View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19507_low_2 (Length: 646)
Name: NF19507_low_2
Description: NF19507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19507_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 586; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 586; E-Value: 0
Query Start/End: Original strand, 19 - 636
Target Start/End: Original strand, 10434370 - 10434987
Alignment:
| Q |
19 |
aagattcatgtttttgagctcctaaccccctttggagctctcaacttctcaagtgtgatttccaaaccaacttgtttgatcacttctaatcaaacatgat |
118 |
Q |
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| T |
10434370 |
aagattcatgtttttgagctcctaaccccctttggagctctcaacttctcaagtgtgatttccaaaccaacttgtttgatcacttctaatcaaacatgat |
10434469 |
T |
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| Q |
119 |
tttacttctgagacgatgttagaccgaaaagtgaacaactataattttggtgttacattggaaatttcatactaaaccatactactaacttgtttttgaa |
218 |
Q |
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| T |
10434470 |
tttacttctgagacgatgttagaccgaaaagtgaacaactataattttggtgttacattggaaatttcatactaaaccatactactaacttgcttttgaa |
10434569 |
T |
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| Q |
219 |
ataaaaaatttcaaacataaatcgttttactacaaagtaacattcaattaggatcaaaattgcaaaattaagttcatcgaacattcttcatagttcattt |
318 |
Q |
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| T |
10434570 |
ataaaaaaattcaaacataaatcgttttactacaaagtaacattcaattaggatcaaaattgcaaaatcaagttcatcgaacactcttcatagttcattt |
10434669 |
T |
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| Q |
319 |
gagttttgctgatcctagctgagagttggaggatggaaggggaataggccaacagggtaccttgttatatagcgtagatcgcaatcattacaaagggagt |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
10434670 |
gagttttgctgatcctagctgagagttggaggatggaaggggaataggccaacaaggtaccttgttatatagcgtagatcgcaatcattacaaagagagt |
10434769 |
T |
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| Q |
419 |
aatttgaacagacatagaaagcatagctacattactaaccttattgtcctgaaaaaccagctcaatatcagagagatcttgttgggcttctaatattgct |
518 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10434770 |
aatttgaacagacatagaaagcatagctacattactaaccttattgtcctgaaaaaccagctcaatatcagagagatcttgttgggcttctaatattgct |
10434869 |
T |
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| Q |
519 |
ttcaatgaaggaatcacatcctcctccatcatctgaggtaaaggcttaactggagctttagcaggagtcttctttactgcttctgcttttggagcttctt |
618 |
Q |
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| T |
10434870 |
ttcaatgaaggaatcacatcctcctccatcatctgaggtaaaggcttaactggagctttagcaggagtcttctttactgctgctgcttttggagcttctt |
10434969 |
T |
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| Q |
619 |
cttttacctcctcctttg |
636 |
Q |
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| T |
10434970 |
cctttacctcctcctttg |
10434987 |
T |
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