattgttg 29991324  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      |  | | |||| | ||||||||||||||||||||||| |||| ||||||| || |||||||    
T  29991325 attattacttgtgctcactttgatattggttactacttttctttgctccacacatcatagttt 29991387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 35854086 - 35854250
Alignment:
Q  9 tcttggtgtgtttgtttctct----tctcccttt-atcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattg 103  Q
    |||||||||||||||||||||    ||||||||| ||||| |||||||| ||||  ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  35854086 tcttggtgtgtttgtttctctcttctctcccttttatcttgtgcttgtg-ttttatgcttttcactttgcttcctagattagatctaggtgctgttattg 35854184  T
Q  104 ttg-ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
    |||  |  ||  |||||| |||||||||||||||||||||||||||| ||||||| || |||||||    
T  35854185 ttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcatagttt 35854250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 4253534 - 4253335
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||||||||||||||||||||||| | ||||||| |||||||||| |||||  |||||| | |||||| ||| |||| |||||||| || |||    
T  4253534 taaacatttcttggtgtgtttgtttctcttcactctttatcgtttgcttgtgcttttgtacttttcgc-ttgatttctatattagatctaggt-ttttta 4253437  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgag-ttttgagtccgaattcaca 199  Q
    || ||| || |||||| | |||||||||||||||||| ||||||| ||| || |||| ||   ||||| ||||||||||| |||||||| | |||| |||    
T  4253436 ttattgttgttgcctgaggttactttgatattggttaatactttcttttgctacacacatctaagttt-attggtgtgagattttgagttcaaatttaca 4253338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 168
Target Start/End: Original strand, 4178946 - 4179107
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||| ||||||||||||||| | | ||||||||||||||||||||||| ||||||||| |||||||||||    
T  4178946 ttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgtttttcactttgattcctagattagatctaggtgctgttattgttg 4179044  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      |  ||| |   || |||||| ||||||||||||||||||||| ||||||| || |||||||    
T  4179045 attattgcttacattcactttgttattggttactactttcctttgctccacacatcatagttt 4179107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 40808750 - 40808897
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    |||| |||| ||||||||||||||||| ||||| || ||||||||||||||||||||| | ||| ||| |||  |||||||||||| ||||||  |||||    
T  40808750 taaatattttttggtgtgtttgtttcttttctctctatatcttttgcttgtggttttgtgttttacac-ttgggtcctagattaaacctaggt-ctgtta 40808847  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttcctttt 150  Q
    || ||| || ||| || |  |||||||||||| |||||||||||||||||    
T  40808848 ttattgttgttgcttgagaatactttgatatttgttactactttcctttt 40808897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 48408973 - 48409130
Alignment:
Q  6 atttcttggtgtgtttgtttctct----tctcccttt-atctttt-gcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtt 99  Q
    ||||||||||||||||||||||||    ||||||||| ||||||| ||||||| ||| | ||||||||||||||| ||||||||| ||||||||| ||||    
T  48408973 atttcttggtgtgtttgtttctctcttctctcccttttatctttttgcttgtgattt-gtgcttttcactttgatacctagattagatctaggtgctgtt 48409071  T
Q  100 attgttg-ctgctgcctgtgtttactttgatattggttactactttccttttctccaca 157  Q
    |||||||  |  ||| ||   | |||||| ||||||||||||||||||||| |||||||    
T  48409072 attgttgattattgcttgcactcactttgttattggttactactttcctttgctccaca 48409130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 39731567 - 39731642
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||| |||||||| |||||||||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  39731567 tctccttttatcttgtgcttgtggttt-gtgcttttcactttgtttcctagattagatctaggtgttgttattgttg 39731642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 12097081 - 12096962
Alignment:
Q  86 atctaggtgttgttattgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttg 185  Q
    |||||||||||||| || ||| || ||  |||||| ||||||||||||||||||||||||||||  ||||   || |||||||   |||||||| |||||    
T  12097081 atctaggtgttgttgttattgttgttgattgtgttcactttgatattggttactactttcctttattccaagcatcatagtttatatggtgtga-ttttg 12096983  T
Q  186 agtccgaattcacaacaataa 206  Q
    |||||||||||||| ||||||    
T  12096982 agtccgaattcacagcaataa 12096962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 25766956 - 25766802
Alignment:
Q  9 tcttggtgtgtttgtttctct----tctcccttt-atctttt-gcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttatt 102  Q
    |||||||||||||||||||||    ||||||||| ||||||| ||||||| ||| | | ||||||||||||| ||||||||| ||||||||| |||||||    
T  25766956 tcttggtgtgtttgtttctctattctctcccttttatctttttgcttgtgattt-gtgtttttcactttgatacctagattagatctaggtgctgttatt 25766858  T
Q  103 gttg-ctgctgcctgtgtttactttgatattggttactactttccttttctccaca 157  Q
    ||||  |  ||| || | | |||||| |||||||||||||||| |||| |||||||    
T  25766857 gttgattattgcttgcgctcactttgttattggttactacttttctttgctccaca 25766802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3904473 - 3904418
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttt 56  Q
    ||||||||||||||| |||||||||||||| |  |||||||||||| |||||||||    
T  3904473 taaacatttcttggtatgtttgtttctcttatatctttatcttttggttgtggttt 3904418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 6430464 - 6430498
Alignment:
Q  170 attggtgtgagttttgagtccgaattcacaacaat 204  Q
    |||||||||||||||||||||||||||||||||||    
T  6430464 attggtgtgagttttgagtccgaattcacaacaat 6430498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 43504123 - 43504058
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgtt 96  Q
    ||||| |||||||| |||||||| ||||  ||||||||||||||||||||||||| |||||| ||||    
T  43504123 tctccttttatcttgtgcttgtg-ttttatgcttttcactttgattcctagattagatctagctgtt 43504058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 2759193 - 2759127
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttga 73  Q
    ||||||||||| |||||||    |||||||||||||||||||| |||||||| |||||| |||||||    
T  2759193 ttggtgtgtttctttctctcttctctccctttatcttttgcttatggttttgtgcttttaactttga 2759127  T

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Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 26639495 - 26639544
Alignment:
Q  8 ttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggtttt 57  Q
    ||||||||| ||||||||||||| || ||||| |||||||||||||||||    
T  26639495 ttcttggtgcgtttgtttctcttatctctttaccttttgcttgtggtttt 26639544  T

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Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 18396488 - 18396563
Alignment:
Q  17 tgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggt 93  Q
    ||||||||||||||||| ||||| ||| | |||||| ||||||| ||||  | ||| ||||||||||||||||||||    
T  18396488 tgtttgtttctcttctctctttaccttctacttgtgattttgag-ttttacccttggttcctagattaaatctaggt 18396563  T

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Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 30843367 - 30843286
Alignment:
Q  120 ttactttgatattggttactactttcctttt-ctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||||||||||||||||||||||||||||||| |||||| | || ||  || |||||||||| |||||| || ||||||||||||    
T  30843367 ttactttgatattggttactactttccttttgctccac-acttctaagtttattggtgtga-ttttgattctgaattcacaaca 30843286  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 3826208 - 3826176
Alignment:
Q  170 attggtgtgagttttgagtccgaattcacaaca 202  Q
    ||||||||||||| |||||||||||||||||||    
T  3826208 attggtgtgagttctgagtccgaattcacaaca 3826176  T

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Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 21351004 - 21350811
Alignment:
Q  6 atttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgtt 105  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  21351004 atttcttggtgtgtttgtttctcttctcactttatcttatgcttgtggttatgagcttttcactttgattcctagattagatctaagtgttgttattgtt 21350905  T
Q  106 gctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaaca 202  Q
    | || |   ||||||||||||||||||||||||||||||||||| || |||| ||  |  |||||||||||||||||||||||||||||||||||||    
T  21350904 gttgtt---tgtgtttactttgatattggttactactttcctttgcttcacacatctttatttcattggtgtgagttttgagtccgaattcacaaca 21350811  T

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Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 39153348 - 39153162
Alignment:
Q  19 tttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtg 118  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| || ||||    
T  39153348 tttgtttctcttctccctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgctgccgcttgtg 39153249  T
Q  119 tttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    |||||||||| |||||||||||||||||||| ||||||| || |||||||  |||||||||||||||||| |||||||| |||||||    
T  39153248 tttactttgaaattggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagcccgaattctcaacaat 39153162  T

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Target: chr3; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 22834999 - 22834805
Alignment:
Q  11 ttggtgtgtttg-tttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctg 109  Q
    |||||||||||  |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |     
T  22834999 ttggtgtgttttctttctcttcttcctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgtta 22834900  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
     | ||||||||||||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||||||||||||||||||    
T  22834899 ttacctgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaat 22834805  T

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Target: chr3; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 29196382 - 29196188
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| ||| ||     
T  29196382 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattaccagattagatctaggtgttgttattattgttgt 29196283  T
Q  111 tgcctg-tgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    ||| || ||||| ||||||||||||||||||||||||||| ||||||| || |||||||  ||||||||||| ||||||||||||||||||||||    
T  29196282 tgcttgttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagatttgagtccgaattcacaacaa 29196188  T

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Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 32891270 - 32891460
Alignment:
Q  5 catttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgt 104  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||   ||||    
T  32891270 catttcttggtgtgtttgtttctcttctctccttatcttttgcttgtggttttgagtttttcactttgattcctatattagatctaggtgttg---ttgt 32891366  T
Q  105 tgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaacaat 204  Q
    ||||      |||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  32891367 tgct------tgtgtttactttaatattggttactactttcctttgctccacacatcatagtttcattggtgtgagttttgagtccgaagtcacaacaat 32891460  T

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Target: chr3; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 51352139 - 51351940
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| | |||||| |||||||||||||||| |||||||| ||||||    
T  51352139 taaacatttcttgatgtgtttgtttctcttctctctttatcttttacttgtggttttgtgtttttca-tttgattcctagattagatctaggt-ttgtta 51352042  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    ||||||||||||| |||| ||||||||||||||||||| |||||||||| ||||||| ||  |||| | |||| ||||| ||||||||||||||||||||    
T  51352041 ttgttgctgctgcttgtgattactttgatattggttaccactttcctttgctccacacatcgtagtattattgatgtga-ttttgagtccgaattcacaa 51351943  T

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Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 23391905 - 23391710
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagctttt-cactttgattcctagattaaatctaggtgttgttattgttgctg 109  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||||||| |||||||| ||||||||||||||||| ||| ||    
T  23391905 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgtgttttttcactttgattactagattagatctaggtgttgttattattgttg 23391806  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
     | | |||||| |||||||||||||||| ||||||||||||||||||| || |||||||  |||||||||||||||| || |||||||||||||||    
T  23391805 tttcttgtgttcactttgatattggttattactttccttttctccacacatcatagtttgtattggtgtgagttttgtgttcgaattcacaacaat 23391710  T

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Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 9666462 - 9666270
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||  |     
T  9666462 ttggtgtgtttgtttctcttatctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgtagt 9666363  T
Q  111 tgcctg-tgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| || | ||| ||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||||||||||||||||    
T  9666362 tgcttgttatttgctttgatattggttactactttcctttgctccacagatcatagtttgtattggtgtga-ttttgagtccgaattcacaaca 9666270  T

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Target: chr3; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 31314617 - 31314811
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||| ||     
T  31314617 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattatatttaggtgttgttattattgttgt 31314716  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaata 205  Q
    ||| |||||||||||| ||||| |||| ||||||||||| ||||| | || |||||||  |||||||||| ||||||||| | |||||||||||||    
T  31314717 tgcttgtgtttactttaatattagttattactttcctttgctccatacatcatagtttgtattggtgtga-ttttgagtcggtattcacaacaata 31314811  T

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Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 44700472 - 44700283
Alignment:
Q  14 gtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgc 113  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||| || |||    
T  44700472 gtgtgtttgtttctcttctctctttatcctttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgc 44700373  T
Q  114 ctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
     |||||||||||||||||||||||||||||| |||| |||||   || |||||||  |||||||||| ||||||||||||||||| |||||    
T  44700372 ttgtgtttactttgatattggttactacttttctttgctccatgcatcatagtttgtattggtgtga-ttttgagtccgaattcaaaacaa 44700283  T

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Target: chr3; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 761019 - 761212
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |    
T  761019 ttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgctattgttgtt 761118  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
      ||| || ||| |||||||| ||||||||||||||||||| ||||||| || |||||||  ||||||||||  ||||||||||||||||||||||    
T  761119 attgcttgagttcactttgattttggttactactttcctttgctccacacatcatagtttgtattggtgtga--tttgagtccgaattcacaacaa 761212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 29811040 - 29811239
Alignment:
Q  11 ttggtgtgtttgtt--tctcttctc--cctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||||||||||||  |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  29811040 ttggtgtgtttgttcatctcttctctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgttattgttg 29811139  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
      |  ||| ||||||  |||||| |||||||||||||||||||| |||||||||| ||| |||  ||||||||||||||||||| |||||||||||||||    
T  29811140 attattgcttgtgttctctttgaaattggttactactttcctttgctccacaaatcatattttgtattggtgtgagttttgagttcgaattcacaacaat 29811239  T

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Target: chr3; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 2075081 - 2074883
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||| | ||||||| ||| |||||||||||||||| ||| || |||    
T  2075081 taaacatttctgggtgtgtttatttctcttctctctttatcttttgcttgtggttttgtgtttttcac-ttgtttcctagattaaatctgggt-ttatta 2074984  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    |||||  || ||| |||| ||| |||||||||||||||||||||||||| ||||||| || ||||||| |||||||||| ||||| ||||||||||||||    
T  2074983 ttgttattgttgcttgtggttattttgatattggttactactttcctttgctccacacatcatagttttattggtgtga-ttttgggtccgaattcacaa 2074885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 29813239 - 29813431
Alignment:
Q  15 tgtgtttgtt--tctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgct 111  Q
    ||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||  |  |    
T  29813239 tgtgtttgttcctctcttctccctttatcttttggttgtggttttgagcttttcactttgattcttagattagatctaggtgctgttattgttgattatt 29813338  T
Q  112 gcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    |  |||||| ||||||||||| ||||||||||| |||| ||||||| || |||||||  ||||||||||||||||||||||||||||||||||    
T  29813339 gtttgtgttcactttgatattagttactacttttctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaa 29813431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 202
Target Start/End: Complemental strand, 27305713 - 27305519
Alignment:
Q  4 acatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattg 103  Q
    ||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||| | |||||||||| | |||||||||| |||||||| | |||||||    
T  27305713 acatttctttgtgtgtttgtttctcttctctatttatcttttgtttgtggttttgtgtttttcacttt-actcctagattagatctaggt-tggttattg 27305616  T
Q  104 ttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| || ||| |||  |||||||||||||||||||||||||||||| ||||||| || ||||||| |||||||||| ||||||||||||||||||||||    
T  27305615 ttgttgttgcttgttgttactttgatattggttactactttcctttgctccacacatcatagttt-attggtgtga-ttttgagtccgaattcacaaca 27305519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 204
Target Start/End: Original strand, 7762442 - 7762637
Alignment:
Q  15 tgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctg 109  Q
    |||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||  |     
T  7762442 tgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgatta 7762541  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaacaat 204  Q
     | | |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||| |||||||||||| ||||| ||||||||    
T  7762542 ttacttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt-agttttgagtcctgaattgacaacaat 7762637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 7764637 - 7764834
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| ||||||||| |||||||||||    
T  7764637 ttggtgtgtttgtttctctcttctctccttttatcttttgtttgtggttttgtgcttttcactttgattccaagattagatctaggtgctgttattgttg 7764736  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaaca 202  Q
      |  ||| |||||| |||||||||||||||||||||||||||| || |||| || |||||||  |||||||| |||||||||||| ||||||||||||    
T  7764737 attattgcttgtgttcactttgatattggttactactttcctttacttcacacatcatagtttgtattggtgt-agttttgagtccggaattcacaaca 7764834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 23410325 - 23410129
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttc--actttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    ||||||||||||||| | ||||| |||||||||||||||||||||||||| ||||   ||||||||| |||||||| ||||||||||||||| | ||  |    
T  23410325 ttggtgtgtttgtttatattctctctttatcttttgcttgtggttttgagttttttttactttgattactagattagatctaggtgttgttaatattttt 23410226  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    | ||| |||||| ||||||||||  ||||||||||||||||  |||||| || |||||||  |||| ||||||||||| ||||||||||||||||||    
T  23410225 gttgcttgtgttcactttgatatatgttactactttcctttgatccacacatcatagtttgtattgatgtgagttttgtgtccgaattcacaacaat 23410129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 19683884 - 19683684
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||| |||||||||||    
T  19683884 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgtttttcacttttattcctagattagatctaggtgctgttattgttg 19683785  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaacaa 203  Q
      |  ||| |||||| |||||||||||||||||||||||||||| ||||| | || |||||||  ||||||||||| |||||| || |||||||||||||    
T  19683784 attattgcttgtgttcactttgatattggttactactttcctttgctccaaacatcatagtttgtattggtgtgag-tttgagaccggaattcacaacaa 19683686  T
Q  204 ta 205  Q
    ||    
T  19683685 ta 19683684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 29682531 - 29682726
Alignment:
Q  11 ttggtgtgtttgtttctc--ttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| || |||||||| |    
T  29682531 ttggtgtgtatgtttctctcttctccctttatcttttgcttgtggttttgagtttttcactttgattcctaggttagatctaggtgctgctattgttgtt 29682630  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtga-gttttgagtccgaattcacaaca 202  Q
      ||| ||| || ||||| || ||| ||||||||||||||| ||||||| || |||||||  ||||||||||  ||||| ||| ||||||||||||    
T  29682631 attgcttgtattcactttaattttgattactactttcctttgctccacacatcatagtttgtattggtgtgattttttgtgtcggaattcacaaca 29682726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 51398986 - 51399186
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    |||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||| |||||||||||    
T  51398986 ttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtacttttcactttgattcctagattagatctaggtgctgttattgttg 51399085  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
      |  |||  ||| | |||||||||||| || |||||||||||| ||||| | || |||||||  |||||| ||| ||||||||||||||||||||||||    
T  51399086 attattgctagtgctcactttgatattgttttctactttcctttgctccatacatcatagtttgtattggtatga-ttttgagtccgaattcacaacaat 51399184  T
Q  205 aa 206  Q
    ||    
T  51399185 aa 51399186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 40734670 - 40734867
Alignment:
Q  11 ttggtgtgtttgtt--tctcttctc-cctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta-ttgttg 106  Q
    |||| |||||||||  ||||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||| ||||| || ||     
T  40734670 ttggagtgtttgttcctctcttctctcctttatcttttgcttgtggatttgtgctttgcactttgattcctagattagatctaggtgctgttatttttta 40734769  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
     |  | | |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||| ||||||||||||||||    
T  40734770 ttatttcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagaccgaattcacaacaat 40734867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 5236453 - 5236256
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| | | |||||||||    
T  5236453 ttggtgtgtttgttcctctcttctctccttttatcttttgcttgtggatttgtgcttttcactttgattcctagattagatctaggagctcttattgttg 5236354  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
      |  ||| |||||| |||||||||| | ||||||||||||| | ||||||| || |||||||  |||||||||| |||||||||||||||||||||||    
T  5236353 attattgcttgtgttcactttgatatcgattactactttcctgtactccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 5236256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 9581459 - 9581652
Alignment:
Q  15 tgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctg 109  Q
    |||||||||||||||    ||||||||||| || |||||||||||||| ||||||||||||||||| ||||||| ||||||||| |||||||||||  |     
T  9581459 tgtgtttgtttctctcttctctccctttattttgtgcttgtggttttgtgcttttcactttgattcatagattagatctaggtgctgttattgttgatta 9581558  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaaca 202  Q
     ||| |||| | |||||||||||||||||||||||||||| || |||| || |||||||  |||||||||| |||||||||| ||||||||||||    
T  9581559 ttgcttgtgctcactttgatattggttactactttcctttgcttcacacatcatagtttatattggtgtga-ttttgagtccggaattcacaaca 9581652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 168
Target Start/End: Original strand, 16499201 - 16499348
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||| || |||||||||||||             
T  16499201 ttggtgtatttgtttctcttctctctttatcttttgcttgtggttttgtacttttca-tttgattcctagattagatttaggtgttgttat--------- 16499290  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
    ||| ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  16499291 tgcttgtgtttactttgatgttggttactactttcctttgctccacacattatagttt 16499348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 40735555 - 40735760
Alignment:
Q  11 ttggtgtgtttgtt--tctcttctc-cctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg- 106  Q
    ||||||| ||||||  ||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||| ||||||||| |||||||||||     
T  40735555 ttggtgtatttgttcctctcttctctcctttatcttttgcttgtggatttgtgcttttcactttggttcctatattagatctaggtgctgttattgttga 40735654  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaata 205  Q
     |  ||  |||||| |||||||||||||||||||||||||||| ||||||| || ||| |||  |||||||||| ||||||  ||||||||||||||| |    
T  40735655 ttattgtttgtgttcactttgatattggttactactttcctttgctccacacatcataatttgtattggtgtga-ttttgataccgaattcacaacaa-a 40735752  T
Q  206 acatatat 213  Q
    ||||||||    
T  40735753 acatatat 40735760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 9636122 - 9635921
Alignment:
Q  9 tcttggtgtgtttgtttctct----tctcccttt-atcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattg 103  Q
    |||||||||||||||||||||    ||||||||| ||||| |||||||| |||   ||||||||||||||||||||||||| ||||||||| ||||||||    
T  9636122 tcttggtgtgtttgtttctctctgctctcccttttatcttgtgcttgtgatttat-gcttttcactttgattcctagattagatctaggtgctgttattg 9636024  T
Q  104 ttg-ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaa 200  Q
    |||  |  ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||| || ||||||||||    
T  9636023 ttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagaccggaattcacaa 9635925  T
Q  201 caat 204  Q
    ||||    
T  9635924 caat 9635921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 37408631 - 37408827
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  37408631 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtgatttagtgcttttcactttgattcctagattagatctaggtgctgttattgttg 37408730  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
      |  ||  |||| | ||||| |||||||||||||||||||||| ||||||| || ||| |||  |||| |||||  |||||| ||||||||||||||    
T  37408731 attattgtttgtgctcactttaatattggttactactttcctttgctccacacatcatattttgtattgatgtga-ctttgaggccgaattcacaaca 37408827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 53921509 - 53921426
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagatta 84  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  53921509 taaacatttcttagtgtgtttgtttctcttctctctttatattttgtttgtggttttgagcttttcactttgattcctagatta 53921426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 5258139 - 5257979
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  5258139 ttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttg 5258041  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtt 167  Q
      |  ||| ||  || |||||| ||||||||||||||||||||| ||||||| || ||||||    
T  5258040 attattgcttgcattcactttgttattggttactactttcctttgctccacacatcatagtt 5257979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 9634764 - 9634621
Alignment:
Q  60 gcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttgatattggttactactttccttttctccacaa 158  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||  |  ||| |||||| |||||||||||||||||||||||||||| |||||| |    
T  9634764 gcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccac-a 9634666  T
Q  159 attatagttt-cattggtgtgagttttgagtcc-gaattcacaaca 202  Q
    || |||||||  |||||||||| ||||||| || ||||||||||||    
T  9634665 atcatagtttgtattggtgtga-ttttgagaccggaattcacaaca 9634621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 5260318 - 5260158
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||| ||||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||    
T  5260318 ttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgcttttcactttgattcctaaattagatctaggtgttgttattgttg 5260220  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtt 167  Q
      |  ||| ||   | |||||| ||||||||||||||||||||| ||||||| || ||||||    
T  5260219 attattgcttgcactcactttgttattggttactactttcctttgctccacacatcatagtt 5260158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 45095359 - 45095497
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||| |||||||||||||||||| |||| | ||| | ||||||||| ||||||| ||||| ||| |||||||||||  |  ||| |||| | |||||||    
T  45095359 tctccttttatcttttgcttgtgg-tttgtgttttactctttgattcatagattagatctatgtgctgttattgttgattattgcttgtgctcactttga 45095457  T
Q  129 tattggttactactttccttttctccacaaattatagttt 168  Q
    ||||||||||||||||||||| ||| ||| || |||||||    
T  45095458 tattggttactactttcctttgctctacacatcatagttt 45095497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 32744432 - 32744349
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttat 101  Q
    |||||||||||||||||| | || ||||||||||||||||||||       |||||||||||||| |||||||| ||||||||||||||||    
T  32744432 ttggtgtgtttgtttctcatatctctttatcttttgcttgtggt-------ttttcactttgatttctagattagatctaggtgttgttat 32744349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33191993 - 33192056
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttt 64  Q
    ||||||||| ||||||||||||||||| |||||  ||||||||||| ||||||||||| |||||    
T  33191993 taaacattttttggtgtgtttgtttcttttctcgatttatcttttgtttgtggttttgtgcttt 33192056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 2020323 - 2020467
Alignment:
Q  2 aaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttat 101  Q
    ||||| ||||| |||||||||||||  ||||| ||||||||| |||||||| ||||| ||||||    ||| |||||||||||||||||| | | |||||    
T  2020323 aaacaattcttagtgtgtttgtttcaattctctctttatcttctgcttgtgattttgcgcttttatacttggttcctagattaaatctagat-tggttat 2020421  T
Q  102 tgttgctgctgcctgtgtttactttgatattggttactactttcctttt 150  Q
    ||||| ||||    | |  ||||||||||| ||||||||||||| ||||    
T  2020422 tgttgttgct---cgaggctactttgatatcggttactactttcatttt 2020467  T

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Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 23200108 - 23199982
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||| |||||||| |||||||||||| | | |||||| |||| ||||||||||| ||||||||||| |||||||||  |  ||| ||   | ||||||     
T  23200108 tctccttttatcttatgcttgtggttt-gtgtttttcattttgtttcctagattagatctaggtgtt-ttattgttgattattgcttgcactcactttgt 23200011  T
Q  129 tattggttactactttccttttctccaca 157  Q
    ||||||||||||||||||||| |||||||    
T  23200010 tattggttactactttcctttgctccaca 23199982  T

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Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 4160091 - 4160057
Alignment:
Q  170 attggtgtgagttttgagtccgaattcacaacaat 204  Q
    |||||||||||||||||||||||||||||||||||    
T  4160091 attggtgtgagttttgagtccgaattcacaacaat 4160057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 44330955 - 44330987
Alignment:
Q  172 tggtgtgagttttgagtccgaattcacaacaat 204  Q
    |||||||||||||||||||||||||||||||||    
T  44330955 tggtgtgagttttgagtccgaattcacaacaat 44330987  T

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Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 37406981 - 37407059
Alignment:
Q  126 tgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    |||||||||||||||||||||||| ||||||| || ||| |||  | ||||||||  |||||| ||||||||||||||||    
T  37406981 tgatattggttactactttcctttgctccacacatcatattttgtagtggtgtga-ctttgaggccgaattcacaacaat 37407059  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 23197909 - 23197835
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||| |||||||| |||||||||||| | | |||||| |||| ||||||||||| ||||| ||||| |||||||||    
T  23197909 tctccttttatcttgtgcttgtggttt-gtgtttttcattttgtttcctagattagatctatgtgtt-ttattgttg 23197835  T

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Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 202
Target Start/End: Original strand, 39285012 - 39285202
Alignment:
Q  12 tggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgct 111  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| || |    
T  39285012 tggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgtt 39285111  T
Q  112 gcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaaca 202  Q
    || |||||||||||||| ||||||||||||||| |||| ||||||| || ||||||  |||||| |||||||| |||||||||||||||||    
T  39285112 gcttgtgtttactttgaaattggttactacttttctttgctccacacatcatagttgtattggtatgagttttaagtccgaattcacaaca 39285202  T

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Target: chr2; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 2838132 - 2838316
Alignment:
Q  21 tgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtt 120  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||  ||||||    
T  2838132 tgtttctcttctcactttatcttttgcttgtggttttgagcttttcactttgattcctagattatatctaggtgttgttattgttgttgttgtttgtgtt 2838231  T
Q  121 tactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaacaata 205  Q
    |||||||||| |||||||||||||||||| ||||||| || | ||| | |||||||||||||||| ||||||| |||||||||||    
T  2838232 tactttgatagtggttactactttcctttactccacacatcaaagtattattggtgtgagttttgtgtccgaactcacaacaata 2838316  T

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Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 723740 - 723545
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| |    
T  723740 ttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgtt 723641  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    | ||  |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||||||||||||||||||    
T  723640 gttgattgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaat 723545  T

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Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 34139766 - 34139572
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| ||| |    
T  34139766 ttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtcttgttattattgtt 34139667  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    | ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| |||||||||||||||||||||||    
T  34139666 gttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 34139572  T

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Target: chr2; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 36318005 - 36317810
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||     
T  36318005 ttggtgtgtttgtttatcttctttctttatcttttgcttgtggttttgtgcttttcactttgattactagattaaatctaggtgttgttattattgctgt 36317906  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaata 205  Q
    ||| |||||||||||||| |||||||||||||||| |||  || ||| || || ||||  ||||||||||||||||||||| ||||||||||||||    
T  36317905 tgcttgtgtttactttgaaattggttactactttcatttgttctacacatcattgtttgtattggtgtgagttttgagtccaaattcacaacaata 36317810  T

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Target: chr2; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 168
Target Start/End: Original strand, 11067477 - 11067634
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||     
T  11067477 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgt 11067576  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
    ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||    
T  11067577 tgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagttt 11067634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 33162446 - 33162254
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||     
T  33162446 ttggtgtgtttgtttctcttctctatttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgt 33162347  T
Q  111 tgcctg-tgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| || ||||| ||||||||||||||||||||||||||| ||||||| || |||||||  |||| ||||| ||||||||||||||||||||||    
T  33162346 tgcttgttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtattgatgtga-ttttgagtccgaattcacaaca 33162254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 11151587 - 11151395
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| |||||||||| ||| ||     
T  11151587 ttggtgtgtttgtttctcttctctctttatcttttgtttgtggttttgagcttttcactttgattactagattagatctagctgttgttattattgttgt 11151488  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| |||||| |||||||||||| ||||||||||  ||| ||||||| || |||||||  |||||| |||||||||||| |||||||||||||    
T  11151487 tgcttgtgttcactttgatattgattactacttttatttgctccacacatcatagtttgtattggtatgagttttgagttcgaattcacaaca 11151395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 42362520 - 42362713
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||| |    
T  42362520 ttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgtt 42362619  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    | ||| || ||| |||||||| ||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||||||||||||||||    
T  42362620 gttgcttgagttcactttgattttggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaaca 42362713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 24885761 - 24885953
Alignment:
Q  11 ttggtgtgttt-gtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctg 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||  ||| ||    
T  24885761 ttggtgtgttttgtttctcttctccctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttatcattgttg 24885860  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
     | | |||||| ||||||||||||||||||| |||||||| || |||| || |||||||  |||||||||| ||||||||||||||||||||||    
T  24885861 tttcttgtgttcactttgatattggttactattttcctttgctacacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaaca 24885953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 36988071 - 36987874
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  36988071 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggctttgtgcttttcactttgattcctagattagatctaggtgttgttattgttg 36987972  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
      |  ||| |||||||||||||| |||||||||||||||||||| ||||||| || |||||||  |||||||||| |||||||||||||||||||||||    
T  36987971 attattgcttgtgtttactttgaaattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 36987874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 14633821 - 14633627
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| |    
T  14633821 ttggtgtgtttgtttctctattctctctttatcttttgattgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgtt 14633722  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    | ||| |||||| |||||||||||||||||||||||||||| || |||| || |||||||  |||||||||| ||||||||| ||| |||||||||    
T  14633721 gttgcttgtgttcactttgatattggttactactttcctttgcttcacacatcatagtttgtattggtgtga-ttttgagtctgaaatcacaacaa 14633627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 11690673 - 11690858
Alignment:
Q  11 ttggtgtgttt-gtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctg 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||            
T  11690673 ttggtgtgttttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttaattcctagattagatctaggtgttgttat-------- 11690764  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
     ||| |||||| || |||||||| |||||||||||||||| ||||||| || |||||||  |||||||||||||||||||||||||||||||||||    
T  11690765 -tgcttgtgttcac-ttgatattagttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaat 11690858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11049716 - 11049913
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||| || |||    
T  11049716 taaacatttctttgtgtgtttgtttctcttctctctttatattttgcttgtggttttgtacttttcactttgattcctagattagatctaggt-ttatta 11049814  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    |||||| ||||   | || |||||||||||||||||||||||||| ||| ||||||  || ||||||| |||||||||| ||||| ||||||| ||||||    
T  11049815 ttgttgttgct---tatgattactttgatattggttactactttcttttgctccacgcatcatagttttattggtgtga-ttttgcgtccgaactcacaa 11049910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 14202417 - 14202223
Alignment:
Q  11 ttggtgtgtttgttt--ctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||| |    
T  14202417 ttggtgtgtttgtttatctcttctctctttatcttttgcttgtggttttaagcttttcactttgattactagattagatctaggtgttgttattattgtt 14202318  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    | ||| || ||| |||||||||||| ||||||||||||||| ||||||| || |||||||   ||||| ||| |||||| ||||||||||||||||    
T  14202317 gttgcttgcgttcactttgatattgattactactttcctttactccacatatcatagtttgtgttggtatga-ttttgactccgaattcacaacaa 14202223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 2334413 - 2334218
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    |||||||||||||| |||||||||||||||  |||||||||||||| | |||||| ||||||||||||||||| |||    
T  2334413 ttggtgtgtttgtttctctcttctctccctttatcttgtgcttgtggttttgaagttttcactttgattaccagattagatctaggtgttgttattattg 2334314  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
     || ||| |||||||||||||| |||||||||||||||||||| || |||| || |||||||  |||||||||| ||||||||| ||||||||||||    
T  2334313 ttgttgcttgtgtttactttgaaattggttactactttcctttgcttcacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 2334218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 30 - 203
Target Start/End: Original strand, 38312435 - 38312608
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||  || ||| |||||| |||||||    
T  38312435 tctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattgttgcttgtgttcactttga 38312534  T
Q  129 tattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    ||||||||||||||||||||| ||||||| || || ||||  |||||||||| ||||||||||||| |||||||||    
T  38312535 tattggttactactttcctttgctccacacatcattgtttatattggtgtga-ttttgagtccgaa-tcacaacaa 38312608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 17057365 - 17057167
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||| |||||||||||    
T  17057365 ttggtgtgtttgttcctctcgtctctccctttatcttttgcttgtggttttgtgcttttcactttaattcctagattagatctaggtgctgttattgttg 17057266  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
      |  ||| |||||| |||||||||||||||||||||||||||| ||| ||| || ||| |||  |||||||||| ||||||||||||||||||||||||    
T  17057265 attattgcttgtgttcactttgatattggttactactttcctttgctctacacatcatattttgtattggtgtga-ttttgagtccgaattcacaacaat 17057167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 17085348 - 17085150
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||| |||||||||||    
T  17085348 ttggtgtgtttgttcctctcgtctctccctttatcttttgcttgtggttttgtgcttttcactttaattcctagattagatctaggtgctgttattgttg 17085249  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
      |  ||| |||||| |||||||||||||||||||||||||||| ||| ||| || ||| |||  |||||||||| ||||||||||||||||||||||||    
T  17085248 attattgcttgtgttcactttgatattggttactactttcctttgctctacacatcatattttgtattggtgtga-ttttgagtccgaattcacaacaat 17085150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 36773734 - 36773926
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||| ||| |||||||| ||||||||||||||||| ||| ||     
T  36773734 ttggtgtgtttgtttctcttctttctttatcttttgcttgtggttttgagcttttcttttttattactagattagatctaggtgttgttattattgttgt 36773833  T
Q  111 tgcct-gtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| |  ||||  ||||||||||||||||||||||| ||| ||||||| || |||||||  |||||||||| |||||| |||||||||||||||    
T  36773834 tgcttcttgttggctttgatattggttactactttcatttgctccacacatcatagtttgtattggtgtga-ttttgaatccgaattcacaaca 36773926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 29868045 - 29868237
Alignment:
Q  15 tgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    |||||||||||||||    ||||| |||||||| |||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||| ||     
T  29868045 tgtgtttgtttctctcttctctccgtttatcttgtgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgt 29868144  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| |||||||||||| | |||| |||||||||| |||| ||||||| || |||||||  |||| |||||  |||||||||||||||||||||    
T  29868145 tgcttgtgtttactttaaaattgattactacttttctttgctccacacatcatagtttgtattgctgtgaaatttgagtccgaattcacaaca 29868237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 6595001 - 6594804
Alignment:
Q  11 ttggtgtgtttgtttctct----tctcccttt-atcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgtt 105  Q
    |||||||||||||||||||    ||||||||| |||||||||||||||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||    
T  6595001 ttggtgtgtttgtttctctcttctctcccttttatcttttgcttgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgtt 6594902  T
Q  106 g-ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    |  |  | | |||||| ||||||||||||||||||||||| |||| ||||||| || |||||||  |||||||||| |||||||||| |||||||||||    
T  6594901 gattattacttgtgttcactttgatattggttactactttactttgctccacacatcatagtttgtattggtgtga-ttttgagtccaaattcacaaca 6594804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 1345634 - 1345733
Alignment:
Q  6 atttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgtt 105  Q
    |||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1345634 atttcttggtgtgtttgtttctcttctcactttatcttatgattgtggttttgagcttttcactttgattcctagattagatctaggtgttgttattgtt 1345733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 13121928 - 13122124
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||  | ||||||| |||||| |||||||| |||||||| ||||||    
T  13121928 taaacatttattgttgtgtttgtttctcttctctctttatcttttgcttgtggttttatgtttttcac-ttgatttctagattacatctaggt-ttgtta 13122025  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    |||||| | |||| ||   ||| |||||||||| ||| |||||| |||| ||||||| || ||||||| |||||||||| ||||| ||||||||||||||    
T  13122026 ttgttgttactgcttgatgttattttgatattgattagtacttttctttactccacacatcatagttttattggtgtga-ttttgtgtccgaattcacaa 13122124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 12123591 - 12123392
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    |||| ||||||||| ||||||||||||||| || |||||||||||||||||| |||||   ||||||| |||||| |||||||| || ||||| ||||||    
T  12123591 taaatatttcttggcgtgtttgtttctcttatctctttatcttttgcttgtgattttgtatttttcac-ttgatttctagattagatataggt-ttgtta 12123494  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    |||||| || ||  || | |||||||||||||||||||||||||||||| ||||||| | ||||  || || ||||| | |||||||||| |||||||||    
T  12123493 ttgttgttgttgtttgaggttactttgatattggttactactttcctttgctccacaca-tataaatttataggtgtaatttttgagtccaaattcacaa 12123395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 45099927 - 45100077
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||| ||||||||||| ||| | ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  45099927 ttggtgtgtttgtttctctcttctctccttttatattttgcttgtgattt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttg 45100025  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccaca 157  Q
      |  ||| |||||| |||||||||||||||||||||||||||| |||||||    
T  45100026 attattgcttgtgttcactttgatattggttactactttcctttgctccaca 45100077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 36205660 - 36205499
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||| |||||||||||||||   ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  36205660 ttggtgtgtttgtttctctcttctctccttttatattttgcttgtggtttct-gcttttcactttgattcctagattagatctaggtgctgttattgttg 36205562  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      |  ||| |||||| |||||| ||||||||||||||||||||| ||||||| || |||||||    
T  36205561 attattgcttgtgttcactttgttattggttactactttcctttgctccacacatcatagttt 36205499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 5723251 - 5723072
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||| | |||||||  |||||||||||||||| |||||||||||||||||||||    
T  5723251 ttggtgtgtttgtttctctattctctccttttatcttttgcttgtggttt-gtgcttttctttttgattcctagattagatctaggtgttgttattgttg 5723153  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttg 185  Q
      |  ||  |||| | ||||||||||||||||||||||| |||| ||||||| || |||||||  |||||||||| |||||    
T  5723152 attattgtttgtgctcactttgatattggttactactttactttgctccacacatcatagtttgtattggtgtgatttttg 5723072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 4503128 - 4502933
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| |||||||| |||||||| ||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  4503128 ttggtgtgtttgtttctctcttctctccttttatcttgtgcttgtg-ttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttg 4503030  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaaca 202  Q
      |  ||| ||  || |||||| ||||||||||||||||||||| ||||||| ||||||||||  ||||||||||  |||||| || ||||||||||||    
T  4503029 attattgcttgcattcactttgttattggttactactttcctttactccacacattatagtttgtattggtgtga--tttgagaccggaattcacaaca 4502933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 26353346 - 26353485
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||| ||| ||||||||||||||| ||| | |||||||||||||||||||||| | ||||||||||||||     |||| ||||| || ||||||    
T  26353346 taaacattttttg-tgtgtttgtttctctcctctccttatcttttgcttgtggttttgtgtttttcactttgatt-----attagatctaagttttgtta 26353439  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttt 149  Q
    |||||| | ||   |||| ||||||| ||||||||||||||||||||||    
T  26353440 ttgttgttcct---tgtgattactttaatattggttactactttccttt 26353485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 4484300 - 4484173
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||| |||||||| |||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||  |  ||| ||   | ||||||     
T  4484300 tctccttttatcttgtgcttgtggttttt-gcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcactcactttgt 4484202  T
Q  129 tattggttactactttccttttctccaca 157  Q
    ||||||||||||||||||||| |||||||    
T  4484201 tattggttactactttcctttgctccaca 4484173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 17490154 - 17489958
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgag--cttttcactttgattcctagattaaatctaggtgttgt 98  Q
    ||||||||||||  | ||||||||||||||||| ||||||| ||||||||||||||||||   ||||||| || || |||| ||||||||||||| || |    
T  17490154 taaacatttcttaatatgtttgtttctcttctctctttatcatttgcttgtggttttgagttgttttcac-ttaatccctaaattaaatctaggt-ttat 17490057  T
Q  99 tattgttgctgctgcctgtgtttactttgatattggttactactttccttttctc--cacaaattatagtttcattggtgtgagttttgagtccgaattc 196  Q
    |||||||| |      |||| ||||||||||||||||||||| ||||  || |||  |||| || ||||||| |||||||  | ||||||||||||||||    
T  17490056 tattgttgtt------tgtggttactttgatattggttactattttctcttgctccacacacatcatagttttattggtg-caattttgagtccgaattc 17489964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 30833544 - 30833619
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||| |||||||| |||||||||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  30833544 tctccttttatcttgtgcttgtggttt-gtgcttttcactttgtttcctagattagatctaggtgttgttattgttg 30833619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 32289764 - 32289839
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||| |||||||| |||||||| ||||  ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  32289764 tctccttttatcttgtgcttgtg-ttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttg 32289839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7815280 - 7815190
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgag-cttttcactttgattcctagattaaatctag 91  Q
    |||| |||||||||||||||||||||||||||  |||||||||||||||| | ||||| |  ||||||| ||||||||||||||| ||||||    
T  7815280 taaatatttcttggtgtgtttgtttctcttctttctttatcttttgcttgcgattttgtgttttttcac-ttgattcctagattagatctag 7815190  T

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Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 1346413 - 1346519
Alignment:
Q  97 gttattgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattc 196  Q
    ||||||||||||||||| |||| ||||||  ||||||||||||| |||||||| ||||||| ||  |  ||||||| ||| ||||||||| | |||||||    
T  1346413 gttattgttgctgctgcttgtgattacttaaatattggttactattttcctttactccacacatctttatttcattagtgcgagttttgaattcgaattc 1346512  T
Q  197 acaacaa 203  Q
    | |||||    
T  1346513 agaacaa 1346519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 41446315 - 41446357
Alignment:
Q  14 gtgtgtttgtttctcttctccctttatcttttgcttgtggttt 56  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  41446315 gtgtgtttgtttctcttctctctttatcttttgcttgtggttt 41446357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 4561247 - 4561435
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||||| ||||||| ||||| |||||  ||||||||||||||||||||||| | ||| ||| ||| ||| ||||||||||||||        |    
T  4561247 taaacatttcttg-tgtgtttctttct-ttctctatttatcttttgcttgtggttttgtgttttacac-ttggttcttagattaaatctag-------aa 4561336  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttcctttt-ctccacaaattatagtttcattggtgtgagttttgagtccgaattcaca 199  Q
    |||||  |||||| |  | ||||||||||||||||||||||||| |||||  |||||| ||   ||||| ||||||||||| |||||||||  |||||||    
T  4561337 ttgttattgctgcttaaggttactttgatattggttactacttttcttttgttccacacatctaagttt-attggtgtgagatttgagtccatattcaca 4561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 41446426 - 41446500
Alignment:
Q  127 gatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaaca 202  Q
    |||| |||||||||||||| ||| ||||||| |||  ||||| |||| ||||||||||||||| ||||||||||||    
T  41446426 gatactggttactactttcttttgctccacacatttaagttt-attgttgtgagttttgagtctgaattcacaaca 41446500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42019875 - 42019821
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttt 56  Q
    |||||| |||||||||||||||||||||||||| |||||| |||||| ||||||||    
T  42019875 taaacacttcttggtgtgtttgtttctcttctctctttat-ttttgcctgtggttt 42019821  T

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Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7597017 - 7596960
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttg 58  Q
    |||| |||| ||||||||||| ||||||||||| ||||||||||||||| || |||||    
T  7597017 taaatatttgttggtgtgtttatttctcttctctctttatcttttgcttttgtttttg 7596960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 28672102 - 28672151
Alignment:
Q  9 tcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttg 58  Q
    |||| |||||||||||||||||||| ||||||| |||||||||| |||||    
T  28672102 tctttgtgtgtttgtttctcttctctctttatcctttgcttgtgattttg 28672151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 19491696 - 19491499
Alignment:
Q  9 tcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||| |    
T  19491696 tcttggtgtgtttgtttcttttctcactttatcttttgtttgtggttttgagctttttactttgattcctagattagatataggtgttgttattgttgtt 19491597  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaacaataa 206  Q
    | | | ||||||||||||||||||| ||| ||||||||||| ||||||| || ||||||| ||||||  |||||||||||||||||||||||||||||    
T  19491596 gttacttgtgtttactttgatattgattaatactttcctttgctccacacatcatagttttattggttagagttttgagtccgaattcacaacaataa 19491499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 41366611 - 41366420
Alignment:
Q  11 ttggtgtgttt-gtttctcttctccc-tttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  41366611 ttggtgtgttttgtttctcttctcccatttatcttttgtttgtggttttgtgcttttcactttgattcctatattagatctaggtgttgttattgttgtt 41366512  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaa 200  Q
      ||| ||||||||||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||||||||||||||    
T  41366511 attgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 41366420  T

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Target: chr8; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 40321256 - 40321442
Alignment:
Q  15 tgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcc 114  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| || |||     
T  40321256 tgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgct 40321355  T
Q  115 tgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||||||||||||||||||| || |||||||||||| ||||||| || |||||||   | |||||| ||||||||| ||||||||||||    
T  40321356 tgtgtttactttgatattgattgctactttcctttgctccacatatcatagtttgtattgtgtga-ttttgagtcggaattcacaaca 40321442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 1292469 - 1292317
Alignment:
Q  2 aaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttat 101  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1292469 aaacatttcttggtgtgtttgtttctcttctctccttatcttttgctcgtggttttgagcttttcactttgattcctagattagatctaggtgttgttat 1292370  T
Q  102 tgttgctgctgcctgtgtttactttgatattggttactactttccttttctcc 154  Q
    ||||| | || | ||||||||||||||||||| |||||||||| |||| ||||    
T  1292369 tgttgttactacttgtgtttactttgatattgtttactacttttctttgctcc 1292317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 1345367 - 1345176
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||| ||||| ||| ||     
T  1345367 ttggtgtgtttgtttctcttctctctttatcttttgcttgtgattttgagattttcactttgattactagattagatctaggtgttattattattgttgt 1345268  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||  ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||  ||| |||||| |||||| |||||||||||||||    
T  1345267 tgtttgtgtttactttgatattggttactactttcctttgctccacagattattgtttgtatttgtgtga-ttttgaatccgaattcacaaca 1345176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 4743210 - 4743027
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||             
T  4743210 ttggtgtgtttgtttctcttctctctttatctttcgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttat--------- 4743120  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| ||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||  ||||||||||| |||||||||||||||||||||    
T  4743119 tgcttgtgtttactttggtattggttaccactttcctttgctccacacattatagtttgtattggtgtgagatttgagtccgaattcacaaca 4743027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 30143512 - 30143708
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30143512 ttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgttgttattgttg 30143611  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
      |  ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||| ||||||||||||    
T  30143612 attattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 30143708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 6599144 - 6599335
Alignment:
Q  11 ttggtgtgttt-gtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctg 109  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| ||| ||    
T  6599144 ttggtgtgttttgtttctcttctccctttatctttttcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttg 6599243  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
     |   |||||| |||||||||||||||||||||||||||| ||| ||| || |||||||  |||||||||| ||||||||||||||||||||||||    
T  6599244 tt---tgtgttcactttgatattggttactactttcctttgctctacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaat 6599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 6674597 - 6674788
Alignment:
Q  11 ttggtgtgttt-gtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctg 109  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| ||| ||    
T  6674597 ttggtgtgttttgtttctcttctccctttatctttttcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttg 6674696  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
     |   |||||| |||||||||||||||||||||||||||| ||| ||| || |||||||  |||||||||| ||||||||||||||||||||||||    
T  6674697 tt---tgtgttcactttgatattggttactactttcctttgctctacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaat 6674788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 15212958 - 15213155
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  15212958 ttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggctttgtgcttttcactttgattcctagattagatcaaggtgctgttattgttg 15213057  T
Q  107 ctgct-gcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
     |  | |  |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||||||||||||||||||||||||||    
T  15213058 attattgtttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 15213155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 5689447 - 5689635
Alignment:
Q  15 tgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcc 114  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||| || ||| |||||||||| ||| || |||     
T  5689447 tgtgtttgtttctcttctctctttatcttttacttgtggttttgagcttttcactttgattactaaattagatttagatgttgttattattgttgttgct 5689546  T
Q  115 tg-tgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    || ||||| ||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||| ||||||||||||    
T  5689547 tgttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtcggaattcacaaca 5689635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 43036595 - 43036793
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||| |||| || |||    
T  43036595 ttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgagcttttcactttggttactagattagatctaggtggtgttgttattg 43036694  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
     || ||| |||||||||||||| |||||||||||||||||||| ||||||| || ||  |||  ||||||||||||||||||||| |||||| ||||||    
T  43036695 ttgttgcttgtgtttactttgaaattggttactactttcctttgctccacacatcattttttgtattggtgtgagttttgagtccaaattcataacaat 43036793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 3303666 - 3303474
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgatt----cctagattaaatctaggtgttgttattgttg 106  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||  |||||||||||||||    ||||||||| |||||||||| |||||| |||    
T  3303666 ttggtgtgtttgtttctcttctctctttatcttttgcttgtgattttgtacttttcactttgattgattcctagattagatctaggtgtagttattattg 3303567  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcac 198  Q
     || ||| |||||||  ||||||||||||||| |||||||||| ||||||| || |||||||  ||||||||||| |||||||||||||||||    
T  3303566 ttgttgcttgtgtttgttttgatattggttaccactttcctttgctccacacatcatagtttgtattggtgtgagatttgagtccgaattcac 3303474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 10015245 - 10015443
Alignment:
Q  5 catttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgt 104  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||| |||| |||||||| |||||||| |    
T  10015245 catttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattat 10015344  T
Q  105 tgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaat-tatagtttcattggtgtgagttttgagtccgaattcacaaca 202  Q
    || |  ||| |||||| |||||||||||||||| ||||||||| | ||||||| || | |  |||||||||||| |||||| | |||||||||||||||    
T  10015345 tgtttttgcttgtgttcactttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttaaatccgaattcacaaca 10015443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 18106058 - 18105874
Alignment:
Q  20 ttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgt 119  Q
    |||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||| ||||||||||| |  ||| |||||    
T  18106058 ttgtttctcttctctctttatcttttgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgatgttattgttgttattgcttgtgt 18105959  T
Q  120 ttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    ||||||| |||||||||||||||||||||| ||| ||| || |||||||  ||| |||||| ||||||||| ||||||| ||||||    
T  18105958 ttactttaatattggttactactttcctttgctctacacatcatagtttgtattagtgtga-ttttgagtctgaattcataacaat 18105874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 3073880 - 3073686
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctagg--tgttgt 98  Q
    |||||||||||  ||||||||||||||||| || ||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||  ||||||    
T  3073880 taaacatttctatgtgtgtttgtttctcttatctctttatcttttgcttgtggttttgtactcttcacttt-attcctagattaaatctaggtttgttgt 3073782  T
Q  99 tattgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattc 196  Q
    | |||||||||||   |||| ||||||||||| |||||| ||||||||||| ||||||| || ||||||| |||||||||  ||||||||||||||||    
T  3073781 tgttgttgctgctcattgtggttactttgatactggttattactttcctttgctccacatatgatagttt-attggtgtg-tttttgagtccgaattc 3073686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 4731830 - 4732028
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  4731830 ttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttg 4731929  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
      |  ||  |||||| |||||||||| ||||||||||||||||| ||||||| || || ||||  |||||||||| |||||||| |||||||||||||||    
T  4731930 attattgtttgtgttcactttgatatcggttactactttcctttgctccacacatcattgtttgtattggtgtga-ttttgagttcgaattcacaacaat 4732028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 12702630 - 12702430
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattc-ctagattaaatctaggtgt---tgttatt 102  Q
    ||||| |||||||||||||    |||||||||||||| |||||||||||||| | ||||||||||||||  |||||||| ||||||||||   |||||||    
T  12702630 ttggtatgtttgtttctctcttctctccctttatcttgtgcttgtggttttgtgtttttcactttgattttctagattagatctaggtgtcgttgttatt 12702531  T
Q  103 gttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaac 201  Q
     ||| || ||| ||||||||||||||||||||||||||||||||||| ||||||| || |||||||  |||| ||||| |||||||||||||||||||||    
T  12702530 attgttgttgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattgatgtga-ttttgagtccgaattcacaac 12702432  T
Q  202 aa 203  Q
    ||    
T  12702431 aa 12702430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 27811478 - 27811601
Alignment:
Q  35 ctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttgatattg 133  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||||||||||||||||||  |  ||| |||||| ||||||||||||    
T  27811478 ctttatcttttgcttgtgattttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattg 27811577  T
Q  134 gttactactttccttttctccaca 157  Q
    |||||||||||||||| |||||||    
T  27811578 gttactactttcctttcctccaca 27811601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 202
Target Start/End: Original strand, 33352345 - 33352518
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||| |||||||||||||||||| |||| | |||||||||||||| |||||||| || ||||||||||||||||||  |  ||| |||||| |||||||    
T  33352345 tctccttttatcttttgcttgtggatttgtgtttttcactttgatttctagattagatttaggtgttgttattgttgattattgcttgtgttcactttga 33352444  T
Q  129 tattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||||||||| ||||||||||| ||||||| || ||| |||  |||||||||| |||||||| |||||||||||||    
T  33352445 tattggttattactttcctttgctccacatatcataatttatattggtgtga-ttttgagtacgaattcacaaca 33352518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 42498367 - 42498518
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgtt- 105  Q
    |||||||||||||||| ||    ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||     
T  42498367 ttggtgtgtttgtttccctcttctctccttttatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgttgttattgtta 42498466  T
Q  106 gctgctgcctgtgtttactttgatattggttactactttccttttctccaca 157  Q
      |  ||| |||||| ||||||||||||||| |||||||||||| |||||||    
T  42498467 attattgcttgtgttcactttgatattggttgctactttcctttgctccaca 42498518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 34254326 - 34254165
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||| | ||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  34254326 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgctgttattgttg 34254228  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      |  ||| |||| | |||||||||||||||||||||||||||| ||||||| || |||||||    
T  34254227 attattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagttt 34254165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 8965697 - 8965492
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagctttt--------cactttgattcctagattaaatctagg 92  Q
    ||||||||| | ||||||||||||||| ||||| |||||||||||| |||||||||||   ||||        ||||| |||||||||||||||||||||    
T  8965697 taaacatttatcggtgtgtttgtttcttttctctctttatcttttgtttgtggttttgtttttttttttttttcactt-gattcctagattaaatctagg 8965599  T
Q  93 tgttgttattgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccga 192  Q
    | |||||||||||| || ||| |||| |||||||||||||||||||||| |||| || ||||||  || ||||||| |||||||||| |||||||| |||    
T  8965598 t-ttgttattgttgttgttgcttgtggttactttgatattggttactacgttcc-ttgctccacgcatcatagttttattggtgtga-ttttgagttcga 8965502  T
Q  193 attcacaaca 202  Q
    ||||||||||    
T  8965501 attcacaaca 8965492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 8153967 - 8154147
Alignment:
Q  19 tttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtg 118  Q
    ||||||||||||||   |||||||||||| |||  ||||| | |||||||||| |||||||||||| |||||||| |||||||| ||| || ||| ||||    
T  8153967 tttgtttctcttctttgtttatcttttgcatgtaattttgtgtttttcacttt-attcctagattacatctaggt-ttgttattattgttgttgcttgtg 8154064  T
Q  119 tttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaaca 202  Q
     |||||||||||||| ||||||||||||||| || |||| || ||||||| ||| |||||| ||||||| ||||||||||||||    
T  8154065 gttactttgatattgattactactttcctttacttcacacatcatagttttattagtgtga-ttttgagcccgaattcacaaca 8154147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 17982826 - 17983022
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  17982826 ttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttg 17982924  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgag-tccgaattcacaacaa 203  Q
      |  ||| |||||| |||||| ||||||||||||| ||||||| ||||||| || |||||||  ||||||||||  |||||| || |||||||||||||    
T  17982925 attattgcttgtgttcactttgttattggttactacgttcctttgctccacacatcatagtttgtattggtgtga--tttgagatcggaattcacaacaa 17983022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 18141990 - 18142105
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||  ||     
T  18141990 ttggtgtgcttgtttctctgctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatgtaggtgttgttattattattgt 18142089  T
Q  111 tgcctgtgtttacttt 126  Q
    ||| ||||||||||||    
T  18142090 tgcttgtgtttacttt 18142105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 44304028 - 44304187
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||| | |||||||||||||||| |||||||| |||||||||||||||||||||    
T  44304028 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttcactttgatttctagattagatctaggtgttgttattgttg 44304126  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagt 166  Q
      |  ||| |||| | ||||| |||||||||||||||||||||| ||||||| || |||||    
T  44304127 attattgcttgtgctcactttaatattggttactactttcctttgctccacacatcatagt 44304187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 1746214 - 1746017
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||| ||||||||||||||| | |||||| |||||||||||||||||| ||||||||| |||||||||||    
T  1746214 ttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gcgcttttgactttgattcctagattagatctaggtgctgttattgttg 1746116  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtt-tcattggtgtgagttttgagtccg-aattcacaacaa 203  Q
      |  ||| |||||| |||||| ||||||||||||||||||||| ||||||| || ||||||   |||||||||| ||||||| ||| ||||||||||||    
T  1746115 attattgcttgtgttcactttgttattggttactactttcctttactccacacatcatagttcgtattggtgtga-ttttgagaccgaaattcacaacaa 1746017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 34256502 - 34256341
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||| | ||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  34256502 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgctgttattgttg 34256404  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      |  ||| |||| | ||||| |||||||||||||||||||||| ||||||| || |||||||    
T  34256403 attattgcttgtgctcactttaatattggttactactttcctttgctccacacatcatagttt 34256341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 4733878 - 4734029
Alignment:
Q  11 ttggtgtgtttgtt--tctcttctc--cctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||||||||||||  |||||||||  |||||||||||| |||||||||||| |||||||| |||| |||||| |||  |||||||||||||||||||||    
T  4733878 ttggtgtgtttgttcctctcttctctacctttatcttttccttgtggttttgtgcttttcattttgtttcctacatttgatctaggtgttgttattgttg 4733977  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccaca 157  Q
      |  ||| |||||| | |||||||||||||||||||||||||| |||||||    
T  4733978 attattgcttgtgttcattttgatattggttactactttcctttgctccaca 4734029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 19945354 - 19945156
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||| ||||||||||||||| | ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  19945354 ttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgcttttcacttcgattcctagattagatctaggtgctgttattgttg 19945256  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaacaa 203  Q
      |  ||| ||  || |||||| ||||||||||||||||||||| ||||||| || | |||||  |||||||||| ||||||| || |||||||||||||    
T  19945255 attattgcttgcattcactttgttattggttactactttcctttgctccacacatcaaagtttgtattggtgtga-ttttgagaccggaattcacaacaa 19945157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 3051090 - 3050924
Alignment:
Q  40 tcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctg----tgtttactttgatattggt 135  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||| || ||| ||    || || |||||||  ||||    
T  3051090 tcttatgcttgtggttttgagcttttcactttaatttctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggt 3050991  T
Q  136 tactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaacaa 203  Q
    ||||||||| |||| ||||||| || ||  ||| ||||||||||| ||||||||| ||||||||||||    
T  3050990 tactacttttctttactccacacatcattattt-attggtgtgagatttgagtcccaattcacaacaa 3050924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 30291780 - 30291853
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagatta 84  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  30291780 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgaactttccactttgattactagatta 30291853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 31218430 - 31218628
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| |||||||| ||||| || ||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  31218430 ttggtgtgtttgtttctctcttctctccttttatcttgtgcttatg-ttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttg 31218528  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaacaa 203  Q
      |  ||| ||  || |||||| |||||||| |||||||||||| ||||||| || |||||||  ||||||||||  |||||| || |||||||||||||    
T  31218529 attattgcttgcattcactttgttattggttgctactttcctttgctccacacatcatagtttatattggtgtga--tttgagaccggaattcacaacaa 31218626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 32902175 - 32901988
Alignment:
Q  15 tgtgtttgtttctcttctccc--tttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctg 112  Q
    |||||||||||||||||| |   |||||||||||||| |||||||| | ||||||||| | ||||||||||| |||||||| ||||| |||||| || ||    
T  32902175 tgtgtttgtttctcttcttctcttttatcttttgcttttggttttgtgtttttcacttgg-ttcctagattagatctaggt-ttgttgttgttgttgttg 32902078  T
Q  113 cctgtgtttactttgatattggttactactttcctttt-ctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaacaa 203  Q
      || | || |||||||||| ||||||||||  ||||| ||||||| ||   ||||| |||||| ||| |||||||||||||||||||||||    
T  32902077 tttgaggttgctttgatattagttactacttctcttttgctccacacatctaagttt-attggtctga-ttttgagtccgaattcacaacaa 32901988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 11712005 - 11711805
Alignment:
Q  1 taaacatttcttggtgtgtttgt---ttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttg 97  Q
    ||||||||||||| | |||||||   |||| ||||| ||||||| |||| ||||||||||  ||||| |||| | ||||||| |||| |||||||| |||    
T  11712005 taaacatttcttgatatgtttgtaatttcttttctctctttatcctttgtttgtggttttatgctttacactct-attcctatattagatctaggt-ttg 11711908  T
Q  98 ttattgttgctgctgcctgtgtttactttgatattggttactactttcctttt-ctccacaaattatagtttcattggtgtgagttttgagtccgaattc 196  Q
    | ||||||| || | | || | ||||||| || |||||||||||||||||||| ||||||| ||   ||||| |||||||| | ||||||||||||||||    
T  11711907 t-attgttgttgtttcttgaggttacttttatcttggttactactttccttttgctccacacatctaagttt-attggtgt-aattttgagtccgaattc 11711811  T
Q  197 acaaca 202  Q
    ||||||    
T  11711810 acaaca 11711805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 3231728 - 3231642
Alignment:
Q  120 ttactttgatattggttactactttcctttt-ctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaacaataa 206  Q
    ||||||||||||| |||||||||||| |||| ||||||| ||   ||||| ||||||||||| || ||||||||||||||||||||||    
T  3231728 ttactttgatattagttactactttcattttactccacacatccaagttt-attggtgtgagattagagtccgaattcacaacaataa 3231642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 203
Target Start/End: Original strand, 4162692 - 4162833
Alignment:
Q  62 ttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgat----attggttactactttccttttctccaca 157  Q
    ||||||||||||||||||||||| |||||||| || ||||||||| || |   |||| ||||||||||    ||||||||| | ||| |||| |||| ||    
T  4162692 ttttcactttgattcctagattagatctaggttttattattgttgttgtt---tgtgattactttgatattaattggttaccatttttctttgctcctca 4162788  T
Q  158 aattatagtttcattggtgtgagttttgagtccgaattcacaacaa 203  Q
     || || |||| | |||| ||| |||||||||||||||||||||||    
T  4162789 catcattgttttactggtatga-ttttgagtccgaattcacaacaa 4162833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 2627935 - 2628009
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||| |||||||| |||||||| ||||  ||||||||||| | ||||||||||| |||||||||||||||||||||    
T  2627935 tctccttttatcttgtgcttgtg-ttttatgcttttcactt-gtttcctagattagatctaggtgttgttattgttg 2628009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 7493246 - 7493353
Alignment:
Q  93 tgttgttattgttgctgctgcctgtgtttacttt-gatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccg 191  Q
    ||||||| ||||||||||||| || |  ||||||  | |||| ||||||| ||||||| ||||||| || ||||||| |||||||||| |||   |||||    
T  7493246 tgttgttgttgttgctgctgcttgagactactttacacattgattactac-ttcctttgctccacacatcatagttttattggtgtgatttt---gtccg 7493341  T
Q  192 aattcacaacaa 203  Q
    ||||||||||||    
T  7493342 aattcacaacaa 7493353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 7597798 - 7597909
Alignment:
Q  21 tgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtt 120  Q
    ||||||||||||| |||||||||||| || | |||||| | ||| ||| ||| |||||| |||| ||||| || |||||||||||| || ||| |  | |    
T  7597798 tgtttctcttctctctttatcttttgtttatcgttttgtgttttacac-ttggttcctaaattagatctaagt-ttgttattgttggtgttgcttcaggt 7597895  T
Q  121 tactttgatattgg 134  Q
    ||||||||||||||    
T  7597896 tactttgatattgg 7597909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 4e-65; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 14521677 - 14521475
Alignment:
Q  7 tttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||    
T  14521677 tttcttggtgtgtttatttcttttctcactttatcttatgcttgtggttttgagcttttcactttgattcctagattagatctaggtgttgttgttattg 14521578  T
Q  107 ctgctgcctgtgtttactttgatattggttac----tactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaaca 202  Q
     || ||| |||||||||||||| |||||||||    |||||| |||| ||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  14521577 ttgttgcttgtgtttactttgaaattggttactacgtacttttctttgctccacacatcatagtttcattggtgtgagttttgagtccgaattcacaaca 14521478  T
Q  203 ata 205  Q
    |||    
T  14521477 ata 14521475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 28137412 - 28137211
Alignment:
Q  3 aacatttcttggtgtgtttg--tttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||||| |||||   ||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||||||||    
T  28137412 aacatttcttggtatgttttgttttatcttctccctttatcttttgcttgtggttatgtgcttttcactttgattcctatattagatctatgtgttgtta 28137313  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcaca 199  Q
    |||| | |  ||| ||||||||||||||||||||||||||||||||||| |||||||  | |||||||  |||||||||| ||||||| |||||||||||    
T  28137312 ttgtcgttattgcttgtgtttactttgatattggttactactttcctttgctccacacgtcatagtttgtattggtgtga-ttttgagaccgaattcaca 28137214  T
Q  200 aca 202  Q
    |||    
T  28137213 aca 28137211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 16569194 - 16569389
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| || |||||||| |    
T  16569194 ttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgatttctagattagatctaggtgctgctattgttgtt 16569293  T
Q  109 gctgcctgtgtttactttgatattggttactactttcctttt-ctccacaaattatagtt--tcattggtgtgagttttgagtccgaattcacaaca 202  Q
      ||| || ||| |||||||| |||||||||||||||||||| ||||||| || ||||||    |||||||||| ||||||||||||||||||||||    
T  16569294 attgcttgagttcactttgattttggttactactttccttttgctccacacatcatagttgaatattggtgtga-ttttgagtccgaattcacaaca 16569389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 26954274 - 26954086
Alignment:
Q  19 tttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtg 118  Q
    ||||||||||||||| |||||  |||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| |  | | | ||    
T  26954274 tttgtttctcttctctctttacatttttcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgttatttcttatg 26954175  T
Q  119 tttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaataac 207  Q
    |||||||||| |||||||||||||||| ||| ||||||| || |||||||  |||||||||| |||||||||||||||||||||| ||||    
T  26954174 tttactttgaaattggttactactttcttttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacactaac 26954086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 3038919 - 3038729
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||||||||||||||| ||| ||     
T  3038919 ttggtgtgtttgtttcttttctctctttatcttttgcttgtggttttgaacttttcactttgattactatattagatctaggtgttgttattattgttgt 3038820  T
Q  111 tgcctg-tgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaa 200  Q
    | | || ||||| ||||||||||||||| ||||||||||| ||| ||| || |||||||  |||||| ||| |||||||| |||||||||||    
T  3038819 tacttgttgtttgctttgatattggttattactttcctttgctcgacacatcatagtttgtattggtctga-ttttgagttcgaattcacaa 3038729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 9183004 - 9182865
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||  |  ||| |||||| |||||||    
T  9183004 tctccctttatcttttgcttgtggttttgtacttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttga 9182905  T
Q  129 tattggttactactttccttttctccacaaattatagttt 168  Q
    ||||||||||||||||||||| ||||||| || |||||||    
T  9182904 tattggttactactttcctttgctccacacatcatagttt 9182865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 5409065 - 5408904
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  5409065 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgttgttattgttg 5408967  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      |  ||| |||| | |||||||||||||||||||||||||||| ||||||| || |||||||    
T  5408966 attattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagttt 5408904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 5413390 - 5413229
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  5413390 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgttgttattgttg 5413292  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      |  ||| |||| | |||||||||||||||||||||||||||| ||||||| || |||||||    
T  5413291 attattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagttt 5413229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 33211181 - 33211060
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||||| |      
T  33211181 ttggtatgtttgtttctcttctctctttatcttttgcttgtggttttgtgattttcactttgattcctagattagatctaggtgttattattgttgttat 33211082  T
Q  111 tgcctgtgtttactttgatatt 132  Q
    ||| |||||||||||| |||||    
T  33211081 tgcttgtgtttactttaatatt 33211060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 33160347 - 33160185
Alignment:
Q  11 ttggtgtgtttgtttctct----tctcccttt-atcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgtt 105  Q
    |||||||||||||||||||    ||||| ||| |||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||||||||| | ||    
T  33160347 ttggtgtgtttgtttctctcttctctcctttttatcttttgtttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttaatatt 33160248  T
Q  106 gctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
    | || ||| ||| |||||||||| ||||||||||| |||||||| ||||||| || |||||||    
T  33160247 gttgttgcttgtatttactttgaaattggttactattttcctttgctccacacatcatagttt 33160185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 16452324 - 16452123
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttat-cttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgtt 105  Q
    |||||||||||||||||||    ||||| |||||  |||||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  16452324 ttggtgtgtttgtttctctcttctctccttttatatttttgcttgtgg-tttgtgcttttcactttgattcctagattagatctaggtgatgttattgtt 16452226  T
Q  106 g-ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtt-tcattggtgtgagttttgag-tccgaattcacaaca 202  Q
    |  |  ||| ||| || |||||| ||||||||||||||||||||| ||||||| || ||||||   |||||||||| ||||||| || ||||||||||||    
T  16452225 gattattgcttgtattcactttgttattggttactactttcctttactccacacatcatagttcgtattggtgtga-ttttgagatcggaattcacaaca 16452127  T
Q  203 ataa 206  Q
    ||||    
T  16452126 ataa 16452123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 31404670 - 31404510
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||| | ||||| | ||||||||||||||||| ||||||||| |||||||||||    
T  31404670 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgctttcctctttgattcctagattagatctaggtgctgttattgttg 31404572  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtt 167  Q
      |  ||| |||| | |||||||||||| |||||| |||||||| ||||||| || ||||||    
T  31404571 attattgcttgtgctcactttgatattgattactattttcctttgctccacacatcatagtt 31404510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 5406195 - 5406037
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||| ||||||||| | ||||||| ||||||||||||||||| ||||||||| | |||||| |     
T  5406195 ttggtgtgtttgtttctctcttctctccttttatcttttgtttgtggttt-gtgcttttctctttgattcctagattagatctaggtgctattattgat- 5406098  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
     |  ||| |||| | ||||| ||||||||||||||||| |||| ||||||| || |||||||    
T  5406097 -tattgcttgtgctcactttaatattggttactacttttctttactccacacatcatagttt 5406037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 5410520 - 5410362
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||| ||||||||| | ||||||| ||||||||||||||||| ||||||||| | |||||| |     
T  5410520 ttggtgtgtttgtttctctcttctctccttttatcttttgtttgtggttt-gtgcttttctctttgattcctagattagatctaggtgctattattgat- 5410423  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
     |  ||| |||| | ||||| ||||||||||||||||| |||| ||||||| || |||||||    
T  5410422 -tattgcttgtgctcactttaatattggttactacttttctttactccacacatcatagttt 5410362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 4045584 - 4045773
Alignment:
Q  5 catttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||   ||||||| ||||||| ||||||| |||||||| ||| || |||    
T  4045584 catttcttggtgtgtttgtttctcttctctctttatcttttactcgtggttttgtttttttcac-ttgattcttagattagatctaggt-ttgctagtgt 4045681  T
Q  105 tgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    |  || |   ||   |||||||||||||||||||||||||| ||  || |||| | ||||   | |||||||||| |||||||||| |||||||||    
T  4045682 tattgtt---tgaagttactttgatattggttactactttctttaacttcacaca-tataagattattggtgtgaattttgagtccaaattcacaa 4045773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 30834531 - 30834333
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttt-tgagcttttcactttgattcctagattaaatctaggtgttgttattgtt 105  Q
    ||||||||||||||| |||    ||||| ||||| ||||||||||||||| ||   ||||||||||||||| ||||||| ||||||||| ||||||||||    
T  30834531 ttggtgtgtttgtttatctcttctctccttttatattttgcttgtggtttgtgtttttttcactttgattcatagattagatctaggtgctgttattgtt 30834432  T
Q  106 g-ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttc--attggtgtgagttttgagtccg-aattcacaac 201  Q
    |  |  ||| ||  || |||||| |||||||||||| |||||||| ||||||| || ||| ||||  |||||||||| ||||||| ||| ||||||||||    
T  30834431 gattattgcttgcattcactttgttattggttactattttcctttgctccacacatcata-tttcgtattggtgtga-ttttgagaccgaaattcacaac 30834334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 2171468 - 2171424
Alignment:
Q  62 ttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||    
T  2171468 ttttcactttgattcctagattagatctaggtgctgttattgttg 2171424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 257308 - 257243
Alignment:
Q  138 ctactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaacaat 204  Q
    |||||||||||| ||||||| |||||| ||  |||||||||| |||||||| |||||||||||||||    
T  257308 ctactttcctttgctccacacattataattatattggtgtga-ttttgagttcgaattcacaacaat 257243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12221110 - 12221048
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagctt 63  Q
    ||||||||||||||||||||| |||||||| |  ||||||||||||| ||| |||||| ||||    
T  12221110 taaacatttcttggtgtgtttatttctcttatatctttatcttttgcgtgtagttttgtgctt 12221048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 602935 - 602902
Alignment:
Q  170 attggtgtgagttttgagtccgaattcacaacaa 203  Q
    ||||||||||||||||||||||||||||||||||    
T  602935 attggtgtgagttttgagtccgaattcacaacaa 602902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 4e-65; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 41361085 - 41361282
Alignment:
Q  9 tcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||| |    
T  41361085 tcttggtgtgtttgtttcttttctcactttatcttttgtttgtggttttgagctttttactttgattcctagattagatataggtgttgttattgttgtt 41361184  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaacaataa 206  Q
    | | | ||||||||||||||||||| ||| ||||||||||| ||||||| || ||||||| ||||||  |||||||||||||||||||||||||||||    
T  41361185 gttacttgtgtttactttgatattgattaatactttcctttgctccacacatcatagttttattggttagagttttgagtccgaattcacaacaataa 41361282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 23555272 - 23555067
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  23555272 taaacatttcttggtgcgtttgtttctcttctctctttatgttttgcttgtggttttgagcttttcactatgattcctaaattagatctaggtgttgtta 23555173  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttc-attggtgtgagttttgagtccgaattcaca 199  Q
    |||||| || ||| |||||||||||||| |||| |||||||||| |||| ||||||| || || ||||| ||||||| || |||||||||||||||||||    
T  23555172 ttgttgttgttgcttgtgtttactttgacattgattactacttttctttgctccacacatcattgtttctattggtgcga-ttttgagtccgaattcaca 23555074  T
Q  200 acaataa 206  Q
    |||||||    
T  23555073 acaataa 23555067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 13137968 - 13137780
Alignment:
Q  15 tgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcc 114  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||| || |||     
T  13137968 tgtgtttgtttctcttctctctttatcttttgcttgtggttttgaggttttcactttgattactagattagatctaggtgttgttattattgttgttgct 13137869  T
Q  115 tgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    |||||||||||||| |||||||||||||||||||| ||||||| || ||| |||  |||||||||||||||||||||||||| ||||||    
T  13137868 tgtgtttactttgaaattggttactactttcctttgctccacacatcataatttgtattggtgtgagttttgagtccgaatttacaaca 13137780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 834163 - 833970
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||| |    
T  834163 ttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattcccagattagatcttggtgttgttattgttgtt 834064  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
      ||| ||||||||||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||||||||||||||||    
T  834063 attgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaaca 833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 40122192 - 40122000
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||| ||     
T  40122192 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactaaattagatctaggtgttgttattattgttgt 40122093  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    ||| |||||| |||| ||||||||||||||||||||||| ||||||  || |||||||  |||||||||| |||||||||||||||||||||||    
T  40122092 tgcttgtgttcacttagatattggttactactttcctttgctccacgcatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 40122000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 50167171 - 50166979
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| ||| ||     
T  50167171 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgaacttttcactttgattactagattagatctaggtgttgttattattgttgt 50167072  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    | | ||||||||||||||||||||||||||||||||||| ||||||| || |||||||   ||||||||| |||||||| ||| ||||||||||    
T  50167071 ttcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgttttggtgtga-ttttgagttcgagttcacaacaa 50166979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 45644350 - 45644158
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| |||||||||| ||| ||     
T  45644350 ttggtgtgcttgtttctcttctctctttatcttttgtttgtggttttgagcttttcactttgattgctagattagatctagatgttgttattattgttgt 45644251  T
Q  111 tgcctg-tgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| || ||||| ||||||||||||||||||||||||||| ||||||| || |||||||  ||| |||||| ||||||||||||||||||||||    
T  45644250 tgcttgttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtatttgtgtga-ttttgagtccgaattcacaaca 45644158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 1833685 - 1833876
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||| | ||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||| ||| ||     
T  1833685 ttggtgtgtttgtttattttctctctttatcttttgcttgtagttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgt 1833784  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| |||||||||||||| ||||||||| |||||||||| ||||||| || |||||||  |||||||||| | ||||||||||||||||||||    
T  1833785 tgcttgtgtttactttgaaattggttacgactttcctttactccacagatcatagtttgtattggtgtga-tattgagtccgaattcacaaca 1833876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 28265550 - 28265359
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||| |||||||| |||||| |||||||||| ||| ||     
T  28265550 ttggtgtgtttgtttctcttctctctttatcttttggttgtggttttgagctttttactttgattactagattagatctagatgttgttattattgttgt 28265451  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||| |||||| ||||||||||||| ||||| |||||||| ||||||| || |||||||  |||||||||| |||||||||||||||| |||||    
T  28265450 tgcttgtgttcactttgatattggctactattttcctttactccacacatcatagtttgtattggtgtga-ttttgagtccgaattcccaaca 28265359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 28223394 - 28223219
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgat 129  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||| |||||||| ||||||||||||||||| ||| || ||| |||||| ||||||||    
T  28223394 tctccctttatcttttgcttgtgattttgtgtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgat 28223295  T
Q  130 attggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    |||||||||||||||| ||| ||||||| || |||||||  |||||| ||||||||||||||||||||||||||||    
T  28223294 attggttactactttcgtttgctccacacatcatagtttgtattggtctgagttttgagtccgaattcacaacaat 28223219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 30476442 - 30476247
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||| |||||||||| |||||||||||||||||||||||||||||  |||||||  |||| ||||||||||| |||    
T  30476442 ttggtgtgtttgttcctctcttctctccttttatcttttacttgtggttttgagcttttcactttgattattagattaggtctaagtgttgttattattg 30476343  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaac 201  Q
     || ||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||| ||||||||||||    
T  30476342 ttgttgcttgtgtttactttgaaattggttactactttcctttactccacacattatagtttgtattggtgtgagttttgagttcgaattcacaac 30476247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 3847117 - 3846917
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgt---tattgtt 105  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||   |||| ||    
T  3847117 ttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactatattagatctaggtgttgttattattatt 3847018  T
Q  106 gctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    | || ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  ||| || ||| ||||||||||||||||||||||||    
T  3847017 gttgttgcttgtgttcactttgatattggttactactttcctttactccacacatcatagtttgtattagtatga-ttttgagtccgaattcacaacaat 3846919  T
Q  205 aa 206  Q
    ||    
T  3846918 aa 3846917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 16455783 - 16455986
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| | |||||| |||||  ||||||||    
T  16455783 taaacatttcttggtgtatttgtttctcttctctctttatcttttacttgtggttttgagtttttcactttgattaccagattagatctatatgttgtta 16455882  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaat-tatagtttcattggtgtgagttttgagtccgaattcaca 199  Q
    || ||| || ||| |  |||||||||||||||||||||||||||| ||| || ||||||| | |  |||||||||||| | |||||||||||||||||||    
T  16455883 ttattgttgttgcttacgtttactttgatattggttactactttcatttgctacacaaatctttgttttcattggtgt-aattttgagtccgaattcaca 16455981  T
Q  200 acaat 204  Q
    |||||    
T  16455982 acaat 16455986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 37559863 - 37559662
Alignment:
Q  11 ttggtgtgtttgtt--tctcttctc---cctttatcttttgcttgtggttttgagcttttcactttgattcctaga-ttaaatctaggtgttgttattgt 104  Q
    ||||||||||||||  |||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||    
T  37559863 ttggtgtgtttgttcctctcttctctcccctttatcttttgcttgtggttttgtgcttttcactttgattcctagatttagatctaggtgctgttattgt 37559764  T
Q  105 tg-ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||  |  ||| |||||| |||||||||||||||||||||||||||| ||||| | || |||||||  |||||||||||||||||||||||||||||||||    
T  37559763 tgattattgcttgtgttcactttgatattggttactactttcctttgctccagacatcatagtttatattggtgtgagttttgagtccgaattcacaaca 37559664  T
Q  203 at 204  Q
    ||    
T  37559663 at 37559662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 30 - 203
Target Start/End: Complemental strand, 28220199 - 28220025
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgat 129  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| ||| || ||  |||||| ||||| ||    
T  28220199 tctccctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgtttgtgttcactttaat 28220100  T
Q  130 attggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    ||||||||||| ||| ||||  |||||| || |||||||  ||||||||||||||||||||||||||||||||||    
T  28220099 attggttactaattttctttgttccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaa 28220025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 50169206 - 50169049
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||| ||     
T  50169206 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatataggtgttgttattattgttgt 50169107  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
    ||  |||||| |||||||||||||||||||||||| ||| || |||| || |||||||    
T  50169106 tgtttgtgttcactttgatattggttactactttcatttgcttcacacatcatagttt 50169049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 204
Target Start/End: Original strand, 10925402 - 10925592
Alignment:
Q  15 tgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgc 113  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||  |  |||    
T  10925402 tgtgtttgtttatcttctctctttatcttttgcttgtggttttgagtttttccctttgattactagattagatctaggtgttgttattgttgattattgc 10925501  T
Q  114 ctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
     |||||| |||||||||||| ||||||||||||||| ||||||| |  |||||||  |||| ||||| ||||||||||||||||||||||||    
T  10925502 ttgtgttcactttgatattgattactactttcctttgctccacacaacatagtttgtattgttgtga-ttttgagtccgaattcacaacaat 10925592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 8550760 - 8550583
Alignment:
Q  27 tcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactt 125  Q
    ||||||| ||||||||| |||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||||||  |  ||| |||||| ||||    
T  8550760 tcttctctctttatcttgtgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactt 8550661  T
Q  126 tgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    |||||||||||||||||||||||| ||||||| || |||||||  |||||||||| |||||||||||||||||||||||    
T  8550660 tgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 8550583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 196903 - 196710
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgct 108  Q
    ||||||||||| |||||||  |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| || |||||||||||||| ||| |    
T  196903 ttggtgtgtttttttctctcttctctctttatcttttgcttgtggttttgagcttctcactttgattactagattagatgtaggtgttgttattattgtt 196804  T
Q  109 gctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    | ||| |||||| ||||||||||||||||||| |||||||| ||||||| || ||| |||  ||||||||||  ||||||| |||||||||||||    
T  196803 gttgcttgtgttcactttgatattggttactattttcctttgctccacacatcataatttgtattggtgtga-atttgagtacgaattcacaaca 196710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 35 - 205
Target Start/End: Complemental strand, 4552616 - 4552445
Alignment:
Q  35 ctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgatattgg 134  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||| || | | |||||||||||||| |||||    
T  4552616 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctatgtgttgttattattgttgttacttgtgtttactttgaaattgg 4552517  T
Q  135 ttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaata 205  Q
    ||||||||||||||| || |||  || |||||||  ||||||||||  ||||||||||||||| ||||||||    
T  4552516 ttactactttcctttacttcacgcatcatagtttgtattggtgtgaaatttgagtccgaattcgcaacaata 4552445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 168
Target Start/End: Original strand, 3157037 - 3157199
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  3157037 ttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttg 3157136  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      |  ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||    
T  3157137 attattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagttt 3157199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 927982 - 927785
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgatt-cctagattaaatctaggtgttgtt 99  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||  ||| |||| ||||| || |||||    
T  927982 taaacatttctttgtgtgtttgtttctcttctctctttatcttttgtttgtggttttgaacttttcactttgattatctatattagatctaagttttgtt 927883  T
Q  100 attgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcaca 199  Q
     |||||| || |   |||| ||||||||||||||||||| |||| ||||| ||||||| || ||||||| |||| ||||| |||||||||||||||||||    
T  927882 gttgttgttgtt---tgtgattactttgatattggttaccacttccctttactccacacatcatagttt-attgatgtga-ttttgagtccgaattcaca 927788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 13659332 - 13659153
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||| || |||||||||||||             
T  13659332 ttggtgtatttgtttctcttctctctttatcttttgcttgtggttttgtacttttca-tttgattcctagattagatttaggtgttgttat--------- 13659243  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaa 200  Q
    ||| ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||  |||| ||||| ||||||||||||||||||||    
T  13659242 tgcttgtgtttactttgatgttggttactactttcctttgctccacacattatagtttgtattgatgtga-ttttgagtccgaattcacaa 13659153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 15820469 - 15820659
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||| ||||||||||||||||||||||| | |||||  ||||||||| || ||||||||||  ||||||||||| |||| ||||||||||||||     
T  15820469 taaacatttattggtgtgtttgtttctcttctctccttatccattgcttgtgtttatgagcttttctatttgattcctatattagatctaggtgttgttg 15820568  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    ||||||||      |||||||||||||||||| |||||||||||||||| ||||||| ||   ||||| ||||  |||||||||||||||||||||||||    
T  15820569 ttgttgct------tgtgtttactttgatattagttactactttcctttgctccacacatctaagttt-attg--gtgagttttgagtccgaattcacaa 15820659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 31659433 - 31659613
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||| |||||||||||||| |||||||| |||||| |||||||||||||||||| ||| |||||||||||||||||  |  ||| |||||| | |||||    
T  31659433 tctccttttatcttttgcttatggttttgtgctttttactttgattcctagattagatcaaggtgttgttattgttgattattgcttgtgttcattttga 31659532  T
Q  129 tattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaataacat 209  Q
    |||||||||||||||| |||||||||||| || ||| |||  |||||||||| |||||||||||||||||||||||| ||||    
T  31659533 tattggttactacttttcttttctccacacatcatattttatattggtgtga-ttttgagtccgaattcacaacaattacat 31659613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 44455332 - 44455529
Alignment:
Q  11 ttggtgtgtttgtt--tctcttctc--cctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||||||||||||  |||||||||  |||||||||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||||||||||    
T  44455332 ttggtgtgtttgttcctctcttctcttcctttatcttttgcttttggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttg 44455431  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
      |  ||  |||||| ||||||||||||||||| ||||| |||||||||||| || |||||||  |||||||||| |||||||| ||||||||||||||    
T  44455432 attattgtttgtgttcactttgatattggttaccacttttcttttctccacatatcatagtttgtattggtgtga-ttttgagtacgaattcacaacaa 44455529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 208
Target Start/End: Original strand, 49918522 - 49918724
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||| |||||||||||||||||| |||| |||||||| |||||||||||||||| || |||||| |||||||||||    
T  49918522 ttggtgtgtttgttcctctcttctctccttttatcttttgcttgtggatttgtgcttttcattttgattcctagattagatataggtgctgttattgttg 49918621  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
      |  ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| ||||||||| ||||| |||||||     
T  49918622 attattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaatttacaacaac 49918720  T
Q  205 aaca 208  Q
    ||||    
T  49918721 aaca 49918724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 208
Target Start/End: Original strand, 46065090 - 46065284
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||||||| ||| ||     
T  46065090 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcctttcacatt-attagtagattagatctaggtgttgttattattgttgt 46065188  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaat-tatagtttcattggtgtgagttttgagtccgaattcacaacaataaca 208  Q
    ||| ||| |||||||||| ||||||||| ||| || ||| ||||||| || | |  ||||||| ||||| ||||||||||||||||||||||| |||||    
T  46065189 tgcttgtatttactttga-attggttacaactatcgtttgctccacacatctttgttttcatt-gtgtg-gttttgagtccgaattcacaacactaaca 46065284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 37503553 - 37503362
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||| ||||||||    
T  37503553 ttggtgtgtttgttcctctcttctctccctttatcttttgcttgcggttttgtgcttttcactttaattcctagattagatctaggtgttgatattgttg 37503454  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
      |  ||| |||||| |||||||||||     |||||||||||| ||||||| || |||||||  |||||||||| ||||||||||||||||||||||    
T  37503453 attattgcttgtgttcactttgatatt-----ctactttcctttactccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaaca 37503362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 20762845 - 20763041
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||     ||||||||||| ||||||||| |||||||||||    
T  20762845 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcac-----ttcctagattagatctaggtgctgttattgttg 20762939  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaacaa 203  Q
      |  ||| ||  || |||||||||||||||| ||||||||||| ||||||| || |||||||  |||||||||| ||||||| || |||||||||||||    
T  20762940 attattgcttgaattcactttgatattggttaatactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagaccggaattcacaacaa 20763038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5460069 - 5460216
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| ||||| || |||| ||||||||||  |||||||| |||||     
T  5460069 taaacatttcttgttgtgtttgtttctattctctctttatcttttgcttgtggttttgtgctttacattttg-ttcctagattcgatctaggt-ttgttc 5460166  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttcctttt 150  Q
    |||||| || ||  || | ||| ||||||||||||||||| || ||||||    
T  5460167 ttgttgttgttgtttgagattattttgatattggttactatttccctttt 5460216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 37282697 - 37282498
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatc-ttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtt 99  Q
    ||||||||| |||||| ||||||||||||||||  ||| || |||| |||||||||||| | |||||||  ||||| |||||||| |||||||| |||||    
T  37282697 taaacattttttggtgcgtttgtttctcttctctatttctcttttttcttgtggttttgcgtttttcac-ctgatttctagattagatctaggt-ttgtt 37282600  T
Q  100 attgttgctgctgcctgtgtttactttgatattggttactactttcctttt-ctccacaaattatagtttcattggtgtgagttttgagtccgaattcac 198  Q
    ||||||| || | | |||| ||||||| |||||  ||| |||||| ||||| ||||||| |||  ||||| |||||||||| ||||||||||||||||||    
T  37282599 attgttgttggtacttgtggttactttcatattaattattacttttcttttgctccacacatttaagttt-attggtgtga-ttttgagtccgaattcac 37282502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 3189503 - 3189708
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||| |||    
T  3189503 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattg 3189602  T
Q  107 ctgct--------------gcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccg 191  Q
     || |              || |||||| ||||||| |||||||||||||||||||| ||||| | || |||||||  |||||||||| ||||| |||||    
T  3189603 ttgttttattattgttgttgcttgtgttcactttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtga-ttttgtgtccg 3189701  T
Q  192 aattcac 198  Q
    |||||||    
T  3189702 aattcac 3189708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 3198320 - 3198525
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||| |||    
T  3198320 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattg 3198419  T
Q  107 ctgct--------------gcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccg 191  Q
     || |              || |||||| ||||||| |||||||||||||||||||| ||||| | || |||||||  |||||||||| ||||| |||||    
T  3198420 ttgttttattattgttgttgcttgtgttcactttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtga-ttttgtgtccg 3198518  T
Q  192 aattcac 198  Q
    |||||||    
T  3198519 aattcac 3198525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 3207159 - 3207364
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||| |||    
T  3207159 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattg 3207258  T
Q  107 ctgct--------------gcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccg 191  Q
     || |              || |||||| ||||||| |||||||||||||||||||| ||||| | || |||||||  |||||||||| ||||| |||||    
T  3207259 ttgttttattattgttgttgcttgtgttcactttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtga-ttttgtgtccg 3207357  T
Q  192 aattcac 198  Q
    |||||||    
T  3207358 aattcac 3207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 202
Target Start/End: Complemental strand, 13316324 - 13316151
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctgctgcctgtgtttactttga 128  Q
    ||||| ||||| ||||||||||||||| | | ||||||||||||||||||||||| ||||||||| |||||||||||  |  ||| ||  || ||||||     
T  13316324 tctccttttatattttgcttgtggttt-gtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgt 13316226  T
Q  129 tattggttactactttccttttctccacaaattatagtttc--attggtgtgagttttgagtcc-gaattcacaaca 202  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||  |||||||||| ||||||| || ||||||||||||    
T  13316225 tattgattactactttcctttgctccacacattata-tttcgtattggtgtga-ttttgagaccggaattcacaaca 13316151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 8870695 - 8870581
Alignment:
Q  35 ctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgatattgg 134  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||  |||||||| || || || ||| |  ||| |||| ||||||||||| | |    
T  8870695 ctttatcttttgcttgtggttttgtatttttcactttgattcctagatttgatctaggttttttttttattgtttttgcttgtgattactttgatactag 8870596  T
Q  135 ttactactttccttt 149  Q
    |||||||||||||||    
T  8870595 ttactactttccttt 8870581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 51765595 - 51765670
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||| |||||||| |||||||||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  51765595 tctccttttatcttgtgcttgtggttt-gtgcttttcactttgtttcctagattagatctaggtgttgttattgttg 51765670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3460858 - 3460915
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttg 58  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||| |||||||||||    
T  3460858 taaacatttcttaatgtgtttgtttctcttctctctttatcttttgtttgtggttttg 3460915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 2262979 - 2262850
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||||||||| ||||||||| ||||||| ||||| |||||| |||||| |||| | ||||||| |||||||||| |||| || | |||  |||||    
T  2262979 taaacatttcttggtatgtttgtttttcttctctcttta-cttttgtttgtggatttgggtttttcac-ttgattcctaaattagatttgggt-atgtta 2262883  T
Q  101 ttgttgctgctgcctgtgtttactttgatattg 133  Q
    |||||| |||||| | |  ||||||||||||||    
T  2262882 ttgttgttgctgcttattgttactttgatattg 2262850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36683842 - 36683892
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgt 51  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  36683842 taaacatctcttggtgtgtttgtttgtcttctctctttatcttttgcttgt 36683892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 44646810 - 44646667
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    |||| |||| |||||| |||||||||||||    |||||||||||||||||| ||||| |||||||||||| ||| |||  ||| || ||||| ||||||    
T  44646810 taaatattttttggtgcgtttgtttctcttt---ctttatcttttgcttgtgattttgtgcttttcacttt-atttctatgttagatttaggt-ttgtta 44646716  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttt 149  Q
    || ||| || ||| || | || | || ||||||||||||||||||||||    
T  44646715 tttttggtgttgcttgaggtttcattaatattggttactactttccttt 44646667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16914181 - 16914118
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttt 64  Q
    |||||| ||||  |||||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  16914181 taaacaattctatgtgtgtttgtgtctcttctctctttatcttttgcttgcggttttgtgcttt 16914118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 44650168 - 44650025
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    |||| |||| |||||| |||||||||||||    |||||||||||||||||| ||||| |||||||||||| ||| |||  ||| || ||||| ||||||    
T  44650168 taaatattttttggtgcgtttgtttctcttt---ctttatcttttgcttgtgattttgtgcttttcacttt-atttctatgttagatttaggt-ttgtta 44650074  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttt 149  Q
    || ||| || ||| || | || | || ||||||||||||||||| ||||    
T  44650073 tttttggtgttgcttgaggtttcattaatattggttactacttttcttt 44650025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 36683894 - 36683932
Alignment:
Q  119 tttactttgatattggttactactttccttttctccaca 157  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  36683894 tttactttgatattggttaccactttcctttgctccaca 36683932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 7e-61; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 538197 - 538387
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||| ||| ||     
T  538197 ttggtgtgtttctttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctagatgttgttattattgttgt 538296  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaa 200  Q
    ||| |||||||||||||| |||||||| ||||||||||| ||||||| || |||||||  |||||||||||||||||||| ||||||||||    
T  538297 tgcttgtgtttactttgaaattggttattactttcctttgctccacacatcatagtttatattggtgtgagttttgagtctgaattcacaa 538387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 30 - 203
Target Start/End: Complemental strand, 42426208 - 42426034
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgat 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| || ||| |||||| ||||||||    
T  42426208 tctccctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgatgttgcttgtgttcactttgat 42426109  T
Q  130 attggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
    |||||||||||||||| ||| ||||||| || |||||||  ||| ||||||||||||||| ||||||||||||||    
T  42426108 attggttactactttcttttgctccacacatcatagtttgtatttgtgtgagttttgagttcgaattcacaacaa 42426034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 42428403 - 42428228
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgat 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||  || ||| |||||| ||||||||    
T  42428403 tctccctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgttcactttgat 42428304  T
Q  130 attggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaat 204  Q
    |||||||||||||||||||| ||||||| || |||||||  ||||||||||||||||||| ||||||  |||||||    
T  42428303 attggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagttcgaatttccaacaat 42428228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 207
Target Start/End: Complemental strand, 16649827 - 16649630
Alignment:
Q  10 cttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctg 109  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| |||||     
T  16649827 cttggtgtgtttgtttctcttttccgtttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgcta 16649728  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaataac 207  Q
    || | |||||| ||||||||  |||||||||||||||||| ||||||| || |||||||  |||||| ||| |||||||| ||||||||||||| ||||    
T  16649727 ctacttgtgttcactttgattgtggttactactttcctttgctccacacatcatagtttgtattggtatga-ttttgagttcgaattcacaacattaac 16649630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 30682919 - 30682721
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||| |||||||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  30682919 ttggtgtgtttgttcctctcttctctccttttatcttttgcttgtgaatttgtgcttttcactttgattcctagattagatctaggtgttgttattgttg 30682820  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
      |  ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||||||||||||||| |||||||||||    
T  30682819 attattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgtattcacaacaa 30682721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 42927053 - 42927263
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttt------tgcttgtggttttgagcttttcactttgattcctagattaaatctaggtg 94  Q
    |||||||||||||||||||||||||||||| || | ||||||||      |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  42927053 taaacatttcttggtgtgtttgtttctcttatctccttatcttttgcttttgcttgtggttttgagtttttcactttgattcctagattagatctaggtg 42927152  T
Q  95 ttgttattgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaat-tatagtttcattggtgtgagttttgagtccgaa 193  Q
    |||||||||||| || ||| |||||||||||||||||| ||| |||||||||||| ||||||| || | |  |||| ||||| ||| |||||||| ||||    
T  42927153 ttgttattgttgttgttgcttgtgtttactttgatattagttgctactttcctttgctccacacatctttgttttcgttggtatga-ttttgagttcgaa 42927251  T
Q  194 ttcacaacaata 205  Q
    ||||||||||||    
T  42927252 ttcacaacaata 42927263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 533941 - 534129
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||| |||| ||||||||||  ||||||||||||||||||||||||| |||||||||||||| ||||||||      |||||||||||| ||  ||     
T  533941 ttggtgtctttgcttctcttctctttttatcttttgcttgtggttttgagattttcactttgattactagatta------ggtgttgttattattattgt 534034  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttc-attggtgtgagttttgagtccgaattcacaacaat 204  Q
    ||| ||||| |||||||| |||||||||||||||||||| ||||||| || |||||||| |||||||||||||||||||||||||||||||||||    
T  534035 tgcttgtgtctactttgaaattggttactactttcctttgctccacacatcatagtttctattggtgtgagttttgagtccgaattcacaacaat 534129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 28750651 - 28750455
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||| ||||    ||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||||||| |||    
T  28750651 ttggtgtgtttgttcctctcttctctccctttatattttgcttgtggttttgtgcttttcacttggattactagattagatctaggtgttgttattattg 28750552  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
     || ||| |||||||||||| | |||||||||||||||||||| ||||||| || ||| |||  ||||||||||||||||||||| |||||||||||    
T  28750551 ttgttgcttgtgtttactttaaaattggttactactttcctttgctccacacatcataatttgtattggtgtgagttttgagtccaaattcacaaca 28750455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 13239924 - 13240118
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||||| | |||||||||||||| |||||||| |||||||||||||||||||||    
T  13239924 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattgttg 13240023  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaac 201  Q
     || ||| |||||||||||| | |||||||||||||||||||| ||||||| || |||||||  ||| |||||| |||||||| ||||||||||||    
T  13240024 ttgttgcttgtgtttactttaaaattggttactactttcctttactccacacatcatagtttgtattagtgtga-ttttgagttcgaattcacaac 13240118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 202
Target Start/End: Complemental strand, 8565945 - 8565748
Alignment:
Q  9 tcttggtgtgtttgttt-ctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgt---tattgt 104  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||   |||| |    
T  8565945 tcttggtgtgtttgttttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattat 8565846  T
Q  105 tgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    || || ||| |||||| |||||| ||||||||||||||||||||| ||||||| || |||||||  ||| |||||| |||||| ||| |||||||||||    
T  8565845 tgttgttgcttgtgttcactttgttattggttactactttcctttgctccacacatcatagtttatattagtgtga-ttttgaatccaaattcacaaca 8565748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 5887430 - 5887234
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgctt--gtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||  |||| |||||||||||||||  |||||||| || |||||| ||||||| |||||||| || |||||||||||||| |||    
T  5887430 ttggtgtgtttgtttctctcttctctctttatcttttgcttttgtggttttaagtttttcattttgattactagattagatttaggtgttgttattattg 5887331  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
     || ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||  |||||||||| |||||||||||||||||||||||    
T  5887330 ttgttgcttgtgttcactttgatattggttactactttcctttgctccacatatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 5887234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 32636996 - 32637190
Alignment:
Q  11 ttggtgtgtttgtttctctt----ctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||     ||||||||||||| |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||| |||    
T  32636996 ttggtgtgtttgtttctctcttccctccctttatcttgtgcttgtgattttgagtttttcactttgattactagattagatctaggtgttgttattattg 32637095  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaa 200  Q
     || ||| |||||||| | ||| ||| |||||||||||||||| ||||||| || |||||||  ||||||||||||||||| |||||||||||||    
T  32637096 atgttgcttgtgtttagtgtgaaatttgttactactttcctttactccacacatcatagtttgtattggtgtgagttttgaatccgaattcacaa 32637190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 202
Target Start/End: Original strand, 19806558 - 19806729
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgat 129  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||||||||||| |||||  ||||| |||| ||||| |     
T  19806558 tctccctttatcttttgcttgtggtttttagcttttcactttgattactagattagatttaggtgttgttattattgctattgcctatgttcactttaaa 19806657  T
Q  130 attggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    |||||||||||||||||||| | ||||| || |||||||  ||||  |||||||||||||||||||||||||||    
T  19806658 attggttactactttcctttgccccacacatcatagtttgtattg--gtgagttttgagtccgaattcacaaca 19806729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 13488406 - 13488569
Alignment:
Q  40 tcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgctgcctgtgtttactttgatattggttact 139  Q
    ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||  ||  |||||| ||||||| |||||||| |    
T  13488406 tcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgctattgattgtgttcactttgaaattggttatt 13488505  T
Q  140 actttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    |||||||||| ||||||| || ||| |||  ||||||||||| |||||||||||||||||||||    
T  13488506 actttcctttactccacacatcatattttgtattggtgtgagatttgagtccgaattcacaaca 13488569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 202
Target Start/End: Complemental strand, 39468522 - 39468348
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgct-gcctgtgtttactttga 128  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||| |  | |  |||||| |||||||    
T  39468522 tctccctttatcttgtgctcgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattgtttgtgttcactttga 39468423  T
Q  129 tattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||||||||||||||||||||| ||||||| || |||||||  |||||||| |||||||||| |||||||||||||    
T  39468422 tattggttactactttcctttgctccacacatcatagtttgtattggtgtaagttttgagttcgaattcacaaca 39468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 31183143 - 31183342
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttg-----cttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattg 103  Q
    |||||||||||||||||||  |||| ||||||||||||     ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||     
T  31183143 ttggtgtgtttgtttctctcttctctctttatcttttgaattgcttgtggttttgagcttttcactttgattactagattagatataggtgttgttatta 31183242  T
Q  104 ttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    ||  || ||| ||||||  |||||||||| |||||||||||||||| ||||||| || || ||||  |||||||||| ||||||||||||||||||||||    
T  31183243 tttttgttgcttgtgttccctttgatattagttactactttcctttgctccacacatcatggtttgtattggtgtga-ttttgagtccgaattcacaaca 31183341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 33831852 - 33832046
Alignment:
Q  11 ttggtgtgtttgtttctct--tctccctttatcttttgcttgtggttttgagctttt-cactttgattcctagattaaatctaggtgttgttattgttgc 107  Q
    ||||||| |||||||||||  |||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||| || ||||||||     
T  33831852 ttggtgtttttgtttctctcttctctctttatcttttgcttgtggctttgagctttttcactttgattcctagattagatttaggtgctgctattgttgt 33831951  T
Q  108 tgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaaca 202  Q
    |  ||| |||||| |||||||| ||||||||||||||||||| ||||||| || |||||||  ||| |||| | ||||||||||||||||||||||    
T  33831952 tattgcttgtgttcactttgattttggttactactttcctttgctccacacatcatagtttgtatttgtgt-aattttgagtccgaattcacaaca 33832046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 16452242 - 16452398
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctc--cctttatctttt-gcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttg 97  Q
    ||||||||||||||||||||||||| |||||||  ||||||| |||| |||||||||||||||||||||| |||||||||||||||| |||||  |||||    
T  16452242 taaacatttcttggtgtgtttgtttatcttctcttcctttatttttttgcttgtggttttgagcttttcaatttgattcctagattagatctaactgttg 16452341  T
Q  98 ttattgttgctgctgcctgtgtttactttgatattggttactactttccttttctccaca 157  Q
    ||||||||| ||||   ||||||||| || ||||||||||||| |||||||| |||||||    
T  16452342 ttattgttgttgct---tgtgtttacgttaatattggttactattttcctttactccaca 16452398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 168
Target Start/End: Original strand, 37439314 - 37439474
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    |||||||||||||| |||||||||||||| |||||||| ||||||| |||||||| | ||||||||||||||| |||    
T  37439314 ttggtgtgtttgtttctctcttctctccctttatcttatgcttgtggttttgtgcttttcattttgattactagattagacctaggtgttgttattattg 37439413  T
Q  107 ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
     || ||| |||||||||||||| |||||||||||| ||| ||| ||||||| || |||||||    
T  37439414 ttgttgcttgtgtttactttgaaattggttactac-ttcttttgctccacacatcatagttt 37439474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 13343237 - 13343393
Alignment:
Q  15 tgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg-ctg 109  Q
    |||||||||||||||    ||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||  |     
T  13343237 tgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgttgttattgttgatta 13343335  T
Q  110 ctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtt 167  Q
     ||| ||  || |||||| ||||||||||||||||||||| ||||||| || ||||||    
T  13343336 ttgcttgcattcactttgttattggttactactttcctttgctccacacatcatagtt 13343393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 30182761 - 30182959
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| |||||||| |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  30182761 ttggtgtgtttgtttctctcttctctccttttatcttgtgcttgtg-ttttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttg 30182859  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtcc-gaattcacaacaa 203  Q
      |  ||  ||  || |||||| ||||||||||||||||||||| ||||||| || |||||||   ||||||||| ||||||| || |||||||||||||    
T  30182860 attattgtttgcattcactttgttattggttactactttcctttgctccacacatcatagtttgttttggtgtga-ttttgagaccggaattcacaacaa 30182958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 36074038 - 36073877
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||| ||||||||||| ||| | ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  36074038 ttggtgtgtttgtttctctcttctctccttttatgttttgcttgtgattt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttg 36073940  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      |  ||| ||  || |||||| ||||||||| ||||||||||| ||||||| || |||||||    
T  36073939 attattgcttgcattcactttgttattggttattactttcctttgctccacacatcatagttt 36073877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 25412933 - 25413093
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||||||||||||||    ||||| ||||||||||||||||||||| | ||||||| ||||||||||||||||| || |||||| |||||||||||    
T  25412933 ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatataggtgctgttattgttg 25413031  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtt 167  Q
      |  ||| |||| | |||| ||||||| |||||| |||||||| ||||||| || ||||||    
T  25413032 attattgcttgtgctcacttggatattgattactaatttcctttgctccacacatcatagtt 25413093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 3075629 - 3075545
Alignment:
Q  123 ctttgatattggttactactttccttttctccacaaattatagtttc-attggtgtgagttttgagtccgaattcacaacaataa 206  Q
    ||||||||||||||| ||||||||||| ||||||| || |||||||  ||||||||||||||| |||||||||||||||||||||    
T  3075629 ctttgatattggttattactttcctttgctccacacatcatagtttgtattggtgtgagtttttagtccgaattcacaacaataa 3075545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 13695696 - 13695493
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattccta-gattaaatctaggtgttgtt 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||| | ||||    |||||| |||   ||| |||||||| |||||    
T  13695696 taaacatttcttggtgtgtttgtttctcttctctctttatcctttgcttgttgttttgtgttttttcgcttgattactactgttagatctaggt-ttgtt 13695598  T
Q  100 attgttgctgctgcctgtgtttactttg--atattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattca 197  Q
    ||||||| || |||||| | ||||||||  |||||||| ||| ||||||||| ||||| | | ||||  || ||  |||||| ||||||| |||||||||    
T  13695597 attgttgttgttgcctgaggttactttgatatattggtaacttctttcctttgctccataca-tataagtttatgtgtgtga-ttttgagaccgaattca 13695500  T
Q  198 caacaat 204  Q
    |||||||    
T  13695499 caacaat 13695493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 9049348 - 9049209
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||| ||||||||||||||||||||||      |||||||||||||||||||| | |||||||||  ||| ||| |||| || ||| | ||||||    
T  9049348 taaacattttttggtgtgtttgtttctcttct------atcttttgcttgtggttttgtgtttttcactta-atttctatattagatttagat-ttgtta 9049257  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttcctt 148  Q
    |||||| || | | |||| ||||||||||||||||||||| |||||||    
T  9049256 ttgttgttgtttcttgtggttactttgatattggttactattttcctt 9049209  T

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Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 16409675 - 16409750
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||| |||||||| |||||||| ||||  ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  16409675 tctccttttatcttgtgcttgtg-ttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttg 16409750  T

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Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 26178082 - 26178152
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttat 101  Q
    ||||| |||||||| |||||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  26178082 tctccttttatcttgtgcttgtg-ttttatgcttttcactttgattcctagattagatctaggtgttgttat 26178152  T

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Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 26170962 - 26171032
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttat 101  Q
    ||||| |||||||| |||||||| ||||  |||||||| |||||||||||||||| ||||||||||||||||    
T  26170962 tctccttttatcttgtgcttgtg-ttttatgcttttcattttgattcctagattagatctaggtgttgttat 26171032  T

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Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30897575 - 30897657
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagatta 84  Q
    ||||||||||||||||||||||||||| || || || ||||||||||||||| ||||  ||||| ||| ||| |||||||||||    
T  30897575 taaacatttcttggtgtgtttgtttctgttttctctctatcttttgcttgtgattttatgctttacac-ttggttcctagatta 30897657  T

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Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30793298 - 30793340
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatctt 43  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  30793298 taaacatttcttggtgtgtttgtttctctactctctttatctt 30793340  T

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Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 40147578 - 40147610
Alignment:
Q  170 attggtgtgagttttgagtccgaattcacaaca 202  Q
    |||||||||||||||||||||||||||||||||    
T  40147578 attggtgtgagttttgagtccgaattcacaaca 40147610  T

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Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 9299754 - 9299797
Alignment:
Q  9 tcttggtgtgtttgtttctcttctccctttatcttttgcttgtg 52  Q
    |||||||||| || ||||||||||| ||||||||||||||||||    
T  9299754 tcttggtgtgcttatttctcttctctctttatcttttgcttgtg 9299797  T

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Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 3075662 - 3075632
Alignment:
Q  3 aacatttcttggtgtgtttgtttctcttctc 33  Q
    |||||||||||||||||||||||||||||||    
T  3075662 aacatttcttggtgtgtttgtttctcttctc 3075632  T

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Target: scaffold1668 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 1494 - 1301
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||||| |||||||||||| ||||||||| |||||| |||| |      
T  1494 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttatgtttttcactttaattcctagattagatctaggtgctgttatcgttgttat 1395  T
Q  111 tgcctgtgttt-actttgatattggttactactttccttttctccacaaattatag-tttcattggtgtgagttttgagtccgaattcacaaca 202  Q
    | | ||||||| ||||| |||||| ||||||||||||||| ||||||| || |||| ||  |||||||||||||||| || |||||||||||||    
T  1394 tacttgtgtttaactttaatattgattactactttcctttgctccacacatcatagattgtattggtgtgagttttgtgttcgaattcacaaca 1301  T

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Target: scaffold0006 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 149093 - 148914
Alignment:
Q  11 ttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttgctgc 110  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||| || |||||||||||||             
T  149093 ttggtgtatttgtttctcttctctctttatcttttgcttgtggttttgtacttttca-tttgattcctagattagatttaggtgttgttat--------- 149004  T
Q  111 tgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaa 200  Q
    ||| ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||  |||| ||||| ||||||||||||||||||||    
T  149003 tgcttgtgtttactttgatgttggttactactttcctttgctccacacattatagtttgtattgatgtga-ttttgagtccgaattcacaa 148914  T

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Target: scaffold0066 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 20411 - 20215
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgtt- 105  Q
    |||||||||||||| ||||    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||||||||     
T  20411 ttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgtta 20312  T
Q  106 gctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt-cattggtgtgagttttgagtccgaattcacaacaa 203  Q
      |  ||| |||||| ||||||| |||||||||||| ||||||| ||||||| || |||||||  |||||| ||||  |||||||||||||||||||||    
T  20311 attattgcttgtgttcactttgacattggttactaccttcctttgctccacacatcatagtttgtattggtatgag--ttgagtccgaattcacaacaa 20215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 27447 - 27248
Alignment:
Q  1 taaacatttcttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgtta 100  Q
    ||||||||| ||| ||||||| ||||||||||| ||||| |||||||||||||||||| | ||||||||| ||||||||||||   |||| || ||||||    
T  27447 taaacatttattgatgtgtttatttctcttctctctttaccttttgcttgtggttttgtgtttttcactt-gattcctagatttcttctaagt-ttgtta 27350  T
Q  101 ttgttgctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagtttcattggtgtgagttttgagtccgaattcacaa 200  Q
    || ||  |||||| || | ||||||| |||||||||||||||| |||||||||||||  |   ||||| |||| |||||| |||||||||||||||||||    
T  27349 ttatttttgctgcttgaggttactttcatattggttactactt-ccttttctccacacttctaagttt-attgatgtgagatttgagtccgaattcacaa 27252  T

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Target: scaffold0016 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 168
Target Start/End: Original strand, 114775 - 114937
Alignment:
Q  11 ttggtgtgtttgtttctct----tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||| ||||||||||    ||||| |||||||||| ||||| |||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  114775 ttggtgtgcttgtttctctcttctctccttttatctttttcttgttgttttgtgcttttcactttgattcctagattagatataggtgttgttattgttg 114874  T
Q  107 -ctgctgcctgtgtttactttgatattggttactactttccttttctccacaaattatagttt 168  Q
      |  ||  |||||| |||||||||||||||| ||||||||||| ||||||| || |||||||    
T  114875 attattgattgtgttcactttgatattggttattactttcctttgctccacacatcatagttt 114937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 434706 - 434805
Alignment:
Q  11 ttggtgtgtttgtttctct----tctcccttt-atcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgtt 105  Q
    |||||||||||||||||||    ||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  434706 ttggtgtgtttgtttctctcttctctcccttttatcttgtgcttgtg-ttttgtgcttttcactttgattcctagattagatctaggtgctgttattgtt 434804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 8699 - 8630
Alignment:
Q  36 tttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    |||||||| |||||||||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8699 tttatcttgtgcttgtggttt-gtgcttttcactttgtttcctagattagatctaggtgttgttattgttg 8630  T

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Target: scaffold0491; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 11131 - 11056
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||| |||||||| |||||||||||| | | ||||||||||| ||||||||||| |||||||||||||||||||||    
T  11131 tctccttttatcttgtgcttgtggttt-gtgtttttcactttgtttcctagattagatctaggtgttgttattgttg 11056  T

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Target: scaffold1519 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 1112 - 1187
Alignment:
Q  30 tctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattaaatctaggtgttgttattgttg 106  Q
    ||||| |||||  |||||||||||||| | ||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  1112 tctccttttatactttgcttgtggttt-gtgcttttcactttgatacctagattagatctaggtggtgttattgttg 1187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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