View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1950_high_9 (Length: 338)
Name: NF1950_high_9
Description: NF1950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1950_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 13 - 323
Target Start/End: Original strand, 31038702 - 31039012
Alignment:
| Q |
13 |
aatatcatacaatgaaagtaaaagcttcccttgaactcagccagcgggtgagttgcagtctcgtagcagcaatgatctacacgacaaactggtaaatttg |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31038702 |
aatatcatacaatgaaagtaaaagcttcccttgaactcagccagcgggtgagttgcagtctcgtagcagcaatgatctacacgacaaactggtaaatttg |
31038801 |
T |
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| Q |
113 |
gagcaaggcaacagcttgagtgggaaaagtgttccacaaagtctaaagttgaccgacatttgaaactcgtttaaaatttcgacaacaaatgatcatcgtc |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31038802 |
cagcaaggcaacagcttgagtgggaaaagtgttccacaaagtctaaagttgaccgacatttgaaactcgtttaaaatttcgacaacaaatgatcatcgtc |
31038901 |
T |
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| Q |
213 |
acatttaattaagtagaagtttaagatcctccacgtccttatggttgtgaccgttgattctgccgaactagttgtgattgagtcactctctcgattccga |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
31038902 |
acatttaattaagtagaagtttaagatcctccacgtccttatggttgtgaccgttgattctgccgaactagttgtgattgagtcactctctcggttccga |
31039001 |
T |
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| Q |
313 |
ggacaagtaat |
323 |
Q |
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||||||||||| |
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| T |
31039002 |
ggacaagtaat |
31039012 |
T |
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