View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19505_high_30 (Length: 233)
Name: NF19505_high_30
Description: NF19505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19505_high_30 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 46460688 - 46460901
Alignment:
| Q |
1 |
gtcatagttgtcaggtgttataagtaacagactgacagtagttagttaggaggtagttaggaggagggaaaggttgttgcaagggagtctcagtttatta |
100 |
Q |
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| T |
46460688 |
gtcatagttgtcaggtgttataagtaacagactgacagtagttagttaggaggtagttaggaggagggaaaggttgttgcaagggagtctcagtttatta |
46460787 |
T |
|
| Q |
101 |
attggagagtttgatagagagaaggcatcttttgtcaagtaatagttgaatgggagattgcgttttcctcaaactatttgtgagttcattgaatttcaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46460788 |
attggagagtttgatagagagaaggcatcttttgtcaagtaatagttgaatgggaggttgcgttttcctcaaactatttgtgagttcattgaatttcaac |
46460887 |
T |
|
| Q |
201 |
aataaagattatat |
214 |
Q |
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|||||||||||||| |
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| T |
46460888 |
aataaagattatat |
46460901 |
T |
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