View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19510_low_21 (Length: 394)
Name: NF19510_low_21
Description: NF19510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19510_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 1 - 378
Target Start/End: Complemental strand, 28071976 - 28071599
Alignment:
| Q |
1 |
ttgaaggtaacattgattagagataaggctttaaaagagtttataaagcttaaacaattgtcacttcataagtcgaattttgtagggatgagttaggcct |
100 |
Q |
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| T |
28071976 |
ttgaaggtaacattgattagagataaggctttaaaagagtttataaagcttaaacaattgtcacttcataagtcgaattttgtagggatgagttaggcct |
28071877 |
T |
|
| Q |
101 |
aaaatctaatatggtgtcaatttctacaataaatgcccaatagccttggacacgaataggtgtattggaaaaagtccaagtcccgtattggctagtgatg |
200 |
Q |
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|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
28071876 |
aaaacctaatgtggtgtcaatttctacaataaatgcccaatagccttggacacgaataggtgtattggaaaaagtccaagtccagtattggctagtgatg |
28071777 |
T |
|
| Q |
201 |
caacttaaataaagctttcgcaatcctctctttacaattcgattttatgggactaagttatacctaaaatctaagagtcgcaattatgtttagaattttg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28071776 |
caacttaaataaagctttcgcaatcctctctttacaattcgattttatgggactaagttatacctaaaatctaagagtcgcaattatgtttagaattttg |
28071677 |
T |
|
| Q |
301 |
agggtcttttcaagaatatccctcaaatcatagggttggatttagactacacccttcatgtaaaagaattttaagaat |
378 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28071676 |
agggtcttttcaagaatatccctcaaatcatagggttggatttagactacacccttcatgtaaaagaattttaagaat |
28071599 |
T |
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