View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19507_low_35 (Length: 256)
Name: NF19507_low_35
Description: NF19507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19507_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 37673184 - 37673423
Alignment:
| Q |
13 |
aaaatttccaataggttcacacttcacagtacataaacaaaatttccattgaggttaaataaaactaggtaaattccaattgaagatgtatggagaatta |
112 |
Q |
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| T |
37673184 |
aaaatttccaataggttcacacttcacagtacataaacaaaatttccattgaggttaaataaaactaggtaaaatccaattgaagatgtatggagaatta |
37673283 |
T |
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| Q |
113 |
gaaccttacaataatagcacaacaaatgtatatctctctttgaatttgattggagagaattacaacact-------------acataaattaattaggaa |
199 |
Q |
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| T |
37673284 |
gaaccttacaataatagcacaacaaatgtatatctctctttgaatttgattggagagaattacaacactaaaataattatcaacataaattaattaggaa |
37673383 |
T |
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| Q |
200 |
tcaacatactccaaatgactggtgaactttgttcatcctg |
239 |
Q |
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| T |
37673384 |
tcaacatattccaaatgactggtgaactttgttcatcctg |
37673423 |
T |
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