View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1950_high_10 (Length: 262)

Name: NF1950_high_10
Description: NF1950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1950_high_10
NF1950_high_10
[»] chr6 (47 HSPs)
chr6 (19-261)||(3409469-3409711)
chr6 (19-262)||(2377936-2378178)
chr6 (147-262)||(29518857-29518972)
chr6 (22-262)||(10074097-10074336)
chr6 (202-262)||(26544041-26544101)
chr6 (202-262)||(29518495-29518555)
chr6 (202-262)||(32741171-32741231)
chr6 (147-262)||(16107998-16108115)
chr6 (202-262)||(3058218-3058278)
chr6 (202-262)||(3409251-3409311)
chr6 (202-262)||(14748444-14748504)
chr6 (202-262)||(35210196-35210256)
chr6 (178-262)||(2578549-2578634)
chr6 (178-262)||(2579211-2579297)
chr6 (19-117)||(29518685-29518784)
chr6 (177-262)||(10074469-10074553)
chr6 (201-262)||(3415449-3415510)
chr6 (202-262)||(1127352-1127412)
chr6 (210-262)||(2579978-2580030)
chr6 (181-255)||(2579605-2579678)
chr6 (213-262)||(1950291-1950340)
chr6 (216-261)||(9062456-9062501)
chr6 (210-262)||(593815-593867)
chr6 (177-262)||(16454872-16454959)
chr6 (203-262)||(1846741-1846800)
chr6 (215-262)||(32460686-32460733)
chr6 (147-262)||(33605913-33606027)
chr6 (212-262)||(2377756-2377806)
chr6 (19-98)||(2579387-2579468)
chr6 (177-262)||(10073722-10073804)
chr6 (20-109)||(26544232-26544321)
chr6 (177-259)||(35210456-35210527)
chr6 (19-98)||(2578730-2578811)
chr6 (185-259)||(2578944-2579016)
chr6 (212-262)||(5832132-5832182)
chr6 (19-98)||(16107862-16107943)
chr6 (213-262)||(6999902-6999951)
chr6 (177-262)||(8481893-8481978)
chr6 (212-262)||(16107680-16107730)
chr6 (205-262)||(5958709-5958766)
chr6 (210-262)||(10911565-10911618)
chr6 (19-63)||(2579805-2579849)
chr6 (177-262)||(6071098-6071184)
chr6 (216-262)||(2843560-2843606)
chr6 (212-262)||(16454577-16454627)
chr6 (23-63)||(2579042-2579082)
chr6 (19-59)||(16454757-16454797)
[»] chr8 (62 HSPs)
chr8 (19-262)||(1013977-1014220)
chr8 (18-262)||(3669868-3670112)
chr8 (19-262)||(9309163-9309407)
chr8 (161-262)||(18372362-18372463)
chr8 (178-259)||(6731872-6731953)
chr8 (165-254)||(18372485-18372574)
chr8 (161-262)||(18372805-18372905)
chr8 (144-258)||(45121766-45121881)
chr8 (178-262)||(45122972-45123058)
chr8 (161-262)||(18373037-18373139)
chr8 (161-261)||(18371763-18371863)
chr8 (177-261)||(147794-147880)
chr8 (200-262)||(30441071-30441133)
chr8 (201-262)||(3669678-3669739)
chr8 (177-262)||(40518550-40518634)
chr8 (161-262)||(30359558-30359661)
chr8 (181-259)||(6651476-6651552)
chr8 (178-262)||(8918870-8918956)
chr8 (212-262)||(3038396-3038446)
chr8 (188-262)||(34835185-34835261)
chr8 (202-262)||(41416277-41416335)
chr8 (202-262)||(1014351-1014411)
chr8 (210-262)||(45122016-45122068)
chr8 (210-262)||(45122163-45122215)
chr8 (213-262)||(147454-147503)
chr8 (177-262)||(34835439-34835527)
chr8 (177-262)||(34835705-34835793)
chr8 (210-262)||(41972158-41972210)
chr8 (202-261)||(20870680-20870741)
chr8 (212-262)||(25561922-25561972)
chr8 (212-262)||(34834878-34834928)
chr8 (212-262)||(37544596-37544646)
chr8 (210-262)||(6876968-6877021)
chr8 (210-262)||(9608745-9608797)
chr8 (214-262)||(18380123-18380171)
chr8 (212-260)||(33113475-33113523)
chr8 (210-261)||(5420651-5420702)
chr8 (212-262)||(1514021-1514071)
chr8 (188-262)||(9482710-9482784)
chr8 (220-262)||(25561750-25561792)
chr8 (212-262)||(30359273-30359323)
chr8 (161-236)||(43274699-43274776)
chr8 (217-261)||(70381-70425)
chr8 (213-261)||(32640634-32640682)
chr8 (183-262)||(45122604-45122676)
chr8 (23-99)||(147637-147715)
chr8 (212-262)||(18372708-18372758)
chr8 (204-262)||(40579612-40579670)
chr8 (212-261)||(8794113-8794162)
chr8 (177-262)||(4154386-4154472)
chr8 (210-262)||(4154772-4154824)
chr8 (210-262)||(20995507-20995559)
chr8 (215-262)||(20130454-20130501)
chr8 (210-261)||(9308977-9309030)
chr8 (220-262)||(18372100-18372142)
chr8 (213-259)||(43274888-43274934)
chr8 (210-259)||(12283873-12283922)
chr8 (19-68)||(34835057-34835105)
chr8 (212-262)||(40518071-40518123)
chr8 (213-262)||(3037814-3037865)
chr8 (210-242)||(18645713-18645745)
chr8 (214-262)||(43398177-43398225)
[»] chr3 (56 HSPs)
chr3 (19-259)||(22304377-22304618)
chr3 (70-262)||(4823515-4823707)
chr3 (107-262)||(11661846-11662003)
chr3 (177-262)||(22304213-22304298)
chr3 (19-189)||(22303759-22303930)
chr3 (118-261)||(15773099-15773243)
chr3 (19-259)||(41359874-41360112)
chr3 (123-262)||(37990745-37990884)
chr3 (178-262)||(54017922-54018008)
chr3 (202-262)||(39389062-39389122)
chr3 (202-262)||(50612558-50612618)
chr3 (161-262)||(29644687-29644791)
chr3 (178-262)||(21832449-21832532)
chr3 (202-261)||(51886553-51886612)
chr3 (177-255)||(22304061-22304141)
chr3 (177-262)||(32462664-32462752)
chr3 (202-259)||(37726496-37726553)
chr3 (210-262)||(33803358-33803410)
chr3 (210-262)||(43346650-43346702)
chr3 (210-261)||(25739532-25739583)
chr3 (212-262)||(35946524-35946574)
chr3 (177-252)||(42342206-42342283)
chr3 (212-262)||(43346897-43346947)
chr3 (178-242)||(9240118-9240181)
chr3 (210-262)||(31190017-31190069)
chr3 (201-262)||(39935061-39935124)
chr3 (212-260)||(52634678-52634726)
chr3 (148-262)||(3135179-3135293)
chr3 (210-261)||(53577364-53577415)
chr3 (212-262)||(37991083-37991133)
chr3 (210-259)||(8327904-8327953)
chr3 (212-261)||(11661537-11661586)
chr3 (210-262)||(15772854-15772906)
chr3 (210-262)||(29645008-29645060)
chr3 (210-262)||(42342494-42342546)
chr3 (211-262)||(53118080-53118131)
chr3 (19-87)||(53577547-53577616)
chr3 (210-262)||(12114668-12114720)
chr3 (210-262)||(39914252-39914304)
chr3 (210-262)||(54018304-54018356)
chr3 (199-262)||(3384372-3384435)
chr3 (212-259)||(25755396-25755443)
chr3 (212-262)||(3135567-3135617)
chr3 (212-262)||(33175770-33175820)
chr3 (213-262)||(7767420-7767469)
chr3 (212-245)||(45901715-45901748)
chr3 (210-242)||(1634441-1634473)
chr3 (210-242)||(12747878-12747910)
chr3 (212-252)||(32463017-32463057)
chr3 (210-262)||(32589704-32589755)
chr3 (210-242)||(39336355-39336387)
chr3 (220-262)||(42584928-42584970)
chr3 (212-258)||(49336797-49336843)
chr3 (19-98)||(54018093-54018174)
chr3 (172-234)||(2299937-2300000)
chr3 (19-99)||(15773036-15773117)
[»] chr1 (63 HSPs)
chr1 (23-262)||(48588594-48588833)
chr1 (19-261)||(44290565-44290799)
chr1 (19-262)||(3537253-3537495)
chr1 (19-242)||(50051777-50052000)
chr1 (19-262)||(26661628-26661874)
chr1 (19-141)||(48588340-48588462)
chr1 (172-261)||(37556071-37556163)
chr1 (178-262)||(34364891-34364977)
chr1 (147-262)||(41157311-41157427)
chr1 (200-262)||(44290931-44290993)
chr1 (179-262)||(22077601-22077683)
chr1 (201-262)||(45494084-45494146)
chr1 (202-262)||(3550712-3550772)
chr1 (202-262)||(41759475-41759535)
chr1 (202-261)||(50052130-50052189)
chr1 (183-262)||(11977251-11977332)
chr1 (204-262)||(32594822-32594880)
chr1 (202-262)||(3537705-3537765)
chr1 (178-242)||(22077248-22077311)
chr1 (210-262)||(34364507-34364559)
chr1 (210-262)||(41142372-41142424)
chr1 (210-262)||(41184531-41184583)
chr1 (211-262)||(40082408-40082459)
chr1 (212-262)||(17294579-17294629)
chr1 (212-262)||(34649440-34649490)
chr1 (210-262)||(29798199-29798251)
chr1 (210-262)||(45084382-45084434)
chr1 (177-256)||(30630750-30630828)
chr1 (161-262)||(47379891-47379990)
chr1 (192-262)||(50469187-50469256)
chr1 (210-262)||(31767267-31767319)
chr1 (202-262)||(32168798-32168853)
chr1 (210-262)||(37850706-37850758)
chr1 (178-256)||(66200-66278)
chr1 (210-261)||(24600421-24600472)
chr1 (210-257)||(35154150-35154197)
chr1 (207-262)||(38804461-38804516)
chr1 (213-259)||(37555733-37555779)
chr1 (201-251)||(44043895-44043944)
chr1 (210-262)||(66578-66630)
chr1 (210-262)||(5320071-5320123)
chr1 (19-114)||(11977129-11977224)
chr1 (218-262)||(14318875-14318919)
chr1 (210-262)||(24132091-24132143)
chr1 (210-262)||(39066306-39066358)
chr1 (210-262)||(41156991-41157043)
chr1 (210-261)||(4878803-4878854)
chr1 (212-262)||(26662004-26662054)
chr1 (19-102)||(34364689-34364774)
chr1 (210-256)||(44685456-44685502)
chr1 (220-261)||(5528861-5528902)
chr1 (214-262)||(9955911-9955960)
chr1 (210-259)||(21378150-21378199)
chr1 (210-262)||(3875437-3875489)
chr1 (211-259)||(22793279-22793327)
chr1 (216-262)||(5575110-5575156)
chr1 (23-68)||(66399-66444)
chr1 (104-195)||(3537495-3537587)
chr1 (202-262)||(4266888-4266948)
chr1 (210-242)||(19283581-19283613)
chr1 (177-229)||(24448245-24448296)
chr1 (19-63)||(31767094-31767137)
chr1 (147-195)||(41184198-41184246)
[»] chr7 (55 HSPs)
chr7 (23-262)||(14681323-14681562)
chr7 (19-262)||(37533116-37533340)
chr7 (19-262)||(22566768-22567014)
chr7 (123-262)||(7553937-7554077)
chr7 (178-262)||(30244667-30244753)
chr7 (181-262)||(30255308-30255391)
chr7 (178-259)||(30244236-30244319)
chr7 (178-262)||(30245043-30245129)
chr7 (204-262)||(29157559-29157617)
chr7 (210-262)||(1085722-1085774)
chr7 (181-262)||(30245463-30245546)
chr7 (132-207)||(37532822-37532896)
chr7 (19-108)||(37532897-37532987)
chr7 (178-260)||(40094502-40094583)
chr7 (210-262)||(7517580-7517632)
chr7 (123-262)||(45434548-45434688)
chr7 (210-261)||(36622960-36623011)
chr7 (212-260)||(47129097-47129145)
chr7 (183-261)||(1085355-1085436)
chr7 (213-259)||(41910703-41910749)
chr7 (217-262)||(11845198-11845243)
chr7 (210-262)||(23483-23535)
chr7 (210-262)||(24177435-24177487)
chr7 (210-262)||(36109023-36109075)
chr7 (210-262)||(36939839-36939891)
chr7 (210-262)||(43241495-43241547)
chr7 (204-247)||(14681281-14681324)
chr7 (212-262)||(6054562-6054612)
chr7 (212-262)||(45433243-45433293)
chr7 (212-262)||(45754718-45754767)
chr7 (210-259)||(16569196-16569245)
chr7 (210-259)||(16596417-16596466)
chr7 (210-262)||(118407-118459)
chr7 (210-262)||(8128547-8128599)
chr7 (213-261)||(9901648-9901695)
chr7 (218-262)||(19122740-19122783)
chr7 (210-262)||(22567145-22567196)
chr7 (202-262)||(37533470-37533530)
chr7 (210-262)||(40094880-40094932)
chr7 (70-118)||(45697753-45697801)
chr7 (210-261)||(40230398-40230449)
chr7 (216-262)||(34218140-34218186)
chr7 (212-262)||(36967335-36967385)
chr7 (161-227)||(37345868-37345933)
chr7 (213-254)||(20599317-20599358)
chr7 (213-262)||(24838808-24838857)
chr7 (210-262)||(28301649-28301701)
chr7 (210-262)||(36534890-36534942)
chr7 (210-262)||(41854635-41854686)
chr7 (215-262)||(30032572-30032619)
chr7 (215-262)||(44361569-44361616)
chr7 (22-102)||(45433424-45433505)
chr7 (19-97)||(40094664-40094743)
chr7 (20-99)||(28300473-28300552)
chr7 (37-98)||(48243356-48243419)
[»] chr2 (57 HSPs)
chr2 (19-262)||(5542731-5542974)
chr2 (19-261)||(14745401-14745642)
chr2 (19-262)||(29676710-29676955)
chr2 (138-262)||(36178375-36178498)
chr2 (178-262)||(37106156-37106240)
chr2 (147-262)||(36785669-36785786)
chr2 (178-262)||(7598577-7598661)
chr2 (178-262)||(38796324-38796410)
chr2 (177-262)||(28531420-28531504)
chr2 (200-262)||(5543104-5543166)
chr2 (201-262)||(36178711-36178772)
chr2 (202-262)||(14745773-14745833)
chr2 (190-259)||(31468855-31468926)
chr2 (202-262)||(41283581-41283641)
chr2 (130-246)||(3673003-3673121)
chr2 (206-262)||(37105920-37105976)
chr2 (178-262)||(40679735-40679818)
chr2 (210-262)||(16542449-16542501)
chr2 (177-262)||(40733848-40733935)
chr2 (182-262)||(15880233-15880315)
chr2 (212-262)||(6421387-6421437)
chr2 (210-262)||(962598-962650)
chr2 (202-262)||(1769884-1769944)
chr2 (177-262)||(40733482-40733569)
chr2 (210-256)||(37632709-37632755)
chr2 (213-262)||(31899532-31899581)
chr2 (210-262)||(35580829-35580881)
chr2 (210-262)||(38796726-38796778)
chr2 (178-262)||(42514981-42515068)
chr2 (212-258)||(6421306-6421352)
chr2 (212-262)||(6712978-6713028)
chr2 (19-87)||(36178513-36178582)
chr2 (210-262)||(42514649-42514701)
chr2 (214-261)||(28254344-28254391)
chr2 (177-262)||(6422084-6422162)
chr2 (228-262)||(36178277-36178311)
chr2 (177-227)||(41678510-41678559)
chr2 (217-262)||(15511601-15511646)
chr2 (19-60)||(37106106-37106147)
chr2 (221-262)||(40163479-40163520)
chr2 (210-262)||(12529134-12529186)
chr2 (210-261)||(16590888-16590940)
chr2 (177-262)||(30323430-30323516)
chr2 (178-254)||(37894806-37894881)
chr2 (177-261)||(29873644-29873729)
chr2 (215-258)||(33731653-33731696)
chr2 (191-262)||(33953877-33953947)
chr2 (212-262)||(5367457-5367507)
chr2 (212-262)||(36005986-36006035)
chr2 (177-232)||(40734243-40734300)
chr2 (180-262)||(30313147-30313230)
chr2 (177-242)||(33561577-33561641)
chr2 (210-246)||(3672719-3672755)
chr2 (20-99)||(7598411-7598491)
chr2 (218-262)||(29676543-29676587)
chr2 (210-242)||(33954387-33954419)
chr2 (20-48)||(35580671-35580699)
[»] scaffold0078 (1 HSPs)
scaffold0078 (19-262)||(5165-5409)
[»] scaffold0702 (2 HSPs)
scaffold0702 (19-262)||(248-490)
scaffold0702 (212-262)||(620-670)
[»] chr5 (54 HSPs)
chr5 (19-262)||(6500633-6500874)
chr5 (118-262)||(3295121-3295266)
chr5 (21-156)||(9498496-9498629)
chr5 (147-262)||(624134-624248)
chr5 (177-262)||(26074888-26074975)
chr5 (202-262)||(32487386-32487446)
chr5 (183-262)||(26074252-26074330)
chr5 (178-262)||(13415866-13415951)
chr5 (202-262)||(623810-623870)
chr5 (202-262)||(5723897-5723957)
chr5 (202-262)||(6500443-6500502)
chr5 (177-262)||(26074577-26074664)
chr5 (202-262)||(27502142-27502202)
chr5 (210-261)||(12662759-12662810)
chr5 (207-262)||(36492323-36492378)
chr5 (203-261)||(41170627-41170685)
chr5 (177-262)||(24489310-24489394)
chr5 (20-105)||(32487576-32487661)
chr5 (202-262)||(18603226-18603286)
chr5 (210-262)||(40296421-40296473)
chr5 (211-262)||(299490-299541)
chr5 (210-261)||(15370099-15370150)
chr5 (212-262)||(42405702-42405752)
chr5 (201-262)||(9498760-9498821)
chr5 (177-262)||(36522002-36522086)
chr5 (202-262)||(7768842-7768902)
chr5 (210-262)||(35150007-35150059)
chr5 (212-262)||(6224198-6224248)
chr5 (217-262)||(11417083-11417128)
chr5 (210-262)||(36568673-36568725)
chr5 (182-245)||(13785732-13785794)
chr5 (207-262)||(29549361-29549416)
chr5 (178-261)||(38427525-38427599)
chr5 (212-262)||(1028623-1028673)
chr5 (212-262)||(26075268-26075318)
chr5 (213-262)||(3295450-3295498)
chr5 (213-262)||(25327938-25327987)
chr5 (202-250)||(5660290-5660338)
chr5 (177-242)||(31509589-31509655)
chr5 (213-261)||(35914852-35914900)
chr5 (210-262)||(41632782-41632834)
chr5 (212-259)||(300961-301008)
chr5 (222-256)||(33747783-33747817)
chr5 (210-252)||(35150747-35150789)
chr5 (210-252)||(35151038-35151080)
chr5 (212-262)||(39309686-39309736)
chr5 (96-149)||(795196-795249)
chr5 (178-222)||(15370380-15370426)
chr5 (202-259)||(22298956-22299014)
chr5 (212-262)||(26074320-26074370)
chr5 (19-94)||(26075058-26075134)
chr5 (213-262)||(6225047-6225096)
chr5 (177-242)||(36522363-36522427)
chr5 (212-261)||(42508614-42508663)
[»] chr4 (72 HSPs)
chr4 (23-239)||(18932887-18933102)
chr4 (23-142)||(41370543-41370662)
chr4 (147-262)||(44620595-44620712)
chr4 (180-262)||(52884856-52884939)
chr4 (173-262)||(49076552-49076643)
chr4 (167-262)||(3341083-3341180)
chr4 (147-262)||(44621361-44621478)
chr4 (202-262)||(50788087-50788147)
chr4 (123-259)||(2740984-2741120)
chr4 (200-262)||(50630859-50630921)
chr4 (178-262)||(20826186-20826269)
chr4 (202-262)||(49880152-49880212)
chr4 (210-262)||(52884695-52884747)
chr4 (202-262)||(55933228-55933288)
chr4 (19-153)||(10246102-10246237)
chr4 (177-262)||(36629205-36629289)
chr4 (202-259)||(41370349-41370406)
chr4 (182-262)||(54108888-54108965)
chr4 (178-262)||(45489435-45489522)
chr4 (178-261)||(3244556-3244638)
chr4 (210-261)||(25483336-25483387)
chr4 (207-262)||(50002423-50002478)
chr4 (179-262)||(22028065-22028150)
chr4 (147-262)||(39404334-39404450)
chr4 (212-262)||(41707568-41707618)
chr4 (210-262)||(2740700-2740752)
chr4 (210-262)||(10245920-10245972)
chr4 (210-261)||(54017700-54017751)
chr4 (19-112)||(3340989-3341083)
chr4 (212-262)||(34646753-34646803)
chr4 (181-247)||(41370673-41370738)
chr4 (19-88)||(45496733-45496803)
chr4 (220-262)||(54343105-54343147)
chr4 (202-259)||(6975563-6975620)
chr4 (210-262)||(3700365-3700417)
chr4 (210-262)||(4955421-4955473)
chr4 (211-259)||(16888923-16888971)
chr4 (147-206)||(16889315-16889375)
chr4 (210-262)||(36608765-36608817)
chr4 (218-262)||(44620304-44620348)
chr4 (210-261)||(1731752-1731803)
chr4 (90-261)||(10246240-10246398)
chr4 (210-261)||(22183369-22183420)
chr4 (19-98)||(2740873-2740953)
chr4 (212-262)||(19504707-19504757)
chr4 (216-262)||(20825842-20825888)
chr4 (212-262)||(36572021-36572071)
chr4 (210-262)||(4390205-4390257)
chr4 (186-262)||(43174480-43174559)
chr4 (210-262)||(49076934-49076986)
chr4 (213-261)||(49302907-49302955)
chr4 (213-261)||(50459724-50459772)
chr4 (210-262)||(54741282-54741334)
chr4 (19-99)||(20826019-20826101)
chr4 (219-262)||(44620362-44620405)
chr4 (212-262)||(39404020-39404070)
chr4 (212-262)||(39792964-39793014)
chr4 (209-262)||(54108537-54108588)
chr4 (225-262)||(45496820-45496857)
chr4 (210-258)||(3340807-3340855)
chr4 (211-259)||(16889643-16889691)
chr4 (210-262)||(32941227-32941279)
chr4 (194-262)||(44620926-44620997)
chr4 (210-258)||(45050601-45050649)
chr4 (202-233)||(18933103-18933134)
chr4 (219-262)||(44621011-44621054)
chr4 (223-262)||(54017806-54017845)
chr4 (19-102)||(44621181-44621266)
chr4 (210-251)||(11706636-11706677)
chr4 (229-262)||(54936215-54936248)
chr4 (210-262)||(11348432-11348484)
chr4 (210-262)||(28034229-28034281)
[»] scaffold0734 (2 HSPs)
scaffold0734 (123-262)||(5689-5829)
scaffold0734 (210-262)||(5396-5448)
[»] scaffold0391 (2 HSPs)
scaffold0391 (177-261)||(3092-3178)
scaffold0391 (19-262)||(1212-1465)
[»] scaffold0171 (1 HSPs)
scaffold0171 (178-262)||(17562-17648)
[»] scaffold0504 (1 HSPs)
scaffold0504 (212-262)||(10217-10267)
[»] scaffold0113 (1 HSPs)
scaffold0113 (177-242)||(39805-39870)
[»] scaffold0027 (1 HSPs)
scaffold0027 (210-262)||(47360-47412)


Alignment Details
Target: chr6 (Bit Score: 171; Significance: 6e-92; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 3409469 - 3409711
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    ||||||||||||||||||||||||||||     |||||||||||| |||| ||||| | ||||| ||||| |||||||||||||||||||||||||||||    
T  3409469 gtggtatcagagccccggttcgacgaagtatatgaccgaggcagccggtcgttgcgtaaaaagcagcaacggcggtacaagtagcaagtggctccttgtg 3409568  T
Q  119 caggaacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgt 218  Q
    |||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3409569 cagggatggcaatacaggcaaagtcaaaagcttcggctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgt 3409668  T
Q  219 gagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||    
T  3409669 gagttatatgtaccacatcagataaaatagtaaaagttgaaca 3409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 2377936 - 2378178
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    |||||||||||||||||||||||||||||| || ||||||| ||  |||| ||||| |||||| ||||||||| ||||||| ||||||||||||||||||    
T  2377936 gtggtatcagagccccggttcgacgaagggtgcaaccgaggtagtcggtcgttgcgaagaaagtcgcaacagcagtacaagcagcaagtggctccttgtg 2378035  T
Q  119 caggaacggcgatacaggcaaagtcaaaagcttccgctctaagggg-agcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtg 217  Q
    |||||||   |||||||| ||| | || ||||||||||  |||||| |||| | | ||   ||||||||||| ||| |||||||||||||||||||||||    
T  2378036 caggaacaatgatacaggtaaact-aagagcttccgcttgaagggggagcatgatgaataaatggactcacatttg-gggggagtgttggtttgcaagtg 2378133  T
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2378134 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 2378178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 29518857 - 29518972
Alignment:
Q  147 agcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaat 246  Q
    ||||||||||  | |||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29518857 agcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaat 29518956  T
Q  247 agtaaaggttgaacac 262  Q
    ||||||||||||||||    
T  29518957 agtaaaggttgaacac 29518972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 22 - 262
Target Start/End: Complemental strand, 10074336 - 10074097
Alignment:
Q  22 gtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtgca 120  Q
    |||||||||||||||||||| ||||||  |||||||||| || ||||| ||||||||||||  |||||  ||||||||| |||||||||||| |||||||    
T  10074336 gtatcagagccccggttcgaagaagggtacgaccgaggccgccggtcagttgcgcagaaagtagcaacgacggtacaagcagcaagtggctcattgtgca 10074237  T
Q  121 ggaacggcgatacaggcaaagtcaaaagcttccgctctaa-ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtg 219  Q
      |||||||||||| || |||| || ||||||||||  || |||||||| | | || |||| ||||| |||||||||||||||||| || |||||| |||    
T  10074236 acaacggcgatacaagc-aagt-aagagcttccgcttgaagggggagcatgatgaattgatagactcgcacttgagggggagtgtt-gtgtgcaagggtg 10074140  T
Q  220 agttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||| |||||||||||||| || |||||| |||||||||    
T  10074139 agttatatatcccacatcggatagaaaagtaaacgttgaacac 10074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 26544041 - 26544101
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26544041 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 26544101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 29518495 - 29518555
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29518495 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 29518555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 32741171 - 32741231
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32741171 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 32741231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 16107998 - 16108115
Alignment:
Q  147 agcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaa 244  Q
    ||||||||||  |||||||||| | | || ||||||||||||||||||||||||||||||  || | |||||||||||||||||| ||||||| ||||||    
T  16107998 agcttccgcttgaaggggagcatgatgaattgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcagataaa 16108097  T
Q  245 atagtaaaggttgaacac 262  Q
    | |||||| |||||||||    
T  16108098 agagtaaatgttgaacac 16108115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 3058218 - 3058278
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3058218 tgttggtttgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacac 3058278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 3409251 - 3409311
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3409251 tgttggtttgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacac 3409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 14748504 - 14748444
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14748504 tgttgatttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 14748444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 35210196 - 35210256
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35210196 tgttggtttgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacac 35210256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 2578634 - 2578549
Alignment:
Q  178 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||  || | |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2578634 gatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacac 2578549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 2579297 - 2579211
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||| | ||  ||||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  2579297 gatggactcacacttgagggggagtgttgttgtgtacaagtgttagttatatgtcccacatcggataaaagagtaaaagttgaacac 2579211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 29518685 - 29518784
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgt 117  Q
    |||||||||||||||||||||||||||||| ||||||||| | || ||| | ||||||||||||| |||||  ||||||||| |||||||||||||||||    
T  29518685 gtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 29518784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 10074553 - 10074469
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||| | ||||||||||||||| || ||||||||||||||||    
T  10074553 tgatggactcacacttaagggggagtgttg-tgtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacac 10074469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 3415449 - 3415510
Alignment:
Q  201 gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  3415449 gtgttggtttgcgagtgtgagttatatgtcccacatcacataaaatagtaaaggttgaacac 3415510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 1127352 - 1127412
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  1127352 tgttggtttgcaactgtgagttatatatcccacatcgggtaaaatagtaaaggttgaacac 1127412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 2580030 - 2579978
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2580030 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 2579978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 2579678 - 2579605
Alignment:
Q  181 ggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggt 255  Q
    ||||||||||||||||| |||||||| || ||| |||||||||||||||||||||||||| |||| |||||||||    
T  2579678 ggactcacacttgagggagagtgttg-ttagcaggtgtgagttatatgtcccacatcggacaaaaaagtaaaggt 2579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 1950340 - 1950291
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1950340 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 1950291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 9062501 - 9062456
Alignment:
Q  216 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 9062456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 593867 - 593815
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  593867 tgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacac 593815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 16454872 - 16454959
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||| ||||| |||||||||||||||| | ||  ||| |||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  16454872 tgatggagtcacagttgagggggagtgttgttgtgtacaaatgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacac 16454959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 1846741 - 1846800
Alignment:
Q  203 gttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| |||||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  1846741 gttgggttgcaagtgtgaattctatgtctcacatcggataaaatagtaaaggttgaacac 1846800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 32460733 - 32460686
Alignment:
Q  215 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  32460733 gtgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacac 32460686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 33605913 - 33606027
Alignment:
Q  147 agcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaat 246  Q
    ||||||||||| |||  | ||||| | || ||||||||||||||||||||||||||| | || ||||| ||| ||||||||||||||||||| ||| ||     
T  33605913 agcttccgctcgaagaagggcacggtgaattgatggactcacacttgagggggagtgat-gtgtgcaaatgtaagttatatgtcccacatcgaatagaaa 33606011  T
Q  247 agtaaaggttgaacac 262  Q
    |||  |||||||||||    
T  33606012 agtggaggttgaacac 33606027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 2377756 - 2377806
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  2377756 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacac 2377806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 2579468 - 2579387
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc--attgcgcagaaagccgcaacagcggtacaa 98  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||| ||||   ||||||||||||| ||||| |||||||||    
T  2579468 gtggtatcagagccccggttcgacgaacggtacgaccgaggcagccggtccacttgcgcagaaagcagcaacggcggtacaa 2579387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 10073804 - 10073722
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||| || ||| |||||| | ||||||||| ||||||||||||||||||||| |||  ||||||||||||||||    
T  10073804 tgatggactcacacttaagagggggtgttg-tgtgcaagtgttagttatatgtcccacatcggagaaa--agtaaaggttgaacac 10073722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 26544232 - 26544321
Alignment:
Q  20 tggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtgg 109  Q
    |||||| ||||||||||||||| |||||| |||||||||||||| |||  ||||| |||||||||||||   |||||||  |||||||||    
T  26544232 tggtattagagccccggttcgatgaagggtgcgaccgaggcagccggtatttgcgtagaaagccgcaacgctggtacaaacagcaagtgg 26544321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 35210456 - 35210527
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||    
T  35210456 tgatggactcacacttgagggggagtgttggtttgcaagtgc-----------cccacatcggataaaatagtaaaggttgaa 35210527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 2578811 - 2578730
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc--attgcgcagaaagccgcaacagcggtacaa 98  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||||   ||| ||||||||| ||||| ||| |||||    
T  2578811 gtggtatcagagccccggttcgacgaagggtacgaccgaggcagccggtccgcttgggcagaaagcagcaacggcgttacaa 2578730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 2579016 - 2578944
Alignment:
Q  185 tcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||||||||||||| |  |||||||||| ||||||||||| |||||||||||| |||||| ||||||    
T  2579016 tcacacttgagggggagtgttg-tgagcaagtgtgatttatatgtccctcatcggataaaa-agtaaatgttgaa 2578944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 5832182 - 5832132
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  5832182 caagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacac 5832132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 16107862 - 16107943
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc--attgcgcagaaagccgcaacagcggtacaa 98  Q
    ||||||||||||||||||||||||||||||   |||||||||||| ||||   ||| ||||||||| ||||| |||||||||    
T  16107862 gtggtatcagagccccggttcgacgaagggtatgaccgaggcagccggtccatttgtgcagaaagcagcaacggcggtacaa 16107943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 6999951 - 6999902
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  6999951 aagtgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacac 6999902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 8481893 - 8481978
Alignment:
Q  177 tgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||  |||| || |||||||||||||||||||| ||||||| |||| || |||  |||||||||||    
T  8481893 tgatggactcacacttgagggggagattgtt-gtgtgcaagtgtgagttatatgt-ccacatcagatataaaagtggaggttgaacac 8481978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 16107680 - 16107730
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| |||||    
T  16107680 caagtgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacac 16107730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 5958766 - 5958709
Alignment:
Q  205 tggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||| ||||| ||||||||||||||   ||||||||||||| ||||||||||||||||    
T  5958766 tggtgtgcaattgtgagttatatgtgttacatcggataaaacagtaaaggttgaacac 5958709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 10911565 - 10911618
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggat-aaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||    
T  10911565 tgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacac 10911618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 2579849 - 2579805
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagc 63  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||    
T  2579849 gtggtatcagagccccggttccacgaagggtacgaccgaggcagc 2579805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 6071098 - 6071184
Alignment:
Q  177 tgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||| |||||||| ||  ||||| | ||||||||||||||||||||||||||| | ||| || |||  |||||||||||    
T  6071098 tgatggactcacatttgaggggaagattgttg-tgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacac 6071184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 2843560 - 2843606
Alignment:
Q  216 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||  |||||||||||||||| |||| |||||||||    
T  2843560 tgtgagttatatgtttcacatcggataaaataataaaagttgaacac 2843606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 16454577 - 16454627
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| ||||||||||| ||||||| | |||| |||||||||    
T  16454577 caagtgtgagttatgtgtcccacatcagataaaagaataaaagttgaacac 16454627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 2579082 - 2579042
Alignment:
Q  23 tatcagagccccggttcgacgaagggagcgaccgaggcagc 63  Q
    |||||||| |||||||||||||||||  |||||||||||||    
T  2579082 tatcagagtcccggttcgacgaagggtacgaccgaggcagc 2579042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 16454757 - 16454797
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgagg 59  Q
    ||||||||||||||| ||||||||||||||  |||||||||    
T  16454757 gtggtatcagagcccaggttcgacgaagggtacgaccgagg 16454797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 4e-81; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 1014220 - 1013977
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    ||||||||||||||||||||||||||||||  |||| |||||||| |||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  1014220 gtggtatcagagccccggttcgacgaagggtacgactgaggcagccggtcgttgcgcagaaagccgcaacggcggtacaagcagcaagtggctccttgtg 1014121  T
Q  119 caggaacggcgatacaggcaaagtcaaaagcttccgctctaa-ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtg 217  Q
    |||||||| ||||||| ||||||| || ||||||||||  || |||||| | | | || |||||||||||||||||||||||||||||||||||||||||    
T  1014120 caggaacgacgatacatgcaaagt-aagagcttccgcttgaagggggagtatgatgaattgatggactcacacttgagggggagtgttggtttgcaagtg 1014022  T
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||| |||||||||||||||||||||| |||||||||    
T  1014021 tgagttatatgttccacatcggataaaatagtaaaagttgaacac 1013977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 3669868 - 3670112
Alignment:
Q  18 ggtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgt 117  Q
    |||||||||||||||||  ||| | ||||||  ||| ||||||||| |||| |||||||||||||||||||| ||||||||| | |||||||||||||||    
T  3669868 ggtggtatcagagccccccttcaatgaagggtacgatcgaggcagccggtcgttgcgcagaaagccgcaacaacggtacaagcaacaagtggctccttgt 3669967  T
Q  118 gcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggg-gagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagt 216  Q
    ||||||||||||||||| ||||||| || |||||| |||  ||||| ||||| | | || |||||||||||||||||||||||| |||||||||||||||    
T  3669968 gcaggaacggcgatacatgcaaagt-aagagcttctgcttgaagggtgagcatgatgaattgatggactcacacttgagggggactgttggtttgcaagt 3670066  T
Q  217 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  3670067 gtgagttatatgtcccacatcggataaaatagtaaaggtttaacac 3670112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 9309163 - 9309407
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgt 117  Q
    ||||||||||| |||| |||||||| ||||  |||||||||| || ||||| ||||| |||||||  ||||  ||| ||||| |||||||||||||||||    
T  9309163 gtggtatcagaaccccagttcgacggagggtacgaccgaggccgccggtcagttgcgtagaaagcaacaacgacggcacaagcagcaagtggctccttgt 9309262  T
Q  118 gcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaag 215  Q
    |||| ||| | ||||||    |||| |||| |||| | |    |||||||||| |||||||||||||||||| ||||||||||||||||  || ||||||    
T  9309263 gcagcaacagtgatacaaagcaagtaaaaaacttctgttgg--ggggagcacgataaagtgatggactcacaattgagggggagtgttgttgtgtgcaag 9309360  T
Q  216 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||    
T  9309361 tgtgagttatatgtcccacatcggataaaagagtaaatgttgaacac 9309407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 18372463 - 18372362
Alignment:
Q  161 ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 260  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||    
T  18372463 ggggagcacgataaagtgatggactcacacttgagggggagtgttgttgtgaaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaac 18372364  T
Q  261 ac 262  Q
    ||    
T  18372363 ac 18372362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 6731872 - 6731953
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6731872 gatggactcacatttgagggggagtgttgttttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 165 - 254
Target Start/End: Complemental strand, 18372574 - 18372485
Alignment:
Q  165 agcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaagg 254  Q
    |||||| ||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  18372574 agcacgataaagtgatggactcacacttgagggggagtgttgttgtgaaagtgtgagttatatgtcccacatcggataaaatagtaaagg 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 18372905 - 18372805
Alignment:
Q  161 ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 260  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||    
T  18372905 ggggagcacgataaagtgatggactcacacttgaggag-agtgttgttgtgaaagtgtgagttatatgtcacacatcggataaaatagtaaaggttgaac 18372807  T
Q  261 ac 262  Q
    ||    
T  18372806 ac 18372805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 45121881 - 45121766
Alignment:
Q  144 aaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggat 241  Q
    |||||||||||||||  |||||||||| ||||||||||||||||||||| |||||||||||||  || | |||||||||||| | |||||||||||||||    
T  45121881 aaaagcttccgctctggggggagcacgataaagtgatggactcacacttaagggggagtgttgttgtgtacaagtgtgagttgt-tgtcccacatcggat 45121783  T
Q  242 aaaatagtaaaggttga 258  Q
    |||| ||||||||||||    
T  45121782 aaaagagtaaaggttga 45121766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 45122972 - 45123058
Alignment:
Q  178 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||| ||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45122972 gatggacttacacttgagggggagtgttgctgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacac 45123058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 18373139 - 18373037
Alignment:
Q  161 ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgca-agtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||| | || | ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  18373139 ggggagcacgataaagtgatggactcacacttgagatggagtgttgttgtgtacagtgtgatttatatgtcccacttcggataaaatagtaaaggttgaa 18373040  T
Q  260 cac 262  Q
    |||    
T  18373039 cac 18373037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 18371863 - 18371763
Alignment:
Q  161 ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 260  Q
    |||| ||||| |||||||||||||||||||||||||||||||| || | || |   |||||||||||||| |||||||||||||||||||||||||||||    
T  18371863 ggggggcacgataaagtgatggactcacacttgagggggagtgctgttgtgtagaagtgagttatatgtcacacatcggataaaatagtaaaggttgaac 18371764  T
Q  261 a 261  Q
    |    
T  18371763 a 18371763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 147794 - 147880
Alignment:
Q  177 tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  147794 tgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaaaagtaaatgttgaaca 147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 30441071 - 30441133
Alignment:
Q  200 agtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30441071 agtgttggtttgcaagtgtgagttatatgtcccacatcggctaaaatagtaaaggttgaacac 30441133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 3669678 - 3669739
Alignment:
Q  201 gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3669678 gtgttggtttgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacac 3669739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 40518550 - 40518634
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||| |||  || |||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  40518550 tgatggactcacacttgagggggagtattgtgtt-caagtgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacac 40518634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 30359558 - 30359661
Alignment:
Q  161 ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 258  Q
    |||||||| | |||| |||||||||||||||||||||||| ||||| | ||  ||||||||||||||||||| |||||| ||||||| |||||| |||||    
T  30359558 ggggagcatgataaattgatggactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaagttga 30359657  T
Q  259 acac 262  Q
    ||||    
T  30359658 acac 30359661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 6651476 - 6651552
Alignment:
Q  181 ggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    ||||||||||||||||||  |||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  6651476 ggactcacacttgaggggaggtgttgttttgcaagtg--agttatatgtctcacatcggataaaatagtaaaggttgaa 6651552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 8918956 - 8918870
Alignment:
Q  178 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||| |||||||||||| ||||  | ||||||||||||||||    
T  8918956 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacac 8918870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 3038446 - 3038396
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3038446 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 3038396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 34835185 - 34835261
Alignment:
Q  188 cacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| | ||  |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  34835185 cacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacatccgataaaatagtaaaggttgaacac 34835261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 41416335 - 41416277
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  41416335 tgttggtttgcaagtg--agttatatgtcccacatcggataaaatagtaaaggttgaacac 41416277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 1014411 - 1014351
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  1014411 tgttggtttgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacac 1014351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 45122068 - 45122016
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45122068 tgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacac 45122016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 45122215 - 45122163
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45122215 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacac 45122163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 147454 - 147503
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  147454 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 147503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 34835439 - 34835527
Alignment:
Q  177 tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat-cggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||  || | |||| |||||||||||||||||| | | |||||||||||||||||| |||||    
T  34835439 tgatggactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacac 34835527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 34835705 - 34835793
Alignment:
Q  177 tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat-cggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||  || | |||| |||||||||||||||||| | | |||||||||||||||||| |||||    
T  34835705 tgatggactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacac 34835793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 41972158 - 41972210
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  41972158 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacac 41972210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 20870741 - 20870680
Alignment:
Q  202 tgttggtttgcaagtgtgagttatat--gtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||    
T  20870741 tgttggtttgcaagtgtgagttatatatgttccacatcagataaaatagtaaaggttgaaca 20870680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 25561972 - 25561922
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  25561972 caagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacac 25561922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 34834878 - 34834928
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  34834878 caagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacac 34834928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 37544646 - 37544596
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  37544646 caagtgtgagttataagtcgcacatcggataaaatagtaaaggttgaacac 37544596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 6877021 - 6876968
Alignment:
Q  210 tgcaagtgtgagttatat-gtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  6877021 tgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacac 6876968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 9608745 - 9608797
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  9608745 tgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacac 9608797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 18380171 - 18380123
Alignment:
Q  214 agtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  18380171 agtgtgagttatatatcccacatcgaataaaatagtaaaggttgaacac 18380123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 33113523 - 33113475
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 260  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  33113523 caagtttgagttatatgtcctacatcggataaaatagtaaaggttgaac 33113475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 5420651 - 5420702
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  5420651 tgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaaca 5420702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 1514071 - 1514021
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  1514071 caagtatgagttatatatcccacatcggataaaagagtaaaggttgaacac 1514021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 262
Target Start/End: Complemental strand, 9482784 - 9482710
Alignment:
Q  188 cacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| | || |   ||||||||||||| |||||| |||||||| ||||||||||||||||    
T  9482784 cacttgagggggagtgttgttgtgtacaagtgagttatatgttccacatgggataaaagagtaaaggttgaacac 9482710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 25561792 - 25561750
Alignment:
Q  220 agttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacac 25561750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 30359273 - 30359323
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  30359273 caagtgtgagttatatgtctcacatcggataaaagagtaaatgttgaacac 30359323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 43274776 - 43274699
Alignment:
Q  161 ggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 236  Q
    |||||||||| ||||||||||||||||||||||||||  |||||||  || | |||||||||||||||| || |||||    
T  43274776 ggggagcacgataaagtgatggactcacacttgagggacagtgttgttgtgtacaagtgtgagttatatatctcacat 43274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 70425 - 70381
Alignment:
Q  217 gtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgttgaaca 70381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 32640682 - 32640634
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  32640682 aagtgtgagttatctgtctcacatcggataaaagagtaaaggttgaaca 32640634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 45122604 - 45122676
Alignment:
Q  183 actcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| | ||||||||      ||||| ||| |||||||||||||||||||||||||||||    
T  45122604 actcacacttgagggggagtgttg-tgtgcaagtg------atatggcccgcatcggataaaatagtaaaggttgaacac 45122676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 147637 - 147715
Alignment:
Q  23 tatcagagccccggttcgacgaagggagcgaccgaggcagctggtca--ttgcgcagaaagccgcaacagcggtacaag 99  Q
    |||||||||||||||||||| |||||  ||| |||||||||  |||   ||||||||||||| ||||||||||||||||    
T  147637 tatcagagccccggttcgacaaagggtacgatcgaggcagccagtccgtttgcgcagaaagcagcaacagcggtacaag 147715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 18372758 - 18372708
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| |||||||| |||  |||||||||||||||||||||||||||    
T  18372758 caagtgtgatttatatgttccatttcggataaaatagtaaaggttgaacac 18372708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 40579670 - 40579612
Alignment:
Q  204 ttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||| ||||||||| ||||||||  || || |||||||||||||||||||||||||    
T  40579670 ttggtttccaagtgtgaattatatgtttcatattggataaaatagtaaaggttgaacac 40579612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 8794113 - 8794162
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||| |||||||||||||| | |||| ||||||||    
T  8794113 caagtgtgagttatatgtctcacatcggataaaagaataaatgttgaaca 8794162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 4154472 - 4154386
Alignment:
Q  177 tgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||   ||||| | ||||| |||||||||||||||| ||||| |||| || |||  |||||||||||    
T  4154472 tgatggactcacacttgagggggaaattgttg-tgtgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacac 4154386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 4154824 - 4154772
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||| |||| || |||  |||||||||||    
T  4154824 tgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacac 4154772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 20995559 - 20995507
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| |||||| ||||||| |||  |||||||||||    
T  20995559 tgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaacac 20995507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 20130454 - 20130501
Alignment:
Q  215 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||| |||||||| |||||||||||||| |||||| |||||||||    
T  20130454 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacac 20130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 9308977 - 9309030
Alignment:
Q  210 tgcaagtgtgagttatatgtcc--cacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||  |||||| ||||||| |||||| ||||||||    
T  9308977 tgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaaca 9309030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 18372142 - 18372100
Alignment:
Q  220 agttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||| |||||||  |||||||||||||||||||||||    
T  18372142 agttatatgtaccacatccaataaaatagtaaaggttgaacac 18372100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 43274934 - 43274888
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||||||||  |||||| ||||||| |||||||||||||    
T  43274934 aagtgtgagttatatgtttcacatcagataaaagagtaaaggttgaa 43274888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 12283873 - 12283922
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    ||||||||| ||||||||||||||| || ||||||| |||||| ||||||    
T  12283873 tgcaagtgtaagttatatgtcccacgtcagataaaaaagtaaatgttgaa 12283922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 34835057 - 34835105
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc 68  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||| ||||    
T  34835057 gtggtatcagagccc-ggttcgacgaagggtacgaccgaggcagccggtc 34835105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 40518071 - 40518123
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggat--aaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||| |||||| ||||  |||| ||||||||||||||||    
T  40518071 caagtgtgagttatatgttccacattggataaaaaaaagtaaaggttgaacac 40518123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 3037865 - 3037814
Alignment:
Q  213 aagtgtgagttatat--gtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||  || ||||||||||| |||||||||| |||||||||    
T  3037865 aagtgtgagttatatatgttccacatcggatgaaatagtaaatgttgaacac 3037814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 18645745 - 18645713
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggata 242  Q
    ||||||||||||||||||||| |||||||||||    
T  18645745 tgcaagtgtgagttatatgtctcacatcggata 18645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 43398225 - 43398177
Alignment:
Q  214 agtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| || || |||||||| || ||||||||||||||||    
T  43398225 agtgtgagttatatatctcatatcggatagaaaagtaaaggttgaacac 43398177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 22304377 - 22304618
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagcc-gcaacagcggtacaagtagcaagtggctccttgt 117  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||||  |||||||| |||||||||| ||||||||||||||    
T  22304377 gtggtatcagagccccggttcgacgaagggtacgaccgaggcagccggtcgttgcgcagaaagcaagcaacagctgtacaagtagtaagtggctccttgt 22304476  T
Q  118 gcaggaacggcgatacaggcaaagtcaaaagcttccgctctaagggg-agcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagt 216  Q
     |||||||| ||||||| ||||||| || ||||||||||  |||||| |||| | | ||  |||||||||||||||||||||||||||||||||||||||    
T  22304477 tcaggaacgacgatacaagcaaagt-aagagcttccgcttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagt 22304575  T
Q  217 gtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  22304576 gtgagctatatgtcccacatcggataaaatagtaaaggttgaa 22304618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 70 - 262
Target Start/End: Original strand, 4823515 - 4823707
Alignment:
Q  70 ttgcgcagaaagcc-gcaacagcggtacaagtagcaagtggctccttgtgcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggggagca 168  Q
    |||||||||||||  ||||| | |||||||| | |||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||    
T  4823515 ttgcgcagaaagcaagcaacggtggtacaagcaacaagtggctccttgtgcaggaatggcgatacatgcaaagtaaaaagcttccgctcta-ggggagca 4823613  T
Q  169 cgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||    
T  4823614 cgttaaagtgatggactcacacttgaaggggagtgttggtttgcaagtgtgagttataagtctcacatcggataaaatagtaaaagttaaacac 4823707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 11661846 - 11662003
Alignment:
Q  107 tggctccttgtgcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg 206  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||||| | |||||||| |||||||||||||||||||||  ||||||||||||    
T  11661846 tggctccttgtgcagcaacggcgatacatgcaaagtaaaaagcttccgctctaggaggagcacgataaagtgatggactcacacttttgggggagtgttg 11661945  T
Q  207 --gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
      || || |||||||||||| ||| ||||||| |||||||| ||||||||||||||||    
T  11661946 ttgtatgtaagtgtgagttaaatgccccacattggataaaagagtaaaggttgaacac 11662003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 22304213 - 22304298
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22304213 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 22304298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 22303930 - 22303759
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgt 117  Q
    |||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||| |||||  ||||||||| ||||||||||| |||||    
T  22303930 gtggtatcagagccccggttcgacgaagggtgcgacagaggccgccggtcagttgcgcagaaagcagcaacgacggtacaagcagcaagtggcttcttgt 22303831  T
Q  118 gcaggaacggcgatacaggc-aaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcaca 189  Q
    |||| ||||||||| ||||| ||||| ||||||||||||| | |||||| |||||| || |||||||||||||    
T  22303830 gcagcaacggcgattcaggcaaaagtaaaaagcttccgct-ttaggggaacacgttgaattgatggactcaca 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 118 - 261
Target Start/End: Original strand, 15773099 - 15773243
Alignment:
Q  118 gcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaag 215  Q
    |||| ||| |||||||| |||| || |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||  || ||||||    
T  15773099 gcagcaacagcgatacaagcaa-gtaaaaagcttccgctcttgggggagcacgataaagtgatggactcacacttgagggggagtgttgttgtgtgcaag 15773197  T
Q  216 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||    
T  15773198 tgtgagttatatgtcccacatcgaataaaagagtaaaagttgaaca 15773243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 41360112 - 41359874
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtag--caagtggctccttg 116  Q
    ||||||||||||| |||||||||||||| |  ||||||  ||||| |||| ||| ||||||||| |||||  ||||||||| ||  ||||||||||||||    
T  41360112 gtggtatcagagcgccggttcgacgaagagtacgaccg--gcagccggtcgttgtgcagaaagcagcaacgacggtacaagcagagcaagtggctccttg 41360015  T
Q  117 tgcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggg-gagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgca 213  Q
    |||| ||||||||||||||||||||| || ||||||| ||  ||||| ||||| | | ||  ||| ||||||||||| |||||||||||||  || ||||    
T  41360014 tgcaagaacggcgatacaggcaaagtaaagagcttccacttgaagggagagcatgatgaatagat-gactcacacttaagggggagtgttgttgtgtgca 41359916  T
Q  214 agtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||    |||||||||||||| ||||||||||||||||    
T  41359915 agtgtgagtta----tcccacatcggatacaatagtaaaggttgaa 41359874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 262
Target Start/End: Complemental strand, 37990884 - 37990745
Alignment:
Q  123 aacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttg--caagtgtga 220  Q
    |||||||||||| ||||||| ||||||||||||| | ||||| ||| | | || ||||||||||||| |||||||||||||||| | ||  |||||||||    
T  37990884 aacggcgatacatgcaaagt-aaaagcttccgct-tgaggggggcatgatgaattgatggactcacagttgagggggagtgttgttgtgtacaagtgtga 37990787  T
Q  221 gttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  37990786 gttatatgttccacatcggataaaatagtaaatgttgaacac 37990745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 54018008 - 54017922
Alignment:
Q  178 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||| |||  || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  54018008 gatggactcacacttgagggggagtattgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacac 54017922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 39389062 - 39389122
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39389062 tgttggtttgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacac 39389122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 50612618 - 50612558
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50612618 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacac 50612558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 29644791 - 29644687
Alignment:
Q  161 ggggagcacgttaaagtgatggactcacacttgaggggga---gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttg 257  Q
    |||||||||| |||||||||| | |||||||||||||||    || || || |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  29644791 ggggagcacgataaagtgatgaagtcacacttgaggggggaatgtttttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttg 29644692  T
Q  258 aacac 262  Q
    |||||    
T  29644691 aacac 29644687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 21832532 - 21832449
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  21832532 gatggactcacacttgaggcggagtgtta-tgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacac 21832449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 51886553 - 51886612
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  51886553 tgttggtttgcaagtgtgagttatatgtctcacatcgaataaaatagtaaaggttgaaca 51886612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 22304141 - 22304061
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggt 255  Q
    ||||||||||||||||||||| || ||||| | ||  |||||||||||||||||||||||||| |||||||||||||||||    
T  22304141 tgatggactcacacttgagggagaatgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggt 22304061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 32462752 - 32462664
Alignment:
Q  177 tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagt-aaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||  || | ||||||||||||||||||||||||||| || ||| ||| |||||||||||||    
T  32462752 tgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgaatgaaagagtaaaaggttgaacac 32462664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 37726496 - 37726553
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  37726496 tgttggtttgcaagtgtgagttatatgtctcacatcggataaaatagtaaatgttgaa 37726553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 33803410 - 33803358
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33803410 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 33803358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 43346650 - 43346702
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43346650 tgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaacac 43346702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 25739583 - 25739532
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25739583 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaaca 25739532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 35946524 - 35946574
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35946524 caagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacac 35946574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 42342283 - 42342206
Alignment:
Q  177 tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaa 252  Q
    ||||||||||||||||||||||||||||||  || ||||||||||| | |||||| ||||||||||||||| ||||||    
T  42342283 tgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgattcatatgttccacatcggataaaagagtaaa 42342206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 43346947 - 43346897
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43346947 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacac 43346897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 9240118 - 9240181
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 242  Q
    ||||||||||||||||||| ||||||||| | |||||||||||||||||||| ||||||||||||    
T  9240118 gatggactcacacttgaggaggagtgttg-tgtgcaagtgtgagttatatgttccacatcggata 9240181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 31190017 - 31190069
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  31190017 tgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacac 31190069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 39935124 - 39935061
Alignment:
Q  201 gtgttggtttgcaagtgtgag--ttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||    
T  39935124 gtgttggtttgcaagtgtgagagttatatgtcctacatcggataaaagagtaaaggttgaacac 39935061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 52634678 - 52634726
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 260  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  52634678 caagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaac 52634726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 3135293 - 3135179
Alignment:
Q  148 gcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttggtt-tgcaagtgtgagttatatgtcccacatcggataaaat 246  Q
    |||||||||  | |||||||||| | || ||||| |||||||||||| || ||||||| ||| || |   ||||||||||||||||||||||||||||||    
T  3135293 gcttccgctagagggggagcacgatgaattgatg-actcacacttgatggtgagtgtttgttgtgtacaagtgagttatatgtcccacatcggataaaat 3135195  T
Q  247 agtaaaggttgaacac 262  Q
    |||||| |||||||||    
T  3135194 agtaaatgttgaacac 3135179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 53577364 - 53577415
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  53577364 tgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaaca 53577415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 37991133 - 37991083
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  37991133 caagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacac 37991083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 8327904 - 8327953
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  8327904 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaa 8327953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 11661537 - 11661586
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  11661537 caagtgtgagttatatgtcccacatcggataaaatagtaacggttaaaca 11661586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 15772854 - 15772906
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  15772854 tgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacac 15772906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 29645060 - 29645008
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  29645060 tgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacac 29645008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 42342546 - 42342494
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  42342546 tgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacac 42342494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 53118131 - 53118080
Alignment:
Q  211 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  53118131 gcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacac 53118080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 53577547 - 53577616
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaa 87  Q
    |||||||||||| |||||||||||||||||  |||||||||| || ||||| ||||||||||||| ||||    
T  53577547 gtggtatcagagtcccggttcgacgaagggtacgaccgaggccgccggtcagttgcgcagaaagcagcaa 53577616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 12114720 - 12114668
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||||||||||    
T  12114720 tgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacac 12114668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 39914252 - 39914304
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| |||||| ||||||| |||| |||||||||||    
T  39914252 tgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacac 39914304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 54018356 - 54018304
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||  |||||||||||| ||||||| ||||||||    
T  54018356 tgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacac 54018304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 3384435 - 3384372
Alignment:
Q  199 gagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||| |||||| ||||||||||||||||||||  ||||||| |||| ||||| |||||    
T  3384435 gagtgttggtgtgcaagcgtgagttatatgtcccacatatgataaaacagtataggttaaacac 3384372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 25755396 - 25755443
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    ||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  25755396 caagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaa 25755443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 3135617 - 3135567
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||| || ||||||| |||||| |||||||||    
T  3135617 caagtgtgagttatatgtcccacctcagataaaagagtaaaagttgaacac 3135567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 33175820 - 33175770
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| |||||| |||| || ||||||||||||||||    
T  33175820 caagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacac 33175770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 7767469 - 7767420
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  7767469 aagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacac 7767420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 45901715 - 45901748
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaa 245  Q
    ||||||||||||||||||||||||||||||||||    
T  45901715 caagtgtgagttatatgtcccacatcggataaaa 45901748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 1634473 - 1634441
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggata 242  Q
    |||||||||||||||||||||||||||||||||    
T  1634473 tgcaagtgtgagttatatgtcccacatcggata 1634441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 12747910 - 12747878
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggata 242  Q
    |||||||||||||||||||||||||||||||||    
T  12747910 tgcaagtgtgagttatatgtcccacatcggata 12747878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 32463057 - 32463017
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaa 252  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  32463057 caagtgtgagttatatgtcccacatcggatagaagagtaaa 32463017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 32589704 - 32589755
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||| |||||||||||||  ||||||||| ||||||||||||||    
T  32589704 tgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacac 32589755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 39336387 - 39336355
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggata 242  Q
    |||||||||||||||||||||||||||||||||    
T  39336387 tgcaagtgtgagttatatgtcccacatcggata 39336355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 42584970 - 42584928
Alignment:
Q  220 agttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||| || ||||||| ||||||||    
T  42584970 agttatatgtcccacatcggatagaagagtaaagattgaacac 42584928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 49336843 - 49336797
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 258  Q
    ||||||||||||| ||||| ||||||||||| || ||||||||||||    
T  49336843 caagtgtgagttacatgtctcacatcggatagaaaagtaaaggttga 49336797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 54018174 - 54018093
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca--ttgcgcagaaagccgcaacagcggtacaa 98  Q
    |||| |||||||| ||||||| |||||||| |||| ||||||||| ||||   ||||||||||||| ||||  |||||||||    
T  54018174 gtggcatcagagctccggttcaacgaagggtgcgatcgaggcagccggtccgtttgcgcagaaagcagcaatggcggtacaa 54018093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 2299937 - 2300000
Alignment:
Q  172 taaagtgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccac 234  Q
    |||| ||||||||||||||||||||||||   ||||| | |||||||||| ||||||||||||||    
T  2299937 taaattgatggactcacacttgagggggatattgttg-tgtgcaagtgtgggttatatgtcccac 2300000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 15773036 - 15773117
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaag 99  Q
    ||||||||||||||| | ||||||||||||  ||| |||||| || ||||| ||  ||||||||| ||||||||| ||||||    
T  15773036 gtggtatcagagccctgattcgacgaagggtacgatcgaggccgccggtcagttatgcagaaagcagcaacagcgatacaag 15773117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 5e-74; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 48588833 - 48588594
Alignment:
Q  23 tatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtgcagg 122  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  48588833 tatcagagccccggttcgacgaagggtgcgactgaggcagccggtcattgtgcagaaagctgcaacgacggtacaagcagcaagtggctccttgtgcagg 48588734  T
Q  123 aacggcgatacaggcaaagtcaaaagcttccgctctaagggg-agcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgag 221  Q
    |||| ||||||| ||||| | || ||||||||||  |||||| |||| | | ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  48588733 aacgacgatacatgcaaaat-aagagcttccgcttgaaggggtagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgag 48588635  T
Q  222 ttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    || ||||||| ||||||||||||||||||||||||||||||    
T  48588634 ttctatgtccgacatcggataaaatagtaaaggttgaacac 48588594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 44290799 - 44290565
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||| | |||||||        ||||||||||||    
T  44290799 gtggtatcagagccccggttcgacgaagggtgcgaccgaggcagccggttgttgcgcagaaagccgcaacggtggtacaa--------tggctccttgtg 44290708  T
Q  119 caggaacggcgatacaggcaaagtcaaaagcttccgctctaagggg-agcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtg 217  Q
    |||||||| ||||||||||||||| || ||||||| ||  |||||| |||| | | ||  ||||||||||||||||||||||||||||||||||||||||    
T  44290707 caggaacgacgatacaggcaaagt-aagagcttccccttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtg 44290609  T
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44290608 tgagttatatgtcccacatcggataaaatagtaaaggttgaaca 44290565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 3537495 - 3537253
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagcc-gcaacagcggtacaagtagcaagtg--gctcctt 115  Q
    |||||||||||||| |||||||||||||||  |||||||||||| | |||     |||||||||  ||||| |||||||||| ||||||||  |||||||    
T  3537495 gtggtatcagagccacggttcgacgaagggtacgaccgaggcagttagtc-----gcagaaagcaagcaacggcggtacaagcagcaagtgtggctcctt 3537401  T
Q  116 gtgcaggaacggcgatacaggcaaagtcaaaagcttccgctctaagggg-agcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaa 214  Q
    ||||||||||| ||||||| |||| || || ||||||||||  |||||| |||| | | || ||||||||||||||||||||||||||||||||||||||    
T  3537400 gtgcaggaacgacgatacatgcaaggtaaagagcttccgcttgaagggggagcaagatgaattgatggactcacacttgagggggagtgttggtttgcaa 3537301  T
Q  215 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3537300 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 3537253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 50052000 - 50051777
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||  ||| |||||||||||||||  | ||||||| ||||||||||||||||||    
T  50052000 gtggtatcagagccccggttcgacaaagggcgcgaccgaggcagccggtggttgggcagaaagccgcaacgacagtacaagcagcaagtggctccttgtg 50051901  T
Q  119 caggaacggcgatacaggcaaagtcaaaagcttccgctctaa-ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtg 217  Q
    ||||||||||||||| |||||||| || |||||| |||  || |||||||| | | || | |||||||||||||||||||||| ||||||||||||||||    
T  50051900 caggaacggcgatactggcaaagt-aagagcttctgcttgaagggggagcatgatgaattaatggactcacacttgagggggaatgttggtttgcaagtg 50051802  T
Q  218 tgagttatatgtcccacatcggata 242  Q
    |||||||||||||||||||||||||    
T  50051801 tgagttatatgtcccacatcggata 50051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 26661874 - 26661628
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgt 117  Q
    ||||||| ||| || || ||||||||||||  |||||||||| ||  |||| ||||||||||||| |||||  ||||||||| | |||||||||||||||    
T  26661874 gtggtattagaacctcgattcgacgaagggtacgaccgaggccgccagtcaattgcgcagaaagcagcaacgacggtacaagcaacaagtggctccttgt 26661775  T
Q  118 gcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggg-gagcacgttaaagtgatggactcacacttgagggggagtgttggtttg--caa 214  Q
    |||| |||| ||||||| ||||||| || ||||||||||  ||||| ||| | | | ||  ||||||||||||||| ||||||||||||| | ||  |||    
T  26661774 gcagcaacgacgatacatgcaaagt-aagagcttccgcttgaagggagagtatgatgaatagatggactcacacttaagggggagtgttgttgtgtacaa 26661676  T
Q  215 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  26661675 gtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacac 26661628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 48588462 - 48588340
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    |||||||||||| |||||||| |||||||| || ||||||||||| |||  |||||||||||||||||||  || |||||  | ||||||||||||||||    
T  48588462 gtggtatcagagtcccggttcaacgaagggtgcaaccgaggcagccggttgttgcgcagaaagccgcaacgacgatacaaacaacaagtggctccttgtg 48588363  T
Q  119 caggaacggcgatacaggcaaag 141  Q
    |||||||||||||||||||||||    
T  48588362 caggaacggcgatacaggcaaag 48588340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 37556071 - 37556163
Alignment:
Q  172 taaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggat-aaaatagtaaaggttgaaca 261  Q
    |||||||||||||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37556071 taaagtgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaaca 37556163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 34364891 - 34364977
Alignment:
Q  178 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  34364891 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacac 34364977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 41157311 - 41157427
Alignment:
Q  147 agcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaa 244  Q
    ||||||||||||  |||||||||| |||| |||||||||||||||| ||||||||| |||  || |||||||||||||||||||||||||||| ||||||    
T  41157311 agcttccgctctg-ggggagcacgataaattgatggactcacacttaagggggagtattgttgtgtgcaagtgtgagttatatgtcccacatcagataaa 41157409  T
Q  245 atagtaaaggttgaacac 262  Q
    | |||||| |||||||||    
T  41157410 agagtaaaagttgaacac 41157427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 44290993 - 44290931
Alignment:
Q  200 agtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44290993 agtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 44290931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 22077683 - 22077601
Alignment:
Q  179 atggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  22077683 atggactcacacttgagggggagtgttg-tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacac 22077601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 45494146 - 45494084
Alignment:
Q  201 gtgttggtttgcaagtgtgagtt-atatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45494146 gtgttggtttgcaagtgtgagtttatatgtcccacatcggataaaatagtaaaggttgaacac 45494084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 3550712 - 3550772
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3550712 tgttggttggcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacac 3550772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 41759475 - 41759535
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  41759475 tgttggtttgcaagtgtgagttatatgtcacacatcggataaaatagtaaaagttgaacac 41759535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 50052189 - 50052130
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50052189 tgttggtttttaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 50052130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 11977251 - 11977332
Alignment:
Q  183 actcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  11977251 actcacacttgagggggagtgttgctgtgtacaagtgtgagttatatgtcccacatcgggtaaaacagtaaatgttgaacac 11977332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 32594880 - 32594822
Alignment:
Q  204 ttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  32594880 ttggtttgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacac 32594822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 3537765 - 3537705
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||    
T  3537765 tgttggtttgtacgtgttagttatatgtcccacatcggataaaatagtaaaggttgaacac 3537705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 22077311 - 22077248
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 242  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22077311 gatggacacacacttgagggggagtgttg-tgtgcaagtgtgagttatatgtcccacatcggata 22077248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 34364507 - 34364559
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34364507 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacac 34364559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 41142372 - 41142424
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41142372 tgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacac 41142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 41184583 - 41184531
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41184583 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacac 41184531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 40082408 - 40082459
Alignment:
Q  211 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40082408 gcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacac 40082459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 17294579 - 17294629
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17294579 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 17294629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 34649440 - 34649490
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34649440 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 34649490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 29798199 - 29798251
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  29798199 tgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacac 29798251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 45084382 - 45084434
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  45084382 tgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacac 45084434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 30630828 - 30630750
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtt 256  Q
    ||||||||||||||||||| |||||||||  | ||||||||||| ||||||||| |||||||||||||| | ||||||||    
T  30630828 tgatggactcacacttgagagggagtgtta-tgtgcaagtgtgatttatatgtctcacatcggataaaaaattaaaggtt 30630750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 47379990 - 47379891
Alignment:
Q  161 ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 260  Q
    |||||||||| | || || |||||| ||| |||||||||||||||| |  ||||||||||||||||| |||||||||||||| || |||  |||||||||    
T  47379990 ggggagcacgatgaattgttggacttacatttgagggggagtgttgat--gcaagtgtgagttatatatcccacatcggatagaaaagtggaggttgaac 47379893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 50469256 - 50469187
Alignment:
Q  192 tgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  50469256 tgagggggagtgttg-tgtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaacac 50469187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 31767319 - 31767267
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  31767319 tgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacac 31767267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 32168853 - 32168798
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||    
T  32168853 tgttggtttgcaagtgtgagttatatgtcc-----cggataaaatagtaaaggttgaacac 32168798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 37850758 - 37850706
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  37850758 tgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacac 37850706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 66278 - 66200
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttat-atgtcccacatcggataaaatagtaaaggtt 256  Q
    ||||||||||||||||||||| |||||| || ||||||||||||| || ||||| ||||||||||| || ||||||||||    
T  66278 gatggactcacacttgaggggaagtgtt-gtgtgcaagtgtgagtaatcatgtctcacatcggatagaaaagtaaaggtt 66200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 24600472 - 24600421
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  24600472 tgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaaca 24600421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 35154197 - 35154150
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttg 257  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  35154197 tgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttg 35154150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 38804516 - 38804461
Alignment:
Q  207 gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  38804516 gtttacaagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacac 38804461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 37555733 - 37555779
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||    
T  37555733 aagtgtgagttataagtcccacatcggataaaatagtgaaggttgaa 37555779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 44043944 - 44043895
Alignment:
Q  201 gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaa 251  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  44043944 gtgttggtttgcaagtgt-agttatatgtcccacatcgaataaaatagtaa 44043895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 66630 - 66578
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||||||||||    
T  66630 tgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacac 66578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 5320123 - 5320071
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||||||    
T  5320123 tgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacac 5320071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 11977129 - 11977224
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctcct 114  Q
    |||| |||||||||| |||| |||||||||  |||||||||| |  ||||| ||||||||||||| |||||  ||||||||| ||||||||||||||    
T  11977129 gtggcatcagagccc-ggtttgacgaagggtacgaccgaggccgtcggtcagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcct 11977224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 14318875 - 14318919
Alignment:
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||| |||| |||||||||||||||||||||||||||    
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggttgaacac 14318919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 24132143 - 24132091
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| ||||||||||||||||| ||||||||| || ||||||||||||||||    
T  24132143 tgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacac 24132091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 39066358 - 39066306
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||| | |||||||||||| || ||||||||||||||||    
T  39066358 tgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacac 39066306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 41156991 - 41157043
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||| |||||||||||| | ||||||||| ||||||||||||||||    
T  41156991 tgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacac 41157043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 4878803 - 4878854
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||| |||||||    
T  4878803 tgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaaca 4878854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 26662054 - 26662004
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||| ||||| ||| ||||||| ||||||||||||||||    
T  26662054 caagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacac 26662004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 34364689 - 34364774
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc--attgcgcagaaagccgcaacagcggtacaagtag 102  Q
    ||||||||||||||||||||||||||||||  ||||| || |||| ||||   ||| ||||||||| ||||| ||| |||||||||    
T  34364689 gtggtatcagagccccggttcgacgaagggtacgacccagacagccggtccgtttgtgcagaaagcagcaacggcgatacaagtag 34364774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 44685456 - 44685502
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtt 256  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||    
T  44685456 tgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggtt 44685502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 5528902 - 5528861
Alignment:
Q  220 agttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  5528902 agttatatgtctcacatcggataaaagagtaaaggttgaaca 5528861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 9955911 - 9955960
Alignment:
Q  214 agtgtgagttatatgtcccacatcggat-aaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  9955911 agtgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacac 9955960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 21378199 - 21378150
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    ||||||||| |||||||||||||| |||||||| || |||||||||||||    
T  21378199 tgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaa 21378150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 3875489 - 3875437
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||| || ||||||||||| |||||||||||||| ||||||||||| ||||    
T  3875489 tgcaagagtcagttatatgtcacacatcggataaaaaagtaaaggttgtacac 3875437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 22793279 - 22793327
Alignment:
Q  211 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||||||||||||||||||| ||| || |||| ||||||||    
T  22793279 gcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaa 22793327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 5575110 - 5575156
Alignment:
Q  216 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| ||||||||||||| ||||||| || ||||||||||||||||    
T  5575110 tgtgaattatatgtcccacgtcggatagaagagtaaaggttgaacac 5575156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 66444 - 66399
Alignment:
Q  23 tatcagagccccggttcgacgaagggagcgaccgaggcagctggtc 68  Q
    |||||||| |||||||||||||||||  ||||||||||||| ||||    
T  66444 tatcagagtcccggttcgacgaagggtacgaccgaggcagccggtc 66399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 195
Target Start/End: Complemental strand, 3537587 - 3537495
Alignment:
Q  104 aagtggctccttgtgcaggaacggcgatacaggcaaagtcaaaagcttccgctctaa-ggggagcacgttaaagtgatggactcacacttgag 195  Q
    ||||||||||||||||| ||||| ||| ||| |||| || || ||||||||||  || |||||||| | | |  |||||||||||||||||||    
T  3537587 aagtggctccttgtgcaagaacgacgacacatgcaaggtaaagagcttccgcttgaagggggagcatgatgatttgatggactcacacttgag 3537495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 4266948 - 4266888
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| ||| ||| |||||||||||||||| ||||  ||||||| |||||| |||||||||    
T  4266948 tgttgttttacaaatgtgagttatatgtcctacattagataaaagagtaaatgttgaacac 4266888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 19283613 - 19283581
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggata 242  Q
    |||||||||||||||||||||||||| ||||||    
T  19283613 tgcaagtgtgagttatatgtcccacaccggata 19283581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 24448245 - 24448296
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgt 229  Q
    |||||| |||||| ||||||||||||||| || ||||||||| ||||||||||    
T  24448245 tgatgggctcacaattgagggggagtgtt-gtgtgcaagtgtaagttatatgt 24448296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 31767137 - 31767094
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagc 63  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||    
T  31767137 gtggtatcagagccccg-ttcgacgaagggtacgaccgaggcagc 31767094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 41184246 - 41184198
Alignment:
Q  147 agcttccgctctaaggggagcacgttaaagtgatggactcacacttgag 195  Q
    ||||||||||  | |||||||||| | ||||||||||||||||||||||    
T  41184246 agcttccgcttgagggggagcacgatgaagtgatggactcacacttgag 41184198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 23 - 262
Target Start/End: Original strand, 14681323 - 14681562
Alignment:
Q  23 tatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtgcagg 122  Q
    |||||||||||||||| || |||||| |||||||||||||| |||  |||||||||||||||||||||||||||||  ||||| ||||||||| ||||||    
T  14681323 tatcagagccccggttggatgaagggtgcgaccgaggcagccggttgttgcgcagaaagccgcaacagcggtacaaacagcaaatggctccttatgcagg 14681422  T
Q  123 aacggcgatacaggcaaagtcaaaagcttccgctctaagggg--agcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtga 220  Q
    || ||||||||| ||||||| || ||||||||||  ||||||  |||| | | ||  ||||||||||||||||||||||||||||||||||||||||| |    
T  14681423 aa-ggcgatacatgcaaagt-aagagcttccgcttgaaggggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtaa 14681520  T
Q  221 gttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  14681521 gttatatgtcccacatcagataaaatagtaaaggttgaacac 14681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 37533340 - 37533116
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgt 117  Q
    |||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||| ||||||| |||||  ||||||||| |||||                
T  37533340 gtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgtagaaagcagcaacgacggtacaagcagcaa------------ 37533253  T
Q  118 gcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtg 217  Q
           ||||||||||| |||||| |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37533252 -------cggcgatacagacaaagtaaaaagcttccgctcta-ggggaacacgttaaagtgatggactcacgcttgagggggagtgttggtttgcaagtg 37533161  T
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  37533160 tgagttatatgtcccacattggataaaatagtaaaggttgaacac 37533116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 22567014 - 22566768
Alignment:
Q  19 gtggtatcagagcccc-ggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttg 116  Q
    |||||||||||||||| ||| ||||||||||  ||||| ||||  | ||| | ||| ||||||| | ||||   ||||||||| ||||||||||||||||    
T  22567014 gtggtatcagagcccccggtccgacgaagggtacgaccaaggccaccggttagttgtgcagaaaacagcaaagacggtacaagaagcaagtggctccttg 22566915  T
Q  117 tgcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaa 214  Q
    ||||| |||| | ||||| |||| || |||||||||||||||  |||||||||| ||||||||| |||| ||| ||||||||||||||||  || |||||    
T  22566914 tgcagcaacgacaatacaagcaa-gtaaaaagcttccgctctggggggagcacgataaagtgatagactaacatttgagggggagtgttgttgtatgcaa 22566816  T
Q  215 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  22566815 gtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacac 22566768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 123 - 262
Target Start/End: Original strand, 7553937 - 7554077
Alignment:
Q  123 aacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtga 220  Q
    |||||||| ||| ||||||| || ||||||||||  | |||||||||| | || ||||||||||||||||||||||||||||||  || |||||||||||    
T  7553937 aacggcgacacatgcaaagt-aagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttgttgtgtgcaagtgtga 7554035  T
Q  221 gttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7554036 gttatatgtcccacatcggataaaatagtaaaggttgaacac 7554077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 30244667 - 30244753
Alignment:
Q  178 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  30244667 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacac 30244753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 30255308 - 30255391
Alignment:
Q  181 ggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  30255308 ggactcacacttgagggggagtgttgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacac 30255391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 30244236 - 30244319
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||| |||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  30244236 gatgaactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaa 30244319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 30245043 - 30245129
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| ||||||||||||||||||| | ||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  30245043 gatggactcgcacttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacac 30245129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 29157559 - 29157617
Alignment:
Q  204 ttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29157559 ttggtttgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacac 29157617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 1085774 - 1085722
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1085774 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 1085722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 30245463 - 30245546
Alignment:
Q  181 ggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||| ||||||||||||||| |||||  || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  30245463 ggacacacacttgagggggactgttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacac 30245546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 37532896 - 37532822
Alignment:
Q  132 acaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttgg 207  Q
    ||||||||||| ||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  37532896 acaggcaaagtaaaaagcttccgctata-ggggaacacgttaaagtgaaggactcacacttgagggggagtgttgg 37532822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 37532987 - 37532897
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtg 108  Q
    |||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||| |||||  | ||||||| ||||||||    
T  37532987 gtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgcagaaagcagcaacgactgtacaagcagcaagtg 37532897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 40094583 - 40094502
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 260  Q
    ||||||||||||||| ||| ||||||||| | |||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  40094583 gatggactcacactttaggaggagtgttg-tgtgcaagtgtgagttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 7517580 - 7517632
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7517580 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 7517632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 262
Target Start/End: Original strand, 45434548 - 45434688
Alignment:
Q  123 aacggcgatacaggcaaagtcaaaagcttccgctctaagggg-agcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgag 221  Q
    |||||||||||| ||||    |||||||||||||  |||||| |||| | | || ||| ||||||||||||| ||||| ||  | || | ||||||| ||    
T  45434548 aacggcgatacaagcaagtaaaaaagcttccgcttgaagggggagcatgatgaattgaaggactcacacttgggggggtgttgttgtgtacaagtgtaag 45434647  T
Q  222 ttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  45434648 ttatatgtcccacatcggataaaaaagtaaaggttgaacac 45434688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 36622960 - 36623011
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36622960 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaaca 36623011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 47129097 - 47129145
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 260  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47129097 caagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaac 47129145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 1085436 - 1085355
Alignment:
Q  183 actcacacttgagggggagtgttg--gtttgcaagtgtgagttat-atgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    |||||||||||| |||||||||||  || |||||||||||||| | |||||||| |||||||||||||||||| ||||||||    
T  1085436 actcacacttgaaggggagtgttgttgtgtgcaagtgtgagtttttatgtcccatatcggataaaatagtaaaagttgaaca 1085355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 41910749 - 41910703
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  41910749 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaa 41910703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 11845198 - 11845243
Alignment:
Q  217 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacac 11845243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 23535 - 23483
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  23535 tgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacac 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 24177435 - 24177487
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  24177435 tgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacac 24177487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 36109075 - 36109023
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  36109075 tgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacac 36109023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 36939891 - 36939839
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  36939891 tgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacac 36939839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 43241495 - 43241547
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||| ||||||||||||||| | ||||||||||||||    
T  43241495 tgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacac 43241547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 14681281 - 14681324
Alignment:
Q  204 ttggtttgcaagtgtgagttatatgtcccacatcggataaaata 247  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  14681281 ttggtttgcaagtgtgagttatatgtcccacattggataaaata 14681324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 6054562 - 6054612
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||| ||||||||||| ||||||||||||||||||||| |||||||||    
T  6054562 caagtgttagttatatgtctcacatcggataaaatagtaaatgttgaacac 6054612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 45433243 - 45433293
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  45433243 caagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacac 45433293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 45754718 - 45754767
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  45754718 caagtgtgagttatatgtcc-acatcggataaaatagtaaatgttgaacac 45754767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 16569196 - 16569245
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||||||    
T  16569196 tgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaa 16569245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 16596466 - 16596417
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||||||    
T  16596466 tgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaa 16596417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 118459 - 118407
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| |||||||||||||||||| |||| || ||||||||||||||||    
T  118459 tgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacac 118407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 8128599 - 8128547
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| |||||||| || | ||||||||||||||    
T  8128599 tgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacac 8128547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 9901648 - 9901695
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  9901648 aagtgtgagttatatgtcc-acatcggataaaacagtaaaggttgaaca 9901695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 19122740 - 19122783
Alignment:
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  19122740 tgagttatatgtcc-acatcggataaaatagtaaaggttgaacac 19122783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 22567196 - 22567145
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  22567196 tgcaagtgtgagtaatatgtcc-acatcggataaaagagtaaaggttgaacac 22567145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 37533530 - 37533470
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| |||| ||||||||||||||||| | |||| | |||||||||||||||||||||||    
T  37533530 tgttgatttgtaagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacac 37533470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 40094932 - 40094880
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||||| |||||    
T  40094932 tgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacac 40094880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 45697753 - 45697801
Alignment:
Q  70 ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||||||    
T  45697753 ttgcgcagaaagcagcaacggcggtacaagaagcaagtggctccttgtg 45697801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 40230449 - 40230398
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||| ||||||||||||||||||| |||||| |||||| ||||||||    
T  40230449 tgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaaca 40230398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 34218186 - 34218140
Alignment:
Q  216 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||    
T  34218186 tgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacac 34218140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 36967385 - 36967335
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| |||||||||||||| ||||||| || |||||    
T  36967385 caagtgtgagttatatgtctcacatcggataaaaaagtaaagattaaacac 36967335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 37345868 - 37345933
Alignment:
Q  161 ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatat 227  Q
    |||||||||| | || ||||| |||||||||||| |||||||||| || ||||||||||||||||||    
T  37345868 ggggagcacgatgaattgatgaactcacacttgaaggggagtgtt-gtgtgcaagtgtgagttatat 37345933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 20599317 - 20599358
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaagg 254  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  20599317 aagtgtgagttatatgtcccatatcggataaaaaagtaaagg 20599358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 24838857 - 24838808
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||| ||||||||||| ||||||| |||||| ||||||||||||||||    
T  24838857 aagtgtaagttatatgtctcacatcgaataaaagagtaaaggttgaacac 24838808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 28301701 - 28301649
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| ||||||||||| || |||||| | |||||||    
T  28301701 tgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacac 28301649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 36534942 - 36534890
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| | ||||||||||||| |||||||||| |||| |||||||||||    
T  36534942 tgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacac 36534890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 41854635 - 41854686
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||| |||||||||||||||||||| | ||||| ||||||||||||||||    
T  41854635 tgcaagtatgagttatatgtcccacatcag-taaaagagtaaaggttgaacac 41854686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 30032572 - 30032619
Alignment:
Q  215 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| |||||| |||||  |||||||||    
T  30032572 gtgtgagttatatgtcccacatcgaataaaagagtaagtgttgaacac 30032619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 44361616 - 44361569
Alignment:
Q  215 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||| |||||||| |||||||||||||| |||||| |||||||||    
T  44361616 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacac 44361569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 45433424 - 45433505
Alignment:
Q  22 gtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc--attgcgcagaaagccgcaacagcggtacaagtag 102  Q
    |||||||||||| |||||||| |||||  ||||||||||||||||||   ||||||| ||||| ||||| ||||| |||||||    
T  45433424 gtatcagagccc-ggttcgacaaagggtacgaccgaggcagctggtccgtttgcgcataaagcagcaacggcggttcaagtag 45433505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 40094743 - 40094664
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc--attgcgcagaaagccgcaacagcggtaca 97  Q
    ||||||||||||||| | ||||||||||||  ||||||||||||| ||||   ||||||||||||  ||||| ||||||||    
T  40094743 gtggtatcagagccctg-ttcgacgaagggtacgaccgaggcagccggtccgtttgcgcagaaagtagcaacggcggtaca 40094664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 28300552 - 28300473
Alignment:
Q  20 tggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc-attgcgcagaaagccgcaacagcggtacaag 99  Q
    |||||||||||||  | ||||||||||||  ||||||||||||  |||| |||||||||||||| |||||  |||||||||    
T  28300552 tggtatcagagcct-gattcgacgaagggtacgaccgaggcagtcggtccattgcgcagaaagcagcaacgacggtacaag 28300473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 48243419 - 48243356
Alignment:
Q  37 ttcgacgaagggagcgaccgaggcagctggtca--ttgcgcagaaagccgcaacagcggtacaa 98  Q
    ||||||||||||  ||||||||||||| ||||   ||||||||||||| ||||| |||||||||    
T  48243419 ttcgacgaagggtacgaccgaggcagccggtccgtttgcgcagaaagcagcaacggcggtacaa 48243356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 5542974 - 5542731
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    |||||||||||||  ||||||||||| |   || ||||||||||  |||| ||| ||||||||||||||| |||||||||| | ||||||||||||||||    
T  5542974 gtggtatcagagcttcggttcgacgacgaatgcaaccgaggcagtcggtcgttgtgcagaaagccgcaacggcggtacaagcaacaagtggctccttgtg 5542875  T
Q  119 caggaacggcgatacaggcaaagtcaaaagcttccgctctaagggga-gcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtg 217  Q
    ||||||| |||||||||||||||| | | |||||||||  ||||||| ||| | | ||  ||||||||||||||||||||||||||||||||||||||||    
T  5542874 caggaacagcgatacaggcaaagttaga-gcttccgcttgaaggggaagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtg 5542776  T
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||| |||| |||||||||||||||||||||||    
T  5542775 tgagttatatgtcccatatcgaataaaatagtaaaggttgaacac 5542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 14745642 - 14745401
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||| | || || ||||||||||||||||  | ||||||| | ||||||||||||||||    
T  14745642 gtggtatcagagccccggttcgatgaagggtgcgaccaaggcagccgatcgttacgcagaaagccgcaacgacagtacaagcaacaagtggctccttgtg 14745543  T
Q  119 caggaacggcgatacaggcaaagtcaaaagcttccgctctaa-ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtg 217  Q
    ||||||||||||||||| |||||| || ||||||||||  || |||||||| | | ||  |||| ||||| |||||| ||||||||||||||||||| ||    
T  14745542 caggaacggcgatacagacaaagt-aagagcttccgcttgaagggggagcatgatgaatagatgtactcaaacttga-ggggagtgttggtttgcaactg 14745445  T
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  14745444 tgagttatatgtcccacatcgaataaaatagtaatggttgaaca 14745401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 29676710 - 29676955
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgt 117  Q
    ||||||||||||||||||||| ||||||||   ||| ||||| || | ||| |||||||||||||  ||||  | ||||||| |||||||||||||||||    
T  29676710 gtggtatcagagccccggttcaacgaagggtatgactgaggccgccgatcagttgcgcagaaagcaacaacgacagtacaagcagcaagtggctccttgt 29676809  T
Q  118 gcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaag 215  Q
    |||| |||||  ||||| |||| || ||||||||||| |||  |||||||||| |||||||||||||||||||||||||||| ||||||  || |||| |    
T  29676810 gcagcaacggaaatacaagcaa-gtaaaaagcttccggtctggggggagcacgataaagtgatggactcacacttgagggggtgtgttgttgtgtgcagg 29676908  T
Q  216 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||    
T  29676909 tgtgagttatatgtcccacatcggataaaagagtaaaggtttaacac 29676955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 138 - 262
Target Start/End: Complemental strand, 36178498 - 36178375
Alignment:
Q  138 aaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 237  Q
    ||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  36178498 aaagtaaaaagcttccgctcta-ggggaacacattaaagtgatggactcacacttgagggggactgttggtttgcaagtgtgagttatatgtcccacttc 36178400  T
Q  238 ggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||| ||||||    
T  36178399 ggataaaatagtaaaggtggaacac 36178375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 37106156 - 37106240
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37106156 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 37106240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 36785786 - 36785669
Alignment:
Q  147 agcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaa 244  Q
    ||||||||||  | |||||||| | | || |||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||||||||||||    
T  36785786 agcttccgcttgagggggagcatgatgaattgatggactcacactttagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaa 36785687  T
Q  245 atagtaaaggttgaacac 262  Q
    ||||||||||||||||||    
T  36785686 atagtaaaggttgaacac 36785669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 7598577 - 7598661
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  7598577 gatggactcacacttgagagggagtgttggtgtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacac 7598661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 38796410 - 38796324
Alignment:
Q  178 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  38796410 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacac 38796324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 28531504 - 28531420
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  28531504 tgatggactcacacttgagggggagtgttg-tgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacac 28531420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 5543166 - 5543104
Alignment:
Q  200 agtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5543166 agtgttggtttgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacac 5543104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 36178772 - 36178711
Alignment:
Q  201 gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36178772 gtgttagtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 36178711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 14745833 - 14745773
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14745833 tgttggtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacac 14745773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 31468926 - 31468855
Alignment:
Q  190 cttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31468926 cttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 31468855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 41283641 - 41283581
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41283641 tgttggtttgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacac 41283581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 3673003 - 3673121
Alignment:
Q  130 atacaggcaaagtcaaaagcttccgctctaag-gggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttata 226  Q
    ||||| ||||||| |||||||||||||  ||| ||||||| | | || |||||||||||||||||||| |||||||||  || |||||||||||||||||    
T  3673003 atacatgcaaagt-aaaagcttccgcttgaagagggagcatgatgaattgatggactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttata 3673101  T
Q  227 tgtcccacatcggataaaat 246  Q
    |||||||||| |||||||||    
T  3673102 tgtcccacattggataaaat 3673121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 37105920 - 37105976
Alignment:
Q  206 ggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37105920 ggtttgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacac 37105976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 40679818 - 40679735
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| |||||||| || ||||| ||||||||||    
T  40679818 gatggactcacacttgagggggagtgttg-tgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacac 40679735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 16542449 - 16542501
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16542449 tgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacac 16542501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 40733848 - 40733935
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||  | ||  ||||||||||||||||||||||||||| |||||| ||||||| || |||||    
T  40733848 tgatggactcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaagatttaacac 40733935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 15880233 - 15880315
Alignment:
Q  182 gactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||| ||||| ||||||| | ||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  15880233 gactcacacttaaggggaagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacac 15880315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 6421387 - 6421437
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6421387 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 6421437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 962598 - 962650
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  962598 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacac 962650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 1769884 - 1769944
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  1769884 tgttggtgtgcaagtgtgagttatatgtcacacatcggataaaagagtaaaagttgaacac 1769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 40733482 - 40733569
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||| ||||||||||||||||| ||||||  | ||  |||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  40733482 tgatagactcacacttgaggggaagtgttattgtgtacaagtgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacac 40733569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 37632755 - 37632709
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtt 256  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  37632755 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtt 37632709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 31899581 - 31899532
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  31899581 aagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacac 31899532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 35580881 - 35580829
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  35580881 tgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacac 35580829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 38796778 - 38796726
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  38796778 tgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacac 38796726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 42514981 - 42515068
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatg----tcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||| |||||||||||||||| | |||| ||||||||||||||    |||||||||||||| || |||||||||| |||||    
T  42514981 gatggactcacatttgagggggagtgttg-tgtgcaggtgtgagttatatgtatgtcccacatcggatagaaaagtaaaggttaaacac 42515068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 6421306 - 6421352
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 258  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  6421306 caagtgtaagttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 6712978 - 6713028
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  6712978 caagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacac 6713028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 36178582 - 36178513
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaa 87  Q
    |||||||||||||||||||||||||||||| |||||| ||||  | ||||| ||||||||||||| ||||    
T  36178582 gtggtatcagagccccggttcgacgaagggtgcgaccaaggccaccggtcagttgcgcagaaagcagcaa 36178513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 42514649 - 42514701
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||| ||||| |||| || ||||||||||||||||    
T  42514649 tgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacac 42514701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 28254391 - 28254344
Alignment:
Q  214 agtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||| ||||||||||||||||||||| || |||||||||||||||    
T  28254391 agtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaaca 28254344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 6422084 - 6422162
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||| ||| | ||||| |||||      ||||||||||| ||||||| ||||||||||||||||    
T  6422084 tgatggactcacacttgagggggagtcttg-tgtgcaaatgtga------tgtcccacatcagataaaaaagtaaaggttgaacac 6422162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 36178311 - 36178277
Alignment:
Q  228 gtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||    
T  36178311 gtcccacatcggataaaatagtaaaggttgaacac 36178277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 41678559 - 41678510
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatat 227  Q
    |||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  41678559 tgatggactcacacttgaaggggagtgtt-gtgtgcaagtgtgagttatat 41678510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 15511646 - 15511601
Alignment:
Q  217 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||    
T  15511646 gtgagttatatgtcacacaacggataaaagagtaaaggttgaacac 15511601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 37106106 - 37106147
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggc 60  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  37106106 gtggtatcagagccccggttcgacgaagggtgcgactgaggc 37106147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 40163520 - 40163479
Alignment:
Q  221 gttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  40163520 gttatatgtcccacatcggatagaaaagtaaaggttgaacac 40163479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 12529186 - 12529134
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||| |||||  |||||| ||||||| ||||||||    
T  12529186 tgcaagtgtgagttatatgtcctacatcaaataaaacagtaaagattgaacac 12529134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 16590888 - 16590940
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggat-aaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||  || |||| |||||||||||||||    
T  16590888 tgcaagtgtgagttatatgtcccacatcaaataaaaaaagtaaaggttgaaca 16590940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 30323430 - 30323516
Alignment:
Q  177 tgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||  ||||| | |||||||||| ||||||||||||| ||| |||| || | |  |||||||||||    
T  30323430 tgatggactcacacttgagggggagattgttg-tgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacac 30323516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 37894881 - 37894806
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaagg 254  Q
    |||||||||| |||| ||||||||| ||| | ||||| ||||||||||||||||||||| | ||| || ||||||||    
T  37894881 gatggactcatacttaagggggagtattg-tgtgcaaatgtgagttatatgtcccacattgaatagaaaagtaaagg 37894806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 29873729 - 29873644
Alignment:
Q  177 tgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    |||||||||||||||||||||||||  |||| || |||||| ||| |||| |||||||||||| |||| || |||  ||||||||||    
T  29873729 tgatggactcacacttgagggggagattgtt-gtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaaca 29873644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 258
Target Start/End: Original strand, 33731653 - 33731696
Alignment:
Q  215 gtgtgagttatatgtcccacatcggataaaatagtaaaggttga 258  Q
    ||||||||||||| || |||||||||||||| ||||||||||||    
T  33731653 gtgtgagttatatatctcacatcggataaaagagtaaaggttga 33731696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 33953947 - 33953877
Alignment:
Q  191 ttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||| | ||||| ||||||||||| |||||||||| |||| || |||  |||||||||||    
T  33953947 ttgagggggagtgttg-tgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacac 33953877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 5367457 - 5367507
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||  ||||||||||| ||||||||||| || |||||||||||||    
T  5367457 caagtgtgatatatatgtcccagatcggataaaagagcaaaggttgaacac 5367507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 36006035 - 36005986
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||| ||| || |||||| |||||||||    
T  36006035 caagtgtgagttatatgtcccacatcgaatagaa-agtaaaagttgaacac 36005986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 40734243 - 40734300
Alignment:
Q  177 tgatggactcacacttgagggggagtgt--tggtttgcaagtgtgagttatatgtccc 232  Q
    ||||||| ||||||||||||||||||||  | || | |||||||||||||||||||||    
T  40734243 tgatggaatcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtccc 40734300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 30313147 - 30313230
Alignment:
Q  180 tggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| ||  ||||| | |||||| ||| |||||||||| ||||||||||| || |||  |||||||||||    
T  30313147 tggactcacacttgaggggaagattgttg-tgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaacac 30313230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 33561641 - 33561577
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 242  Q
    |||||||| | ||||||| ||||| ||||| | |||||||||||||||||||| ||||||| ||||    
T  33561641 tgatggacacgcacttgatggggaatgttg-tgtgcaagtgtgagttatatgttccacatcagata 33561577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 3672719 - 3672755
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaat 246  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  3672719 tgcaagtatgagttatatgtcccacatcgaataaaat 3672755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 7598411 - 7598491
Alignment:
Q  20 tggtatcagagccccggttcgacgaagggagcgaccgaggcagctggt-cattgcgcagaaagccgcaacagcggtacaag 99  Q
    |||||||| ||||| ||||||||||||||  |||| |||| ||| ||| | ||||||||||||| |||||  |||||||||    
T  7598411 tggtatcaaagcccaggttcgacgaagggtacgactgaggtagccggtccgttgcgcagaaagcagcaacgacggtacaag 7598491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 29676543 - 29676587
Alignment:
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||| ||||| |||||||| ||||||| ||||||||    
T  29676543 tgagttatatgtctcacattggataaaagagtaaagattgaacac 29676587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 33954419 - 33954387
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggata 242  Q
    |||||||||||||||||||||||||||| ||||    
T  33954419 tgcaagtgtgagttatatgtcccacatcagata 33954387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 35580699 - 35580671
Alignment:
Q  20 tggtatcagagccccggttcgacgaaggg 48  Q
    |||||||||||||||||||||||||||||    
T  35580699 tggtatcagagccccggttcgacgaaggg 35580671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 5165 - 5409
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    |||| |||| ||||||| ||||||||| ||  ||| |||||||||||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||    
T  5165 gtggcatcacagccccg-ttcgacgaaaggtacgatcgaggcagctggtcgttgcgcagaaagcagcaacggcggtacaagcagcaagtggctccttgtg 5263  T
Q  119 caggaacggcgatacaggcaaagtcaaaagcttccgctctaa-ggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaag 215  Q
    |||||||||||||||||||||||| || ||||||||||  || |||||||||| | || ||||||||||||||||||||| |||| |||  || ||||||    
T  5264 caggaacggcgatacaggcaaagt-aagagcttccgcttgaagggggagcacgatgaactgatggactcacacttgagggagagttttgttgtgtgcaag 5362  T
Q  216 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||    
T  5363 tgtgagttatatgttccacatcggatagaacagtaaaggttgaacac 5409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 490 - 248
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    |||||||||||||||||||||||||||||| || ||||||| ||  |||| ||||| |||||| ||||||||| ||||||| ||||||||||||||||||    
T  490 gtggtatcagagccccggttcgacgaagggtgcaaccgaggtagtcggtcgttgcgaagaaagtcgcaacagcagtacaagcagcaagtggctccttgtg 391  T
Q  119 caggaacggcgatacaggcaaagtcaaaagcttccgctctaagggg-agcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtg 217  Q
    |||||||   |||||||| ||| | || ||||||||||  |||||| |||| | | ||   ||||||||||| ||| |||||||||||||||||||||||    
T  390 caggaacaatgatacaggtaaact-aagagcttccgcttgaagggggagcatgatgaataaatggactcacatttg-gggggagtgttggtttgcaagtg 293  T
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  292 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 670 - 620
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  670 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacac 620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 6500633 - 6500874
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtg 118  Q
    ||||||||||||  |||||||||||||||| || |||||||||||  ||| ||||||||||||||||||| |||||| ||| ||||||||||||||| ||    
T  6500633 gtggtatcagagttccggttcgacgaagggtgcaaccgaggcagccagtcgttgcgcagaaagccgcaacggcggtataagcagcaagtggctccttatg 6500732  T
Q  119 caggaacggcgatacaggcaaagtcaaaagcttccgctctaagggg-agcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtg 217  Q
     ||||||| |||||||| |||||| || ||||||| ||  |||||| |||| | | ||  ||||||||||||||||| ||||||||||||||||||||||    
T  6500733 taggaacgccgatacag-caaagt-aagagcttccccttgaagggggagcatgatgaatagatggactcacacttgatggggagtgttggtttgcaagtg 6500830  T
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  6500831 tgagttatatgt-ccacatcggataaaatagtaaaggttgaacac 6500874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 3295266 - 3295121
Alignment:
Q  118 gcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg----gtttgca 213  Q
    |||| |||||||||||| |||| || || ||||||||||  | ||||||||||  ||||||||||||||||||||||||||||||||||    || ||||    
T  3295266 gcagcaacggcgatacaagcaa-gt-aagagcttccgcttaagggggagcacgaaaaagtgatggactcacacttgagggggagtgttgttgtgtgtgca 3295169  T
Q  214 agtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3295168 agtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacac 3295121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 9498629 - 9498496
Alignment:
Q  21 ggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtgca 120  Q
    ||||||||||||||| |||||| |||||  ||||||||||||| |||| ||||||||||||| ||||| ||| |||||| ||||||||||||||||||||    
T  9498629 ggtatcagagccccg-ttcgacaaagggtacgaccgaggcagccggtcgttgcgcagaaagctgcaacggcgctacaagcagcaagtggctccttgtgca 9498531  T
Q  121 ggaacggcgatacaggcaaagtcaaaagcttccgct 156  Q
    ||||||| |||||| ||||||| || ||||||||||    
T  9498530 ggaacggtgatacatgcaaagt-aagagcttccgct 9498496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 624134 - 624248
Alignment:
Q  147 agcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaat 246  Q
    ||||||||||  |||||||||| | | ||  |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||    
T  624134 agcttccgcttaaaggggagcatgatgaatagatgga-tcacacttgaggggaagtgttggtttgcaagtgtgagttatatgtcccacattgtataaaat 624232  T
Q  247 agtaaaggttgaacac 262  Q
    ||||||||||||||||    
T  624233 agtaaaggttgaacac 624248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 26074975 - 26074888
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26074975 tgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 26074888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 32487386 - 32487446
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32487386 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 32487446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 26074330 - 26074252
Alignment:
Q  183 actcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  26074330 actcacacttgagggggagtgttg-tgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacac 26074252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 13415951 - 13415866
Alignment:
Q  178 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| |||| ||  || ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13415951 gatggactcacacttgagggg-agtgctgttgtgtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacac 13415866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 623810 - 623870
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  623810 tgttggtttgcaagtgtgagttatatgtctcacatcggatataatagtaaaggttgaacac 623870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 5723957 - 5723897
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  5723957 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaataataaaagttgaacac 5723897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 6500443 - 6500502
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6500443 tgttggtttgcaagtgtgagttatatgtcc-acatcggataaaatagtaaaggttgaacac 6500502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 26074577 - 26074664
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||  | ||  |||||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  26074577 tgatggactcacacttgagggggagtgtttttgtgtacaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacac 26074664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 27502202 - 27502142
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  27502202 tgttggtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacac 27502142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 12662810 - 12662759
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12662810 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 12662759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 36492378 - 36492323
Alignment:
Q  207 gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36492378 gtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 36492323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 41170627 - 41170685
Alignment:
Q  203 gttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  41170627 gttggtttgtaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 41170685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 24489394 - 24489310
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||| |||| || || ||||||| |||||    
T  24489394 tgatggactcacacttgagggggagtgttgtgtt-caagtgtgagttatatgtcccacatcagatagaaaagaaaaggttaaacac 24489310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 32487576 - 32487661
Alignment:
Q  20 tggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaa 105  Q
    |||||||||||||||| |||||||||||| ||||| |||||||| | || ||| ||||||||||||||| |||||||||| |||||    
T  32487576 tggtatcagagccccgattcgacgaagggtgcgactgaggcagccgatcgttgtgcagaaagccgcaacggcggtacaagcagcaa 32487661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 18603286 - 18603226
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18603286 tgttagttttcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacac 18603226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 40296473 - 40296421
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40296473 tgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacac 40296421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 299490 - 299541
Alignment:
Q  211 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  299490 gcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacac 299541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 15370099 - 15370150
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15370099 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaaca 15370150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 42405752 - 42405702
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42405752 caagtgtgagttatatgtccaacatcggataaaatagtaaaggttgaacac 42405702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 9498821 - 9498760
Alignment:
Q  201 gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||    
T  9498821 gtgttggtttgcaaatgtgagttatatgtctcacatcagatagaatagtaaaggttgaacac 9498760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 36522086 - 36522002
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||| |||| || |||  |||||||||||    
T  36522086 tgatggactcacacttgagggagagtgttg-tgcgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaacac 36522002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 7768842 - 7768902
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  7768842 tgttggttttcaagtgtgagttatatatcctacatcggataaaataataaaggttgaacac 7768902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 35150007 - 35150059
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  35150007 tgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacac 35150059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 6224198 - 6224248
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  6224198 caagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacac 6224248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 11417128 - 11417083
Alignment:
Q  217 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  11417128 gtgagttatatgttccacatcggataaaatagtaaaggttgaacac 11417083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 36568725 - 36568673
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||    
T  36568725 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacac 36568673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 13785794 - 13785732
Alignment:
Q  182 gactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaa 245  Q
    |||||||| |||||||||||||||| | || ||||||||||||||||||||| |||||||||||    
T  13785794 gactcacatttgagggggagtgttg-tgtggaagtgtgagttatatgtcccaaatcggataaaa 13785732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 29549416 - 29549361
Alignment:
Q  207 gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||    
T  29549416 gtttgcaagtgtgagttatatgttccatatcagataaaatagtaaaggatgaacac 29549361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 38427525 - 38427599
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    |||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||| || |||||||||||||||    
T  38427525 gatggactcacacttgagggggagtgttg---------tgtgagttatatgtcccacattggatagaaaagtaaaggttgaaca 38427599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 1028673 - 1028623
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||||    
T  1028673 caagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacac 1028623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 26075318 - 26075268
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  26075318 caagtgtgatttatatgtctcacatcggataaaagagtaaaggttgaacac 26075268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 3295498 - 3295450
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  3295498 aagtgtgagt-atatgttccacatcggataaaatagtaaaggttgaacac 3295450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 25327938 - 25327987
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  25327938 aagtgtgagttatatgtcctacatcggataaaacagtaaaagttgaacac 25327987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 5660290 - 5660338
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagta 250  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  5660290 tgttggtttgcaaatgtgagttatatgttccacatcgaataaaatagta 5660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 31509589 - 31509655
Alignment:
Q  177 tgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcggata 242  Q
    ||||||||||||||||||||| |||  ||||| | ||||||||||||||||||||| |||||||||||    
T  31509589 tgatggactcacacttgagggagagattgttg-tgtgcaagtgtgagttatatgtctcacatcggata 31509655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 35914852 - 35914900
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  35914852 aagtatgagttatatgtcacacatcggataaaagagtaaaggttgaaca 35914900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 41632782 - 41632834
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| ||||||||||| ||||||||||| || ||||||||||||||||    
T  41632782 tgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacac 41632834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 300961 - 301008
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  300961 caagtgtgggttatatgtcccacatcagataaaacagtaaaggttgaa 301008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 33747783 - 33747817
Alignment:
Q  222 ttatatgtcccacatcggataaaatagtaaaggtt 256  Q
    |||||||||||||||||||||||||||||||||||    
T  33747783 ttatatgtcccacatcggataaaatagtaaaggtt 33747817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 35150747 - 35150789
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaa 252  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  35150747 tgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 35151038 - 35151080
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaa 252  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  35151038 tgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 39309686 - 39309736
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| ||||||||||||||||||||||||||||  ||||| |||||||||    
T  39309686 caagtatgagttatatgtcccacatcggataaaagggtaaatgttgaacac 39309736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 795249 - 795196
Alignment:
Q  96 caagtagcaagtggctccttgtgcaggaacggcgatacaggcaaagtcaaaagc 149  Q
    |||| ||||||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  795249 caagcagcaagtggctccttgtgcagcaacggtgatacagacaaagtaaaaagc 795196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 15370380 - 15370426
Alignment:
Q  178 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagt 222  Q
    |||||||||||||||||||||||||||||  || |||||||||||||    
T  15370380 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagt 15370426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 22299014 - 22298956
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggat-aaaatagtaaaggttgaa 259  Q
    |||||||||||| ||||| |||||||||| |||||| ||| |||||| |||||||||||    
T  22299014 tgttggtttgcatgtgtgggttatatgtctcacatcagataaaaataataaaggttgaa 22298956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 26074320 - 26074370
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||| |||| || | ||||| ||||||||    
T  26074320 caagtgtgagttatatgtcccacatcagatagaaaactaaagattgaacac 26074370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 26075134 - 26075058
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc--attgcgcagaaagccgcaacagcggt 94  Q
    |||||||||||||| || ||||||||||||  ||||||||||||| ||||   ||||||||||||| ||||| |||||    
T  26075134 gtggtatcagagcctcg-ttcgacgaagggtacgaccgaggcagccggtctgtttgcgcagaaagcagcaacggcggt 26075058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 6225047 - 6225096
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||| |||||||||| ||||||||| ||||||| | ||||||||||||||    
T  6225047 aagtctgagttatatatcccacatcagataaaagaataaaggttgaacac 6225096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 36522427 - 36522363
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 242  Q
    ||||||| | ||| |||||||||||||||| | || |||||||||||||||||| ||||| |||||    
T  36522427 tgatggatttacaattgagggggagtgttg-tatgaaagtgtgagttatatgtctcacattggata 36522363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 42508614 - 42508663
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||| |||||| |||||||||||||| || |||||||||| ||||    
T  42508614 caagtgtgaattatatatcccacatcggatagaaaagtaaaggttaaaca 42508663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 18933102 - 18932887
Alignment:
Q  23 tatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtgcagg 122  Q
    |||||||||||||||||||||||| | |||||||||||||| |||  ||| |||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  18933102 tatcagagccccggttcgacgaagtgtgcgaccgaggcagccggtggttgtgcagaaagtcgcaacggcggtacaagcagcaagtggctccttgtgcagg 18933003  T
Q  123 aacggcgatacaggcaaagtcaaaagcttccgctctaa-ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgag 221  Q
    |||||||||||||| ||| | || || |||||||  || |||||||| | | ||  ||| |||||||||||||||||| |||||||||||||||| ||||    
T  18933002 aacggcgatacaggtaaaat-aagagtttccgcttgaagggggagcatgatgaatagatagactcacacttgaggggg-gtgttggtttgcaagtctgag 18932905  T
Q  222 ttatatgtcccacatcgg 239  Q
    ||||||||||||||||||    
T  18932904 ttatatgtcccacatcgg 18932887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 41370543 - 41370662
Alignment:
Q  23 tatcagagccccggttcgacgaagggagcgaccgaggcagctggtcattgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgtgcagg 122  Q
    ||||||||||||  |||||||||||| |||||||||||||| |||| |||| |||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  41370543 tatcagagcccccattcgacgaagggtgcgaccgaggcagccggtcgttgcacagaaagccgcaacggcggtacaagcagcaagtagctccttgtgcagg 41370642  T
Q  123 aacggcgatacaggcaaagt 142  Q
    |||||||||||||| |||||    
T  41370643 aacggcgatacaggtaaagt 41370662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 44620595 - 44620712
Alignment:
Q  147 agcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaa 244  Q
    |||||||||| |  |||||||||| | || |||||||||||||||||||| ||||||| |  || |||||||||||||||||||||||||||||||| ||    
T  44620595 agcttccgcttttgggggagcacgatgaattgatggactcacacttgaggtggagtgtcgttgtgtgcaagtgtgagttatatgtcccacatcggatgaa 44620694  T
Q  245 atagtaaaggttgaacac 262  Q
    |||||| |||||||||||    
T  44620695 atagtagaggttgaacac 44620712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 52884856 - 52884939
Alignment:
Q  180 tggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52884856 tggactcacacttgagggg-agtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 52884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 49076643 - 49076552
Alignment:
Q  173 aaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| |||||||||  || |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  49076643 aaagtgatggactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacac 49076552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 3341083 - 3341180
Alignment:
Q  167 cacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||| |||||||||||||||||||||||||  ||||||||  || ||||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  3341083 cacgataaagtgatggactcacacttgaggcagagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacac 3341180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 44621361 - 44621478
Alignment:
Q  147 agcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaa 244  Q
    |||||||||| |  |||||||||| | || |||||||||||||||||||||||||||| |  || |||||||||||||||||||||| |||| |||||||    
T  44621361 agcttccgcttttgggggagcacgatgaattgatggactcacacttgagggggagtgtcgttgtgtgcaagtgtgagttatatgtccaacatgggataaa 44621460  T
Q  245 atagtaaaggttgaacac 262  Q
    | |||||||||| |||||    
T  44621461 acagtaaaggttaaacac 44621478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 50788147 - 50788087
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50788147 tgttggtttgcaagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaacac 50788087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 259
Target Start/End: Original strand, 2740984 - 2741120
Alignment:
Q  123 aacggcgatacaggcaaagtcaaaagcttccgctctaaggggag--cacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtga 220  Q
    |||||||||||  ||||||| || ||||||||||  ||||||||  || | | || |||||||||||||||||| ||||||||||  | |||||||||||    
T  2740984 aacggcgatacgagcaaagt-aagagcttccgcttgaaggggagagcatgatgaattgatggactcacacttgaaggggagtgtta-tgtgcaagtgtga 2741081  T
Q  221 gttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  2741082 gttatatgtcccacatcagatagaatagtaaaggttgaa 2741120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 50630921 - 50630859
Alignment:
Q  200 agtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  50630921 agtgttggtttgcaagcgtgagttatatgtcctacatcggataaaatagtaaaggttgaacac 50630859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 20826186 - 20826269
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||   | | || ||||||||||||||||||||||||||||||||||||| |||||||||    
T  20826186 gatggactcacacttgagggggagtgttatgtagaaa-tgtgagttatatgtcccacatcggataaaatagtaaaagttgaacac 20826269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 49880152 - 49880212
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  49880152 tgttggtttgcaagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacac 49880212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 52884695 - 52884747
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52884695 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 52884747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 55933288 - 55933228
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  55933288 tgttggtttgcaagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacac 55933228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 10246102 - 10246237
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttgt 117  Q
    ||||||||||| ||||||||||| ||||||  |||| ||||| ||  |||| ||| ||||||||| |||||  ||||||||| | ||||||||| |||||    
T  10246102 gtggtatcagaaccccggttcgatgaagggtacgactgaggccgcctgtcagttgtgcagaaagcagcaacgacggtacaagcaacaagtggcttcttgt 10246201  T
Q  118 gcaggaacggcgatacaggcaaagtcaaaagcttcc 153  Q
    |||| |||||| ||||| ||||||| ||||||||||    
T  10246202 gcagcaacggctatacatgcaaagtaaaaagcttcc 10246237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 36629205 - 36629289
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || |||||| ||| |||||    
T  36629205 tgatgggctcacacttgagggggagtgttgtgtt-caagtgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacac 36629289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 41370349 - 41370406
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  41370349 tgttggtttgcaagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaa 41370406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 54108888 - 54108965
Alignment:
Q  182 gactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||| ||||||||||||| | ||||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  54108888 gactcacacttaagggggagtgttg-tgtgcaagtgtcagttat--gtcccacatcggataaaatagtaaaggttgaacac 54108965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 45489522 - 45489435
Alignment:
Q  178 gatggactcacacttgaggggg-agtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||| ||||||| | ||  ||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  45489522 gatggactcacacttgaggggggagtgttgttgtgtacaagtgtgaattatatgtctcacatcggataaaagagtaaaggttgaacac 45489435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 3244638 - 3244556
Alignment:
Q  178 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||| ||| |||| |||||||| | ||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  3244638 gatggactcacgcttaagggagagtgttg-tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaaca 3244556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 25483336 - 25483387
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25483336 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaaca 25483387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 50002423 - 50002478
Alignment:
Q  207 gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  50002423 gtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacac 50002478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 22028150 - 22028065
Alignment:
Q  179 atggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| ||| || ||||||  || ||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  22028150 atggactcacacttaaggaggggtgttgttgtgtgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacac 22028065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 39404334 - 39404450
Alignment:
Q  147 agcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaa 244  Q
    ||||||||||  | || ||||||| | || ||||||||| |||||||||| ||||||||| | ||  |||||||||||||||||||||||||| ||||||    
T  39404334 agcttccgcttgagggagagcacgatgaattgatggact-acacttgaggaggagtgttgttgtgtacaagtgtgagttatatgtcccacatcagataaa 39404432  T
Q  245 atagtaaaggttgaacac 262  Q
    | ||||||||| ||||||    
T  39404433 agagtaaaggtggaacac 39404450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 41707618 - 41707568
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41707618 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 41707568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 2740700 - 2740752
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  2740700 tgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacac 2740752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 10245920 - 10245972
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  10245920 tgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacac 10245972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 54017751 - 54017700
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  54017751 tgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaaca 54017700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 3340989 - 3341083
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctc 112  Q
    ||||||||||||||||||||||||||| ||  |||||||||  |||||||| ||||||||||||| |||||  ||||||||  | ||||||||||    
T  3340989 gtggtatcagagccccggttcgacgaacggtacgaccgaggtcgctggtcagttgcgcagaaagcagcaacgacggtacaaacaacaagtggctc 3341083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 34646803 - 34646753
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  34646803 caagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacac 34646753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 41370673 - 41370738
Alignment:
Q  181 ggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaata 247  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||| ||||| |||||||||||||    
T  41370673 ggactcacacttgagggg-agtgttggtttgaaagagtgagttatatatcccatatcggataaaata 41370738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 45496733 - 45496803
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca-ttgcgcagaaagccgcaac 88  Q
    |||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||| ||||||| |||||    
T  45496733 gtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgtagaaagcagcaac 45496803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 54343147 - 54343105
Alignment:
Q  220 agttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacac 54343105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 6975620 - 6975563
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||| |||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  6975620 tgttagtttgcaaatgtgagttatatgtctcacatccgataaaatagtaaaggttgaa 6975563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 3700365 - 3700417
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  3700365 tgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacac 3700417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 4955473 - 4955421
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  4955473 tgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacac 4955421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 16888971 - 16888923
Alignment:
Q  211 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||    
T  16888971 gcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaa 16888923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 16889375 - 16889315
Alignment:
Q  147 agcttccgctctaaggggagcacg-ttaaagtgatggactcacacttgagggggagtgttg 206  Q
    ||||||||||  | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  16889375 agcttccgcttgagggggagcacgattaaagtgatggactcacacttgagggggagtgttg 16889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 36608817 - 36608765
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  36608817 tgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacac 36608765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 44620304 - 44620348
Alignment:
Q  218 tgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  44620304 tgagttatatgtcccacatgggataaaatagtaaaggttgaacac 44620348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 1731803 - 1731752
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||||||||||    
T  1731803 tgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaaca 1731752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 261
Target Start/End: Original strand, 10246240 - 10246398
Alignment:
Q  90 gcggtacaagtagcaagtggctccttgtgcaggaacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcaca 189  Q
    |||||||||| | ||||||||| ||||||||| || ||| ||||| ||||||| |||||||||| ||||| |||||||              |||||||     
T  10246240 gcggtacaagcaacaagtggcttcttgtgcagcaatggctatacatgcaaagtaaaaagcttccactcta-ggggagc--------------gactcacg 10246324  T
Q  190 cttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    |||||||||||||| ||  || |||||||||  |||||||||| || ||||||||||| |||||||||||||||    
T  10246325 cttgagggggagtgctgttgtgtgcaagtgtctgttatatgtctcaaatcggataaaagagtaaaggttgaaca 10246398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 22183420 - 22183369
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  22183420 tgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaaca 22183369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 2740873 - 2740953
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca--ttgcgcagaaagccgcaacagcggtacaa 98  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||| | ||   ||||||||||||| |||||||||||||||    
T  2740873 gtggtatcagagccccg-ttcgacgaagggtacgaccgaggcagccgatccgtttgcgcagaaagcagcaacagcggtacaa 2740953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 19504707 - 19504757
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  19504707 caagtatgagttatatgtcccatatcggataaaatagtaaaagttgaacac 19504757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 20825842 - 20825888
Alignment:
Q  216 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  20825842 tgtgagttatatgttccacatcggataaaagagtaaaggttgaacac 20825888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 36572021 - 36572071
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||||||||    
T  36572021 caagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacac 36572071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 4390257 - 4390205
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||| || ||||||||| ||||||| ||||||||||||||||    
T  4390257 tgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacac 4390205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 43174480 - 43174559
Alignment:
Q  186 cacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggat-aaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||||| | ||  ||||||||||||||||| | |||||| ||| |||| ||||||||||||||||    
T  43174480 cacacttgagggggagtgttgttgtgtacaagtgtgagttatatgccacacatcagataaaaagagtaaaggttgaacac 43174559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 49076986 - 49076934
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||| ||| || || ||||||||||||||||||||||    
T  49076986 tgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacac 49076934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 49302907 - 49302955
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||||    
T  49302907 aagtgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaaca 49302955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 50459724 - 50459772
Alignment:
Q  213 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  50459724 aagtgtgagttatatgttccacatcggttaaaagagtaaaggttgaaca 50459772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 54741334 - 54741282
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  54741334 tgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacac 54741282  T

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Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 20826019 - 20826101
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc--attgcgcagaaagccgcaacagcggtacaag 99  Q
    |||| |||||||||||  ||||||||||||  ||||||||||||| ||||   ||||||||||||| ||||| ||||||||||    
T  20826019 gtggcatcagagccccaattcgacgaagggtacgaccgaggcagccggtccatttgcgcagaaagcagcaacggcggtacaag 20826101  T

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Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 44620362 - 44620405
Alignment:
Q  219 gagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  44620362 gagttatatgttccacatcggataaaacagtaaaggttgaacac 44620405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 39404020 - 39404070
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||| |||| | |||||| ||||||||||||||||    
T  39404020 caagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacac 39404070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 39793014 - 39792964
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||| |||| || |||||| |||||||||    
T  39793014 caagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacac 39792964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 54108537 - 54108588
Alignment:
Q  209 ttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||  |||||| || |||||||||||||||||||||||||    
T  54108537 ttgcaagtgtgagttat--gtcccatataggataaaatagtaaaggttgaacac 54108588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 45496820 - 45496857
Alignment:
Q  225 tatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||| |||||||||||||||    
T  45496820 tatgtcccacatcggataaaatcgtaaaggttgaacac 45496857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 3340807 - 3340855
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 258  Q
    ||||||||||||||||||||||| |||| ||| ||| ||||||||||||    
T  3340807 tgcaagtgtgagttatatgtcccgcatcagatgaaagagtaaaggttga 3340855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 16889691 - 16889643
Alignment:
Q  211 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 259  Q
    |||||||||||||||||||| || |||||||| || |||||||||||||    
T  16889691 gcaagtgtgagttatatgtctcaaatcggatagaaaagtaaaggttgaa 16889643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 32941279 - 32941227
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||  |||||||| | || ||||||||||||||||    
T  32941279 tgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacac 32941227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 44620926 - 44620997
Alignment:
Q  194 agggggagtgttggtttg--caagtgtgagttatatgtccca-catcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||| | ||  ||||||||||||| |||||||| ||||||||||||  |||||||||||||||    
T  44620926 agggggagtgttgttgtggacaagtgtgagttagatgtcccaacatcggataaaactgtaaaggttgaacac 44620997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 45050601 - 45050649
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 258  Q
    ||||||||||||||||||||| ||||||  |||||| ||||||||||||    
T  45050601 tgcaagtgtgagttatatgtctcacatcaaataaaagagtaaaggttga 45050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 233
Target Start/End: Complemental strand, 18933134 - 18933103
Alignment:
Q  202 tgttggtttgcaagtgtgagttatatgtccca 233  Q
    ||||||||||||||||||||||||||||||||    
T  18933134 tgttggtttgcaagtgtgagttatatgtccca 18933103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 44621011 - 44621054
Alignment:
Q  219 gagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||    
T  44621011 gagttgtatgacccacatcggataaaacagtaaaggttgaacac 44621054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 54017845 - 54017806
Alignment:
Q  223 tatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  54017845 tatatatcccacatcggataaaacagtaaaggttgaacac 54017806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 44621181 - 44621266
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtc--attgcgcagaaagccgcaacagcggtacaagtag 102  Q
    ||||||||||||||| |||| |||||||||  |||||||| |||| ||||   || |||||||||| ||||| ||| |||||||||    
T  44621181 gtggtatcagagccctggtttgacgaagggtacgaccgagacagccggtccgttttcgcagaaagcagcaacggcgatacaagtag 44621266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 11706677 - 11706636
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaa 251  Q
    |||||| ||||||| ||||||||||||||||||||| |||||    
T  11706677 tgcaagggtgagttgtatgtcccacatcggataaaaaagtaa 11706636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 262
Target Start/End: Original strand, 54936215 - 54936248
Alignment:
Q  229 tcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||| ||||||||||||||||||||||||    
T  54936215 tcccacatcagataaaatagtaaaggttgaacac 54936248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 11348484 - 11348432
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||| |||||||||||||| | ||||| |||||||||||  |||||||||||    
T  11348484 tgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacac 11348432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 28034229 - 28034281
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||| ||||||||||| ||||||||| || |||  |||||||||||    
T  28034229 tgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacac 28034281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 123 - 262
Target Start/End: Original strand, 5689 - 5829
Alignment:
Q  123 aacggcgatacaggcaaagtcaaaagcttccgctctaaggggagcacgttaaagtgatggactcacacttgagggggagtgttg--gtttgcaagtgtga 220  Q
    |||||||| ||| ||||||| || ||||||||||  | |||||||| | | || ||||||||||||||||||||||||||||||  || |||||||||||    
T  5689 aacggcgacacatgcaaagt-aagagcttccgcttgagggggagcaagatgaattgatggactcacacttgagggggagtgttgttgtgtgcaagtgtga 5787  T
Q  221 gttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  5788 gttatatgtcgcacatcggataaaatagtaaaggttgaacac 5829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 5396 - 5448
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5396 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacac 5448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 3178 - 3092
Alignment:
Q  177 tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 261  Q
    ||||||||||||||||||||||||||||||  || |||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  3178 tgatggactcacacttgagggggagtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 3092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 1465 - 1212
Alignment:
Q  19 gtggtatcagagccccggttcgacgaagggagcgaccgaggcagctggtca--ttgcgcagaaagccgcaacagcggtacaagtagcaagtggctccttg 116  Q
    ||||||||||||||||||||||||||||||   |||||||||||| ||||   ||| ||||||||| ||||| |||||||||||||   || | ||| |     
T  1465 gtggtatcagagccccggttcgacgaagggtatgaccgaggcagccggtccgtttgtgcagaaagcagcaacggcggtacaagtagt--gtcggtccgtt 1368  T
Q  117 tgc---------aggaacggcgatacaggcaaagtcaaaagcttccgctctaagggg-agcacgttaaagtgatggactcacacttgagggggagtgttg 206  Q
    |||         || |||| ||||||| |||| || || ||||||||||| |||||| |||| | | ||  ||||||||||||||||||||||| |||||    
T  1367 tgcggagaaaccagcaacgacgatacaagcaa-gt-aagagcttccgctcgaagggggagcatgatcaaaagatggactcacacttgagggggaatgttg 1270  T
Q  207 gtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
     | ||  ||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  1269 ttgtgtacaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacac 1212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 17648 - 17562
Alignment:
Q  178 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  17648 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaacac 17562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 10267 - 10217
Alignment:
Q  212 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  10267 caagtgtgagttatatgtctcacatcggataaaatggtaaaagttgaacac 10217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 39805 - 39870
Alignment:
Q  177 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 242  Q
    ||||| |||||||||||||||||| |  | || | |||||||||||||||||||||||||||||||    
T  39805 tgatgaactcacacttgagggggaattgttgtgttcaagtgtgagttatatgtcccacatcggata 39870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 47360 - 47412
Alignment:
Q  210 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 262  Q
    ||||||||||| ||| ||||| |||||| ||||||||||||||| ||||||||    
T  47360 tgcaagtgtgaattaaatgtctcacatccgataaaatagtaaagtttgaacac 47412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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