View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19507_high_33 (Length: 262)
Name: NF19507_high_33
Description: NF19507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19507_high_33 |
 |  |
|
| [»] scaffold0867 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 9680156 - 9680385
Alignment:
| Q |
16 |
atgatcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcggttgcgaaagattc |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9680156 |
atgatcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagctacatcggttgcgaaagattc |
9680255 |
T |
 |
| Q |
116 |
gaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagt |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9680256 |
gaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagt |
9680355 |
T |
 |
| Q |
216 |
ttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
9680356 |
ttttggaagaggattggtgaagcttataac |
9680385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 5187935 - 5188164
Alignment:
| Q |
16 |
atgatcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcggttgcgaaagattc |
115 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||||||| ||||||| |||| | ||| || ||||||||||||| ||| || |||| ||| ||| |
|
|
| T |
5187935 |
atgatcaagagcttgaaacatcacaagtttgcactcaaggtggcttggaaactattaacattaatgaagaagttggaactacgtcagttgtgaacacttc |
5188034 |
T |
 |
| Q |
116 |
gaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagt |
215 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| | ||||||||||||||||||| |
|
|
| T |
5188035 |
gaaagtaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaagatccgattgttgggattgatcaaagaggagatagt |
5188134 |
T |
 |
| Q |
216 |
ttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
|||| |||||| |||||||||||||||||| |
|
|
| T |
5188135 |
ttttagaagagaattggtgaagcttataac |
5188164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 244
Target Start/End: Complemental strand, 13659168 - 13658944
Alignment:
| Q |
20 |
tcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcggttgcgaaagattcgaaa |
119 |
Q |
| |
|
||||||| ||||||||||||| ||||| ||||| |||||||||||| | ||| |||||||| ||| ||||| |||| ||||| || | ||| |
|
|
| T |
13659168 |
tcaagagtctgaaacaccacaattttgcattcaaggtggcttgaaaactattaaccttggtgaggaaattggacccacataggttgtaaataccccaaaa |
13659069 |
T |
 |
| Q |
120 |
acaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagttttt |
219 |
Q |
| |
|
|||||||| |||| |||| ||| || | ||||||||||||| |||||| |||| ||| |||||||||||| || |||| ||| |||||||| ||||| |
|
|
| T |
13659068 |
acaagattgcaactaaagaagggtggagttctcattcaatcctggctcgctattccaatggatccaattgtcgggcttgataaaaaaggagataattttt |
13658969 |
T |
 |
| Q |
220 |
ggaagaggattggtgaagcttataa |
244 |
Q |
| |
|
||||||||||| | |||||||||| |
|
|
| T |
13658968 |
cgaagaggattgattaagcttataa |
13658944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 244
Target Start/End: Complemental strand, 13717810 - 13717586
Alignment:
| Q |
20 |
tcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcggttgcgaaagattcgaaa |
119 |
Q |
| |
|
||||||| ||||||||||||| ||||| ||||| |||||||||||| | ||| |||||||| ||| ||||| |||| ||||| || | ||| |
|
|
| T |
13717810 |
tcaagagtctgaaacaccacaattttgcattcaaggtggcttgaaaactattaaccttggtgaggaaattggacccacataggttgtaaataccccaaaa |
13717711 |
T |
 |
| Q |
120 |
acaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagttttt |
219 |
Q |
| |
|
|||||||| |||| |||| ||| || | ||||||||||||| |||||| |||| ||| |||||||||||| || |||| ||| |||||||| ||||| |
|
|
| T |
13717710 |
acaagattgcaactaaagaagggtggagttctcattcaatcctggctcgctattccaatggatccaattgtcgggcttgataaaaaaggagataattttt |
13717611 |
T |
 |
| Q |
220 |
ggaagaggattggtgaagcttataa |
244 |
Q |
| |
|
||||||||||| | |||||||||| |
|
|
| T |
13717610 |
cgaagaggattgattaagcttataa |
13717586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 19793041 - 19792812
Alignment:
| Q |
16 |
atgatcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcggttgcgaaagattc |
115 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||||| |||| |||||| |||||||| || |
|
|
| T |
19793041 |
atgatcaagagattgaaacatcacaaccttgcactcaagatggcttggaaacaattaatctttgtgaagaagtcggagctacatcagttgcgaattcttt |
19792942 |
T |
 |
| Q |
116 |
gaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagt |
215 |
Q |
| |
|
||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
19792941 |
gaaaacaagatttcaaccagaagagggtgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttgggaatgatcaaagatgagatagt |
19792842 |
T |
 |
| Q |
216 |
ttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |
|
|
| T |
19792841 |
ttttggaagaggattggtaaagcttataac |
19792812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 158; Significance: 4e-84; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 32603638 - 32603409
Alignment:
| Q |
16 |
atgatcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcggttgcgaaagattc |
115 |
Q |
| |
|
|||||||||| |||||| || ||||||||||||||||||||||| || |||||| ||||||| |||||||||| |||| ||||||||||||||| || |
|
|
| T |
32603638 |
atgatcaagatattgaagcatcacaaccttgcactcaagatggcatggaaacaattaatctttgtgaagaagtcggagctacatcggttgcgaatacttt |
32603539 |
T |
 |
| Q |
116 |
gaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagt |
215 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||| |
|
|
| T |
32603538 |
gaaaacaagatttcaaccaaaagaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttgggaatggtcaaagaggaggtagt |
32603439 |
T |
 |
| Q |
216 |
ttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |
|
|
| T |
32603438 |
ttttggaagaggattggtgaagtttataac |
32603409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 115 - 245
Target Start/End: Complemental strand, 23562910 - 23562780
Alignment:
| Q |
115 |
cgaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatag |
214 |
Q |
| |
|
|||||| |||||| |||||||| ||||||||||||||||||||||||||| |||| ||||||||||| | ||||||||| |||||||| ||||||| | |
|
|
| T |
23562910 |
cgaaaataagattccaaccaaacgaggatgaacttctcattcaatcatggttcaacatttcaaaggactcgattgttggagttgatcaaaaaggagattg |
23562811 |
T |
 |
| Q |
215 |
tttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |
|
|
| T |
23562810 |
tttttggaagaggattagtgaagcttataac |
23562780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 16560908 - 16560835
Alignment:
| Q |
148 |
ttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagtttttgg |
221 |
Q |
| |
|
|||| |||||| |||| |||||||||||||||||||| ||||| |||||||||||| || ||| | ||||||| |
|
|
| T |
16560908 |
ttcttattcaaacatgactcaatatttcaaaggatcctattgtgagaaatgatcaaaaagcagaaattttttgg |
16560835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 19698059 - 19697827
Alignment:
| Q |
16 |
atgatcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcg----gttgcgaaag |
111 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||||| |||| ||||||| |||||||| |
|
|
| T |
19698059 |
atgatcaagagattgaaacgtcacaaccttgcactcaagatggcttggaaacaattaatctttgtgaagaagtcggagctacatcgatcggttgcgaata |
19697960 |
T |
 |
| Q |
112 |
attcgaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggaga |
211 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19697959 |
ctttgaaaacaagatttcaaccaaaagaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttgggaatgatcaaagaggaga |
19697860 |
T |
 |
| Q |
212 |
tagtttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| |
|
|
| T |
19697859 |
tag-ttttggaagaggattggtgaagcttataac |
19697827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 19697728 - 19697685
Alignment:
| Q |
202 |
aaagaggagatagtttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19697728 |
aaagaggagatagtttttggaagaggattggtgaagcttataac |
19697685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0867 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0867
Description:
Target: scaffold0867; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 463 - 692
Alignment:
| Q |
16 |
atgatcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcggttgcgaaagattc |
115 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||| ||||||| |||| | ||| ||| |||||||||| || ||||||||||||||| ||| |
|
|
| T |
463 |
atgatcaagagcttgaaacaccacaagtttgcactcaaggtggcttggaaactattaaccttaatgaagaagttagaactacatcggttgcgaatacttc |
562 |
T |
 |
| Q |
116 |
gaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagt |
215 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
563 |
aaaagtaagatttcaaccaaaggaggatgaacttctcattcaatcatggcttaatatttcaaaggatccaattgttgggattgatcaaagaggagatagt |
662 |
T |
 |
| Q |
216 |
ttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
||||||||||||||| |||||||||||||| |
|
|
| T |
663 |
ttttggaagaggattagtgaagcttataac |
692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 22243825 - 22244054
Alignment:
| Q |
16 |
atgatcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcggttgcgaaagattc |
115 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||| ||||||| |||| | ||| ||| |||||||||| || ||||||||||||||| ||| |
|
|
| T |
22243825 |
atgatcaagagcttgaaacaccacaagtttgcactcaaggtggcttggaaactattaaccttaatgaagaagttagaactacatcggttgcgaatacttc |
22243924 |
T |
 |
| Q |
116 |
gaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagt |
215 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
22243925 |
aaaagtaagatttcaaccaaaggaggatgaacttctcattcaatcatggcttaatatttcaaaggatccaattgttgggattgatcaaagaggagatagt |
22244024 |
T |
 |
| Q |
216 |
ttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
||||||||||||||| |||||||||||||| |
|
|
| T |
22244025 |
ttttggaagaggattagtgaagcttataac |
22244054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 9217212 - 9216988
Alignment:
| Q |
18 |
gatcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcggttgcgaaagattcga |
117 |
Q |
| |
|
||||||||| |||||| |||||| ||||||||||| |||||| |||| | ||| ||| | ||||| ||| | || |||| ||| ||| |||||| |
|
|
| T |
9217212 |
gatcaagagcttgaaataccacatgtttgcactcaaggtggctttgaaactattaaccttaataaagaaattgaaactatatcgattgtgaataattcga |
9217113 |
T |
 |
| Q |
118 |
aaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagttt |
217 |
Q |
| |
|
|| ||||||||||| ||||||||||| ||||| |||||||| ||| |||||||||||||||||||| | |||| ||||||||||| || || ||||| |
|
|
| T |
9217112 |
aagtaagatttcaacgaaaggaggatggacttcccattcaattatgactcaatatttcaaaggatccgaatgttaaaaatgatcaaaaag--gacagttt |
9217015 |
T |
 |
| Q |
218 |
ttggaagaggattggtgaagcttataa |
244 |
Q |
| |
|
||||||||| |||| |||||||||||| |
|
|
| T |
9217014 |
ttggaagagaattgatgaagcttataa |
9216988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 43787912 - 43787837
Alignment:
| Q |
146 |
acttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagtttttgg |
221 |
Q |
| |
|
|||||| |||||| |||| | |||||||||||| ||||| ||||| ||||||||||||| || ||| || |||||| |
|
|
| T |
43787912 |
acttcttattcaaacatgacacaatatttcaaaagatcctattgtgggaaatgatcaaaaagcagaaagattttgg |
43787837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 122 - 245
Target Start/End: Original strand, 8321950 - 8322073
Alignment:
| Q |
122 |
aagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagtttttgg |
221 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||| |
|
|
| T |
8321950 |
aagatttcaaccaaaggaggataaacttctcattcaatcatggctcaatatttcaaaggatccaattgatgagattgatcaaagaggagatagtttttgg |
8322049 |
T |
 |
| Q |
222 |
aagaggattggtgaagcttataac |
245 |
Q |
| |
|
| ||| ||||||||||| |||||| |
|
|
| T |
8322050 |
atgagaattggtgaagcctataac |
8322073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 19991898 - 19992127
Alignment:
| Q |
16 |
atgatcaagagattgaaacaccacaaccttgcactcaagatggcttgaaaacaaataatcttggtgaagaagttggagttacatcggttgcgaaagattc |
115 |
Q |
| |
|
|||||||||||| | ||||||| || |||||||||||| ||||||| |||| | ||||||| ||||||| ||||| || || |||||| ||| | |
|
|
| T |
19991898 |
atgatcaagagacttcaacaccaaaatcttgcactcaaggtggcttggaaactataaatcttgatgaagaaattggatttgcaccggttgtaaaaacgcc |
19991997 |
T |
 |
| Q |
116 |
gaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagt |
215 |
Q |
| |
|
||||| |||||| |||||||| |||||| |||||||||||||||||||| |||| ||||||||||| | ||||||||| |||||||| ||||||| || |
|
|
| T |
19991998 |
gaaaataagattccaaccaaatgaggattaacttctcattcaatcatggttcaacatttcaaaggactcgattgttggagttgatcaaaaaggagattgt |
19992097 |
T |
 |
| Q |
216 |
ttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
||||||||||||||| |||||||||||||| |
|
|
| T |
19992098 |
ttttggaagaggattagtgaagcttataac |
19992127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 46822685 - 46822718
Alignment:
| Q |
16 |
atgatcaagagattgaaacaccacaaccttgcac |
49 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |
|
|
| T |
46822685 |
atgatcaagagattgaaacaccgcaaccttgcac |
46822718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 245
Target Start/End: Original strand, 31071850 - 31071980
Alignment:
| Q |
115 |
cgaaaacaagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatag |
214 |
Q |
| |
|
|||||| |||||| |||||||| |||||||||| ||| |||||||||||| |||| ||||||||||| | |||||||| | |||||||| ||||||||| |
|
|
| T |
31071850 |
cgaaaataagattccaaccaaacgaggatgaacgtcttattcaatcatggttcaacatttcaaaggactcgattgttgggattgatcaaaaaggagatag |
31071949 |
T |
 |
| Q |
215 |
tttttggaagaggattggtgaagcttataac |
245 |
Q |
| |
|
||||||||||| |||| |||||||||||||| |
|
|
| T |
31071950 |
tttttggaagaagattagtgaagcttataac |
31071980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 245
Target Start/End: Original strand, 42246322 - 42246445
Alignment:
| Q |
122 |
aagatttcaaccaaaggaggatgaacttctcattcaatcatggctcaatatttcaaaggatccaattgttggaaatgatcaaagaggagatagtttttgg |
221 |
Q |
| |
|
|||||||||||| ||||| ||||| || | || |||||||||||||| |||| |||||||||||||||||| |||| ||| |||||||||||| |
|
|
| T |
42246322 |
aagatttcaaccgaaggataatgaagttgtgatgcaatcatggctcaacatttgaaaggatccaattgttggggttgataaaaagatagatagtttttgt |
42246421 |
T |
 |
| Q |
222 |
aagaggattggtgaagcttataac |
245 |
Q |
| |
|
| |||||||||||||||||||||| |
|
|
| T |
42246422 |
atgaggattggtgaagcttataac |
42246445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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