View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19510_high_1 (Length: 819)
Name: NF19510_high_1
Description: NF19510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19510_high_1 |
 | |
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| [»] scaffold0692 (1 HSPs) |
| | |
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Alignment Details
Target: chr5 (Bit Score: 434; Significance: 0; HSPs: 26)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 19 - 485
Target Start/End: Complemental strand, 10217110 - 10216648
Alignment:
| Q |
19 |
tgtatagcgggaatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaa |
118 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10217110 |
tgtatagcgggaatcttgtgtcagaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaa |
10217011 |
T |
|
| Q |
119 |
tgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttat |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10217010 |
tgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtacaaactacaaaggtcaagaatttaaagctctagttttttat |
10216911 |
T |
|
| Q |
219 |
tacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatc |
318 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216910 |
tacatgaaaaatggaagct----tagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatc |
10216815 |
T |
|
| Q |
319 |
attatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatg |
418 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216814 |
attatcgatgttgcttcggcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatg |
10216715 |
T |
|
| Q |
419 |
acatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctca |
485 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216714 |
acatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctca |
10216648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 30 - 627
Target Start/End: Complemental strand, 11049007 - 11048419
Alignment:
| Q |
30 |
aatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaa |
129 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
11049007 |
aatcttgtgtcggaaggtaatgttgttgctgtgaaagtcttcaacctccaaaacaatggagctagcaagagtttcattgttgaatgtaatgcactcaaaa |
11048908 |
T |
|
| Q |
130 |
acattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaa |
229 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
11048907 |
acattagacaccgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagcactagtttttgattacatgaaaaa |
11048808 |
T |
|
| Q |
230 |
tggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgt |
329 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
11048807 |
tggaagct----tagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtgataggttaaacatcattatcgatgt |
11048712 |
T |
|
| Q |
330 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgct |
429 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||||||| |
|
|
| T |
11048711 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagtaatgttcttcttaacgacgacatggttgct |
11048612 |
T |
|
| Q |
430 |
catgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctaca |
529 |
Q |
| |
|
|||||||||||||||||||| |||| | |||||||| ||| | ||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
11048611 |
catgtgagtgattttggcattgcaaaacttgtctcagccaccgatgg------------caatactagtacaattggaataaaaggaaccattggctacg |
11048524 |
T |
|
| Q |
530 |
ctcctccaggtatg-------ttctaaatgcttgcatcttccattgtttctttgaattctcctatgttttggtgaatacttaatatattaccattgacat |
622 |
Q |
| |
|
||||||||||| || |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
11048523 |
ctcctccaggtctgttctaatttctaaatgcttaaatcttccactgtttctttgaattctcctatgttttggtgaatacttaacatattaccattgacat |
11048424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 30 - 613
Target Start/End: Original strand, 10604611 - 10605190
Alignment:
| Q |
30 |
aatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaa |
129 |
Q |
| |
|
||||||||||| |||| |||||| |||||||| |||||||| |||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
10604611 |
aatcttgtgtcagaagataatgtagttgctgtaaaggtcctgaacctccaaaagaagggagcacacaagaatttcattgttgaatgtaatgcactcaaaa |
10604710 |
T |
|
| Q |
130 |
acattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaa |
229 |
Q |
| |
|
|| |||||||| || | |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
10604711 |
ctataagacaccggaatttagttcaagttttaacatgttgttctagtacagattacaaaggtcaagaatttaaagctctagtttttgattacatgaaaaa |
10604810 |
T |
|
| Q |
230 |
tggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgt |
329 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||||||| | || || ||||||||| | ||||| |
|
|
| T |
10604811 |
tggaagct----tagaacaatggttgcatcctgagattttaaatgcagagcctccaacaacgttggaccttggtaaaagatttaacatcatttttgatgt |
10604906 |
T |
|
| Q |
330 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgct |
429 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||| || || ||||||| ||||||||| |
|
|
| T |
10604907 |
tgcttctgcattgcattatcttcatcaagaatgtgagcaattagtcattcattgtgatctaaagccaagcaatgtcctacttgatgatgatatggttgct |
10605006 |
T |
|
| Q |
430 |
catgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctaca |
529 |
Q |
| |
|
||||||||||||||||||||||||| | | ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |
|
|
| T |
10605007 |
catgtgagtgattttggcatagcaagactggtctcgtccattggtggtacctctcatataaatactagtacaattgggataaaaggaactgttggatatg |
10605106 |
T |
|
| Q |
530 |
ctcctccaggtatgttctaaatgcttgcatcttccattgtttctttgaattctcctatgttttggtgaatacttaatatattac |
613 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||| |||||||||| |||||| || | || ||||| ||||||||||| |||| |
|
|
| T |
10605107 |
ctcctccaggtatgttctaaattcttgaatcttcagttgtttctttcaattctactctattctggtgcatacttaatattttac |
10605190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 30 - 639
Target Start/End: Original strand, 10611569 - 10612174
Alignment:
| Q |
30 |
aatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaa |
129 |
Q |
| |
|
||||||||||| |||| |||||||||||| | |||||| | ||||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||| |
|
|
| T |
10611569 |
aatcttgtgtcagaagacaatgttgttgctataaaggtcttcaacctccaaaacaatggagctcacaagagtttcattgttgaatgtaatgcactaaaat |
10611668 |
T |
|
| Q |
130 |
acattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaa |
229 |
Q |
| |
|
|||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
10611669 |
ttattagacaccgaaatttagttaagattttaacatgttgttctagtacagattacaaaggtcaagaatttaaagccctagtttttgattacatgaaaaa |
10611768 |
T |
|
| Q |
230 |
tggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgt |
329 |
Q |
| |
|
|||||||| ||||||||||||||||||| || |||||||| ||||||| || |||||||||||| ||||||| |||||||||||||| ||||| |
|
|
| T |
10611769 |
tggaagct----tagaacaatggttgcatcccaaggttttaaatgaagagcatacagcaacattggacctcagtcatagattaaacatcattatggatgt |
10611864 |
T |
|
| Q |
330 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgct |
429 |
Q |
| |
|
|| |||||||||||||||||| ||| | ||||||||||||||| | ||||||||||| |||||||||||||||| || || ||||||| |||||||| |
|
|
| T |
10611865 |
tggttctgcattacattatcttcataatgaatgtgagcaattggtccttcattgtgatataaagccaagcaatgtcctacttgatgatgatatggttgca |
10611964 |
T |
|
| Q |
430 |
catgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctaca |
529 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||||| || |||||||| |
|
|
| T |
10611965 |
catgtgagtgattttggcatagcaagacttgtctcggccattggtggttcctctcataagaatactaagacaattggaattaaagggactgttggctatg |
10612064 |
T |
|
| Q |
530 |
ctcctccaggtatgttctaaatgcttgcatcttccattgtttctttgaattctcctatgttttggtgaatacttaatatattaccattgacatagtatta |
629 |
Q |
| |
|
|||||||||||||||||||||| | || | ||| || ||||||||||||| ||||||||||| ||| | ||||||| | |||| | || ||| |||||| |
|
|
| T |
10612065 |
ctcctccaggtatgttctaaattcatgaacctttgatcgtttctttgaattttcctatgtttttgtgtaaacttaatgttttactagtggcattgtatta |
10612164 |
T |
|
| Q |
630 |
atagcttttg |
639 |
Q |
| |
|
|||||||||| |
|
|
| T |
10612165 |
atagcttttg |
10612174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 30 - 592
Target Start/End: Complemental strand, 10741049 - 10740487
Alignment:
| Q |
30 |
aatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaa |
129 |
Q |
| |
|
||||||||| | |||| ||||||||||| || |||||| | |||||| ||||||| |||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10741049 |
aatcttgtgacagaagacaatgttgttgccgtaaaggtcttgaacctcaaaaagaagggagctcacaagagtttcattgttgaatgtaatgcactcaaaa |
10740950 |
T |
|
| Q |
130 |
acattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaa |
229 |
Q |
| |
|
| |||||||||||||| | ||||||| |||| |||||||||||||||||||| |||||||||||| ||||||||||| || ||| ||||||||||||| |
|
|
| T |
10740949 |
atattagacaccgaaatttagttaagattttgacatgttgttctagtacagattacaaaggtcaaacttttaaagctcttgtttttgattacatgaaaaa |
10740850 |
T |
|
| Q |
230 |
tggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgt |
329 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||| | |||||| |
|
|
| T |
10740849 |
tggaagct----tagaacaatggttgcatcttgagattttaaatgcagatcatccaagaacattggaccttggtcatagattaaacatcatgaacgatgt |
10740754 |
T |
|
| Q |
330 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgct |
429 |
Q |
| |
|
|| |||||||||||||||| || ||||||||||| |||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
10740753 |
cgccactgcattacattatcttcaccaagaatgtgaacaattggtccttcattgtgatctaaagccaagcaatgtccttcttgatgatgacatggttgct |
10740654 |
T |
|
| Q |
430 |
catgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctaca |
529 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||| |||||| | ||||||||| ||| | |||||||||||||||||||||||||| |||||||| |
|
|
| T |
10740653 |
catgtgagtgattttggcatagcaagacttgtctcagccattgacgatacctctcacaaggaaactagtacaattggaataaaaggaactgttggctatg |
10740554 |
T |
|
| Q |
530 |
ctcctccagg----tatgttctaaatgcttgcatcttccattgtttctttgaattctcctatgtttt |
592 |
Q |
| |
|
|||||||||| |||||||||||| | || || | ||||||||||||| ||| ||| |||||||| |
|
|
| T |
10740553 |
ctcctccaggtatatatgttctaaattcatgaatatcccattgtttctttaaatcctcgtatgtttt |
10740487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 30 - 564
Target Start/End: Original strand, 10564886 - 10565416
Alignment:
| Q |
30 |
aatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaa |
129 |
Q |
| |
|
||||||||||| |||| |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10564886 |
aatcttgtgtcagaagataatgttgttgccgtaaaggtcctgaacctccaaaagaagggagctcacaagagtttcattgttgaatgtaatgcactcaaaa |
10564985 |
T |
|
| Q |
130 |
acattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaa |
229 |
Q |
| |
|
| ||| |||||||||| | ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| || ||| | ||||||||||| |
|
|
| T |
10564986 |
atattcgacaccgaaatttagttaaggttttaacctgttgttcaagtacagattacaaaggtcaagaatttaaagctctggtttttgagtacatgaaaaa |
10565085 |
T |
|
| Q |
230 |
tggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgt |
329 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||| |||| | |||| |||||||||| ||| |||||| ||| |||| ||||||||||| |
|
|
| T |
10565086 |
tggaagct----tagatcaatggttgcatcctgagattttaaatgcagaacccccaacaacattggactttgctcatagattatacattattatcgatgt |
10565181 |
T |
|
| Q |
330 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgct |
429 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||| ||||| | ||||||||||||||||||||||||||| | ||||| | ||||||||||||||| |
|
|
| T |
10565182 |
tgcttctgcattacattatcttcatagagaatgtgaagaattggtcattcattgtgatctaaagccaagcaatatccttcttgacgatgacatggttgct |
10565281 |
T |
|
| Q |
430 |
catgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctaca |
529 |
Q |
| |
|
||||||||||||||||||||||||| | | |||||| | ||||| |||||||| |||| ||||| |||||||||| | | |||||||| || ||||| |
|
|
| T |
10565282 |
catgtgagtgattttggcatagcaagactcgtctcagctattggcagtacctcttataaaaatacaagtacaattgaagttaaaggaacagtaggctatt |
10565381 |
T |
|
| Q |
530 |
ctcctccaggtatgttctaaatgcttgcatcttcc |
564 |
Q |
| |
|
||||||| |||||||| |||||||||| ||||||| |
|
|
| T |
10565382 |
ctcctcctggtatgttttaaatgcttgaatcttcc |
10565416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 30 - 639
Target Start/End: Complemental strand, 10747365 - 10746768
Alignment:
| Q |
30 |
aatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaa |
129 |
Q |
| |
|
||||||||||| ||| ||||| |||||| || || ||||||||||| |||||||| |||||| ||||||||| |||||||||||||||| |||||| | |
|
|
| T |
10747365 |
aatcttgtgtccgaaaataatgctgttgccgtaaaagtcctaaaccttcaaaagaagggagctcacaagagtttcattgttgaatgtaatgtactcaaga |
10747266 |
T |
|
| Q |
130 |
acattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaa |
229 |
Q |
| |
|
|||||||||||||||| | ||||||| ||||||| ||||||||||||| ||| ||||||| ||| || |||||||||||||| ||||||||||| ||||| |
|
|
| T |
10747265 |
acattagacaccgaaatttagttaagattttaacgtgttgttctagtatagattacaaagttcaggagtttaaagctctagttttttattacataaaaaa |
10747166 |
T |
|
| Q |
230 |
tggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgt |
329 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||| || || |||||||||||||||||||| |
|
|
| T |
10747165 |
tggaagct----tagaacaatggttgcatcctgagtttttaaatgaagagcatccaaaaacgttagaccttggccacagattaaacatcattatcgatgt |
10747070 |
T |
|
| Q |
330 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgct |
429 |
Q |
| |
|
|||||| ||||||||||||| || ||||||||||||||||| | ||||| |||||||| |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
10747069 |
tgcttcaacattacattatcttcaccaagaatgtgagcaattagtcattcactgtgatctcaagccaagcaatgtccttcttgatgatgacatggttgct |
10746970 |
T |
|
| Q |
430 |
catgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctaca |
529 |
Q |
| |
|
||||||| ||||||||||||||||| | |||||||| ||| | |||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10746969 |
catgtgactgattttggcatagcaaaacttgtctcagccactagtgg------------caatactagtacaattggaataaaaggaactgttggctatg |
10746882 |
T |
|
| Q |
530 |
ctcctccagg----tatgttctaaatgcttgcatcttccattgtttctttgaattctcctatgttttggtgaatacttaatatattaccattgacatagt |
625 |
Q |
| |
|
|||||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| | | ||||||| ||| | ||||| || |
|
|
| T |
10746881 |
ctcctccaggtatatatgttctaaattcttgagtcttccattgtttctttgaatactcctatgttttggtttagatttaatattatactagggacatcgt |
10746782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 47 - 593
Target Start/End: Original strand, 10580880 - 10581414
Alignment:
| Q |
47 |
taatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaac |
146 |
Q |
| |
|
|||||||||||| || |||||| | |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
10580880 |
taatgttgttgcagtaaaggtcttgaacctccaaaagaaaggagctcacaagagttttattgttgaatgtaatgcactcaaaaatattagacaccaaaat |
10580979 |
T |
|
| Q |
147 |
tcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaa |
246 |
Q |
| |
|
| ||| |||||| |||||||||||||||||||| | |||||||| ||||||||||||||| |||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
10580980 |
ttagtcaaggttctaacatgttgttctagtacaaattacaaaggccaagaatttaaagctttagttttttattacatgaaaaatgga----agcttagaa |
10581075 |
T |
|
| Q |
247 |
caatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacatt |
346 |
Q |
| |
|
||||||||||||||| ||| ||||| | |||| | || || ||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10581076 |
caatggttgcatcctcaga-tttaagtgcagaacctctaacaacattgaaccttggtcatagattaaacatcattatggatgttgcttctgcattacatt |
10581174 |
T |
|
| Q |
347 |
atctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttgg |
446 |
Q |
| |
|
|||| |||| |||||||||||||||| | ||| |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
10581175 |
atcttcatcgagaatgtgagcaattggtccttcgttgtgatctaaagccaagca---cacttcttgatgatgacatgg----tcatgtgagtgattttgg |
10581267 |
T |
|
| Q |
447 |
catagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttc |
546 |
Q |
| |
|
|| ||||| | |||||||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||| |||||||| |
|
|
| T |
10581268 |
cacagcaagacttgtctcagccatttgtggtaccactcataagaatactagtacaactggaataaaaggaacaattggctatgctcctctgggtatgttt |
10581367 |
T |
|
| Q |
547 |
taaatgcttgcatcttccattgtttctttgaattctcctatgttttg |
593 |
Q |
| |
|
||||| ||| ||||||| |||| ||||||| || ||||||||| |
|
|
| T |
10581368 |
taaattattgatacttccatcgtttatttgaatcctaatatgttttg |
10581414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 30 - 542
Target Start/End: Complemental strand, 10717290 - 10716782
Alignment:
| Q |
30 |
aatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaa |
129 |
Q |
| |
|
||||||||||| |||| ||||||||||| || |||||| | |||||| ||||||| |||||| ||||||||| |||||||||||||||||||| |||| |
|
|
| T |
10717290 |
aatcttgtgtcagaagacaatgttgttgccgtaaaggtcttgaacctcaaaaagaagggagctcacaagagtttcattgttgaatgtaatgcactaaaaa |
10717191 |
T |
|
| Q |
130 |
acattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaa |
229 |
Q |
| |
|
| || ||||||||||| ||| ||| | ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||| ||||||||||||| |
|
|
| T |
10717190 |
atatcagacaccgaaatctagtgaagatattaacatgttgttctagtacagattacaaaggtcaaacttttaaagctctagtttttgattacatgaaaaa |
10717091 |
T |
|
| Q |
230 |
tggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgt |
329 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
10717090 |
tggaagct----tagaacaatggttgcatcttgagattttaaatgcagatcatccaagaacattggaccttggtcatagattaaacatcatgatcgatgt |
10716995 |
T |
|
| Q |
330 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgct |
429 |
Q |
| |
|
|| |||||||||||||||| || ||||||||||| ||||| || |||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
10716994 |
cgccactgcattacattatcttcaccaagaatgtgaacaattaatcattcattgtgatcttaagccaagcaatgtccttcttgatgatgacatggttgct |
10716895 |
T |
|
| Q |
430 |
catgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctaca |
529 |
Q |
| |
|
||||||| ||||||||||||||||| | ||||||| ||||| ||||||| ||||| |||| |||||| ||||||||||||| | | ||||||| |
|
|
| T |
10716894 |
catgtgactgattttggcatagcaaaacttgtctcggatattggcattacctctgataaggataccagtacagttggaataaaagggagcattggctatg |
10716795 |
T |
|
| Q |
530 |
ctcctccaggtat |
542 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
10716794 |
ctcccccaggtat |
10716782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 30 - 592
Target Start/End: Complemental strand, 10763483 - 10762921
Alignment:
| Q |
30 |
aatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaa |
129 |
Q |
| |
|
||||||||||| |||| ||| |||||||| | || ||| | ||||||||||| ||||||||| ||||||||| |||||||||||||||||||| |||| |
|
|
| T |
10763483 |
aatcttgtgtcagaagacaatattgttgctataaaagtcttcaacctccaaaacaatggagctcacaagagtttcattgttgaatgtaatgcactaaaaa |
10763384 |
T |
|
| Q |
130 |
acattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaa |
229 |
Q |
| |
|
| ||| |||||| || | ||||||| |||||||||||||||||||||| || || ||||||||||||||||||||||| || ||| ||||||||||||| |
|
|
| T |
10763383 |
atattcaacaccggaatttagttaagattttaacatgttgttctagtactgattataaaggtcaagaatttaaagctctggtttttgattacatgaaaaa |
10763284 |
T |
|
| Q |
230 |
tggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgt |
329 |
Q |
| |
|
|||||||| |||||| |||| |||| ||| || ||||||| ||||| ||||| ||||||||| |||| ||| || | || |||||||| ||||| |
|
|
| T |
10763283 |
tggaagct----tagaacgatggctgcaccctaggaatttaaatgcagagactccaacaacattggatcttgatcaaagactgaatatcattattgatgt |
10763188 |
T |
|
| Q |
330 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgct |
429 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
10763187 |
tgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattgtgatctaaagccaagcaatgtccttcttgatgatgacatggttgct |
10763088 |
T |
|
| Q |
430 |
catgtgagtgattttggcatagcaacatttgtctcaa-ccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctac |
528 |
Q |
| |
|
||||||||||||||||| ||||||| | | || |||| |||||| | ||||||||| |||| | |||||||||| ||||||||||||||| |||||||| |
|
|
| T |
10763087 |
catgtgagtgattttggaatagcaagactagt-tcaagccattgcttgtacctctcttaaggaaactagtacaactggaataaaaggaactgttggctat |
10762989 |
T |
|
| Q |
529 |
actcctccagg----tatgttctaaatgcttgcatcttccattgtttctttgaattctcctatgtttt |
592 |
Q |
| |
|
|||||||||| |||||||| ||| |||| ||| ||||| ||||||||||| ||| |||||||| |
|
|
| T |
10762988 |
gctcctccaggtatatatgttctgaattcttgagtctcccattatttctttgaatcctcgtatgtttt |
10762921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 640 - 819
Target Start/End: Complemental strand, 10216438 - 10216259
Alignment:
| Q |
640 |
tgttatttatctgcgtatcctgaacccatccttcaccattctatcatcaccatctttgtctcctaatgatttttccagtgaaatgttgaagatgttgagt |
739 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216438 |
tgttatttatctgcttatcctgaacccatccttcaccattctatcatcaccatctttgtctcctaatgatttttccagtgaaatgttgaagatgttgagt |
10216339 |
T |
|
| Q |
740 |
ctgaaagatattaaaggaatggtggctaagggaatatgcatcacaaggtccaggagtttcatacagccagatgtatcaaa |
819 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216338 |
ctgaaagatattaaaggaatggtggctaagggaatatgcatcacaaggtccaggagtttcatacagccagatgtatcaaa |
10216259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 53 - 541
Target Start/End: Complemental strand, 10588757 - 10588273
Alignment:
| Q |
53 |
tgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagtt |
152 |
Q |
| |
|
||||||| | ||||| || ||||| ||||||| |||||| ||||||||||||| ||||||||||||||||| || ||||||| ||||| | | |
|
|
| T |
10588757 |
tgttgctatcaaggttctgaaccttaaaaagaagggagctgataagagttttattgccgaatgtaatgcactcaagaatgttagacatcgaaatttggcc |
10588658 |
T |
|
| Q |
153 |
aaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatgg |
252 |
Q |
| |
|
||| ||||||||||||||||| |||| || || ||||||||||||||||||||| |||| ||| ||||||||||||||||||| | ||||||||||| |
|
|
| T |
10588657 |
aagattttaacatgttgttctggtactgattataaaggtcaagaatttaaagctttagtttttgattacatgaaaaatggaagtt----tagaacaatgg |
10588562 |
T |
|
| Q |
253 |
ttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgc |
352 |
Q |
| |
|
| ||||| || | | |||||||||||||||| ||| |||||||||| |||||| ||||| |||| ||||||| ||||||||||| |||||||||| | |
|
|
| T |
10588561 |
cttcatccatggaatgtgaattcagagcatccaagaacgttggaccttgttcatagattaaatatcactatcgatattgcttctgcactacattatcttc |
10588462 |
T |
|
| Q |
353 |
atcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagc |
452 |
Q |
| |
|
|||| ||||||||||| || | ||||||||||| ||||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10588461 |
atcatgaatgtgagcaggtggtccttcattgtgatataaagccaagcaacgtccttcttgacgatgacatggttgctcatgtgagtgattttggcatagc |
10588362 |
T |
|
| Q |
453 |
aacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggta |
541 |
Q |
| |
|
|| | |||||||| |||| | || |||||| || | ||||||||||||||||| ||||| || |||||||| |||||||||||| |
|
|
| T |
10588361 |
aagacttgtctcagttattgaagacacatctcatcaggaaactagtacaattggaattaaagggactgttggctatgctcctccaggta |
10588273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 30 - 544
Target Start/End: Original strand, 10558761 - 10559271
Alignment:
| Q |
30 |
aatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaa |
129 |
Q |
| |
|
|||||| |||| |||| ||| ||| |||||||||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||| |||| |
|
|
| T |
10558761 |
aatcttatgtcagaagataaagttattgctgtgaaggtcctggaccttgaaaagaatggagctcacaagagttttattaccgaatgtaatgcactaaaaa |
10558860 |
T |
|
| Q |
130 |
acattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaa |
229 |
Q |
| |
|
| |||||||| ||||| |||||| ||||||| ||||||||||||| || ||||||||||| ||||| ||||||||||| ||| | ||||||||||| |
|
|
| T |
10558861 |
atattagacatcgaaatctggttaagattttaacttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaa |
10558960 |
T |
|
| Q |
230 |
tggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgt |
329 |
Q |
| |
|
|||||||| ||||| | ||||||||| | ||| | ||| |||||| |||| | ||||||| ||| ||| || | || |||||||| ||||| |
|
|
| T |
10558961 |
tggaagct----tagaaaactggttgcattcaaggatgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgt |
10559056 |
T |
|
| Q |
330 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgct |
429 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||| | |||||||||||||||||||||||||||| ||| | |||| |||| |||||| |
|
|
| T |
10559057 |
tgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgct |
10559156 |
T |
|
| Q |
430 |
catgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctaca |
529 |
Q |
| |
|
||||||||||||||||||||||||| | | |||||| | | |||| |||| |||| | ||||| ||||||||||||||||| || |||||||| |
|
|
| T |
10559157 |
catgtgagtgattttggcatagcaagactcgtctcatctgcggacggtatatctcctaaggaaactagcacaattggaataaaagggactgttggctatg |
10559256 |
T |
|
| Q |
530 |
ctcctccaggtatgt |
544 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
10559257 |
ctcctccaggtatgt |
10559271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 42 - 542
Target Start/End: Original strand, 7192876 - 7193372
Alignment:
| Q |
42 |
gaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacacc |
141 |
Q |
| |
|
|||| ||| |||||||| ||||||||| | ||||| |||||||| |||||| ||||||||| |||| ||||||||||||||| ||||| |||||||| | |
|
|
| T |
7192876 |
gaagataaagttgttgccgtgaaggtcatgaaccttcaaaagaagggagctcacaagagtttcattgctgaatgtaatgcactaaaaaatattagacatc |
7192975 |
T |
|
| Q |
142 |
gaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagct |
241 |
Q |
| |
|
|||| | |||||| |||| ||||||||||| |||||||| |||||||||||||||||||||||| |||| ||| | |||||||| || ||| |||| |
|
|
| T |
7192976 |
gaaatttggttaagattttgacatgttgttccagtacagattacaaaggtcaagaatttaaagctttagtctttgaatacatgaacaacgga----agct |
7193071 |
T |
|
| Q |
242 |
tagaacaatggttgcatcctgagat-tttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcat |
340 |
Q |
| |
|
||||||||||| | |||||| |||| | ||| |||| ||| || ||| |||||||||| ||| || || || ||| | | ||| |||| | || || |
|
|
| T |
7193072 |
tagaacaatggctacatcct-agatcagtgaatgtagagaatcaaagaacgttggaccttgatcaaagattgaatatcgctgttgatattgcctttgtat |
7193170 |
T |
|
| Q |
341 |
tacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtga |
440 |
Q |
| |
|
||||||| || |||| ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||| |
|
|
| T |
7193171 |
tacattaccttcatcttgaatgtgagcaatcgatcattcattgtgatctaaagccaagcaatgtccttcttgacgatgacatggttgctcatgtgagtga |
7193270 |
T |
|
| Q |
441 |
ttttggcatagcaacatttgtctcaaccattggtggtacctctcat-aagaatactagtacaattggaataaaaggaaccgttggctacactcctccagg |
539 |
Q |
| |
|
|||||||||||||| | |||||||| |||| | ||||||||| |||| ||||||||||||||||| ||||| || ||||||| |||||||||| |
|
|
| T |
7193271 |
ttttggcatagcaagacttgtctcagttattgacgacacctctcatcgagaa-actagtacaattggaattaaagggactattggctatgctcctccagg |
7193369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 30 - 454
Target Start/End: Complemental strand, 19606215 - 19605795
Alignment:
| Q |
30 |
aatcttgtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaa |
129 |
Q |
| |
|
|||||| |||| |||| ||| ||| ||||||| |||||||| ||||| ||||||| |||||| ||||||||||||| |||||||||||| ||||||| |
|
|
| T |
19606215 |
aatcttatgtcagaagataaagttattgctgttaaggtcctgaaccttgaaaagaagggagctcacaagagttttattactgaatgtaatgctctcaaaa |
19606116 |
T |
|
| Q |
130 |
acattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaa |
229 |
Q |
| |
|
| |||||||| ||||| | ||||||| ||||||| ||||||||||||| || ||||||||| |||||| ||||||||||| ||| | ||||||| ||| |
|
|
| T |
19606115 |
atattagacatcgaaatttagttaagattttaacttgttgttctagtattgataacaaaggtctagaattcaaagctctagtttttgagtacatgagaaa |
19606016 |
T |
|
| Q |
230 |
tggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgt |
329 |
Q |
| |
|
|||| ||||||||||||||||||||||| | || | ||| |||| ||||||| ||||||| | ||| || || ||||| ||| || ||||||| |
|
|
| T |
19606015 |
tgga----agcttagaacaatggttgcatcccgggacaatgaatgcagatcatccaagaacattgaagtttgagcaaagattaaatatccttgtcgatgt |
19605920 |
T |
|
| Q |
330 |
tgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgct |
429 |
Q |
| |
|
| |||||||||||||||| || ||||| ||||||||||||||| | |||||||||||||||||||||||||||| ||| | | || || || ||||| |
|
|
| T |
19605919 |
ttcttctgcattacattaccttcatcatgaatgtgagcaattggtccttcattgtgatctaaagccaagcaatgtccttattgacgacgatatcgttgca |
19605820 |
T |
|
| Q |
430 |
catgtgagtgattttggcatagcaa |
454 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
19605819 |
catgtgagtgattttggcatagcaa |
19605795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 51 - 502
Target Start/End: Complemental strand, 9836657 - 9836210
Alignment:
| Q |
51 |
gttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcag |
150 |
Q |
| |
|
||||||||| | ||||| || |||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||||| | | |
|
|
| T |
9836657 |
gttgttgctataaaggttctgaacctcaaaaagaagggagctcataagagttttattgctgaatgtaatgcactcaaaaatattagacatcgaaatttgg |
9836558 |
T |
|
| Q |
151 |
ttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaat |
250 |
Q |
| |
|
| |||||| |||||||||||||||||| || || |||||| ||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
9836557 |
tcaaggttataacatgttgttctagtattgattataaaggtggagaatttaaagctttagtttttgattacatgaaaaatgga----agcttagaacaat |
9836462 |
T |
|
| Q |
251 |
ggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatct |
350 |
Q |
| |
|
|| | |||| || | |||||||| |||| | ||||||| |||||| ||| || |||| ||| || ||| |||||||||||||||||||||| |
|
|
| T |
9836461 |
ggctttatccctggacagtggattcagagtatcctagaacattgaaccttgttcaaagactaaatatctccattgatattgcttctgcattacattatct |
9836362 |
T |
|
| Q |
351 |
gcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcata |
450 |
Q |
| |
|
||| |||||||||||| || | |||||||||||| | ||||||||||| | ||||| ||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
9836361 |
tcattgtgaatgtgagcaagtggtcattcattgtgatatcaagccaagcaacatccttctcgatgataacatggttgctcacgtgagtgattttggcata |
9836262 |
T |
|
| Q |
451 |
gcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaa |
502 |
Q |
| |
|
|||| | || ||||| |||||| ||||||||||||||| | |||||||||| |
|
|
| T |
9836261 |
gcaagacttatctcagccattgacggtacctctcataaggaaactagtacaa |
9836210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 10216648 - 10216524
Alignment:
| Q |
516 |
aaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgtttctttgaattctcctatgttttggtgaatacttaatatattacca |
615 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216648 |
aaccgttggctacactcctccaggtatgttctaaatgcttaaatcttccattgtttctttgaattctcctatgttttggtgaatacttaatatattacca |
10216549 |
T |
|
| Q |
616 |
ttgacatagtattaatagcttttgt |
640 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
10216548 |
ttgacatagtattaatagcttttgt |
10216524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 63 - 548
Target Start/End: Complemental strand, 10660402 - 10659921
Alignment:
| Q |
63 |
aaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaa |
162 |
Q |
| |
|
||||| || ||||| ||||| || |||||| |||||| || |||||||||||||||||||| ||||| || || || |||| | || |||||||| | |
|
|
| T |
10660402 |
aaggttctgaaccttcaaaataagggagctcacaagagcttcattgttgaatgtaatgcactaaaaaatatgaggcatagaaatttggtcaaggttttga |
10660303 |
T |
|
| Q |
163 |
catgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctg |
262 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| ||||| ||| |||||||| | |||||||| ||||||||| ||||||||||| | ||||| | |
|
|
| T |
10660302 |
catgttgttcaagtacagattacaaaggtcaagagtttaaggctttagtgtttgaatacatgaacaatggaagcc----tagaacaatggctacatccag |
10660207 |
T |
|
| Q |
263 |
agattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatg |
362 |
Q |
| |
|
|| | ||| ||| | || || | |||||||||| ||| | | || |||||| | || ||||| || ||||||||| || ||||| ||||| |
|
|
| T |
10660206 |
gtataatgaatgcagggattcaaagattgttggaccttgatcaacgactgaatatcattgttgacattgctagtgtattacattaccttcatcacgaatg |
10660107 |
T |
|
| Q |
363 |
tgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtc |
462 |
Q |
| |
|
||||||| | | ||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
10660106 |
tgagcaagcggtcattcattgtgatctaaagccaagtaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtc |
10660007 |
T |
|
| Q |
463 |
tcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttcta |
548 |
Q |
| |
|
||| |||||| | ||||||||| ||| | ||||||||||||||| ||||| || |||||||| ||||||||||||| ||||| |
|
|
| T |
10660006 |
tcagccattgacgatacctctcacaaggaatttagtacaattggaattaaagggactgttggctatgctcctccaggtattttcta |
10659921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 42 - 541
Target Start/End: Complemental strand, 10652540 - 10652045
Alignment:
| Q |
42 |
gaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacacc |
141 |
Q |
| |
|
|||| ||| |||||||| | |||||||| ||||| ||||| || ||| || |||||| || ||||||||||||||||||| ||||| || || || |
|
|
| T |
10652540 |
gaagataaagttgttgccataaaggtcctgaaccttcaaaaaaagggatctcacaagagcttcgttgttgaatgtaatgcactaaaaaatatgaggcata |
10652441 |
T |
|
| Q |
142 |
gaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagct |
241 |
Q |
| |
|
|||| | ||||||||||| ||||||||||| ||||| || |||||||||||||| ||||| ||| |||||||| | |||||||| || |||| | |
|
|
| T |
10652440 |
gaaatttggttaaggttttgacatgttgttcgagtaccgattacaaaggtcaagagtttaaggctttagtgtttgaatacatgaacaacggaaacc---- |
10652345 |
T |
|
| Q |
242 |
tagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcatt |
341 |
Q |
| |
|
||||||||||| | ||||| | || | ||| ||| | || || || |||||||||| ||| | | || |||||| | || ||||||||| ||| |
|
|
| T |
10652344 |
tagaacaatggctacatccaggtataatgaatgcagggattcaaagaatgttggaccttgatcaacgactgaatatcattgttgacattgcttctgtatt |
10652245 |
T |
|
| Q |
342 |
acattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgat |
441 |
Q |
| |
|
|||||| || ||||| |||||||||||| | | ||||||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||||||| |
|
|
| T |
10652244 |
acattaccttcatcatgaatgtgagcaagcggtcattcattgtgatctaaagccaagtaatgtccttcttgatgacgacatggttgctcatgtgagtgat |
10652145 |
T |
|
| Q |
442 |
tttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggta |
541 |
Q |
| |
|
||||||||||||| | |||||||| |||||| ||||||| | ||| | ||||||||||||||||| ||||| || |||||||| |||||||||||| |
|
|
| T |
10652144 |
tttggcatagcaagacttgtctcagccattgacaatacctctaacaaggaaactagtacaattggaattaaagggactgttggctatgctcctccaggta |
10652045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 692 - 819
Target Start/End: Complemental strand, 10210593 - 10210466
Alignment:
| Q |
692 |
tctttgtctcctaatgatttttccagtgaaatgttgaagatgttgagtctgaaagatattaaaggaatggtggctaagggaatatgcatcacaaggtcca |
791 |
Q |
| |
|
|||||||||||||| ||| | |||||||||| | || |||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10210593 |
tctttgtctcctaaagatatatccagtgaaaggctgcagatgttgagtcagagagatattaaaggaatggtggctaagggaatatgcatcaccaggtcca |
10210494 |
T |
|
| Q |
792 |
ggagtttcatacagccagatgtatcaaa |
819 |
Q |
| |
|
||||||||||||| | |||||||||||| |
|
|
| T |
10210493 |
ggagtttcatacaactagatgtatcaaa |
10210466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 79 - 335
Target Start/End: Original strand, 9825008 - 9825261
Alignment:
| Q |
79 |
aaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtac |
178 |
Q |
| |
|
||||||| |||||| ||||||||||||| |||||||||| ||||||||| |||||||| ||||| | |||||| |||||||||||| |||||||| |
|
|
| T |
9825008 |
aaaagaagggagctcacaagagttttattaccgaatgtaatgaactcaaaaatattagacatcgaaatttggttaagattttaacatgtttttctagtat |
9825107 |
T |
|
| Q |
179 |
agactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcaga |
278 |
Q |
| |
|
|| |||||||| |||||||| ||||||||||| ||| | |||||| ||||||| | |||||||||||||||||| |||| ||| ||| ||| |
|
|
| T |
9825108 |
cgattacaaagggcaagaattcaaagctctagtttttgagtacatgcaaaatggga---agcttagaacaatggttgaatccaaggatagagaatgtaga |
9825204 |
T |
|
| Q |
279 |
gcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttc |
335 |
Q |
| |
|
|||||| | ||||||||| |||| ||| || || || |||||||| ||||||||||| |
|
|
| T |
9825205 |
gcatcctagaacattggatcttgatcaaagattgaatatcattattgatgttgcttc |
9825261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 640 - 788
Target Start/End: Original strand, 10108510 - 10108665
Alignment:
| Q |
640 |
tgttatttatctgcgtatcctgaacccatccttcaccattctatcatc------accatctttgtctcctaatgatttttccagtgaaatgttgaagatg |
733 |
Q |
| |
|
|||||||||||||| | |||||||||||| |||||| |||| | |||| ||| |||||||||||||| ||| |||||||||||| | || ||||| |
|
|
| T |
10108510 |
tgttatttatctgcttttcctgaacccattcttcacgattccaccatcgccgacaccgtctttgtctcctaaagatatttccagtgaaaggctgcagatg |
10108609 |
T |
|
| Q |
734 |
ttgagtctgaaagatattaaa-ggaatggtggctaagggaatatgcatcacaaggt |
788 |
Q |
| |
|
||||||| || |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10108610 |
ttgagtcagagagatattaaaaggaatggtggctaagggaatatgcatcacaaggt |
10108665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 237
Target Start/End: Complemental strand, 9850985 - 9850843
Alignment:
| Q |
95 |
caagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaa |
194 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||| |||||||| ||||| | |||||| ||||||| | ||||||||||| || |||||||| || |
|
|
| T |
9850985 |
caagagttttattacggaatgtaatgccctcaaaat-attagacatcgaaatttggttaagattttaacttcttgttctagtatcgattacaaagggcat |
9850887 |
T |
|
| Q |
195 |
gaatttaaa-gctctagtgttttattacatgaaaaatggaagct |
237 |
Q |
| |
|
||||| ||| |||||||| ||||| ||||||| ||||||||||| |
|
|
| T |
9850886 |
gaattcaaaagctctagttttttagtacatgataaatggaagct |
9850843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 10550679 - 10550847
Alignment:
| Q |
66 |
gtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacat |
165 |
Q |
| |
|
||||||||||| ||||||| |||| | ||||||||| |||| ||||||||||||||| ||||| ||||| ||| |||| |||||| |||| || | |
|
|
| T |
10550679 |
gtcctaaaccttaaaaagaagggagttcacaagagtttcattgctgaatgtaatgcactaaaaaatattaggcacagaaatctagttaaaattttgactt |
10550778 |
T |
|
| Q |
166 |
gttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaa |
234 |
Q |
| |
|
||||||| || ||||| |||||||| || ||||||||||| || ||| | ||||||| |||||||| |
|
|
| T |
10550779 |
gttgttccagcacagattacaaaggaagtgagtttaaagctcttgtatttgagtacatgagaaatggaa |
10550847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 638
Target Start/End: Original strand, 10582307 - 10582450
Alignment:
| Q |
494 |
ctagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgtttctttgaattctcctatgttttg |
593 |
Q |
| |
|
||||||||||||| | ||||||||| |||||||| ||| || || || || ||||| |||| |||||||||||||||||| ||| ||||||| |||| |
|
|
| T |
10582307 |
ctagtacaattgggacaaaaggaacagttggctatgctcttctagatacgtactaaagtcttgaatcttccattgtttcttttaataatcctatg-tttg |
10582405 |
T |
|
| Q |
594 |
gtgaatacttaatatattaccattgacatagtattaatagctttt |
638 |
Q |
| |
|
||| |||||| || ||||| ||||||||||||| ||||||| |
|
|
| T |
10582406 |
gtgttgacttaaaattataccagcgacatagtattaacagctttt |
10582450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 656 - 819
Target Start/End: Complemental strand, 9683233 - 9683085
Alignment:
| Q |
656 |
atcctgaacccatccttcaccattctatcatcaccatctttgtctcctaatgatttttccagtgaaatgttgaagatgttgagtctgaaagatattaaag |
755 |
Q |
| |
|
|||||| ||||||||||||| |||| |||| | || |||||||||||||| |||||||| | | |||||||||||| ||| ||||||| |
|
|
| T |
9683233 |
atcctggacccatccttcacaattccatcaactccgtctttgtctcctaaagatttttc---------gctccagatgttgagtcatgtagacattaaag |
9683143 |
T |
|
| Q |
756 |
gaatggtggctaagggaatatgcatcacaaggtccaggagtttcatacagccagatgtatcaaa |
819 |
Q |
| |
|
||||||| |||| |||||||||||||||| ||||||| |||| |||||||||||||||| |
|
|
| T |
9683142 |
gaatggttgctaggggaatatgcatcaca------aggagttccataaagccagatgtatcaaa |
9683085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 273; Significance: 1e-152; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 42 - 579
Target Start/End: Original strand, 12899441 - 12899974
Alignment:
| Q |
42 |
gaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacacc |
141 |
Q |
| |
|
|||| |||||||||||| || |||||| | || || ||||| || || ||| ||||||||| ||| | |||||||||||||||||||||||| |||||| |
|
|
| T |
12899441 |
gaagataatgttgttgcagtaaaggtcttgaatctgcaaaaaaagggtgctcacaagagtttcattttagaatgtaatgcactcaaaaacattcgacacc |
12899540 |
T |
|
| Q |
142 |
gaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagct |
241 |
Q |
| |
|
|||| | |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| |
|
|
| T |
12899541 |
gaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtttttgaatacatgaaaaatggaagct---- |
12899636 |
T |
|
| Q |
242 |
tagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcatt |
341 |
Q |
| |
|
||||||||||||| ||||| |||| ||| ||| || | | ||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
12899637 |
tagaacaatggttacatcccgagactttgaatgcaaatcctccaacaacattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcatt |
12899736 |
T |
|
| Q |
342 |
acattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgat |
441 |
Q |
| |
|
||||||||| |||| ||||||||||||||| | ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12899737 |
acattatcttcatcgagaatgtgagcaattagtctttcattgtgatataaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgat |
12899836 |
T |
|
| Q |
442 |
tttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggta |
541 |
Q |
| |
|
||||||||||||| | |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||| |||| |
|
|
| T |
12899837 |
tttggcatagcaagacttgtctcaacaatttctggtacctctcataagaatactagcacaattggaataaaaggaacagttggttatgctcctccgggta |
12899936 |
T |
|
| Q |
542 |
tgttctaaatgcttgcatcttccattgtttctttgaat |
579 |
Q |
| |
|
|||| ||||| |||| |||||||||||||| ||||||| |
|
|
| T |
12899937 |
tgttttaaattcttgaatcttccattgtttttttgaat |
12899974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 36 - 571
Target Start/End: Original strand, 12932144 - 12932675
Alignment:
| Q |
36 |
gtgtcggaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacatta |
135 |
Q |
| |
|
||||| |||| |||||||||||| || |||||| | || || ||||| || |||||| ||||||||| |||||||||||||| ||||||||||| |||| |
|
|
| T |
12932144 |
gtgtcagaagataatgttgttgcagtaaaggtcttgaatctgcaaaaaaagggagctcacaagagtttcattgttgaatgtaacgcactcaaaaatatta |
12932243 |
T |
|
| Q |
136 |
gacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaag |
235 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||| ||| | ||||||||||||||||| |
|
|
| T |
12932244 |
gacaccgaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagcactagtttttgaatacatgaaaaatggaag |
12932343 |
T |
|
| Q |
236 |
ctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttc |
335 |
Q |
| |
|
|| ||||||| ||||| |||||||||| ||| ||| || | | ||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
12932344 |
ct----tagaacagtggttacatcctgagactttgaatgcaaatcctccaacaacattgaaccttggtcatagattaaacatcatcatcgatgttgcttc |
12932439 |
T |
|
| Q |
336 |
tgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtg |
435 |
Q |
| |
|
|||||| ||||| || |||| |||||||||||| || || |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
12932440 |
tgcattgcattaccttcatcgagaatgtgagcagttaatccttcattgtgatctaaaaccaagcaatgtccttcttgatgatgacatggttgctcatgtg |
12932539 |
T |
|
| Q |
436 |
agtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctc |
535 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||| ||||||||| ||||||||||||| ||||| ||| |||||||||| ||||| || |||| | |
|
|
| T |
12932540 |
agtgattttggcatagcaagacttgtctcaaccatttccggtacctctaataagaatactagcacaatcggagtaaaaggaacagttggttatgctccac |
12932639 |
T |
|
| Q |
536 |
caggtatgttctaaatgcttgcatcttccattgttt |
571 |
Q |
| |
|
| |||||||| ||||| |||| |||||||||||||| |
|
|
| T |
12932640 |
cgggtatgttttaaattcttgaatcttccattgttt |
12932675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 42 - 579
Target Start/End: Original strand, 12957949 - 12958482
Alignment:
| Q |
42 |
gaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacacc |
141 |
Q |
| |
|
|||| |||||||||||| | || ||| | |||||||| || || |||||| ||||||||| |||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
12957949 |
gaagataatgttgttgcaataaaagtcttgaacctccagaaaaagggagctcacaagagtttcattgttgaatgtaacgcactcaaaaatattagacacc |
12958048 |
T |
|
| Q |
142 |
gaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagct |
241 |
Q |
| |
|
|||| | |||| ||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| | |||||| |||||||||||| |
|
|
| T |
12958049 |
gaaatttggttagggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtttttgaatacatggaaaatggaagct---- |
12958144 |
T |
|
| Q |
242 |
tagaacaatggttgcatcctgagattttaaattcagag-catccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcat |
340 |
Q |
| |
|
||||||| ||||| |||||| | ||||| ||| | ||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
12958145 |
tagaacagtggttacatcctcaaattttgaatgc-gagtcctccaacaacattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcat |
12958243 |
T |
|
| Q |
341 |
tacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtga |
440 |
Q |
| |
|
|||||||||| |||| |||||||||||| || || |||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
12958244 |
tacattatcttcatcgagaatgtgagcagttaatccttcactgtgatctaaagccaagcaatgtccttcttgatggtgacatggttgctcatgtgagtga |
12958343 |
T |
|
| Q |
441 |
ttttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggt |
540 |
Q |
| |
|
|||||| ||||||| | |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||| || ||||||| ||| |
|
|
| T |
12958344 |
ttttggaatagcaagacttgtctcaaccatttccggtacctctaataagaatactagcacaattggaataaaaggaacagttggttatgctcctccgggt |
12958443 |
T |
|
| Q |
541 |
atgttctaaatgcttgcatcttccattgtttctttgaat |
579 |
Q |
| |
|
||||| ||||| |||| |||||||||||||| ||||||| |
|
|
| T |
12958444 |
atgttttaaattcttgaatcttccattgtttttttgaat |
12958482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 42 - 579
Target Start/End: Original strand, 12907061 - 12907594
Alignment:
| Q |
42 |
gaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacacc |
141 |
Q |
| |
|
|||| |||||||||||| || |||||| | |||||||||| || || ||| ||| ||||| |||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
12907061 |
gaagataatgttgttgcagtaaaggtcttgaacctccaaacaaagggcgctcacaaaagtttcattgttgaatgtaacgcactcaaaaatattagacaca |
12907160 |
T |
|
| Q |
142 |
gaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagct |
241 |
Q |
| |
|
|||| | |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| |
|
|
| T |
12907161 |
gaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtttttgaatacatgaaaaatggaagct---- |
12907256 |
T |
|
| Q |
242 |
tagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcatt |
341 |
Q |
| |
|
||||||| ||||| |||||||| | ||| ||| || | | ||||| ||||||| ||||||||| ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
12907257 |
tagaacagtggttacatcctgaaactttgaatgcaaatcctccaacaacattgaaccttggtcttagattaaacatcatcatcgatgttgcttctgcatt |
12907356 |
T |
|
| Q |
342 |
acattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgat |
441 |
Q |
| |
|
||||||||| |||| |||||||||||| || || | |||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||| |
|
|
| T |
12907357 |
acattatcttcatcgagaatgtgagcagttaatcctccattgtgatctaaaaccaagcaatgtccttcttgatgatgacatggttgctcatttgagtgat |
12907456 |
T |
|
| Q |
442 |
tttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggta |
541 |
Q |
| |
|
||||||||||||| | |||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||| ||||| || |||| || |||| |
|
|
| T |
12907457 |
tttggcatagcaagacttgtctcaaccatttctggtacctctcataagaatactagcataatcggaataaaaggaacagttggttatgctccaccgggta |
12907556 |
T |
|
| Q |
542 |
tgttctaaatgcttgcatcttccattgtttctttgaat |
579 |
Q |
| |
|
|||| ||||| ||| |||||||||||||| ||||||| |
|
|
| T |
12907557 |
tgttttaaattctttaatcttccattgtttttttgaat |
12907594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 42 - 571
Target Start/End: Original strand, 12948515 - 12949040
Alignment:
| Q |
42 |
gaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacacc |
141 |
Q |
| |
|
|||| |||||||||||| || || ||| | |||||||| || || |||||| ||||||||| |||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
12948515 |
gaagataatgttgttgcagtaaaagtcttgaacctccagaaaaagggagctcacaagagtttcattgttgaatgtaatgcactaaaaaatattagacacc |
12948614 |
T |
|
| Q |
142 |
gaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagct |
241 |
Q |
| |
|
|||| | |||||||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||| ||| | ||||||||||||||||||| |
|
|
| T |
12948615 |
gaaatttggttaaggttttaacatgttgttctagcacaaataacaaaggccaagaatttaaagctctagtttttgaatacatgaaaaatggaagct---- |
12948710 |
T |
|
| Q |
242 |
tagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcatt |
341 |
Q |
| |
|
||||||| ||||| |||||||||| ||| ||| || | | ||||| ||||||| ||||| ||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12948711 |
tagaacagtggttacatcctgagactttgaatgcaaatcctccaacaacattgaaccttcgtcgtagattaaacatcattatcgatgttgcttctgcatt |
12948810 |
T |
|
| Q |
342 |
acattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgat |
441 |
Q |
| |
|
||||||||| |||| | ||||||||||||| | |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12948811 |
acattatcttcatcgataatgtgagcaattagtccttcattgtgatctaaaaccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgat |
12948910 |
T |
|
| Q |
442 |
tttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggta |
541 |
Q |
| |
|
||||||||||||| | |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||| || |||| || |||| |
|
|
| T |
12948911 |
tttggcatagcaagacttgtctcaaccatttccagtacctctaataagaatactagtacaattggaataaaaggaacagttggttatgctccaccgggta |
12949010 |
T |
|
| Q |
542 |
tgttctaaatgcttgcatcttccattgttt |
571 |
Q |
| |
|
||| || || |||| |||||||||||||| |
|
|
| T |
12949011 |
cgttttacattcttgaatcttccattgttt |
12949040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 42 - 571
Target Start/End: Complemental strand, 17923741 - 17923216
Alignment:
| Q |
42 |
gaagttaatgttgttgctgtgaaggtcctaaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacacc |
141 |
Q |
| |
|
|||| |||||||||||| || || ||| | |||||||| || || |||||| ||||||||| ||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
17923741 |
gaagataatgttgttgcagttaaagtcttgaacctccataaaaagggagctcacaagagtttcgttgttgaatgtaacgcactcaaaaatattagacacc |
17923642 |
T |
|
| Q |
142 |
gaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagct |
241 |
Q |
| |
|
|||| | |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| |
|
|
| T |
17923641 |
gaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtttttgaatacatgaaaaatggaagct---- |
17923546 |
T |
|
| Q |
242 |
tagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcatt |
341 |
Q |
| |
|
||||||| ||||| |||||||||| ||| ||| || | | ||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
17923545 |
tagaacagtggttacatcctgagactttgaatgcaaatcctccaacaacattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcatt |
17923446 |
T |
|
| Q |
342 |
acattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgat |
441 |
Q |
| |
|
||||| || |||| |||||||||||| || || |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17923445 |
gcattaccttcatcgagaatgtgagcagttaatccttcattgtgatctaaaaccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgat |
17923346 |
T |
|
| Q |
442 |
tttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggta |
541 |
Q |
| |
|
||||||||||||| | |||||||||||||| ||||||||| |||||||||||||||| || |||||||||||||| ||||| || |||| | |||| |
|
|
| T |
17923345 |
tttggcatagcaagacttgtctcaaccatttccggtacctctaataagaatactagtacgatcggaataaaaggaacagttggttatgctccatcgggta |
17923246 |
T |
|
| Q |
542 |
tgttctaaatgcttgcatcttccattgttt |
571 |
Q |
| |
|
|||| ||||| |||| ||||| | |||||| |
|
|
| T |
17923245 |
tgttttaaattcttgaatcttgctttgttt |
17923216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 225; Significance: 1e-123; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 150 - 579
Target Start/End: Original strand, 7272 - 7697
Alignment:
| Q |
150 |
gttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaa |
249 |
Q |
| |
|
|||| ||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| ||||||| |
|
|
| T |
7272 |
gttagggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtttttgaatacatgaaaaatggaagct----tagaacag |
7367 |
T |
|
| Q |
250 |
tggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatc |
349 |
Q |
| |
|
||||| |||||||||| ||| ||| || | | ||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
7368 |
tggttacatcctgagactttgaatgcaaatcctccaataacattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcattacattaac |
7467 |
T |
|
| Q |
350 |
tgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcat |
449 |
Q |
| |
|
| |||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7468 |
ttcatcgagaatgtgagcaattaatacttcattgtgatctaaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcat |
7567 |
T |
|
| Q |
450 |
agcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaa |
549 |
Q |
| |
|
||||| | |||||||||||||| |||||| ||| ||||||||||||| ||||| |||||||||||||| | ||| || |||| || |||||||| ||| |
|
|
| T |
7568 |
agcaagacttgtctcaaccatttctggtacgtctaataagaatactagcacaatcggaataaaaggaacagctggttatgctccaccgggtatgttttaa |
7667 |
T |
|
| Q |
550 |
atgcttgcatcttccattgtttctttgaat |
579 |
Q |
| |
|
|| |||| |||||||||||||| ||||||| |
|
|
| T |
7668 |
attcttgaatcttccattgtttttttgaat |
7697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 81 - 454
Target Start/End: Complemental strand, 31467461 - 31467092
Alignment:
| Q |
81 |
aagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtacag |
180 |
Q |
| |
|
||||| |||||| ||||||||| ||| |||||| |||||||||||||| |||||||||||||| | |||||| |||||||| | ||||| ||||||| |
|
|
| T |
31467461 |
aagaaaggagctcacaagagtttccttgctgaatgcaatgcactcaaaaatattagacaccgaaatttggttaagattttaacaagctgttccagtacag |
31467362 |
T |
|
| Q |
181 |
actacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcagagc |
280 |
Q |
| |
|
| | ||||| |||||||||||||||||| || || | ||||||||||| ||| ||||||||| ||||||||||| | | || | ||| | |
|
|
| T |
31467361 |
atttcaaagatcaagaatttaaagctcttgttttcgagtacatgaaaaacgga----agcttagaaagttggttgcatccagcaaaagaaattgcaggtc |
31467266 |
T |
|
| Q |
281 |
atccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattca |
380 |
Q |
| |
|
|||||||||| | || | || |||||||| || ||||| || |||||||| ||||| |||||||| ||||| |||||| ||||| | ||||| |
|
|
| T |
31467265 |
cagaaaaaacattgaatctagcacaaaggttaaatattattattgacgttgcttcggcatttcattatcttcatcatgaatgtcagcaacctgtcattca |
31467166 |
T |
|
| Q |
381 |
ttgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaa |
454 |
Q |
| |
|
||||||| ||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
31467165 |
ttgtgatttaaagcctagcaacgttcttcttgatgattctatggtagctcatgtgagtgattttggcatagcaa |
31467092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 376 - 446
Target Start/End: Original strand, 28605824 - 28605894
Alignment:
| Q |
376 |
attcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttgg |
446 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
28605824 |
attcattgtgatttaaagccaagcaatattcttcttcataatgacatggttgctcatgtgagtgattttgg |
28605894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 48; Significance: 5e-18; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 377 - 452
Target Start/End: Complemental strand, 39875899 - 39875824
Alignment:
| Q |
377 |
ttcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagc |
452 |
Q |
| |
|
||||||||||| |||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
39875899 |
ttcattgtgatttaaaaccaagcaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcttagc |
39875824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 377 - 452
Target Start/End: Complemental strand, 39884022 - 39883947
Alignment:
| Q |
377 |
ttcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagc |
452 |
Q |
| |
|
||||||||||| |||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
39884022 |
ttcattgtgatttaaaaccaagcaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcttagc |
39883947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 377 - 452
Target Start/End: Complemental strand, 39890976 - 39890901
Alignment:
| Q |
377 |
ttcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagc |
452 |
Q |
| |
|
||||||||||| |||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
39890976 |
ttcattgtgatttaaaaccaagcaatgtccttcttgaagatgacatggttgctcatgtgagtgattttggcttagc |
39890901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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