View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19510_high_41 (Length: 237)

Name: NF19510_high_41
Description: NF19510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19510_high_41
NF19510_high_41
[»] chr8 (43 HSPs)
chr8 (1-237)||(32974578-32974813)
chr8 (200-237)||(10579025-10579062)
chr8 (200-237)||(15287163-15287200)
chr8 (200-237)||(15467532-15467569)
chr8 (205-237)||(32974293-32974325)
chr8 (202-237)||(13155414-13155449)
chr8 (202-237)||(28237539-28237574)
chr8 (203-237)||(8082761-8082795)
chr8 (203-237)||(10675358-10675392)
chr8 (203-237)||(13155669-13155703)
chr8 (203-237)||(34872687-34872721)
chr8 (203-237)||(42129137-42129171)
chr8 (204-237)||(6472078-6472111)
chr8 (204-237)||(10167504-10167537)
chr8 (204-237)||(15104822-15104855)
chr8 (203-236)||(15287421-15287454)
chr8 (203-236)||(15467790-15467823)
chr8 (204-237)||(16355839-16355872)
chr8 (204-237)||(32374774-32374807)
chr8 (204-237)||(32379198-32379231)
chr8 (204-237)||(32433153-32433186)
chr8 (203-236)||(34058536-34058569)
chr8 (204-237)||(36683367-36683400)
chr8 (204-237)||(41738688-41738721)
chr8 (204-237)||(43165801-43165834)
chr8 (204-237)||(43641575-43641608)
chr8 (204-236)||(2060752-2060784)
chr8 (204-236)||(4136844-4136876)
chr8 (205-237)||(7057441-7057473)
chr8 (205-237)||(7288004-7288036)
chr8 (205-237)||(10167757-10167789)
chr8 (205-237)||(10579282-10579314)
chr8 (205-237)||(11140905-11140937)
chr8 (204-236)||(12616258-12616290)
chr8 (205-237)||(15105074-15105106)
chr8 (200-236)||(16728567-16728603)
chr8 (204-236)||(22849261-22849293)
chr8 (205-237)||(28640231-28640263)
chr8 (204-236)||(30610909-30610941)
chr8 (204-236)||(32098584-32098616)
chr8 (204-236)||(37943158-37943190)
chr8 (205-237)||(39328981-39329013)
chr8 (205-237)||(39329238-39329270)
[»] chr3 (31 HSPs)
chr3 (201-237)||(25703705-25703741)
chr3 (202-237)||(33757395-33757430)
chr3 (204-237)||(20221850-20221883)
chr3 (205-237)||(31270848-31270880)
chr3 (202-237)||(35119305-35119340)
chr3 (203-237)||(2008673-2008707)
chr3 (203-237)||(17604968-17605002)
chr3 (203-237)||(36711065-36711099)
chr3 (203-237)||(40593862-40593896)
chr3 (203-237)||(42928655-42928689)
chr3 (203-237)||(55453865-55453899)
chr3 (204-237)||(11691838-11691871)
chr3 (204-237)||(11935774-11935807)
chr3 (204-237)||(11936027-11936060)
chr3 (203-236)||(19878684-19878717)
chr3 (204-237)||(20222103-20222136)
chr3 (200-237)||(24681975-24682012)
chr3 (204-237)||(45394412-45394445)
chr3 (200-236)||(1486722-1486758)
chr3 (204-236)||(4736069-4736101)
chr3 (200-236)||(8338807-8338843)
chr3 (205-237)||(9557563-9557595)
chr3 (204-236)||(16787784-16787816)
chr3 (200-236)||(25577855-25577891)
chr3 (205-237)||(29359029-29359061)
chr3 (205-237)||(29843637-29843669)
chr3 (202-234)||(33479437-33479469)
chr3 (205-237)||(36772804-36772836)
chr3 (205-237)||(44035842-44035874)
chr3 (205-237)||(50001353-50001385)
chr3 (204-236)||(53327963-53327995)
[»] chr1 (34 HSPs)
chr1 (202-237)||(51345448-51345483)
chr1 (204-237)||(5562890-5562923)
chr1 (204-237)||(33253939-33253972)
chr1 (204-237)||(33274111-33274144)
chr1 (201-237)||(30925428-30925464)
chr1 (205-237)||(33566791-33566823)
chr1 (201-237)||(35937670-35937706)
chr1 (205-237)||(43741374-43741406)
chr1 (206-237)||(26922413-26922444)
chr1 (205-236)||(28750304-28750335)
chr1 (202-237)||(52752197-52752232)
chr1 (203-237)||(6057353-6057387)
chr1 (203-237)||(21654065-21654099)
chr1 (203-237)||(51345671-51345705)
chr1 (203-237)||(51353343-51353377)
chr1 (202-236)||(52710649-52710683)
chr1 (204-237)||(3617132-3617165)
chr1 (204-237)||(5333738-5333771)
chr1 (204-237)||(7065224-7065257)
chr1 (204-237)||(14421748-14421781)
chr1 (204-237)||(26922160-26922193)
chr1 (204-237)||(43684698-43684731)
chr1 (207-236)||(48610140-48610169)
chr1 (200-237)||(48795436-48795473)
chr1 (204-237)||(52752452-52752485)
chr1 (200-236)||(2207046-2207082)
chr1 (205-237)||(10066156-10066188)
chr1 (203-235)||(11419719-11419751)
chr1 (204-236)||(14673856-14673888)
chr1 (204-236)||(19684320-19684352)
chr1 (204-236)||(40723786-40723818)
chr1 (205-237)||(46136895-46136927)
chr1 (201-237)||(46185046-46185082)
chr1 (205-237)||(51053513-51053545)
[»] chr5 (44 HSPs)
chr5 (203-237)||(32519054-32519088)
chr5 (200-237)||(14311381-14311418)
chr5 (201-237)||(7201122-7201158)
chr5 (201-237)||(27279747-27279783)
chr5 (205-237)||(38265337-38265369)
chr5 (201-237)||(39084666-39084702)
chr5 (202-237)||(7200868-7200903)
chr5 (202-237)||(39084411-39084446)
chr5 (203-237)||(1950151-1950185)
chr5 (203-237)||(3850240-3850274)
chr5 (203-237)||(9129748-9129782)
chr5 (203-237)||(10862433-10862467)
chr5 (203-237)||(18279319-18279353)
chr5 (203-237)||(30187720-30187754)
chr5 (203-237)||(37109585-37109619)
chr5 (203-237)||(41621373-41621407)
chr5 (203-237)||(42396797-42396831)
chr5 (204-237)||(7401416-7401449)
chr5 (204-237)||(7949160-7949193)
chr5 (203-236)||(8315013-8315046)
chr5 (204-237)||(10862180-10862213)
chr5 (204-237)||(12256428-12256461)
chr5 (204-237)||(14347291-14347324)
chr5 (204-237)||(18279091-18279124)
chr5 (204-237)||(18279573-18279606)
chr5 (204-237)||(19617909-19617942)
chr5 (204-237)||(21052302-21052335)
chr5 (203-236)||(24334635-24334668)
chr5 (204-237)||(28770573-28770606)
chr5 (204-237)||(29785611-29785644)
chr5 (204-237)||(30239230-30239263)
chr5 (204-237)||(32905897-32905930)
chr5 (204-237)||(33866789-33866822)
chr5 (204-237)||(39985968-39986001)
chr5 (205-237)||(857686-857718)
chr5 (201-237)||(7948949-7948985)
chr5 (204-236)||(8979784-8979816)
chr5 (205-237)||(14311129-14311161)
chr5 (204-236)||(17640138-17640170)
chr5 (205-237)||(18278839-18278871)
chr5 (201-237)||(19089250-19089286)
chr5 (205-237)||(25353535-25353567)
chr5 (205-237)||(27279972-27280004)
chr5 (205-237)||(28770825-28770857)
[»] chr7 (29 HSPs)
chr7 (204-237)||(8238633-8238666)
chr7 (201-237)||(19578997-19579033)
chr7 (205-237)||(27689541-27689573)
chr7 (201-237)||(40619675-40619711)
chr7 (201-236)||(5029500-5029535)
chr7 (203-237)||(6669670-6669704)
chr7 (203-237)||(19579252-19579286)
chr7 (203-237)||(21047556-21047590)
chr7 (203-237)||(37143103-37143137)
chr7 (203-237)||(37220163-37220197)
chr7 (203-237)||(38730472-38730506)
chr7 (207-237)||(48549558-48549588)
chr7 (204-237)||(21994025-21994058)
chr7 (204-237)||(28731515-28731548)
chr7 (204-237)||(30085331-30085364)
chr7 (204-237)||(33253832-33253865)
chr7 (208-237)||(37331403-37331432)
chr7 (204-237)||(41492585-41492618)
chr7 (208-237)||(44158182-44158211)
chr7 (204-237)||(44887558-44887591)
chr7 (204-237)||(46789558-46789591)
chr7 (205-237)||(2285610-2285642)
chr7 (205-237)||(8238886-8238918)
chr7 (205-237)||(8761380-8761412)
chr7 (201-237)||(23561170-23561206)
chr7 (204-236)||(33772674-33772706)
chr7 (204-236)||(33801191-33801223)
chr7 (205-237)||(39535153-39535185)
chr7 (205-237)||(48647874-48647906)
[»] chr6 (25 HSPs)
chr6 (204-237)||(17205241-17205274)
chr6 (201-237)||(19779539-19779575)
chr6 (202-237)||(12757488-12757523)
chr6 (203-237)||(8979082-8979116)
chr6 (203-237)||(9242375-9242409)
chr6 (203-237)||(12145314-12145348)
chr6 (203-237)||(16539508-16539542)
chr6 (203-237)||(32647231-32647265)
chr6 (204-237)||(584552-584585)
chr6 (204-237)||(1130968-1131001)
chr6 (208-237)||(14863798-14863827)
chr6 (204-237)||(18501719-18501752)
chr6 (203-236)||(20510309-20510342)
chr6 (204-237)||(22787198-22787231)
chr6 (204-237)||(25059350-25059383)
chr6 (204-237)||(32462118-32462151)
chr6 (204-237)||(32646978-32647011)
chr6 (205-237)||(5385533-5385565)
chr6 (205-237)||(6153998-6154030)
chr6 (205-237)||(7620947-7620979)
chr6 (205-237)||(7621199-7621231)
chr6 (201-237)||(12757232-12757268)
chr6 (201-237)||(30753235-30753271)
chr6 (205-237)||(31052095-31052127)
chr6 (205-237)||(31052321-31052353)
[»] chr4 (37 HSPs)
chr4 (204-237)||(40603621-40603654)
chr4 (205-237)||(11997392-11997424)
chr4 (201-237)||(49488026-49488062)
chr4 (202-237)||(29520714-29520749)
chr4 (202-237)||(48737890-48737925)
chr4 (203-237)||(1842669-1842703)
chr4 (203-237)||(7603825-7603859)
chr4 (203-237)||(8412298-8412332)
chr4 (203-237)||(10502377-10502411)
chr4 (203-237)||(22519516-22519550)
chr4 (203-237)||(23625104-23625138)
chr4 (203-237)||(46281467-46281501)
chr4 (203-237)||(51948072-51948106)
chr4 (204-237)||(3060599-3060632)
chr4 (204-237)||(6452253-6452286)
chr4 (204-237)||(8459343-8459376)
chr4 (204-237)||(8562648-8562681)
chr4 (204-237)||(8562901-8562934)
chr4 (204-237)||(27704504-27704537)
chr4 (203-236)||(28756938-28756971)
chr4 (204-237)||(44595985-44596018)
chr4 (204-237)||(49487773-49487806)
chr4 (200-237)||(53230666-53230703)
chr4 (205-237)||(2251576-2251608)
chr4 (205-237)||(11338938-11338970)
chr4 (205-237)||(11339190-11339222)
chr4 (204-236)||(13202848-13202880)
chr4 (201-237)||(22638290-22638326)
chr4 (205-237)||(23256957-23256989)
chr4 (205-237)||(23257209-23257241)
chr4 (205-237)||(23275087-23275119)
chr4 (200-236)||(24281318-24281354)
chr4 (205-237)||(26441407-26441439)
chr4 (205-237)||(27704756-27704788)
chr4 (205-237)||(42513435-42513467)
chr4 (204-236)||(45918565-45918597)
chr4 (205-237)||(50309661-50309693)
[»] scaffold0991 (1 HSPs)
scaffold0991 (201-237)||(658-694)
[»] scaffold0233 (1 HSPs)
scaffold0233 (205-237)||(18418-18450)
[»] scaffold0045 (2 HSPs)
scaffold0045 (201-237)||(21968-22004)
scaffold0045 (203-237)||(22224-22258)
[»] chr2 (31 HSPs)
chr2 (201-237)||(5038393-5038429)
chr2 (205-237)||(20892562-20892594)
chr2 (202-237)||(644751-644786)
chr2 (202-237)||(36065706-36065741)
chr2 (202-237)||(36387054-36387089)
chr2 (203-237)||(1598931-1598965)
chr2 (203-237)||(16707237-16707271)
chr2 (203-237)||(45194524-45194558)
chr2 (204-237)||(2112397-2112430)
chr2 (204-237)||(4902495-4902528)
chr2 (204-237)||(4949893-4949926)
chr2 (203-236)||(10215105-10215138)
chr2 (204-237)||(11554265-11554298)
chr2 (204-237)||(11554519-11554552)
chr2 (204-237)||(18479508-18479541)
chr2 (204-237)||(18677057-18677090)
chr2 (204-237)||(29950572-29950605)
chr2 (204-237)||(34423441-34423474)
chr2 (204-237)||(36065961-36065994)
chr2 (204-237)||(45195015-45195048)
chr2 (204-237)||(45255115-45255148)
chr2 (205-237)||(128900-128932)
chr2 (205-237)||(8846729-8846761)
chr2 (205-237)||(11723388-11723420)
chr2 (204-236)||(16708920-16708952)
chr2 (205-237)||(20892816-20892848)
chr2 (201-237)||(29419307-29419343)
chr2 (205-237)||(31765230-31765262)
chr2 (205-237)||(35428837-35428869)
chr2 (205-237)||(38556060-38556092)
chr2 (204-236)||(39670176-39670208)
[»] scaffold0115 (2 HSPs)
scaffold0115 (202-237)||(43102-43137)
scaffold0115 (203-237)||(42848-42882)
[»] scaffold0050 (1 HSPs)
scaffold0050 (206-237)||(64889-64920)
[»] scaffold0032 (2 HSPs)
scaffold0032 (203-237)||(37866-37900)
scaffold0032 (204-237)||(37613-37646)
[»] scaffold0009 (2 HSPs)
scaffold0009 (203-237)||(262886-262920)
scaffold0009 (204-237)||(262633-262666)
[»] scaffold0001 (1 HSPs)
scaffold0001 (204-237)||(180427-180460)
[»] scaffold0003 (1 HSPs)
scaffold0003 (201-237)||(114095-114131)


Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 32974578 - 32974813
Alignment:
Q  1 aacgaattttttaatgacaaatatttgtgtcatatatgatttttataataaatcatatttagtgtaatataatatacttgtcttcatgagctcagctgag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32974578 aacgaattttttaatgacaaatatttgtgtcatatatgatttttataataaatcatatttagtgtaatataatataattgtcttcatgagctcagctgag 32974677  T
Q  101 ttagtagggataatatatagggttcgaactcttgacacctcatttattcacaattaaaatatgcaagcttcagccactagactgccttgacnnnnnnnnt 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||        |    
T  32974678 ttagtagggataatatatagggttcgaactcttgacagctcatttattcacaattaaaatatgcaagcttcaaccactagactaccttgac-aaaaaaat 32974776  T
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  32974777 aatagggttaattaagtttttagtccctataaatatt 32974813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 10579025 - 10579062
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||| |||||||||||    
T  10579025 taatagggttaattaagtttttagtccctataaatatt 10579062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 15287163 - 15287200
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||| |||||||||||    
T  15287163 taatagggttaattaagtttttagtccctataaatatt 15287200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 15467532 - 15467569
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||| |||||||||||    
T  15467532 taatagggttaattaagtttttagtccctataaatatt 15467569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 32974325 - 32974293
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||    
T  32974325 gggttaattaagtttttagtctctataaatatt 32974293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 13155414 - 13155449
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  13155414 atagggttaattaagtttttagtccctataaatatt 13155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 28237574 - 28237539
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  28237574 atagggttaattaagtttttagtccctataaatatt 28237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 8082795 - 8082761
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  8082795 tagggttaattaagtttttagtccctataaatatt 8082761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 10675358 - 10675392
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  10675358 tagggttaattaagtttttagtccctataaatatt 10675392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 13155703 - 13155669
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  13155703 tagggttaattaagtttttagtccctataaatatt 13155669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 34872721 - 34872687
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  34872721 tagggttaattaagtttttagtccctataaatatt 34872687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 42129137 - 42129171
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  42129137 tagggttaattaagtttttagtccctataaatatt 42129171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 6472078 - 6472111
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  6472078 agggttaattaagtttttagtccctataaatatt 6472111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 10167504 - 10167537
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  10167504 agggttaattaagtttttagtccctataaatatt 10167537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 15104822 - 15104855
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  15104822 agggttaattaagtttttagtccctataaatatt 15104855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 15287454 - 15287421
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||||||| ||||||||||    
T  15287454 tagggttaattaagtttttagtccctataaatat 15287421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 15467823 - 15467790
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||||||| ||||||||||    
T  15467823 tagggttaattaagtttttagtccctataaatat 15467790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 16355839 - 16355872
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  16355839 agggttaattaagtttttagtccctataaatatt 16355872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 32374774 - 32374807
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  32374774 agggttaattaagtttttagtccctataaatatt 32374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 32379198 - 32379231
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  32379198 agggttaattaagtttttagtccctataaatatt 32379231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 32433153 - 32433186
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  32433153 agggttaattaagtttttagtccctataaatatt 32433186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 34058536 - 34058569
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||| ||||||||||||||    
T  34058536 tagggttaattaagttttttgtctctataaatat 34058569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 36683400 - 36683367
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  36683400 agggttaattaagtttttagtccctataaatatt 36683367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 41738688 - 41738721
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  41738688 agggttaattaagtttttagtccctataaatatt 41738721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 43165834 - 43165801
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  43165834 agggttaattaagtttttagtccctataaatatt 43165801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 43641575 - 43641608
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  43641575 agggttaattaagtttttagtccctataaatatt 43641608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 2060752 - 2060784
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  2060752 agggttaattaagtttttagtccctataaatat 2060784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 4136844 - 4136876
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||| ||||||||||||||    
T  4136844 agggttaattaagtttttggtctctataaatat 4136876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 7057473 - 7057441
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  7057473 gggttaattaagtttttagtccctataaatatt 7057441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 7288004 - 7288036
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  7288004 gggttaattaagtttttagtccctataaatatt 7288036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 10167789 - 10167757
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  10167789 gggttaattaagtttttagtccctataaatatt 10167757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 10579314 - 10579282
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  10579314 gggttaattaagtttttagtccctataaatatt 10579282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 11140937 - 11140905
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  11140937 gggttaattaagtttttagtccctataaatatt 11140905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 12616258 - 12616290
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||| ||||||||||||||    
T  12616258 agggttaattaagtttttggtctctataaatat 12616290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 15105106 - 15105074
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  15105106 gggttaattaagtttttagtccctataaatatt 15105074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 16728567 - 16728603
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  16728567 taatagggttaattaagtttttggtccctataaatat 16728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 22849261 - 22849293
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  22849261 agggttaattaagtttttagtccctataaatat 22849293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 28640263 - 28640231
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  28640263 gggttaattaagtttttagtccctataaatatt 28640231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 30610909 - 30610941
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||| ||||||||||||||    
T  30610909 agggttaattaagtttttggtctctataaatat 30610941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 32098584 - 32098616
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||| ||||||||||||||    
T  32098584 agggttaattaagtttttggtctctataaatat 32098616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 37943158 - 37943190
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  37943158 agggttaattaagtttttagtccctataaatat 37943190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 39328981 - 39329013
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  39328981 gggttaattaagtttttagtccctataaatatt 39329013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 39329238 - 39329270
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  39329238 gggttaattaagtttttagtccctataaatatt 39329270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 25703705 - 25703741
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  25703705 aatagggttaattaagtttttagtctctataaatatt 25703741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 33757395 - 33757430
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  33757395 atagggttaattaagtttttagtctctataaatatt 33757430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 20221850 - 20221883
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||||    
T  20221850 agggttaattaagtttttagtctctataaatatt 20221883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 31270848 - 31270880
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||    
T  31270848 gggttaattaagtttttagtctctataaatatt 31270880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 35119305 - 35119340
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  35119305 atagggttaattaagtttttagtccctataaatatt 35119340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 2008673 - 2008707
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  2008673 tagggttaattaagtttttagtccctataaatatt 2008707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 17604968 - 17605002
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  17604968 tagggttaattaagtttttagtccctataaatatt 17605002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 36711099 - 36711065
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  36711099 tagggttaattaagtttttagtccctataaatatt 36711065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 40593896 - 40593862
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  40593896 tagggttaattaagtttttagtccctataaatatt 40593862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 42928689 - 42928655
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  42928689 tagggttaattaagtttttagtccctataaatatt 42928655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 55453899 - 55453865
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  55453899 tagggttaattaagtttttagtccctataaatatt 55453865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 11691871 - 11691838
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  11691871 agggttaattaagtttttagtccctataaatatt 11691838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 11935774 - 11935807
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  11935774 agggttaattaagtttttagtccctataaatatt 11935807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 11936060 - 11936027
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  11936060 agggttaattaagtttttagtccctataaatatt 11936027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 19878717 - 19878684
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||| ||||||||||||||    
T  19878717 tagggttaattaagtttttcgtctctataaatat 19878684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 20222136 - 20222103
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  20222136 agggttaattaagtttttagtccctataaatatt 20222103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 24681975 - 24682012
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatatt 237  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  24681975 taatggggttaattaagtttttagtccctataaatatt 24682012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 45394445 - 45394412
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| ||||||||||||    
T  45394445 agggttaattaagtttttagtttctataaatatt 45394412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 1486722 - 1486758
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  1486722 taatagggttaattaagtttttggtccctataaatat 1486758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 4736101 - 4736069
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||| ||||||||||||||    
T  4736101 agggttaattaagtttttggtctctataaatat 4736069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 8338807 - 8338843
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  8338807 taatagggttaattaagtttttggtccctataaatat 8338843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 9557563 - 9557595
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  9557563 gggttaattaagtttttagtccctataaatatt 9557595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 16787816 - 16787784
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  16787816 agggttaattaagtttttagtccctataaatat 16787784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 25577855 - 25577891
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  25577855 taatagggttaattaagtttttggtccctataaatat 25577891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 29359029 - 29359061
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  29359029 gggttaattaagtttttagtccctataaatatt 29359061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 29843637 - 29843669
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  29843637 gggttaattaagtttttagtccctataaatatt 29843669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 33479469 - 33479437
Alignment:
Q  202 atagggttaattaagtttttagtctctataaat 234  Q
    |||||||||||||||||||||||| ||||||||    
T  33479469 atagggttaattaagtttttagtccctataaat 33479437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 36772836 - 36772804
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  36772836 gggttaattaagtttttagtccctataaatatt 36772804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 44035874 - 44035842
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  44035874 gggttaattaagtttttagtccctataaatatt 44035842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 50001385 - 50001353
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  50001385 gggttaattaagtttttagtccctataaatatt 50001353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 53327963 - 53327995
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  53327963 agggttaattaagtttttagtccctataaatat 53327995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 51345448 - 51345483
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  51345448 atagggttaattaagtttttagtctctataaatatt 51345483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 5562923 - 5562890
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||||    
T  5562923 agggttaattaagtttttagtctctataaatatt 5562890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 33253939 - 33253972
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||||    
T  33253939 agggttaattaagtttttagtctctataaatatt 33253972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 33274111 - 33274144
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||||    
T  33274111 agggttaattaagtttttagtctctataaatatt 33274144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 30925428 - 30925464
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  30925428 aatagggttaattaagtttttagtccctataaatatt 30925464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 33566791 - 33566823
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||    
T  33566791 gggttaattaagtttttagtctctataaatatt 33566823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 35937670 - 35937706
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35937670 aatagggttaattaagtttttagtccctataaatatt 35937706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 43741406 - 43741374
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||    
T  43741406 gggttaattaagtttttagtctctataaatatt 43741374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 237
Target Start/End: Complemental strand, 26922444 - 26922413
Alignment:
Q  206 ggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||    
T  26922444 ggttaattaagtttttagtctctataaatatt 26922413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 236
Target Start/End: Complemental strand, 28750335 - 28750304
Alignment:
Q  205 gggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||||||||||||||||    
T  28750335 gggttaattaagtttttagtctctataaatat 28750304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 52752197 - 52752232
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  52752197 atagggttaattaagtttttagtccctataaatatt 52752232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 6057387 - 6057353
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  6057387 tagggttaattaagtttttagtccctataaatatt 6057353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 21654099 - 21654065
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||| ||||||||||||||||||||||||||    
T  21654099 tagggttagttaagtttttagtctctataaatatt 21654065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 51345705 - 51345671
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  51345705 tagggttaattaagtttttagtccctataaatatt 51345671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 51353377 - 51353343
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  51353377 tagggttaattaagtttttagtccctataaatatt 51353343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 52710649 - 52710683
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||||| ||||||||||    
T  52710649 atagggttaattaagtttttagtccctataaatat 52710683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 3617132 - 3617165
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  3617132 agggttaattaagtttttagtccctataaatatt 3617165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 5333771 - 5333738
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||| ||||||||||||||    
T  5333771 agggttaattaagtttttaatctctataaatatt 5333738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 7065257 - 7065224
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  7065257 agggttaattaagtttttagtccctataaatatt 7065224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 14421781 - 14421748
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  14421781 agggttaattaagtttttagtccctataaatatt 14421748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 26922160 - 26922193
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  26922160 agggttaattaagtttttagtccctataaatatt 26922193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 43684698 - 43684731
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  43684698 agggttaattaagtttttagtccctataaatatt 43684731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 236
Target Start/End: Complemental strand, 48610169 - 48610140
Alignment:
Q  207 gttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||||||||||||||    
T  48610169 gttaattaagtttttagtctctataaatat 48610140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 48795473 - 48795436
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  48795473 taatatggttaattaagtttttagtccctataaatatt 48795436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 52752485 - 52752452
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  52752485 agggttaattaagtttttagtccctataaatatt 52752452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 2207046 - 2207082
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  2207046 taatagggttaattaagtttttggtccctataaatat 2207082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 10066156 - 10066188
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  10066156 gggttaattaagtttttagtccctataaatatt 10066188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 11419719 - 11419751
Alignment:
Q  203 tagggttaattaagtttttagtctctataaata 235  Q
    ||||||||||||||||||||||| |||||||||    
T  11419719 tagggttaattaagtttttagtccctataaata 11419751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 14673888 - 14673856
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  14673888 agggttaattaagtttttagtccctataaatat 14673856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 19684352 - 19684320
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  19684352 agggttaattaagtttttagtccctataaatat 19684320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 40723818 - 40723786
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  40723818 agggttaattaagtttttagtccctataaatat 40723786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 46136927 - 46136895
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  46136927 gggttaattaagtttttagtccctataaatatt 46136895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 46185082 - 46185046
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  46185082 aatagggttaattaagtttttggtccctataaatatt 46185046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 51053513 - 51053545
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  51053513 gggttaattaagtttttagtccctataaatatt 51053545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000008; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 32519088 - 32519054
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||||    
T  32519088 tagggttaattaagtttttagtctctataaatatt 32519054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 14311418 - 14311381
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||| |||||||||||    
T  14311418 taatagggttaattaagtttttagtccctataaatatt 14311381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 7201158 - 7201122
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  7201158 aatagggttaattaagtttttagtccctataaatatt 7201122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 27279747 - 27279783
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  27279747 aatagggttaattaagtttttagtccctataaatatt 27279783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 38265337 - 38265369
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||    
T  38265337 gggttaattaagtttttagtctctataaatatt 38265369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 39084702 - 39084666
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  39084702 aatagggttaattaagtttttagtccctataaatatt 39084666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 7200868 - 7200903
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  7200868 atagggttaattaagtttttagtccctataaatatt 7200903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 39084411 - 39084446
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  39084411 atagggttaattaagtttttagtccctataaatatt 39084446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 1950185 - 1950151
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  1950185 tagggttaattaagtttttagtccctataaatatt 1950151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 3850274 - 3850240
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  3850274 tagggttaattaagtttttagtccctataaatatt 3850240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 9129748 - 9129782
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  9129748 tagggttaattaagtttttagtccctataaatatt 9129782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 10862467 - 10862433
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  10862467 tagggttaattaagtttttagtccctataaatatt 10862433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 18279319 - 18279353
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  18279319 tagggttaattaagtttttagtccctataaatatt 18279353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 30187720 - 30187754
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  30187720 tagggttaattaagtttttagtccctataaatatt 30187754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 37109619 - 37109585
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  37109619 tagggttaattaagtttttagtccctataaatatt 37109585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 41621373 - 41621407
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  41621373 tagggttaattaagtttttagtccctataaatatt 41621407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 42396797 - 42396831
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  42396797 tagggttaattaagtttttagtccctataaatatt 42396831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 7401449 - 7401416
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  7401449 agggttaattaagtttttagtccctataaatatt 7401416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 7949193 - 7949160
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  7949193 agggttaattaagtttttagtccctataaatatt 7949160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 8315013 - 8315046
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||| ||||||||||||||    
T  8315013 tagggttaattaagtttttggtctctataaatat 8315046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 10862180 - 10862213
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  10862180 agggttaattaagtttttagtccctataaatatt 10862213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 12256461 - 12256428
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  12256461 agggttaattaagtttttagtccctataaatatt 12256428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 14347324 - 14347291
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  14347324 agggttaattaagtttttagtccctataaatatt 14347291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 18279124 - 18279091
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  18279124 agggttaattaagtttttagtccctataaatatt 18279091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 18279606 - 18279573
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  18279606 agggttaattaagtttttagtccctataaatatt 18279573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 19617909 - 19617942
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  19617909 agggttaattaagtttttagtccctataaatatt 19617942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 21052302 - 21052335
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  21052302 agggttaattaagtttttagtccctataaatatt 21052335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 24334668 - 24334635
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||| ||||||||||||||    
T  24334668 tagggttaattaagtttttggtctctataaatat 24334635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 28770573 - 28770606
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  28770573 agggttaattaagtttttagtccctataaatatt 28770606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 29785611 - 29785644
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  29785611 agggttaattaagtttttagtccctataaatatt 29785644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 30239230 - 30239263
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  30239230 agggttaattaagtttttagtccctataaatatt 30239263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 32905930 - 32905897
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  32905930 agggttaattaagtttttagtccctataaatatt 32905897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 33866822 - 33866789
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  33866822 agggttaattaagtttttagtccctataaatatt 33866789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 39985968 - 39986001
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  39985968 agggttaattaagtttttagtccctataaatatt 39986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 857718 - 857686
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  857718 gggttaattaagtttttagtccctataaatatt 857686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 7948949 - 7948985
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||  |||||||||||    
T  7948949 aatagggttaattaagtttttagtgcctataaatatt 7948985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 8979784 - 8979816
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  8979784 agggttaattaagtttttagtccctataaatat 8979816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 14311129 - 14311161
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  14311129 gggttaattaagtttttagtccctataaatatt 14311161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 17640170 - 17640138
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  17640170 agggttaattaagtttttagtccctataaatat 17640138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 18278839 - 18278871
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  18278839 gggttaattaagtttttagtccctataaatatt 18278871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 19089250 - 19089286
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    |||| |||||||||||||||||||| |||||||||||    
T  19089250 aataaggttaattaagtttttagtccctataaatatt 19089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 25353535 - 25353567
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  25353535 gggttaattaagtttttagtccctataaatatt 25353567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 27280004 - 27279972
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  27280004 gggttaattaagtttttagtccctataaatatt 27279972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 28770857 - 28770825
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  28770857 gggttaattaagtttttagtccctataaatatt 28770825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 8238633 - 8238666
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||||    
T  8238633 agggttaattaagtttttagtctctataaatatt 8238666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 19578997 - 19579033
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  19578997 aatagggttaattaagtttttagtccctataaatatt 19579033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 27689573 - 27689541
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||    
T  27689573 gggttaattaagtttttagtctctataaatatt 27689541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 40619675 - 40619711
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    |||| ||||||||||||||||||||||||||||||||    
T  40619675 aataaggttaattaagtttttagtctctataaatatt 40619711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 5029535 - 5029500
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||||||||| ||||||||||    
T  5029535 aatagggttaattaagtttttagtccctataaatat 5029500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 6669704 - 6669670
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| ||||||||||    
T  6669704 tagggttaattaagtttttagtctttataaatatt 6669670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 19579286 - 19579252
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  19579286 tagggttaattaagtttttagtccctataaatatt 19579252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 21047556 - 21047590
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  21047556 tagggttaattaagtttttagtccctataaatatt 21047590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 37143103 - 37143137
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| ||||||||||||    
T  37143103 tagggttaattaagtttttagtttctataaatatt 37143137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 37220163 - 37220197
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  37220163 tagggttaattaagtttttagtccctataaatatt 37220197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 38730506 - 38730472
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| ||||||||||    
T  38730506 tagggttaattaagtttttagtctttataaatatt 38730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 237
Target Start/End: Original strand, 48549558 - 48549588
Alignment:
Q  207 gttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||    
T  48549558 gttaattaagtttttagtctctataaatatt 48549588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 21994058 - 21994025
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  21994058 agggttaattaagtttttagtccctataaatatt 21994025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 28731515 - 28731548
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  28731515 agggtgaattaagtttttagtctctataaatatt 28731548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 30085331 - 30085364
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  30085331 agggttaattaagtttttagtccctataaatatt 30085364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 33253865 - 33253832
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  33253865 agggttaattaagtttttagtccctataaatatt 33253832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 237
Target Start/End: Complemental strand, 37331432 - 37331403
Alignment:
Q  208 ttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||    
T  37331432 ttaattaagtttttagtctctataaatatt 37331403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 41492618 - 41492585
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  41492618 agggttaattaagtttttagtccctataaatatt 41492585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 237
Target Start/End: Complemental strand, 44158211 - 44158182
Alignment:
Q  208 ttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||    
T  44158211 ttaattaagtttttagtctctataaatatt 44158182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 44887591 - 44887558
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  44887591 agggttaattaagtttttagtccctataaatatt 44887558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 46789558 - 46789591
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  46789558 agggttaattaagtttttagtccctataaatatt 46789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 2285642 - 2285610
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  2285642 gggttaattaagtttttagtccctataaatatt 2285610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 8238918 - 8238886
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  8238918 gggttaattaagtttttagtccctataaatatt 8238886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 8761412 - 8761380
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  8761412 gggttaattaagtttttagtccctataaatatt 8761380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 23561206 - 23561170
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||  ||||||||||    
T  23561206 aatagggttaattaagtttttagtccgtataaatatt 23561170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 33772706 - 33772674
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  33772706 agggttaattaagtttttagtccctataaatat 33772674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 33801223 - 33801191
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||| ||||||||||||||    
T  33801223 agggttaattaagtttttggtctctataaatat 33801191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 39535185 - 39535153
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  39535185 gggttaattaagtttttagtccctataaatatt 39535153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 48647874 - 48647906
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  48647874 gggttaattaagtttttagtccctataaatatt 48647906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 17205274 - 17205241
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||||    
T  17205274 agggttaattaagtttttagtctctataaatatt 17205241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 19779539 - 19779575
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  19779539 aatagggttaattaagtttttagtccctataaatatt 19779575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 12757523 - 12757488
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  12757523 atagggttaattaagtttttagtccctataaatatt 12757488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 8979082 - 8979116
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  8979082 tagggttaattaagtttttagtccctataaatatt 8979116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 9242375 - 9242409
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  9242375 tagggttaattaagtttttagtccctataaatatt 9242409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 12145314 - 12145348
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  12145314 tagggttaattaagtttttagtccctataaatatt 12145348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 16539542 - 16539508
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  16539542 tagggttaattaagtttttagtccctataaatatt 16539508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 32647265 - 32647231
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  32647265 tagggttaattaagtttttagtccctataaatatt 32647231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 584585 - 584552
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  584585 agggttaattaagtttttagtccctataaatatt 584552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 1130968 - 1131001
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  1130968 agggttaattaagtttttagtccctataaatatt 1131001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 237
Target Start/End: Original strand, 14863798 - 14863827
Alignment:
Q  208 ttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||    
T  14863798 ttaattaagtttttagtctctataaatatt 14863827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 18501719 - 18501752
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  18501719 agggttaattaagtttttagtccctataaatatt 18501752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 20510342 - 20510309
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||||||| ||||||||||    
T  20510342 tagggttaattaagtttttagtccctataaatat 20510309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 22787198 - 22787231
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  22787198 agggttaattaagtttttagtccctataaatatt 22787231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 25059350 - 25059383
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  25059350 agggttaattaagtttttagtccctataaatatt 25059383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 32462118 - 32462151
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  32462118 agggttaattaagtttttagtccctataaatatt 32462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 32646978 - 32647011
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  32646978 agggttaattaagtttttagtccctataaatatt 32647011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 5385565 - 5385533
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  5385565 gggttaattaagtttttagtccctataaatatt 5385533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 6154030 - 6153998
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  6154030 gggttaattaagtttttagtccctataaatatt 6153998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 7620947 - 7620979
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  7620947 gggttaattaagtttttagtccctataaatatt 7620979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 7621231 - 7621199
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  7621231 gggttaattaagtttttagtccctataaatatt 7621199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 12757232 - 12757268
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||  ||||||||||    
T  12757232 aatagggttaattaagtttttagtccttataaatatt 12757268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 30753235 - 30753271
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  30753235 aatagggttaattaagtttttggtccctataaatatt 30753271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 31052095 - 31052127
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  31052095 gggttaattaagtttttagtccctataaatatt 31052127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 31052353 - 31052321
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  31052353 gggttaattaagtttttagtccctataaatatt 31052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 40603654 - 40603621
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||||    
T  40603654 agggttaattaagtttttagtctctataaatatt 40603621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 11997392 - 11997424
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||    
T  11997392 gggttaattaagtttttagtctctataaatatt 11997424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 49488062 - 49488026
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  49488062 aatagggttaattaagtttttagtccctataaatatt 49488026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 29520749 - 29520714
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  29520749 atagggttaattaagtttttagtccctataaatatt 29520714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 48737890 - 48737925
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||| |||||||||||||||||||||    
T  48737890 atagggttaattaaatttttagtctctataaatatt 48737925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 1842703 - 1842669
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  1842703 tagggttaattaagtttttagtccctataaatatt 1842669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 7603825 - 7603859
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  7603825 tagggttaattaagtttttagtccctataaatatt 7603859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 8412298 - 8412332
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  8412298 tagggttaattaagtttttagtccctataaatatt 8412332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 10502411 - 10502377
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  10502411 tagggttaattaagtttttagtccctataaatatt 10502377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 22519516 - 22519550
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  22519516 tagggttaattaagtttttagtccctataaatatt 22519550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 23625138 - 23625104
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||| |||||||||||||||    
T  23625138 tagggttaattaagtttttggtctctataaatatt 23625104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 46281467 - 46281501
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  46281467 tagggttaattaagtttttagtccctataaatatt 46281501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 51948072 - 51948106
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  51948072 tagggttaattaagtttttagtccctataaatatt 51948106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 3060632 - 3060599
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  3060632 agggttaattaagtttttagtccctataaatatt 3060599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 6452286 - 6452253
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  6452286 agggttaattaagtttttagtccctataaatatt 6452253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 8459343 - 8459376
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  8459343 agggttaattaagtttttagtccctataaatatt 8459376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 8562648 - 8562681
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  8562648 agggttaattaagtttttagtccctataaatatt 8562681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 8562934 - 8562901
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  8562934 agggttaattaagtttttagtccctataaatatt 8562901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 27704504 - 27704537
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  27704504 agggttaattaagtttttagtccctataaatatt 27704537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 28756971 - 28756938
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||| ||||||||||||||    
T  28756971 tagggttaattaagtttttggtctctataaatat 28756938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 44596018 - 44595985
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  44596018 agggttaattaagtttttagtcactataaatatt 44595985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 49487773 - 49487806
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  49487773 agggttaattaagtttttagtccctataaatatt 49487806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 53230666 - 53230703
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  53230666 taatagggttaattaagtttttggtccctataaatatt 53230703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 2251608 - 2251576
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  2251608 gggttaattaagtttttagtccctataaatatt 2251576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 11338938 - 11338970
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  11338938 gggttaattaagtttttagtccctataaatatt 11338970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 11339222 - 11339190
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  11339222 gggttaattaagtttttagtccctataaatatt 11339190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 13202848 - 13202880
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||| ||||||||||||||    
T  13202848 agggttaattaagtttttggtctctataaatat 13202880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 22638326 - 22638290
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| || |||||||||||    
T  22638326 aatagggttaattaagtttttaatccctataaatatt 22638290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 23256957 - 23256989
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  23256957 gggttaattaagtttttagtccctataaatatt 23256989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 23257241 - 23257209
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  23257241 gggttaattaagtttttagtccctataaatatt 23257209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 23275119 - 23275087
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  23275119 gggttaattaagtttttagtccctataaatatt 23275087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 24281318 - 24281354
Alignment:
Q  200 taatagggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  24281318 taatagggttaattaagtttttggtccctataaatat 24281354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 26441439 - 26441407
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  26441439 gggttaattaagtttttagtccctataaatatt 26441407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 27704788 - 27704756
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  27704788 gggttaattaagtttttagtccctataaatatt 27704756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 42513435 - 42513467
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||| ||||||||||||||    
T  42513435 gggttaattaagtttttattctctataaatatt 42513467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 45918597 - 45918565
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  45918597 agggttaattaagtttttagtccctataaatat 45918565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 50309693 - 50309661
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  50309693 gggttaattaagtttttagtccctataaatatt 50309661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 658 - 694
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  658 aatagggttaattaagtttttagtccctataaatatt 694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 18418 - 18450
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||    
T  18418 gggttaattaagtttttagtctctataaatatt 18450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 21968 - 22004
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  21968 aatagggttaattaagtttttagtccctataaatatt 22004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 22258 - 22224
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  22258 tagggttaattaagtttttagtccctataaatatt 22224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 5038429 - 5038393
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  5038429 aatagggttaattaagtttttagtccctataaatatt 5038393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 20892562 - 20892594
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||||||||    
T  20892562 gggttaattaagtttttagtctctataaatatt 20892594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 644751 - 644786
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  644751 atagggttaattaagtttttagtccctataaatatt 644786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 36065706 - 36065741
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  36065706 atagggttaattaagtttttagtccctataaatatt 36065741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 36387089 - 36387054
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  36387089 atagggttaattaagtttttagtccctataaatatt 36387054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 1598965 - 1598931
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  1598965 tagggttaattaagtttttagtccctataaatatt 1598931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 16707271 - 16707237
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  16707271 tagggttaattaagtttttagtccctataaatatt 16707237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 45194524 - 45194558
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  45194524 tagggttaattaagtttttagtccctataaatatt 45194558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 2112397 - 2112430
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  2112397 agggttaattaagtttttagtccctataaatatt 2112430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 4902528 - 4902495
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||| |||||    
T  4902528 agggttaattaagtttttagtctctatatatatt 4902495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 4949926 - 4949893
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||||| |||||    
T  4949926 agggttaattaagtttttagtctctatatatatt 4949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 10215138 - 10215105
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatat 236  Q
    ||||||||||||||||||| ||||||||||||||    
T  10215138 tagggttaattaagtttttggtctctataaatat 10215105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 11554265 - 11554298
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  11554265 agggttaattaagtttttagtccctataaatatt 11554298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 11554552 - 11554519
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  11554552 agggttaattaagtttttagtccctataaatatt 11554519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 18479508 - 18479541
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  18479508 agggttaattaagtttttagtccctataaatatt 18479541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 18677057 - 18677090
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  18677057 agggttaattaagtttttagtccctataaatatt 18677090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 29950572 - 29950605
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  29950572 agggttaattaagtttttagtccctataaatatt 29950605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 34423441 - 34423474
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  34423441 agggttaattaagtttttagtccctataaatatt 34423474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 36065994 - 36065961
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  36065994 agggttaattaagtttttagtccctataaatatt 36065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 45195048 - 45195015
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  45195048 agggttaattaagtttttagtccctataaatatt 45195015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 45255115 - 45255148
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  45255115 agggttaattaagtttttagtccctataaatatt 45255148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 128932 - 128900
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  128932 gggttaattaagtttttagtccctataaatatt 128900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 8846729 - 8846761
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  8846729 gggttaattaagtttttagtccctataaatatt 8846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 11723388 - 11723420
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  11723388 gggttaattaagtttttagtccctataaatatt 11723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 16708920 - 16708952
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  16708920 agggttaattaagtttttagtccctataaatat 16708952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 20892848 - 20892816
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  20892848 gggttaattaagtttttagtccctataaatatt 20892816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 29419307 - 29419343
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||||  ||||||||||    
T  29419307 aatagggttaattaagtttttagtccttataaatatt 29419343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 31765262 - 31765230
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  31765262 gggttaattaagtttttagtccctataaatatt 31765230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 35428837 - 35428869
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  35428837 gggttaattaagtttttagtccctataaatatt 35428869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 38556060 - 38556092
Alignment:
Q  205 gggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||| |||||||||||    
T  38556060 gggttaattaagtttttagtccctataaatatt 38556092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 39670176 - 39670208
Alignment:
Q  204 agggttaattaagtttttagtctctataaatat 236  Q
    |||||||||||||||||||||| ||||||||||    
T  39670176 agggttaattaagtttttagtccctataaatat 39670208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 43137 - 43102
Alignment:
Q  202 atagggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||||| |||||||||||    
T  43137 atagggttaattaagtttttagtccctataaatatt 43102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 42848 - 42882
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  42848 tagggttaattaagtttttagtccctataaatatt 42882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 237
Target Start/End: Complemental strand, 64920 - 64889
Alignment:
Q  206 ggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||||||||||||    
T  64920 ggttaattaagtttttagtctctataaatatt 64889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 37900 - 37866
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  37900 tagggttaattaagtttttagtccctataaatatt 37866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 37613 - 37646
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  37613 agggttaattaagtttttagtccctataaatatt 37646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 262920 - 262886
Alignment:
Q  203 tagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||||||||||| |||||||||||    
T  262920 tagggttaattaagtttttagtccctataaatatt 262886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 262633 - 262666
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  262633 agggttaattaagtttttagtccctataaatatt 262666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 180427 - 180460
Alignment:
Q  204 agggttaattaagtttttagtctctataaatatt 237  Q
    |||||||||||||||||||||| |||||||||||    
T  180427 agggttaattaagtttttagtccctataaatatt 180460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 114131 - 114095
Alignment:
Q  201 aatagggttaattaagtttttagtctctataaatatt 237  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  114131 aatagggttaattaactttttagtccctataaatatt 114095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University