View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19508_high_5 (Length: 240)
Name: NF19508_high_5
Description: NF19508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19508_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 43136213 - 43136431
Alignment:
| Q |
8 |
atgcatatgcatacattgattagtattacaatcgtgtggaattactagtatatgaagaaatttctgattttatccgtttgctatattcaaattaatttgt |
107 |
Q |
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| T |
43136213 |
atgcatatgcatacattgattagtattacaatcgtgtggaattactagtatatgaagaaatttctgattctatccgtttgctatattcacattaatttgt |
43136312 |
T |
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| Q |
108 |
ttagctaatgtcacgaatgaatatatgtttagtgactataatcatgaaattgtagaatcaagcatgtgcgatttaaattaagactcggttcattgattca |
207 |
Q |
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| T |
43136313 |
ttagctaatgtcacgaatgaatatatgtttagtgactataatcatgaaattgtagaatcaagcatgtgcgatttaaattaagactcggttcattgattca |
43136412 |
T |
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| Q |
208 |
ttatataaatactaagcac |
226 |
Q |
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| T |
43136413 |
ttatacaaatactaagcac |
43136431 |
T |
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