View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19510_low_40 (Length: 259)

Name: NF19510_low_40
Description: NF19510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19510_low_40
NF19510_low_40
[»] chr8 (18 HSPs)
chr8 (71-258)||(16532564-16532751)
chr8 (115-259)||(30791432-30791579)
chr8 (71-259)||(21958566-21958757)
chr8 (71-259)||(27190825-27191016)
chr8 (156-258)||(14446887-14446989)
chr8 (118-259)||(9256443-9256587)
chr8 (71-259)||(24333768-24333962)
chr8 (73-249)||(32372022-32372196)
chr8 (116-257)||(10014410-10014554)
chr8 (118-259)||(13152371-13152515)
chr8 (73-249)||(32359486-32359665)
chr8 (73-249)||(32342880-32343059)
chr8 (73-249)||(32355367-32355546)
chr8 (205-259)||(28846672-28846726)
chr8 (156-244)||(40146028-40146116)
chr8 (193-247)||(34228284-34228338)
chr8 (222-259)||(10467818-10467855)
chr8 (71-100)||(34845144-34845173)
[»] scaffold0019 (1 HSPs)
scaffold0019 (71-259)||(134784-134975)
[»] chr7 (14 HSPs)
chr7 (71-259)||(26493643-26493835)
chr7 (71-259)||(27387236-27387427)
chr7 (115-259)||(38575263-38575410)
chr7 (71-259)||(19400032-19400225)
chr7 (71-259)||(9230455-9230644)
chr7 (71-259)||(45197697-45197888)
chr7 (73-246)||(14088815-14088991)
chr7 (73-246)||(14398833-14399009)
chr7 (156-258)||(23179904-23180005)
chr7 (158-258)||(8638669-8638770)
chr7 (206-259)||(43728050-43728103)
chr7 (115-246)||(25491608-25491742)
chr7 (71-217)||(9557784-9557933)
chr7 (71-217)||(25024619-25024767)
[»] chr2 (12 HSPs)
chr2 (71-259)||(33453118-33453309)
chr2 (115-258)||(19951806-19951951)
chr2 (115-259)||(35649636-35649781)
chr2 (118-257)||(12539629-12539771)
chr2 (115-259)||(22483603-22483750)
chr2 (115-259)||(34526406-34526554)
chr2 (157-259)||(22464724-22464826)
chr2 (192-258)||(13308771-13308837)
chr2 (71-249)||(26656271-26656452)
chr2 (71-240)||(7886588-7886758)
chr2 (156-258)||(34317491-34317587)
chr2 (198-249)||(18426021-18426072)
[»] chr5 (13 HSPs)
chr5 (74-259)||(203904-204092)
chr5 (118-256)||(22712876-22713017)
chr5 (175-259)||(1280432-1280516)
chr5 (118-259)||(27168780-27168924)
chr5 (115-257)||(22541942-22542087)
chr5 (157-259)||(26540674-26540776)
chr5 (115-257)||(2228971-2229116)
chr5 (166-249)||(19518970-19519053)
chr5 (118-254)||(23244547-23244686)
chr5 (156-259)||(3055536-3055639)
chr5 (192-259)||(8785836-8785903)
chr5 (156-259)||(11852769-11852872)
chr5 (71-100)||(14317069-14317098)
[»] chr6 (10 HSPs)
chr6 (156-259)||(3050917-3051020)
chr6 (116-259)||(1296563-1296709)
chr6 (71-257)||(11971016-11971204)
chr6 (74-259)||(24074466-24074654)
chr6 (163-259)||(12180550-12180646)
chr6 (71-259)||(25599206-25599400)
chr6 (175-259)||(30621227-30621310)
chr6 (175-257)||(25340501-25340583)
chr6 (71-246)||(32441904-32442082)
chr6 (71-100)||(2753774-2753803)
[»] chr4 (11 HSPs)
chr4 (118-258)||(31944671-31944814)
chr4 (71-249)||(8897856-8898037)
chr4 (71-259)||(12211156-12211347)
chr4 (71-259)||(53692964-53693155)
chr4 (71-258)||(42843762-42843955)
chr4 (118-259)||(3074423-3074567)
chr4 (183-259)||(27364937-27365013)
chr4 (197-249)||(3240333-3240385)
chr4 (123-249)||(10632626-10632757)
chr4 (71-251)||(55464590-55464773)
chr4 (71-100)||(50720065-50720094)
[»] chr1 (15 HSPs)
chr1 (71-259)||(26272859-26273050)
chr1 (121-259)||(35948958-35949099)
chr1 (71-246)||(17874845-17875023)
chr1 (71-258)||(30558935-30559125)
chr1 (156-256)||(9637178-9637278)
chr1 (115-259)||(21973761-21973909)
chr1 (118-259)||(14498951-14499095)
chr1 (118-258)||(25017441-25017584)
chr1 (118-256)||(40864696-40864837)
chr1 (118-259)||(48606589-48606733)
chr1 (156-259)||(32379874-32379976)
chr1 (118-259)||(52753797-52753938)
chr1 (71-211)||(11843827-11843972)
chr1 (212-259)||(17127493-17127540)
chr1 (118-259)||(30054875-30055019)
[»] chr3 (12 HSPs)
chr3 (73-259)||(53710452-53710641)
chr3 (163-259)||(3856901-3856997)
chr3 (71-259)||(31989083-31989274)
chr3 (71-258)||(37381798-37381989)
chr3 (118-257)||(51262035-51262177)
chr3 (74-259)||(43137181-43137368)
chr3 (71-242)||(24988743-24988917)
chr3 (71-189)||(51408539-51408660)
chr3 (115-249)||(22934773-22934910)
chr3 (157-259)||(24908412-24908514)
chr3 (175-259)||(15668027-15668111)
chr3 (71-107)||(50091476-50091512)
[»] scaffold0015 (1 HSPs)
scaffold0015 (71-259)||(214091-214282)
[»] scaffold0178 (1 HSPs)
scaffold0178 (118-259)||(17794-17936)
[»] scaffold0007 (1 HSPs)
scaffold0007 (115-255)||(259976-260119)
[»] scaffold0168 (1 HSPs)
scaffold0168 (157-259)||(15868-15970)
[»] scaffold0012 (1 HSPs)
scaffold0012 (157-259)||(197159-197261)
[»] scaffold0002 (1 HSPs)
scaffold0002 (119-257)||(435326-435469)
[»] scaffold0726 (1 HSPs)
scaffold0726 (118-242)||(954-1081)
[»] scaffold0198 (1 HSPs)
scaffold0198 (164-259)||(1450-1545)
[»] scaffold0170 (1 HSPs)
scaffold0170 (71-149)||(9241-9321)


Alignment Details
Target: chr8 (Bit Score: 119; Significance: 7e-61; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 71 - 258
Target Start/End: Original strand, 16532564 - 16532751
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagagatgaaatatgaccagcaatagcgtgctaaa 170  Q
    ||||| ||||||||||||||||||||||||| ||||        ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16532564 ataaacagtcataaatcaaaataaaaaaggttcgtcgtttttttaacaaaaatacaatttgaaataagagatgaaatataaccagcaatagcgtgctaaa 16532663  T
Q  171 ttatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctc 258  Q
    | | |||||| ||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16532664 taaaattaggaggtaaatgccctttccgatatctctttgcggtgaatgtttgaataatatcaacatcatcaagtgacttgaatatctc 16532751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 30791432 - 30791579
Alignment:
Q  115 aacaaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcg 211  Q
    ||||||| ||||||||||| |||||||  |||||||| ||| | |||||||||||||||| | |||||| ||||||||  |||||||||| |||||||||    
T  30791432 aacaaaattacaatttgaattaagagagatgaaatataacctgtcaatagcgtgctaaataaaattaggtggtaaatgccctttccgagacctctttgcg 30791531  T
Q  212 gtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||| || ||||||||||||  ||||||||||||||||||||||||    
T  30791532 gtgaatgttcgaataatatcaatgtcatcaagtgacttgaatatctcc 30791579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 259
Target Start/End: Complemental strand, 21958757 - 21958566
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataaga--gatgaaatatgaccagc-aatagcgtgct 167  Q
    ||||||||||||||||| |||||||| |||| | |||       |||||||||||||||| ||||||||  |||||||||| ||| || |||||||||||    
T  21958757 ataaatagtcataaatcgaaataaaagaggttcttcattttttcaacaaaagtacaattttaaataagaaagatgaaatataacctgccaatagcgtgct 21958658  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | |||||| |||||||   ||||||| || ||||||   || ||| || ||||||||||||||||||||||||||| ||||||||||    
T  21958657 aaataaaattaggaggtaaattccctttccgcgacctcttttgagttaatgttcgaataatatcaacatcatcaagtgactcgaatatctcc 21958566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 259
Target Start/End: Complemental strand, 27191016 - 27190825
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccagc-aatagcgtgct 167  Q
    |||||||||||||||| ||||||||||| |  ||| |       | ||||| |||||||||||||||||||  ||||| || ||  || ||||| || ||    
T  27191016 ataaatagtcataaattaaaataaaaaatgctcgttattttgttagcaaaaatacaatttgaaataagagagatgaaacataacttgccaatagtgtact 27190917  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | |||||| ||||||||| ||||| ||||  ||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  27190916 aaataaaattaggaggtaaatgtcctttctgagacatctttgcggtgaatattcgagtaatatcaacatcatcaagtgacttgaatatctcc 27190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 14446989 - 14446887
Alignment:
Q  156 caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatat 255  Q
    |||||| ||||||||| | |||||| ||| ||||| |||||||||| |||||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  14446989 caatagtgtgctaaataaaattaggaggtgaatgtcctttccgagacctctttgcagtgaatgttagaataatatcaacatcatcaagtgacttgaatat 14446890  T
Q  256 ctc 258  Q
    |||    
T  14446889 ctc 14446887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 259
Target Start/End: Complemental strand, 9256587 - 9256443
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||||||||||||||  ||||| || ||  | |||||| ||||||||| | |||||| |||||||||  ||| ||||| ||||||||| ||    
T  9256587 aaaagtacaatttgaaataagagagatgaaacataacttgtcaatagtgtgctaaataaaattaggaggtaaatgtcatttgcgagacctctttgcgatg 9256488  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||| || |||| |||||||||||||||||||||||||||||||||    
T  9256487 aatgttcgaattatatcaacatcatcaagtgacttgaatatctcc 9256443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 259
Target Start/End: Complemental strand, 24333962 - 24333768
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgct 167  Q
    ||||||||||||||||| |||||||| |||  | |||       |||||||||||||||||||||||||||  ||||| || ||| | |||||| |||||    
T  24333962 ataaatagtcataaatcgaaataaaataggcacatcaatttgtcaacaaaagtacaatttgaaataagagagatgaaacataaccggtcaatagtgtgct 24333863  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaata---tttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | || | | |||||||  ||||||||||| ||||||| ||||||||   || ||||||||| ||||||||||||||||||||||||||||    
T  24333862 aaataaaatcatgaggtaaattctctttccgagacctctttgtggtgaataatgttcgaataatattaacatcatcaagtgacttgaatatctcc 24333768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 32372196 - 32372022
Alignment:
Q  73 aaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagagatgaaatatgacc-agcaatagcgtgctaaat 171  Q
    ||||||||||||||| ||||| || ||||  ||||       ||||||| |||||||||||||||||||   ||||| ||| | |||||| |||||||||    
T  32372196 aaatagtcataaatcgaaatataagaggtatgtcattttgtcaacaaaactacaatttgaaataagaga---aatataacctaccaatagtgtgctaaat 32372100  T
Q  172 tatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgactt 249  Q
     | |||||| ||||||||  ||||  |||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  32372099 aaaattaggaggtaaatgacctttttgagacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgactt 32372022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 10014410 - 10014554
Alignment:
Q  116 acaaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcgg 212  Q
    ||||||||||| ||||||||||||||  |||||||| |   | |||||  ||||||||| | |||||| ||||||||  |||||| | |||||||| |||    
T  10014410 acaaaagtacagtttgaaataagagagatgaaatataatatgtcaataatgtgctaaataaaattaggaggtaaatgccctttccaaaatctctttccgg 10014509  T
Q  213 tgaatatttgaataatatcaacatcatcaagtgacttgaatatct 257  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||    
T  10014510 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatct 10014554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 13152371 - 13152515
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    |||| |||||||||||||||||||  ||||| || ||  | |||||| ||||||||| | |||||| ||||||||  |||||||||| ||||||||| ||    
T  13152371 aaaactacaatttgaaataagagagatgaaacataacttgtcaatagtgtgctaaataaaattaggaggtaaatgccctttccgagacctctttgcgatg 13152470  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||| || |||||||| |||||||||||| ||||||||||||||||    
T  13152471 aatgttggaataataccaacatcatcaaatgacttgaatatctcc 13152515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 32359665 - 32359486
Alignment:
Q  73 aaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgacc-agcaatagcgtgctaa 169  Q
    ||||||||||||||| |||||||| ||||  | ||       ||||||| |||||||||||||||||||  |||||||| | | | |||||| |||||||    
T  32359665 aaatagtcataaatcgaaataaaagaggtatgccattttgtcaacaaaactacaatttgaaataagagagatgaaatataatctaccaatagtgtgctaa 32359566  T
Q  170 attatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgactt 249  Q
    || | |||||| ||||||||   |||  |||| |||||||| |||||| || ||||||||||||||||||||||||||||    
T  32359565 ataaaattaggaggtaaatgacatttttgagacctctttgcagtgaatgttcgaataatatcaacatcatcaagtgactt 32359486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 32343059 - 32342880
Alignment:
Q  73 aaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgacc-agcaatagcgtgctaa 169  Q
    ||||||||||||||| |||||||| ||||  | ||       ||||||| |||||||||||||||||||  |||||||| ||  | |||| | |||||||    
T  32343059 aaatagtcataaatcgaaataaaagaggtatgccattttgtcaacaaaactacaatttgaaataagagagatgaaatataacataccaatggtgtgctaa 32342960  T
Q  170 attatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgactt 249  Q
    || | |||||| ||||||||  ||||  |||| || ||||| |||||| || ||||||||||||||||||||||||||||    
T  32342959 ataaaattaggaggtaaatgacctttttgagacctttttgcagtgaatgttcgaataatatcaacatcatcaagtgactt 32342880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 32355546 - 32355367
Alignment:
Q  73 aaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgacc-agcaatagcgtgctaa 169  Q
    ||||||||||||||| |||||||| ||||  | ||       ||||||| |||||||||||||||||||  |||||||| ||  | |||| | |||||||    
T  32355546 aaatagtcataaatcgaaataaaagaggtatgccattttgtcaacaaaactacaatttgaaataagagagatgaaatataacataccaatggtgtgctaa 32355447  T
Q  170 attatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgactt 249  Q
    || | |||||| ||||||||  ||||  |||| || ||||| |||||| || ||||||||||||||||||||||||||||    
T  32355446 ataaaattaggaggtaaatgacctttttgagacctttttgcagtgaatgttcgaataatatcaacatcatcaagtgactt 32355367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 28846726 - 28846672
Alignment:
Q  205 ctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  28846726 ctttgcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 28846672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 40146028 - 40146116
Alignment:
Q  156 caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagt 244  Q
    |||||| ||||||||| | |||||| |||| |||   ||||||||| |||||||  |||||| || |||||||||||||||||||||||    
T  40146028 caatagtgtgctaaataaaattaggaggtagatgccatttccgagacctctttgttgtgaatgttcgaataatatcaacatcatcaagt 40146116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 34228284 - 34228338
Alignment:
Q  193 tttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgac 247  Q
    ||||| ||| ||||||| ||| ||| || ||||||||||||||||||||||||||    
T  34228284 tttccaagacctctttgtggtaaatgttcgaataatatcaacatcatcaagtgac 34228338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 10467855 - 10467818
Alignment:
Q  222 gaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  10467855 gaataatatcaacatcatcaaatgacttgattatctcc 10467818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 100
Target Start/End: Complemental strand, 34845173 - 34845144
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaagg 100  Q
    ||||||||||||||||||||||||||||||    
T  34845173 ataaatagtcataaatcaaaataaaaaagg 34845144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 134784 - 134975
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgacc-agcaatagcgtgct 167  Q
    ||||||||||||| |||||||||||| |||  |||||        ||||||||||| ||||||||||||||  |||||||| ||| | ||||||||||||    
T  134784 ataaatagtcatatatcaaaataaaagaggatcgtcattttttctacaaaagtacagtttgaaataagagagatgaaatataacctatcaatagcgtgct 134883  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | |||||| ||||||||  |||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  134884 aaataaaattaggaggtaaatgccctttccgagacctctttccggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 134975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 8e-36; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 26493643 - 26493835
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaa-tttgaaataagaga--tgaaatatgaccag-caatagcgtgc 166  Q
    ||||||||||||| |||||||||||| |||  |||||        |||||||||||  ||||||||||||||  |||||||| ||| | |||||||||||    
T  26493643 ataaatagtcatatatcaaaataaaagaggatcgtcattttttctacaaaagtacaggtttgaaataagagagatgaaatataacctgtcaatagcgtgc 26493742  T
Q  167 taaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||||| | |||||| ||||||||  |||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  26493743 taaataaaattaggaggtaaatgccctttccgagacctctttacggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 26493835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 27387236 - 27387427
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataaga--gatgaaatatgaccag-caatagcgtgct 167  Q
    ||||||||||||||||| ||||| || |||| |||||       ||||||||||||| || ||||||||  |||||||||| ||| | ||||||||||||    
T  27387236 ataaatagtcataaatcgaaatagaagaggttcgtcattttttcaacaaaagtacaacttaaaataagaaagatgaaatataacctgtcaatagcgtgct 27387335  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | |||||| |||||||| |||||||| || ||||||   |||||| || ||||||||||||||||||||||||||||||||||||||    
T  27387336 aaataaaattaggaggtaaatgctctttccgcgacctctttcgagtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 27387427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 38575263 - 38575410
Alignment:
Q  115 aacaaaagtacaatttgaaataaga--gatgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcg 211  Q
    ||||||||||||| || ||||||||  |||||||||| ||| | |||||||||||||||| | |||||| ||||||||||||||||| || ||||||       
T  38575263 aacaaaagtacaacttaaaataagaaagatgaaatataacctgtcaatagcgtgctaaataaaattaggaggtaaatgttctttccgcgacctctttcga 38575362  T
Q  212 gtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||    
T  38575363 gtgaatgttcgaataatatcaacatcatcaagtgactttaatatctcc 38575410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 71 - 259
Target Start/End: Complemental strand, 19400225 - 19400032
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnn--aacaaaagtacaatttgaaataaga--gatgaaatatgaccagc-aatagcgtg 165  Q
    |||||||||||||||||||||||||| |||| |||||         |||||||||||||||| ||||||||  |||||||||| ||| || |||||||||    
T  19400225 ataaatagtcataaatcaaaataaaagaggttcgtcatttttttttaacaaaagtacaattttaaataagaaagatgaaatataacctgccaatagcgtg 19400126  T
Q  166 ctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||| | |||||| |||||||   ||||||| || ||||||   |||||| || |||||||||||||||||||||| |||||||||||||||    
T  19400125 ctaaataaaattaggaggtaaataccctttccgcgacctctttcgagtgaatgttcgaataatatcaacatcatcaagcgacttgaatatctcc 19400032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 259
Target Start/End: Complemental strand, 9230644 - 9230455
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagagatgaaatatgaccag-caatagcgtgctaa 169  Q
    |||||||||||||||||||||||||| |||  |||||        | ||||||||||||||||||||||||||||| ||  |  | |||||| |||||||    
T  9230644 ataaatagtcataaatcaaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagatgaaacataccttgtcaatagtgtgctaa 9230545  T
Q  170 attatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    || | |||||| ||||||||  |||| ||| | ||||||||| ||||| || ||||||||||||||||||||| |||||||| |||||||    
T  9230544 ataaaattaggaggtaaatgcccttttcgatacctctttgcgatgaatgttcgaataatatcaacatcatcaaatgacttgagtatctcc 9230455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 259
Target Start/End: Complemental strand, 45197888 - 45197697
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgacc-agcaatagcgtgct 167  Q
    |||||| |||||||||| |||||||| || | |||||       |||||||||||||||||||||||||||  |||||||| ||| | |||||| |||||    
T  45197888 ataaatggtcataaatcgaaataaaagagattcgtcattttttcaacaaaagtacaatttgaaataagagagatgaaatataacctaccaatagggtgct 45197789  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | ||||||  |||||||  ||  |||||| ||||||| ||||||| || ||| |||||||||||| |||||||||||||||||||||    
T  45197788 aaataaaattaggatgtaaatgccctccccgagacctctttgtggtgaatgttcgaacaatatcaacatcgtcaagtgacttgaatatctcc 45197697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 246
Target Start/End: Complemental strand, 14088991 - 14088815
Alignment:
Q  73 aaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagagat--gaaatatgaccag-caatagcgtgctaa 169  Q
    |||||||||||||||||||||||| |||  |||||       ||| ||||||||||||||||||||||||  ||||||| ||  | |||||| |||||||    
T  14088991 aaatagtcataaatcaaaataaaataggctcgtcagtttgtcaaccaaagtacaatttgaaataagagatatgaaatataacttgtcaatagtgtgctaa 14088892  T
Q  170 attatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtga 246  Q
    || | |||||| ||||||||   ||||||||| ||||||||| || || |||||||||||||| |||||||||||||    
T  14088891 ataaaattaggaggtaaatgccttttccgagacctctttgcgatggatgtttgaataatatcagcatcatcaagtga 14088815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 246
Target Start/End: Complemental strand, 14399009 - 14398833
Alignment:
Q  73 aaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagagat--gaaatatgaccag-caatagcgtgctaa 169  Q
    |||||||||||||||||||||||| |||  |||||       ||| ||||||||||||||||||||||||  ||||||| ||  | |||||| |||||||    
T  14399009 aaatagtcataaatcaaaataaaataggctcgtcagtttgtcaaccaaagtacaatttgaaataagagatatgaaatataacttgtcaatagtgtgctaa 14398910  T
Q  170 attatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtga 246  Q
    || | |||||| ||||||||   ||||||||| ||||||||| || || |||||||||||||| |||||||||||||    
T  14398909 ataaaattaggaggtaaatgccttttccgagacctctttgcgatggatgtttgaataatatcagcatcatcaagtga 14398833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 23179904 - 23180005
Alignment:
Q  156 caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatat 255  Q
    |||||| ||||||||||| |||||| | ||||||  |||||| ||| ||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  23179904 caatagtgtgctaaattaaattaggag-taaatgccctttccaagacctctttgcggtgaatgttcgaataatatcaacattatcaagtgccttgaatat 23180002  T
Q  256 ctc 258  Q
    |||    
T  23180003 ctc 23180005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 8638770 - 8638669
Alignment:
Q  158 atagcgtgctaaattatattagggggtaaatgttctttccgagatc-tctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatc 256  Q
    |||| ||||||||| | |||||| ||||||||  |||||||||| | |||||||| ||||| || |||||||||| | |||||||| |||||||||||||    
T  8638770 atagtgtgctaaataaaattaggaggtaaatgccctttccgagaccctctttgcgttgaatgttcgaataatatcgatatcatcaaatgacttgaatatc 8638671  T
Q  257 tc 258  Q
    ||    
T  8638670 tc 8638669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 43728103 - 43728050
Alignment:
Q  206 tttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  43728103 tttgcgatgaatgtttgaataatatcaacatcatcaactgacttgaatatctcc 43728050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 246
Target Start/End: Original strand, 25491608 - 25491742
Alignment:
Q  115 aacaaaagtacaatttgaaataagagat--gaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcg 211  Q
    ||||||||||||||||||||||||||||  ||||||| ||  | |||||| ||| ||||| | || |||  |||||||   |||  |||| |||||| |     
T  25491608 aacaaaagtacaatttgaaataagagatatgaaatataacatgtcaatagtgtgataaataaaatcaggaagtaaatgccttttttgagacctctttaca 25491707  T
Q  212 gtgaatatttgaataatatcaacatcatcaagtga 246  Q
    |||||| || |||||||||||||||||||||||||    
T  25491708 gtgaatgttcgaataatatcaacatcatcaagtga 25491742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 9557933 - 9557784
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaata--agagatgaaatatgaccagc-aatagcgtgct 167  Q
    |||||| |||||||||||||||||||||||| |||||        | || ||||||||||||||||  ||||||||||  | |||  | ||||| |||||    
T  9557933 ataaattgtcataaatcaaaataaaaaaggttcgtcattttgtcgataagagtacaatttgaaataagagagatgaaacttaacctccgaatagtgtgct 9557834  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaat 217  Q
    |||| | |||||| |||||||   ||||| |||| |||||||||||||||    
T  9557833 aaataaaattaggaggtaaatcccctttcagagacctctttgcggtgaat 9557784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 25024767 - 25024619
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataa--gagatgaaatatgaccag-caatagcgtgct 167  Q
    ||||||| ||||||||||||||||||| ||| | |||       |||||||||||||||||||||||  |||||||||||| ||  | ||||| | ||||    
T  25024767 ataaataatcataaatcaaaataaaaagggttcatcatttgtc-aacaaaagtacaatttgaaataagagagatgaaatataacatgtcaataacatgct 25024669  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaat 217  Q
     ||| | |||||| ||||||||  ||||| |||| ||||||| |||||||    
T  25024668 taataaaattaggaggtaaatgccctttctgagacctctttgtggtgaat 25024619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 33453118 - 33453309
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagagat--gaaatatgaccagc-aatagcgtgct 167  Q
    ||||||| |||||||||||| ||||| |||| |||||       ||||||||||||||||||||||||||||  ||||||| ||  || |||||  ||||    
T  33453118 ataaataatcataaatcaaagtaaaataggttcgtcattttgtcaacaaaagtacaatttgaaataagagatatgaaatataacttgccaatagtctgct 33453217  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | |||||| |||||||| |||||| || | ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||    
T  33453218 aaataaaattaggaggtaaatgctctttctgatacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgacttaaatatctcc 33453309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 258
Target Start/End: Original strand, 19951806 - 19951951
Alignment:
Q  115 aacaaaagtacaatttgaaata-agagatgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcgg 212  Q
    |||||||||| ||||||||||| ||| ||||||||| ||| | |||||| ||||||||||| |||||  ||||||||  |||| ||||| ||||||||||    
T  19951806 aacaaaagtataatttgaaatagagatatgaaatataacctgtcaatagtgtgctaaattaaattagaaggtaaatgcccttttcgagacctctttgcgg 19951905  T
Q  213 tgaatatttgaataatatcaacatcatcaagtgacttgaatatctc 258  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  19951906 tgaatgttcgaataatatcaacatcatcaagtgacttgaatatctc 19951951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 35649636 - 35649781
Alignment:
Q  115 aacaaaagtacaatttgaaataagagatgaaatatgacc-agcaatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggt 213  Q
    ||||||||||||||||||||||||||||||||||| ||| | ||| |  || |||||| | ||||||  |||||||| |||| |||||||||||||| ||    
T  35649636 aacaaaagtacaatttgaaataagagatgaaatataacctatcaaaaatgtactaaataaaattaggaagtaaatgtccttttcgagatctctttgcagt 35649735  T
Q  214 gaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||||    
T  35649736 gaatgtttcaataatatcaacatcatcaaatgacttgaatatctcc 35649781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 12539771 - 12539629
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    |||||||||| |||||||||||||  ||||| || ||  | |||||| ||||||||| | |||||| |||||||||||||||| ||| ||||||||||||    
T  12539771 aaaagtacaaattgaaataagagagatgaaacataacgtgtcaatagtgtgctaaataaaattaggaggtaaatgttctttccaagacctctttgcggtg 12539672  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatct 257  Q
    ||| || ||||||||||||||||||||||||||||||||||||    
T  12539671 aatgttcgaataatatcaacatcatcaagtgacttgaatatct 12539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 259
Target Start/End: Complemental strand, 22483750 - 22483603
Alignment:
Q  115 aacaaaagtacaatttgaaataagaga--tgaaatatgaccagcaa-tagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcg 211  Q
    ||||||| ||||||||||| |||||||  || ||||| ||| |||| |||||||||| || | |||||| ||||||||  ||||||||||| ||||||||    
T  22483750 aacaaaattacaatttgaattaagagagatggaatattacctgcaaatagcgtgctagataaaattaggaggtaaatgccctttccgagatttctttgcg 22483651  T
Q  212 gtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||| || ||||||||||||  ||||||||||| ||||||||||||    
T  22483650 gtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcc 22483603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 259
Target Start/End: Complemental strand, 34526554 - 34526406
Alignment:
Q  115 aacaaaagtacaatttgaaataagaga--tgaaatatgaccagc--aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgc 210  Q
    ||||||| ||||||||||| |||||||  || ||||| ||| ||  |||||||||||| || | |||||| ||||||||  ||||||||||| |||||||    
T  34526554 aacaaaattacaatttgaattaagagagatggaatattacctgccaaatagcgtgctagataaaattaggaggtaaatgccctttccgagatttctttgc 34526455  T
Q  211 ggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||||||| || ||||||||||||  ||||||||||| ||||||||||||    
T  34526454 ggtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcc 34526406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 22464826 - 22464724
Alignment:
Q  157 aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatc 256  Q
    |||||||||||| || | |||||| ||||||||  |||| |||||| |||||||||||||| |||||||||||||||  ||||||||||| |||||||||    
T  22464826 aatagcgtgctagataaaattaggaggtaaatgcccttttcgagatttctttgcggtgaatgtttgaataatatcaatgtcatcaagtgatttgaatatc 22464727  T
Q  257 tcc 259  Q
    |||    
T  22464726 tcc 22464724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 13308837 - 13308771
Alignment:
Q  192 ctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctc 258  Q
    |||||||||| ||||||  ||||||| || |||||||||||||||||||||||||||||||||||||    
T  13308837 ctttccgagacctctttatggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctc 13308771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 249
Target Start/End: Original strand, 26656271 - 26656452
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccagc-aatagcgtgct 167  Q
    ||||||||||||||||| |||||||| ||||  ||||       |||||||||||||||| ||||||||||  |||||||| |||  | ||||| ||||     
T  26656271 ataaatagtcataaatcgaaataaaagaggtatgtcattttgtcaacaaaagtacaatttaaaataagagagatgaaatataacctactaatagtgtgcg 26656370  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaac-atcatcaagtgactt 249  Q
    |||| | |||||| ||||||||  ||| |  ||||||||||||||||||| || ||||||||||||| ||| |||||||||||    
T  26656371 aaataaaattaggaggtaaatgacctt-ctaagatctctttgcggtgaatgttcgaataatatcaacaatcgtcaagtgactt 26656452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 240
Target Start/End: Original strand, 7886588 - 7886758
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgac-cagcaatagcgtgct 167  Q
    ||||||| |||||||| ||||||||| ||||| ||||       |||||||||||||||||||||||||||  |||||||| ||  | |||||| |||||    
T  7886588 ataaataatcataaataaaaataaaagaggtctgtcattaaatcaacaaaagtacaatttgaaataagagaggtgaaatataacatatcaatagtgtgct 7886687  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatc 240  Q
    |||| | |||||| ||||| ||  ||||| || |  |||||||||||||| ||||||||  ||||||||||||    
T  7886688 aaataaaattaggaggtaagtgacctttctgaaacttctttgcggtgaatgtttgaata--atcaacatcatc 7886758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 34317491 - 34317587
Alignment:
Q  156 caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatat 255  Q
    |||||| ||||||| | | |||||| |||||||| |||||  |||| |||||||||||||      ||| |||||||||||||| |||||||||||||||    
T  34317491 caatagtgtgctaattaaaattaggaggtaaatgctctttttgagacctctttgcggtga------gaacaatatcaacatcatgaagtgacttgaatat 34317584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 18426021 - 18426072
Alignment:
Q  198 gagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgactt 249  Q
    |||| |||||| |||||||| || ||||||||||||||| ||||||||||||    
T  18426021 gagacctctttacggtgaatgttcgaataatatcaacattatcaagtgactt 18426072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 259
Target Start/End: Complemental strand, 204092 - 203904
Alignment:
Q  74 aatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaa 170  Q
    ||||||||||||||||||||||| ||   |||||        ||||||||||| ||||||||||||||  |||||||| |   | |||||| ||||||||    
T  204092 aatagtcataaatcaaaataaaagagaatcgtcattttttctacaaaagtacagtttgaaataagagagatgaaatataatttgtcaatagtgtgctaaa 203993  T
Q  171 ttatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    | | |||||| ||||||||| |||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  203992 taaaattaggaggtaaatgtcctttccgagacctctttccggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 203904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 22712876 - 22713017
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||||||||||||||  || || || ||  | |||||| ||||||||| | |||||| |||||||| |||||| |||| ||||||||||||    
T  22712876 aaaagtacaatttgaaataagagagatgtaacataacatgacaatagtgtgctaaataaaattaggaggtaaatgctctttctgagacctctttgcggtg 22712975  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatc 256  Q
    ||| ||||||||||||||||||||||||||||| ||||||||    
T  22712976 aatgtttgaataatatcaacatcatcaagtgacatgaatatc 22713017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 259
Target Start/End: Complemental strand, 1280516 - 1280432
Alignment:
Q  175 attagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||| ||||||||   ||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  1280516 attaggaggtaaatgccttttccgagacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 1280432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 27168780 - 27168924
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccagc-aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||| ||||||||||||||||  ||||| || |||| | ||||| ||||||||| | |||||| ||||||||  ||||  |||| ||| || |||||    
T  27168780 aaaagtataatttgaaataagagagatgaaacataaccatccaatagtgtgctaaataaaattaggaggtaaatgccctttatgagacctcatttcggtg 27168879  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||| || ||||||||||||||| ||||||||||||||||||||||    
T  27168880 aatgttcgaataatatcaacattatcaagtgacttgaatatctcc 27168924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 257
Target Start/End: Complemental strand, 22542087 - 22541942
Alignment:
Q  115 aacaaaagtacaatttgaaataagagat--gaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcg 211  Q
    |||||||||||||||||||||||||||   ||||||| ||| | |||||||||||||||| | |||| | ||||||||  ||||||| || ||||||       
T  22542087 aacaaaagtacaatttgaaataagagagaagaaatataacctgacaatagcgtgctaaataaaattatgaggtaaatgccctttccgcgacctctttcga 22541988  T
Q  212 gtgaatatttgaataatatcaacatcatcaagtgacttgaatatct 257  Q
    | |||| || ||||||||| ||||||||| ||||||||||||||||    
T  22541987 gggaatgttcgaataatattaacatcatcgagtgacttgaatatct 22541942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 26540674 - 26540776
Alignment:
Q  157 aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatc 256  Q
    |||||||||||| || | |||||| ||||||||  ||||| ||||| |||||||||||||| || ||||||||||||  ||||||||||| |||||||||    
T  26540674 aatagcgtgctagataaaattaggaggtaaatgccctttctgagatttctttgcggtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatc 26540773  T
Q  257 tcc 259  Q
    |||    
T  26540774 tcc 26540776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 257
Target Start/End: Complemental strand, 2229116 - 2228971
Alignment:
Q  115 aacaaaagtacaatttgaaataa--gagatgaaatatgacc-agcaatagcgtgctaaattatattagggggtaaatgttctttccgag-atctctttgc 210  Q
    |||||||||| ||||||||||||  |||||||||||| ||| | |||||||||||||||| | |||||| ||||||||  | |||| || | ||||||||    
T  2229116 aacaaaagtataatttgaaataagagagatgaaatataacctaccaatagcgtgctaaataaaattaggaggtaaatg-cccttcctagaacctctttgc 2229018  T
Q  211 ggtgaatatttgaataatatcaacatcatcaagtgacttgaatatct 257  Q
    | ||||| ||  |||||||||||||||||||| |||||| |||||||    
T  2229017 gatgaatgttcaaataatatcaacatcatcaaatgacttaaatatct 2228971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 19518970 - 19519053
Alignment:
Q  166 ctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgactt 249  Q
    |||||| | |||||| ||||||||  |||||| | | ||||||||||||||| || ||||||||||||||||||||||||||||    
T  19518970 ctaaataaaattaggtggtaaatgacctttccaatacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgactt 19519053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 254
Target Start/End: Original strand, 23244547 - 23244686
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||||||||||||||  |||||||| | | | |||||| ||| ||||| | |||||  |||| |||  ||||| |||| ||| |||||||     
T  23244547 aaaagtacaatttgaaataagagagatgaaatataatctgtcaatagtgtggtaaataaaattagcaggtacatgccctttctgagacctcgttgcggtt 23244646  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaata 254  Q
    ||| ||  |||||||||||||||||||||||||| |||||    
T  23244647 aatgttcaaataatatcaacatcatcaagtgactagaata 23244686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 259
Target Start/End: Complemental strand, 3055639 - 3055536
Alignment:
Q  156 caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatat 255  Q
    |||||| ||||||||| | |||||| ||||||||   |||  |||| ||| |||||  |||| || ||||||||||||||||||||| ||||||||||||    
T  3055639 caatagtgtgctaaataaaattaggaggtaaatgccatttatgagacctcattgcgcggaatgttcgaataatatcaacatcatcaaatgacttgaatat 3055540  T
Q  256 ctcc 259  Q
    ||||    
T  3055539 ctcc 3055536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 8785903 - 8785836
Alignment:
Q  192 ctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| ||||| || |||||||||||| || |||||||||||| |||||||| ||| ||||||||||||    
T  8785903 cttttcgagacctatttgcggtgaatgttcgaataatatcaatatcatcaactgaattgaatatctcc 8785836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 259
Target Start/End: Complemental strand, 11852872 - 11852769
Alignment:
Q  156 caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatat 255  Q
    |||||| ||||||||| | |||||  |||||||  ||||||  ||| ||||||| | | ||| || ||||||||||||||||||||||||| || |||||    
T  11852872 caatagtgtgctaaataaaattagaaggtaaatactctttcttagacctctttgtgttaaatgttcgaataatatcaacatcatcaagtgagttaaatat 11852773  T
Q  256 ctcc 259  Q
    ||||    
T  11852772 ctcc 11852769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 100
Target Start/End: Complemental strand, 14317098 - 14317069
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaagg 100  Q
    ||||||||||||||||||||||||||||||    
T  14317098 ataaatagtcataaatcaaaataaaaaagg 14317069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 8e-33; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 156 - 259
Target Start/End: Complemental strand, 3051020 - 3050917
Alignment:
Q  156 caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatat 255  Q
    |||||| ||||||||| | |||||| |||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3051020 caatagtgtgctaaataaaattaggtggtaaatgctctttccgagacctctttccggtgaatgtttgaataatatcaacatcatcaagtgacttgaatat 3050921  T
Q  256 ctcc 259  Q
    ||||    
T  3050920 ctcc 3050917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 259
Target Start/End: Complemental strand, 1296709 - 1296563
Alignment:
Q  116 acaaaagtacaatttgaaataaga--gatgaaatatgaccagca-atagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcgg 212  Q
    ||||||||||||||||||||||||  |||||||||| ||| ||  |||| ||| ||||| | || ||| ||||||||  |||||||||| ||||||   |    
T  1296709 acaaaagtacaatttgaaataagatagatgaaatataacctgccgatagtgtggtaaataaaataaggaggtaaatggcctttccgagacctctttattg 1296610  T
Q  213 tgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||||||||||||||| || |||||||||||||||||||||||||    
T  1296609 tgaatatttgaataatattaatatcatcaagtgacttgaatatctcc 1296563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 257
Target Start/End: Complemental strand, 11971204 - 11971016
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgct 167  Q
    ||||||||||||||||||| |||||| ||||  ||||       ||  |||||||||||||||||||||||  ||||| || ||| | |||||| |||||    
T  11971204 ataaatagtcataaatcaagataaaagaggtttgtcattttgacaattaaagtacaatttgaaataagagagatgaaacataacctgtcaatagtgtgct 11971105  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatct 257  Q
    |||| | |||||| ||||||||  ||||| |||| |||||| |||||||| || | | ||||||||||||||||||||||||||||||||    
T  11971104 aaataaaattaggaggtaaatgccctttctgagacctcttt-cggtgaatgttcgcaaaatatcaacatcatcaagtgacttgaatatct 11971016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 259
Target Start/End: Complemental strand, 24074654 - 24074466
Alignment:
Q  74 aatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaa 170  Q
    |||||| |||||||||||||||| |||  |||||        ||||||||||||||| ||||||||||  |||||||| | | | ||| | |||||||||    
T  24074654 aatagtaataaatcaaaataaaagagggtcgtcattttttctacaaaagtacaatttaaaataagagagatgaaatataatctgtcaaaaacgtgctaaa 24074555  T
Q  171 ttatattagggggtaaatgttctttccgagatctctttgcggt-gaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    | | |||||| ||||||||| | |||||||| |||||| |||| |||| || ||||||||||||||||||||||| ||||||||||||||    
T  24074554 taaaattaggaggtaaatgt-cattccgagacctctttccggttgaatgttcgaataatatcaacatcatcaagtaacttgaatatctcc 24074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 12180550 - 12180646
Alignment:
Q  163 gtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||||||||| | |||||  ||||||||  ||| |||||| ||||||||||||||| || |||||||||||||| ||||||||||||||||| |||||    
T  12180550 gtgctaaataaaattagaaggtaaatgcccttcccgagacctctttgcggtgaatgttcgaataatatcaacaacatcaagtgacttgaatttctcc 12180646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 259
Target Start/End: Complemental strand, 25599400 - 25599206
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccagc-aatagcgtgct 167  Q
    ||||||||||||||||| |||||||| |||  |||||        | ||||||||||||| ||||||||||  |||||||| ||  || ||||| ||| |    
T  25599400 ataaatagtcataaatcgaaataaaataggctcgtcattttgtcgataaaagtacaattttaaataagagagatgaaatataacttgccaatagtgtgtt 25599301  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtga---atatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | ||||||  |||||||  |||||||||| ||||||||| |||   || || |||||||||||||||||||||||||||||| |||||||    
T  25599300 aaatcaaattaggacgtaaatgccctttccgagacctctttgcgatgatgaatgttcgaataatatcaacatcatcaagtgacttgattatctcc 25599206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 259
Target Start/End: Complemental strand, 30621310 - 30621227
Alignment:
Q  175 attagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||| ||||||||| |||||||||| |||||| || ||||| || |||||||||||||||||||||||||||||| |||||||    
T  30621310 attaggaggtaaatgtcctttccgagacctcttt-cgatgaatgttcgaataatatcaacatcatcaagtgacttgattatctcc 30621227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 25340583 - 25340501
Alignment:
Q  175 attagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatct 257  Q
    |||||| ||||||||  ||||| |||| ||||||  ||||||| || |||||||||||||||||||||||||||| |||||||    
T  25340583 attaggaggtaaatgcactttctgagacctctttatggtgaatgttcgaataatatcaacatcatcaagtgacttaaatatct 25340501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 32441904 - 32442082
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccagc-aatagcgtgct 167  Q
    ||||||||||||||||| |||||||| |||  |||||        | ||||||||||||||||||||||||  | ||| || ||  || ||| | |||||    
T  32441904 ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagataaaacataacttgccaatggtgtgct 32442003  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtga 246  Q
    |||| | |||| | ||||||||  |||||||| | ||||||| | ||||| || |||||||||||||||||||||||||    
T  32442004 aaataaaattaagaggtaaatgccctttccgatacctctttgggatgaatgttcgaataatatcaacatcatcaagtga 32442082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 100
Target Start/End: Complemental strand, 2753803 - 2753774
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaagg 100  Q
    ||||||||||||||||||||||||||||||    
T  2753803 ataaatagtcataaatcaaaataaaaaagg 2753774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 118 - 258
Target Start/End: Complemental strand, 31944814 - 31944671
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||||||||||||||  ||||| || ||  | |||||| || |||||| | |||||| ||||||||  |||||||||| ||||||||||||    
T  31944814 aaaagtacaatttgaaataagagagatgaaacataacttgtcaatagtgtactaaataaaattaggaggtaaatgccctttccgagacctctttgcggtg 31944715  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatctc 258  Q
    ||| || |||||||||||||||||||||||||||||||||||||    
T  31944714 aatgttcgaataatatcaacatcatcaagtgacttgaatatctc 31944671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 249
Target Start/End: Original strand, 8897856 - 8898037
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgacc-agcaatagcgtgct 167  Q
    ||||| |||||||||||||||||||| |||| |||||       |||||||||||||||||||||||||||  |||||||| | | | ||||||  ||||    
T  8897856 ataaagagtcataaatcaaaataaaagaggttcgtcattttgtcaacaaaagtacaatttgaaataagagagatgaaatataaactaccaatagtttgct 8897955  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgactt 249  Q
    |||| | |||||| |||||||  |||||| |||| |||||||||||||||  | ||||||||||||||||||| ||||||||    
T  8897956 aaataaaattaggaggtaaatagtctttctgagacctctttgcggtgaatgctcgaataatatcaacatcatccagtgactt 8898037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 12211156 - 12211347
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgacc-agcaatagcgtgct 167  Q
    ||||||| ||||||||| ||||||||||| | |||||       |||||||||||||||||| ||||||||  |||||||| ||| | |||||| |||||    
T  12211156 ataaataatcataaatcgaaataaaaaagattcgtcattttatcaacaaaagtacaatttgagataagagagatgaaatataacctaccaatagtgtgct 12211255  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | |||||| |||||||||  ||| ||||| ||| |||   ||||| || ||||||||||||||||||||| ||||||||||||||||    
T  12211256 aaataaaattaggaggtaaatgtcattttcgagacctcattgaaatgaatgttcgaataatatcaacatcatcaaatgacttgaatatctcc 12211347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 53692964 - 53693155
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccagc-aatagcgtgct 167  Q
    ||||||||||||||||| |||||||| |||  |||||        | ||||||||||||||||||||||||  ||||| || ||  || ||||| |||||    
T  53692964 ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagatgaaacataacttgccaatagtgtgct 53693063  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | |||| | ||| ||||  |||||||||| ||||||||| ||||| || |||||||||||||||||||||||| ||||| |||||||    
T  53693064 aaatgaaattaagaggtgaatgccctttccgagacctctttgcgatgaatgttcgaataatatcaacatcatcaagtgccttgattatctcc 53693155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 71 - 258
Target Start/End: Complemental strand, 42843955 - 42843762
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataag--agatgaaatatgac-cagcaatagcgtgct 167  Q
    ||||||||||||||||| |||||||| |||| |||||       |||||||||||||||| ||| |||  ||||||||||| || || ||||| ||||||    
T  42843955 ataaatagtcataaatcgaaataaaagaggttcgtcattttttcaacaaaagtacaatttaaaacaagtgagatgaaatataactcaccaataacgtgct 42843856  T
Q  168 aaattatattagggggtaaatgttctttccgagatctc---tttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctc 258  Q
    |||| | ||||||  || ||||  ||  |||||| |||   |||| ||||||| || || ||||||||||||||||||||||||||||||||||    
T  42843855 aaataaaattaggatgtcaatgccctccccgagacctcctctttgtggtgaatgttcgattaatatcaacatcatcaagtgacttgaatatctc 42843762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 259
Target Start/End: Complemental strand, 3074567 - 3074423
Alignment:
Q  118 aaaagtacaatttgaaataa--gagatgaaatatgaccagc-aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||||||||||  ||||||||| || ||  || ||||| ||||||||| | |||||| | ||||||  ||| | |||| ||||||||| ||    
T  3074567 aaaagtacaatttgaaataaaagagatgaaacataacttgccaatagtgtgctaaataaaattaggagataaatgcccttcctgagacctctttgcgatg 3074468  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||| ||  ||||||||||||||||||||||||||||| |||||||    
T  3074467 aatgttcaaataatatcaacatcatcaagtgacttgattatctcc 3074423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 27365013 - 27364937
Alignment:
Q  183 gtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||||  |||| ||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  27365013 gtaaatgcccttttcgagacctcttttcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 27364937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 3240333 - 3240385
Alignment:
Q  197 cgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgactt 249  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  3240333 cgagatctctttgcggtgaatattcgaatattatcaacatcatcaagtaactt 3240385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 10632626 - 10632757
Alignment:
Q  123 tacaatttgaaataagaga--tgaaatatgacc-agcaatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg--aat 217  Q
    |||||||||||||||||||  |||||||| | | | |||||| |||| |||| | |||||| |||||||| | |||||||||  |||||||||||  |||    
T  10632626 tacaatttgaaataagagagatgaaatataagctaccaatagtgtgcaaaataaaattaggaggtaaatgatatttccgagacttctttgcggtgaaaat 10632725  T
Q  218 atttgaataatatcaacatcatcaagtgactt 249  Q
     || |||||| || ||||||||||||||||||    
T  10632726 gttcgaataacattaacatcatcaagtgactt 10632757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 251
Target Start/End: Original strand, 55464590 - 55464773
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataaga--gatgaaatatgaccagc-aatagcgtgct 167  Q
    |||||| ||| |||||| |||||||| |||| |||||       |||||||||| ||||||||||||||  |||||||||| ||| || |||  ||||||    
T  55464590 ataaattgtcgtaaatcgaaataaaagaggttcgtcattttttcaacaaaagtataatttgaaataagaaagatgaaatataacctgccaattacgtgct 55464689  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttga 251  Q
    |||| | |||||| |||| |||   ||| ||    ||||||   |||||| || ||||||||||||||||||||||||||||||    
T  55464690 aaataaaattaggaggtagatgcctttttcgtagcctctttcgagtgaatgttcgaataatatcaacatcatcaagtgacttga 55464773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 100
Target Start/End: Original strand, 50720065 - 50720094
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaagg 100  Q
    ||||||||||||||||||||||||||||||    
T  50720065 ataaatagtcataaatcaaaataaaaaagg 50720094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 26272859 - 26273050
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagagat--gaaatatgaccagc-aatagcgtgct 167  Q
    ||||||||||||||||| ||||||||||||| ||||        ||||||||||||||||||||||||||||  ||||||| ||  || ||||| |||||    
T  26272859 ataaatagtcataaatcgaaataaaaaaggttcgtctttttgtcaacaaaagtacaatttgaaataagagatatgaaatataacatgccaatagtgtgct 26272958  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | |||||  ||||| ||  |||||||||| || |||||| ||||| || ||||||||| |||||||||| |||||||||||||||||    
T  26272959 aaataaaattagtaggtaattgccctttccgagacctgtttgcgatgaatgttcgaataatattaacatcatcacgtgacttgaatatctcc 26273050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 259
Target Start/End: Original strand, 35948958 - 35949099
Alignment:
Q  121 agtacaatttgaaata--agagatgaaatatgacc-agcaatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaat 217  Q
    |||||| |||||||||  ||||||||||||| | | | | ||||||||| |||| | |||||| ||||||||| |||||||||| |||||| ||||||||    
T  35948958 agtacagtttgaaatacgagagatgaaatataatctatctatagcgtgcaaaataaaattaggaggtaaatgtcctttccgagacctcttttcggtgaat 35949057  T
Q  218 atttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
     || |||||| |||||||||||||||||||||||||||||||    
T  35949058 gttcgaataacatcaacatcatcaagtgacttgaatatctcc 35949099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 17875023 - 17874845
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgct 167  Q
    ||||||||||||||||| ||||| || | || |||||       |||||||||||||||| ||||||||||  |||||||| | | | |||||| ||| |    
T  17875023 ataaatagtcataaatcgaaatagaagaagttcgtcattttatcaacaaaagtacaatttaaaataagagagatgaaatataatctgtcaatagtgtggt 17874924  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtga 246  Q
    |||| | |||||  |||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||    
T  17874923 aaataaaattagaaggtaaatgatcttttcgagacctctttgcggtgaatgtttgaataatatcaacatcatccagtga 17874845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 258
Target Start/End: Original strand, 30558935 - 30559125
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgacc-agcaatagcgtgct 167  Q
    |||||||||||||||||||||||||| |||  | |||       || ||||||||||||||||||||||||  ||||| || | | | |||||| |||||    
T  30558935 ataaatagtcataaatcaaaataaaagaggctcatcattttgtcaataaaagtacaatttgaaataagagagatgaaacataatctaccaatagtgtgct 30559034  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctc 258  Q
    |||| | |||||| ||||||| |  |||  ||||||| ||| |||||||| || ||||||||||| |||||||||||||||||||||||||    
T  30559035 aaataaaattaggaggtaaatatcatttatgagatctatttacggtgaatgttcgaataatatcagcatcatcaagtgacttgaatatctc 30559125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 9637278 - 9637178
Alignment:
Q  156 caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatat 255  Q
    |||||| ||||||||| | ||||||  |||||||  |||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  9637278 caatagtgtgctaaataaaattaggatgtaaatgccctttccgagacctctttgcggtgaatgttcaaataatatcaacatcatcaagtgacttgaatat 9637179  T
Q  256 c 256  Q
    |    
T  9637178 c 9637178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 21973761 - 21973909
Alignment:
Q  115 aacaaaagtacaatttgaaataagaga--tgaaatatgaccagc--aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgc 210  Q
    ||||||| ||||||||||| |||||||  || ||||| ||| ||  |||||| ||||| || | |||||| ||||||||  ||||||||||| |||||||    
T  21973761 aacaaaattacaatttgaattaagagagatggaatattacctgccaaatagcatgctagataaaattaggaggtaaatgccctttccgagatttctttgc 21973860  T
Q  211 ggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||||||| || ||||||||||||  ||||||||||| ||||||||||||    
T  21973861 ggtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcc 21973909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 259
Target Start/End: Complemental strand, 14499095 - 14498951
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||||||||||||||  ||||| || ||  | |||||| ||  |||||   |||||| ||||||||| ||||| |||| ||||||||| ||    
T  14499095 aaaagtacaatttgaaataagagagatgaaacataacttgtcaatagtgttttaaatataattaggaggtaaatgtcctttctgagacctctttgcgatg 14498996  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||| || ||||||||||||||||||||| ||||||||||||||||    
T  14498995 aatgttcgaataatatcaacatcatcaaatgacttgaatatctcc 14498951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 258
Target Start/End: Complemental strand, 25017584 - 25017441
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    |||| |||||||||||||||||||  ||  |||| ||| | |||||| ||||||||| | |||||| |||| |||  ||||| |||| ||||||||||||    
T  25017584 aaaaatacaatttgaaataagagagatgtgatataacctgtcaatagtgtgctaaataaaattaggaggtatatgccctttctgagacctctttgcggtg 25017485  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatctc 258  Q
    ||  || ||||||||||||||||||||||||| |||||||||||    
T  25017484 aacgttcgaataatatcaacatcatcaagtgatttgaatatctc 25017441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 40864696 - 40864837
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccagc-aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||||||||||||||  || || || ||| |  ||||| ||||||||| | |||||| ||||||||  |||||  | | ||||||||||||    
T  40864696 aaaagtacaatttgaaataagagagatgtaacataacctgttaatagtgtgctaaataaaattaggaggtaaatgccctttctaaaacctctttgcggtg 40864795  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatc 256  Q
    ||| || ||||||||||||||| |||||||||||||||||||    
T  40864796 aatgttcgaataatatcaacattatcaagtgacttgaatatc 40864837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 48606589 - 48606733
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccagc-aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||||||| ||||||  ||||| || | | || ||||| ||||||||| | |||| | ||||||||  |||||  ||| ||||||||||||    
T  48606589 aaaagtacaatttgaaacaagagagatgaaacataatctgccaatagtgtgctaaataaaattatgaggtaaatgccctttcgaagacctctttgcggtg 48606688  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    | | |||||||||||||||||| ||||||| ||||||||||||||    
T  48606689 agtgtttgaataatatcaacattatcaagttacttgaatatctcc 48606733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 32379874 - 32379976
Alignment:
Q  156 caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatat 255  Q
    |||||| ||||||||| | |||||| |||||||||  ||| ||| | ||||||||| | ||| || ||||||||||||||||||||||||| ||||||||    
T  32379874 caatagtgtgctaaataaaattaggaggtaaatgtcattttcgatacctctttgcg-taaatgttcgaataatatcaacatcatcaagtgaattgaatat 32379972  T
Q  256 ctcc 259  Q
    ||||    
T  32379973 ctcc 32379976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 52753797 - 52753938
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||| ||||||||||  ||||| || ||  | |||||| |||||| || | |||||| |||||||   |||||||||| |||||||||       
T  52753797 aaaagtacaatttaaaataagagagatgaaacataacttgtcaatagtgtgctagataaaattaggaggtaaataccctttccgagacctctttgcg--- 52753893  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||| || ||||||||||||||||||||| ||||||||||||||||    
T  52753894 aatgttcgaataatatcaacatcatcaaatgacttgaatatctcc 52753938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 11843827 - 11843972
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnn--aacaaaagtacaatttgaaataag--agatgaaatatgacc-agcaatagcgtg 165  Q
    ||||||||||||||||  ||||||||||||| |||||         ||||||||||||||||||||||||  ||||||||||| ||| | |||||| |||    
T  11843827 ataaatagtcataaattgaaataaaaaaggttcgtcatttttttttaacaaaagtacaatttgaaataagatagatgaaatataacctaccaatagtgtg 11843926  T
Q  166 ctaaattatattagggggtaaatgttctttccgagatctctttgcg 211  Q
    |||||| | |||||| ||||||||| ||||| |||| || ||||||    
T  11843927 ctaaataaaattaggaggtaaatgtcctttcagagacctatttgcg 11843972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 17127540 - 17127493
Alignment:
Q  212 gtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||| || |||||||||||||||||||||| |||||||||||||||    
T  17127540 gtgaatgttcgaataatatcaacatcatcaagcgacttgaatatctcc 17127493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 259
Target Start/End: Complemental strand, 30055019 - 30054875
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||| ||||||||||  ||||| || ||  | |||||  ||||||||| | |||||| |||||||||  |||  || | |||||||||| |    
T  30055019 aaaagtacaatttaaaataagagagatgaaacataacgtgtcaataatgtgctaaataaaattaggaggtaaatgtcatttatgatacctctttgcggag 30054920  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||  || ||||||| |||| || ||||||||||||||||||||||    
T  30054919 aaggttcgaataatgtcaatatgatcaagtgacttgaatatctcc 30054875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 259
Target Start/End: Complemental strand, 53710641 - 53710452
Alignment:
Q  73 aaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataaga--gatgaaatatgaccag-caatagcgtgctaa 169  Q
    ||||||||||||||| |||||||| | || |||||       ||||||||||||| || ||||||||  ||| |||||| ||| | ||||||||||||||    
T  53710641 aaatagtcataaatcgaaataaaagaagttcgtcattttttcaacaaaagtacaacttaaaataagaaagataaaatataacctgtcaatagcgtgctaa 53710542  T
Q  170 attatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    || | |||||| ||||||||  ||||||| || ||||||   |||||| || ||||||||||||||||||||||||||||||||||||||    
T  53710541 ataaaattaggaggtaaatgccctttccgtgacctctttcgagtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 53710452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 3856901 - 3856997
Alignment:
Q  163 gtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    ||||||||| | |||||| ||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  3856901 gtgctaaataaaattaggaggtaaattttctttctgagacctctttgcggtgaatgtttgaataatatcaacatcatcaaatgacttgaatatctcc 3856997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 259
Target Start/End: Complemental strand, 31989274 - 31989083
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataaga--gatgaaatatgaccagc-aatagcgtgct 167  Q
    ||||||| ||||||||| |||||||| |||| |||||       ||||||||||||| || ||||||||  |||||||||| ||| |  ||| |||||||    
T  31989274 ataaataatcataaatcgaaataaaagaggttcgtcactttttcaacaaaagtacaacttaaaataagaaagatgaaatataacctgttaatggcgtgct 31989175  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | |||||| ||||||||  ||||||| || ||||||   |||||| || ||||||||||||||||||||||||||||||||||||||    
T  31989174 aaataaaattaggaggtaaatgccctttccgcgacctctttcgagtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 31989083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 258
Target Start/End: Original strand, 37381798 - 37381989
Alignment:
Q  71 ataaatagt-cataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagagat--gaaatatgaccag-caatagcgtgc 166  Q
    ||||||||| |||||||| |||||||| |||| |||||       ||||||||||| |||| |||||||||||  ||||||| ||| | |||||||||||    
T  37381798 ataaatagttcataaatcgaaataaaagaggttcgtcactttgtcaacaaaagtacgatttaaaataagagatatgaaatataacctgtcaatagcgtgc 37381897  T
Q  167 taaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctc 258  Q
    | ||| | |||||| || ||||||  ||||||||| |||||||| |||||| || ||||||||| ||||||||||| |||||||||||||||    
T  37381898 tgaataaaattaggaggcaaatgtcatttccgagacctctttgcagtgaatgttcgaataatataaacatcatcaaatgacttgaatatctc 37381989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 51262177 - 51262035
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||| ||||||||||  | ||| || ||| | |||||| ||||||||| | |||||| |||||||||||||| | ||| |||||| || ||    
T  51262177 aaaagtacaatttaaaataagagacttaaaacataacctgtcaatagtgtgctaaataaaattaggaggtaaatgttcttttcaagacctctttacgatg 51262078  T
Q  215 aatatttgaataatatcaacatcatcaagtgacttgaatatct 257  Q
    ||| || ||||||||||||||||||||||||||||||||||||    
T  51262077 aatgttcgaataatatcaacatcatcaagtgacttgaatatct 51262035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 259
Target Start/End: Complemental strand, 43137368 - 43137181
Alignment:
Q  74 aatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagagat--gaaatatgaccagc-aatagcgtgctaaa 170  Q
    |||||||||||||| |||||||| ||||  ||||       ||||||| |||||||| |||||||||||  ||||||| | | || ||||| ||||||||    
T  43137368 aatagtcataaatcgaaataaaagaggtttgtcattttttcaacaaaaatacaatttaaaataagagatatgaaatataatctgccaatagtgtgctaaa 43137269  T
Q  171 ttatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    | | |||||| |||||||    |||| |||| ||||| |||| |||| || ||||||||||||||||||||||||||||||||||||||    
T  43137268 taaaattaggaggtaaataccttttctgagacctctt-gcggcgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 43137181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 242
Target Start/End: Original strand, 24988743 - 24988917
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgct 167  Q
    ||||||| |||||||||||||||||| ||   |||||       || ||||||||||||||||||||||||  ||||| || | | | |||||| |||||    
T  24988743 ataaataatcataaatcaaaataaaagagactcgtcattttgtcaataaaagtacaatttgaaataagagagatgaaacataatctggcaatagtgtgct 24988842  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaa 242  Q
    |||| | |||||| | || |||  |||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  24988843 aaataaaattaggagatacatgccctttccgagacctctttgcggtgaatgttcgaataatatcaacatcatcaa 24988917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 51408539 - 51408660
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataag--agatgaaatatgaccag-caatagcgtgct 167  Q
    |||||||||||||||||||||||||||| || |||||       ||||||||||||||||||||||||  ||||||||||| ||  | ||||||||||||    
T  51408539 ataaatagtcataaatcaaaataaaaaaagttcgtcattttttcaacaaaagtacaatttgaaataagaaagatgaaatataacatgtcaatagcgtgct 51408638  T
Q  168 aaattatattagggggtaaatg 189  Q
    |||| | |||||| ||||||||    
T  51408639 aaataaaattaggaggtaaatg 51408660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 249
Target Start/End: Original strand, 22934773 - 22934910
Alignment:
Q  115 aacaaaagtacaatttgaaataa--gagatgaaatatgacc-agcaatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcg 211  Q
    |||||||||||||||||||||||  |||||||||||| |   | |||||| ||  ||||  | |||| | ||||||||  |||||||||| |||||||||    
T  22934773 aacaaaagtacaatttgaaataacagagatgaaatataatatatcaatagtgtcttaaacaaaattaagaggtaaatgacctttccgagacctctttgcg 22934872  T
Q  212 gtgaatatttgaataatatcaacatcatcaagtgactt 249  Q
    |||||| ||  |||||||||||||||||||||||||||    
T  22934873 gtgaatgttctaataatatcaacatcatcaagtgactt 22934910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 24908412 - 24908514
Alignment:
Q  157 aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatc 256  Q
    ||||||||||||||| | |||||| |||||||   ||||||| || ||||||   |||||| || |||||||||||||||| ||||| ||||||||||||    
T  24908412 aatagcgtgctaaataaaattaggaggtaaataccctttccgcgacctctttcgagtgaatgttcgaataatatcaacatcttcaagcgacttgaatatc 24908511  T
Q  257 tcc 259  Q
    |||    
T  24908512 tcc 24908514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 259
Target Start/End: Complemental strand, 15668111 - 15668027
Alignment:
Q  175 attagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||| ||||||||   ||||||| | |||||||  ||| || || ||||||||||||||||||||||||||||||||||||||    
T  15668111 attaggaggtaaatgccttttccgatacctctttgttgtgcatgttcgaataatatcaacatcatcaagtgacttgaatatctcc 15668027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 50091512 - 50091476
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtca 107  Q
    |||||||||||||||||||||||||| |||| |||||    
T  50091512 ataaatagtcataaatcaaaataaaagaggttcgtca 50091476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 214091 - 214282
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataaga--gatgaaatatgaccagc-aatagcgtgct 167  Q
    ||||||||||||||||| |||||||| |||| | |||       |||||||||||||||| ||||||||  |||||||||| ||| || |||||||||||    
T  214091 ataaatagtcataaatcgaaataaaagaggttcttcattttttcaacaaaagtacaattttaaataagaaagatgaaatataacctgccaatagcgtgct 214190  T
Q  168 aaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||| | |||||| |||||||   ||||||| || ||||||   || ||| || ||||||||||||||||||||||||||| ||||||||||    
T  214191 aaataaaattaggaggtaaattccctttccgcgacctcttttgagttaatgttcgaataatatcaacatcatcaagtgactcgaatatctcc 214282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 259
Target Start/End: Complemental strand, 17936 - 17794
Alignment:
Q  118 aaaagtacaatttgaaataagagatgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaa 216  Q
    ||||||||||||||||| |||||||||||  | | | | |||||| ||||||||| | |||||| | ||||||| ||||| |||| ||||||||||||||    
T  17936 aaaagtacaatttgaaacaagagatgaaacgtaatctgtcaatagtgtgctaaataaaattaggagttaaatgtcctttcggagacctctttgcggtgaa 17837  T
Q  217 tatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    | || ||||||||||||||||| |||||||||| |||||||||    
T  17836 tgttcgaataatatcaacatcagcaagtgacttaaatatctcc 17794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 260119 - 259976
Alignment:
Q  115 aacaaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcg 211  Q
    ||||||| ||||||||||| |||||||  |||||||| | | | |||||||||||||||| | |||||| ||||||||   ||||||||| |||||||||    
T  260119 aacaaaattacaatttgaattaagagagatgaaatataatctgtcaatagcgtgctaaataaaattaggtggtaaatgccatttccgagacctctttgcg 260020  T
Q  212 gtgaatatttgaataatatcaacatcatcaagtgacttgaatat 255  Q
    |||||| || ||||||||||||  ||||||||||||||||||||    
T  260019 gtgaatgttcgaataatatcaatgtcatcaagtgacttgaatat 259976  T

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Target: scaffold0168 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 15970 - 15868
Alignment:
Q  157 aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatc 256  Q
    |||||||||||| || | |||||| ||||||||  ||||||||||| |||||||||||||| || ||||||||||||  ||||||||||| |||||||||    
T  15970 aatagcgtgctagataaaattaggaggtaaatgccctttccgagatttctttgcggtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatc 15871  T
Q  257 tcc 259  Q
    |||    
T  15870 tcc 15868  T

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Target: scaffold0012 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 197261 - 197159
Alignment:
Q  157 aatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatc 256  Q
    |||||||||||| || | |||||| ||||||||  |||| |||||| |||||||||||||| |||||||||||||||  ||||||||||| |||||||||    
T  197261 aatagcgtgctagataaaattaggaggtaaatgcccttttcgagatttctttgcggtgaatgtttgaataatatcaatgtcatcaagtgatttgaatatc 197162  T
Q  257 tcc 259  Q
    |||    
T  197161 tcc 197159  T

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Target: scaffold0002 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 257
Target Start/End: Original strand, 435326 - 435469
Alignment:
Q  119 aaagtacaatttgaaataagagat--gaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtga 215  Q
    |||||| |||||||||||||||||  ||||||| | | | |||||| ||||||||| | |||||| ||||||||| |||| ||||| ||||| ||||| |    
T  435326 aaagtataatttgaaataagagatatgaaatataatctgacaatagtgtgctaaataaaattaggaggtaaatgtccttttcgagacctcttcgcggtta 435425  T
Q  216 atatttg--aataatatcaacatcatcaagtgacttgaatatct 257  Q
    |||| |   |||||||||||||| ||||||||||||||||||||    
T  435426 atatgttctaataatatcaacataatcaagtgacttgaatatct 435469  T

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Target: scaffold0726 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0726
Description:

Target: scaffold0726; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 1081 - 954
Alignment:
Q  118 aaaagtacaatttgaaataagaga--tgaaatatgaccag-caatagcgtgctaaattatattagggggtaaatgttctttccgagatctctttgcggtg 214  Q
    ||||||||||||||||||||||||  ||||| || | | | |||||| ||||||||| | |||||| | ||||||  ||||| |||| ||||||||||||    
T  1081 aaaagtacaatttgaaataagagagatgaaacataatctggcaatagtgtgctaaataaaattaggagataaatgccctttcggagacctctttgcggtg 982  T
Q  215 aatatttgaataatatcaacatcatcaa 242  Q
    ||| || |||||||||||||||||||||    
T  981 aatgttcgaataatatcaacatcatcaa 954  T

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Target: scaffold0198 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 1545 - 1450
Alignment:
Q  164 tgctaaattatattagggggtaaatgttctttccgagatctctttgcggtgaatatttgaataatatcaacatcatcaagtgacttgaatatctcc 259  Q
    |||||||| | |||||| || |||||   ||||||||| ||||||||  ||||| || ||||||||||||||||||||||||| ||||||||||||    
T  1545 tgctaaataaaattaggaggcaaatgccatttccgagacctctttgcaatgaatgttcgaataatatcaacatcatcaagtgatttgaatatctcc 1450  T

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Target: scaffold0170 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 9321 - 9241
Alignment:
Q  71 ataaatagtcataaatcaaaataaaaaaggtccgtcannnnnnnaacaaaagtacaatttgaaataag--agatgaaatat 149  Q
    |||||||||||||||| ||||||||| |||| |||||       ||||||||||||||||||||||||  |||||||||||    
T  9321 ataaatagtcataaattaaaataaaagaggttcgtcattttttcaacaaaagtacaatttgaaataagaaagatgaaatat 9241  T

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