View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19511_high_20 (Length: 247)
Name: NF19511_high_20
Description: NF19511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19511_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 14 - 233
Target Start/End: Complemental strand, 40595052 - 40594833
Alignment:
| Q |
14 |
catcaacaaatgcaaatggttttttcatcctttgaatcagtagcaggtcttaattcagctactccttacatccatctggctttgaagacggtatcaaaac |
113 |
Q |
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| T |
40595052 |
catcaacaaatgcaaatggttttttcatcctttgaatcagtagcaggtcttaattcagctactccttacatcgatctggctttgaagacggtatcaaaac |
40594953 |
T |
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| Q |
114 |
acttcaagtgcctaaacaatgctatttcaaatcagctcaaccatataagcgaagtcctgcgaaatgatttgtcgataccaaccacaaccaatagtactaa |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40594952 |
acttcaagtgcctaaacaatgctatttcaaatcagctcaaccatataagcgaagtcctgcgaaatgatttgtcgataccaaccacaaccaatagtactaa |
40594853 |
T |
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| Q |
214 |
actagttgacactaataatg |
233 |
Q |
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|||||||||||||||||||| |
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| T |
40594852 |
actagttgacactaataatg |
40594833 |
T |
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