View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19507_low_32 (Length: 266)
Name: NF19507_low_32
Description: NF19507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19507_low_32 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 266
Target Start/End: Complemental strand, 51945380 - 51945125
Alignment:
| Q |
11 |
cacagatgagaacaaatagtatattcagtttattctagaagatggcaacggaaatcattaatgtattagacgattctcacatatacaaatccacattaaa |
110 |
Q |
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| T |
51945380 |
cacacatgagaacaaatagtatattcagtttattctagaagatggcaacggaaatcattaatgtattagacgattctcacatatacaaatccacattgaa |
51945281 |
T |
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| Q |
111 |
cctaaccgatgattaagtaattaaattaaactaaaggttaaagtagatggaggtcctcgattcggataaatatcaatctaacaactaactaactactatc |
210 |
Q |
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||||||| |||||||||||| | ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||| |||||| |
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| T |
51945280 |
cctaaccaatgattaagtaactggattaaactaaaggttaaagtagatgaaggtccataattcgaataaatatcaatctaacaactaactaacaactatc |
51945181 |
T |
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| Q |
211 |
atttgccaccaaaacaaattccataataacacccaaaaatatccacattgaaccat |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51945180 |
atttgccaccaaaacaaattccataataacacccaaaaatatccacattgaaccat |
51945125 |
T |
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