View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19511_high_8 (Length: 431)

Name: NF19511_high_8
Description: NF19511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19511_high_8
NF19511_high_8
[»] chr8 (54 HSPs)
chr8 (71-409)||(40109646-40109978)
chr8 (71-176)||(13335150-13335255)
chr8 (73-176)||(39405697-39405801)
chr8 (72-152)||(4428452-4428531)
chr8 (75-176)||(10180024-10180126)
chr8 (71-176)||(17719335-17719441)
chr8 (71-152)||(26626213-26626295)
chr8 (73-152)||(45425767-45425848)
chr8 (75-152)||(50753-50831)
chr8 (71-168)||(5053238-5053335)
chr8 (75-176)||(15675373-15675474)
chr8 (71-152)||(22771936-22772018)
chr8 (221-299)||(39890676-39890754)
chr8 (221-299)||(44648516-44648593)
chr8 (73-176)||(29226605-29226708)
chr8 (71-152)||(36006988-36007072)
chr8 (77-152)||(1875840-1875916)
chr8 (75-167)||(42182016-42182107)
chr8 (75-176)||(11977013-11977115)
chr8 (70-152)||(39301057-39301140)
chr8 (71-152)||(36967307-36967388)
chr8 (71-147)||(2767403-2767480)
chr8 (106-167)||(7172883-7172944)
chr8 (71-176)||(9300190-9300298)
chr8 (75-150)||(396714-396790)
chr8 (221-289)||(34393947-34394015)
chr8 (221-292)||(1875582-1875653)
chr8 (222-273)||(10179956-10180007)
chr8 (71-176)||(39482545-39482654)
chr8 (71-176)||(44761571-44761675)
chr8 (71-176)||(34948764-34948868)
chr8 (73-152)||(40028446-40028527)
chr8 (221-278)||(7172969-7173026)
chr8 (75-152)||(14855035-14855115)
chr8 (221-274)||(44761502-44761555)
chr8 (222-274)||(31331464-31331516)
chr8 (221-273)||(39482670-39482722)
chr8 (222-270)||(42887056-42887104)
chr8 (222-309)||(17719231-17719318)
chr8 (227-274)||(34948695-34948742)
chr8 (71-149)||(41091930-41092007)
chr8 (107-176)||(4924144-4924214)
chr8 (71-176)||(21649438-21649544)
chr8 (75-176)||(31231667-31231769)
chr8 (222-292)||(41092050-41092120)
chr8 (221-274)||(21216109-21216162)
chr8 (75-147)||(34394064-34394137)
chr8 (74-150)||(35504974-35505050)
chr8 (222-274)||(7703164-7703216)
chr8 (104-152)||(17654530-17654578)
chr8 (75-176)||(21216178-21216279)
chr8 (222-278)||(39300945-39301001)
chr8 (71-150)||(39466141-39466220)
chr8 (117-149)||(39890614-39890646)
[»] chr1 (71 HSPs)
chr1 (71-176)||(37506057-37506163)
chr1 (72-176)||(39864045-39864150)
chr1 (73-176)||(7759150-7759254)
chr1 (71-149)||(12039015-12039094)
chr1 (71-152)||(6785189-6785271)
chr1 (71-176)||(33733341-33733447)
chr1 (71-176)||(49224065-49224171)
chr1 (71-153)||(23169095-23169176)
chr1 (71-152)||(24991756-24991839)
chr1 (70-152)||(35682897-35682979)
chr1 (71-152)||(26093327-26093409)
chr1 (73-152)||(40144950-40145030)
chr1 (71-176)||(4659710-4659815)
chr1 (71-144)||(17988856-17988930)
chr1 (71-176)||(20209919-20210025)
chr1 (75-176)||(27721470-27721571)
chr1 (71-152)||(31042730-31042812)
chr1 (75-152)||(34031630-34031708)
chr1 (75-176)||(52429279-52429383)
chr1 (75-142)||(29074817-29074884)
chr1 (24-152)||(40261108-40261236)
chr1 (71-176)||(35367735-35367841)
chr1 (71-176)||(38787271-38787380)
chr1 (75-144)||(3312056-3312126)
chr1 (71-176)||(37177769-37177875)
chr1 (221-318)||(2981827-2981924)
chr1 (76-152)||(22856340-22856417)
chr1 (222-278)||(26257946-26258002)
chr1 (75-176)||(2572405-2572508)
chr1 (221-292)||(28749046-28749117)
chr1 (71-152)||(36701856-36701936)
chr1 (71-152)||(36717960-36718040)
chr1 (71-141)||(43500854-43500925)
chr1 (98-152)||(10587946-10588000)
chr1 (75-176)||(11449824-11449924)
chr1 (222-292)||(39864167-39864237)
chr1 (223-272)||(2572525-2572574)
chr1 (71-150)||(7351572-7351649)
chr1 (71-152)||(26252562-26252646)
chr1 (71-139)||(41121939-41122008)
chr1 (71-123)||(44426838-44426891)
chr1 (224-292)||(12039140-12039208)
chr1 (221-289)||(22181391-22181459)
chr1 (73-152)||(28748926-28749006)
chr1 (226-274)||(31042857-31042905)
chr1 (222-274)||(36701977-36702029)
chr1 (222-274)||(36718081-36718133)
chr1 (221-289)||(49223981-49224049)
chr1 (222-273)||(6160470-6160521)
chr1 (222-273)||(16395058-16395109)
chr1 (223-273)||(5179410-5179460)
chr1 (71-112)||(6160593-6160635)
chr1 (75-152)||(9379169-9379246)
chr1 (71-152)||(14757697-14757778)
chr1 (70-111)||(15699072-15699114)
chr1 (71-176)||(26256167-26256273)
chr1 (83-152)||(35432180-35432250)
chr1 (73-110)||(37275536-37275574)
chr1 (221-275)||(44707769-44707823)
chr1 (78-176)||(916967-917063)
chr1 (107-176)||(37539097-37539166)
chr1 (103-152)||(39395230-39395279)
chr1 (73-152)||(39887769-39887850)
chr1 (99-152)||(44707863-44707916)
chr1 (130-159)||(45118642-45118671)
chr1 (103-151)||(11642135-11642183)
chr1 (71-150)||(15778048-15778127)
chr1 (221-273)||(20209851-20209903)
chr1 (221-273)||(23169004-23169056)
chr1 (75-152)||(24880809-24880888)
chr1 (222-274)||(41121835-41121887)
[»] chr3 (60 HSPs)
chr3 (71-174)||(44301494-44301599)
chr3 (75-176)||(37311886-37311989)
chr3 (71-152)||(10366749-10366831)
chr3 (71-173)||(51838038-51838142)
chr3 (71-176)||(43253939-43254046)
chr3 (71-176)||(53560149-53560256)
chr3 (71-152)||(36460516-36460598)
chr3 (71-176)||(36476517-36476623)
chr3 (76-176)||(39043833-39043932)
chr3 (71-138)||(43715239-43715307)
chr3 (71-152)||(30711007-30711088)
chr3 (70-176)||(37497423-37497531)
chr3 (71-154)||(9022578-9022660)
chr3 (71-152)||(19822944-19823026)
chr3 (71-173)||(27471268-27471371)
chr3 (71-152)||(3901249-3901331)
chr3 (222-292)||(30190649-30190719)
chr3 (71-176)||(30190736-30190842)
chr3 (71-140)||(37804671-37804740)
chr3 (71-167)||(25108610-25108706)
chr3 (71-115)||(30710582-30710627)
chr3 (83-176)||(37695742-37695837)
chr3 (73-152)||(38137546-38137626)
chr3 (75-176)||(27549361-27549464)
chr3 (221-292)||(37695655-37695726)
chr3 (71-149)||(42469784-42469861)
chr3 (221-292)||(43253852-43253923)
chr3 (222-273)||(49830185-49830236)
chr3 (73-152)||(3313187-3313269)
chr3 (71-152)||(12904797-12904879)
chr3 (222-292)||(14194611-14194681)
chr3 (71-152)||(17652686-17652767)
chr3 (222-292)||(28690771-28690841)
chr3 (71-176)||(33458982-33459086)
chr3 (71-165)||(37773051-37773148)
chr3 (99-152)||(8679154-8679206)
chr3 (221-274)||(42278720-42278773)
chr3 (222-274)||(8679061-8679113)
chr3 (221-273)||(10366650-10366702)
chr3 (222-274)||(37312006-37312058)
chr3 (222-274)||(37772971-37773023)
chr3 (222-274)||(52206854-52206906)
chr3 (222-273)||(24569108-24569159)
chr3 (221-292)||(34750551-34750622)
chr3 (71-176)||(40462254-40462358)
chr3 (103-162)||(45811590-45811648)
chr3 (75-152)||(11905760-11905837)
chr3 (71-152)||(31158611-31158692)
chr3 (71-155)||(34302340-34302425)
chr3 (71-152)||(34957437-34957518)
chr3 (75-152)||(41038493-41038571)
chr3 (71-144)||(54726418-54726492)
chr3 (76-152)||(23068137-23068213)
chr3 (221-258)||(24245117-24245154)
chr3 (221-278)||(29023969-29024026)
chr3 (239-292)||(33491072-33491125)
chr3 (227-292)||(38795405-38795470)
chr3 (221-273)||(3901157-3901209)
chr3 (221-273)||(11632136-11632188)
chr3 (71-176)||(33491435-33491543)
[»] chr2 (50 HSPs)
chr2 (71-152)||(35313820-35313902)
chr2 (75-168)||(43410363-43410457)
chr2 (71-176)||(17695261-17695369)
chr2 (71-176)||(28186147-28186253)
chr2 (71-176)||(14523446-14523552)
chr2 (75-176)||(5272213-5272314)
chr2 (71-152)||(5789746-5789827)
chr2 (71-152)||(34120535-34120617)
chr2 (73-152)||(25904722-25904803)
chr2 (71-168)||(7438934-7439033)
chr2 (71-155)||(36004887-36004971)
chr2 (71-176)||(3323346-3323452)
chr2 (71-152)||(9458364-9458445)
chr2 (222-292)||(16805937-16806007)
chr2 (222-292)||(16845218-16845288)
chr2 (71-176)||(36354517-36354622)
chr2 (71-152)||(7494936-7495019)
chr2 (71-176)||(37322362-37322467)
chr2 (90-173)||(16028268-16028351)
chr2 (221-292)||(5789635-5789706)
chr2 (71-152)||(25637413-25637496)
chr2 (71-137)||(34120634-34120701)
chr2 (85-144)||(43730348-43730407)
chr2 (222-292)||(19937733-19937803)
chr2 (71-176)||(36794217-36794323)
chr2 (71-152)||(39785518-39785600)
chr2 (75-147)||(19444083-19444156)
chr2 (103-152)||(23492837-23492886)
chr2 (73-176)||(26863432-26863539)
chr2 (103-152)||(28170681-28170730)
chr2 (71-111)||(34451471-34451512)
chr2 (71-152)||(45235512-45235596)
chr2 (221-289)||(16463744-16463812)
chr2 (104-176)||(39691457-39691529)
chr2 (124-176)||(43730603-43730654)
chr2 (71-121)||(11742658-11742709)
chr2 (71-176)||(19937317-19937424)
chr2 (103-154)||(38187979-38188029)
chr2 (222-273)||(43699605-43699656)
chr2 (221-292)||(45235636-45235707)
chr2 (222-292)||(16377643-16377713)
chr2 (222-292)||(17695386-17695456)
chr2 (75-152)||(34225527-34225605)
chr2 (87-176)||(35242371-35242461)
chr2 (221-274)||(8947057-8947110)
chr2 (99-176)||(8947126-8947202)
chr2 (71-115)||(16463620-16463665)
chr2 (100-144)||(13435683-13435727)
chr2 (71-176)||(15359161-15359269)
chr2 (222-278)||(43115803-43115859)
[»] chr6 (41 HSPs)
chr6 (72-176)||(181491-181595)
chr6 (71-155)||(12307691-12307775)
chr6 (71-152)||(11656045-11656128)
chr6 (75-148)||(34299931-34300006)
chr6 (222-296)||(1225103-1225177)
chr6 (71-152)||(5302284-5302366)
chr6 (71-152)||(7920174-7920254)
chr6 (71-152)||(29363237-29363321)
chr6 (71-150)||(30716832-30716913)
chr6 (73-151)||(23397716-23397796)
chr6 (71-176)||(6801863-6801970)
chr6 (71-176)||(24983524-24983628)
chr6 (99-176)||(8695007-8695084)
chr6 (72-153)||(27367523-27367607)
chr6 (72-153)||(27457870-27457954)
chr6 (226-278)||(21804531-21804583)
chr6 (221-268)||(181611-181658)
chr6 (71-174)||(21010104-21010210)
chr6 (73-152)||(21425656-21425738)
chr6 (71-176)||(34657637-34657746)
chr6 (75-176)||(6834444-6834545)
chr6 (75-152)||(15058055-15058132)
chr6 (71-152)||(23142601-23142682)
chr6 (224-269)||(1955990-1956035)
chr6 (221-274)||(24983455-24983508)
chr6 (221-273)||(31894217-31894269)
chr6 (71-174)||(32440722-32440828)
chr6 (222-273)||(1063610-1063661)
chr6 (222-309)||(7920294-7920381)
chr6 (71-150)||(21478194-21478276)
chr6 (71-152)||(31894309-31894388)
chr6 (99-152)||(1517247-1517298)
chr6 (99-152)||(1519334-1519385)
chr6 (221-270)||(13087585-13087634)
chr6 (221-278)||(14018764-14018821)
chr6 (71-115)||(27367235-27367280)
chr6 (71-115)||(27457582-27457627)
chr6 (221-274)||(32440651-32440704)
chr6 (222-274)||(3291774-3291826)
chr6 (221-273)||(23397628-23397680)
chr6 (119-167)||(25418049-25418096)
[»] chr7 (77 HSPs)
chr7 (71-176)||(11373511-11373617)
chr7 (71-176)||(34947440-34947546)
chr7 (71-174)||(32346137-32346241)
chr7 (71-152)||(759198-759280)
chr7 (73-150)||(7457530-7457607)
chr7 (71-152)||(21760091-21760173)
chr7 (71-152)||(28202416-28202498)
chr7 (71-170)||(23745420-23745521)
chr7 (73-176)||(2459413-2459517)
chr7 (71-176)||(21350708-21350815)
chr7 (75-148)||(34100658-34100732)
chr7 (71-152)||(37245630-37245712)
chr7 (71-152)||(48608807-48608888)
chr7 (75-176)||(3178287-3178391)
chr7 (72-176)||(41506148-41506253)
chr7 (71-152)||(83324-83407)
chr7 (71-152)||(28103670-28103755)
chr7 (71-152)||(42935598-42935680)
chr7 (71-152)||(25571360-25571441)
chr7 (71-123)||(27920926-27920979)
chr7 (71-152)||(36790678-36790762)
chr7 (71-176)||(21390234-21390341)
chr7 (75-157)||(30107072-30107155)
chr7 (71-152)||(31930606-31930691)
chr7 (222-273)||(44180268-44180319)
chr7 (71-152)||(8592547-8592629)
chr7 (76-165)||(17610632-17610722)
chr7 (71-176)||(19271816-19271921)
chr7 (71-176)||(24516372-24516478)
chr7 (75-176)||(37490319-37490421)
chr7 (71-152)||(40076258-40076340)
chr7 (71-176)||(43873863-43873969)
chr7 (221-278)||(34947562-34947619)
chr7 (100-152)||(46478400-46478453)
chr7 (71-150)||(9785928-9786008)
chr7 (222-278)||(22738764-22738820)
chr7 (75-165)||(39519288-39519380)
chr7 (222-273)||(34100562-34100613)
chr7 (71-152)||(6495041-6495122)
chr7 (235-292)||(12631381-12631438)
chr7 (98-143)||(33932057-33932102)
chr7 (104-176)||(37490437-37490509)
chr7 (222-274)||(47045468-47045519)
chr7 (71-150)||(16904317-16904399)
chr7 (225-268)||(17609350-17609393)
chr7 (225-268)||(17609593-17609636)
chr7 (225-268)||(17609836-17609879)
chr7 (225-268)||(17610079-17610122)
chr7 (225-268)||(17610322-17610365)
chr7 (71-152)||(23670425-23670508)
chr7 (222-273)||(24516304-24516355)
chr7 (71-152)||(37850834-37850914)
chr7 (103-145)||(7348266-7348307)
chr7 (226-292)||(7463280-7463346)
chr7 (73-146)||(10042223-10042297)
chr7 (118-176)||(13906686-13906743)
chr7 (222-292)||(30866030-30866100)
chr7 (73-152)||(33819154-33819236)
chr7 (71-152)||(44424085-44424166)
chr7 (221-274)||(83447-83500)
chr7 (221-278)||(8592450-8592507)
chr7 (99-176)||(22738671-22738747)
chr7 (98-175)||(29121472-29121548)
chr7 (103-144)||(31327374-31327415)
chr7 (103-144)||(35016384-35016425)
chr7 (71-152)||(38391692-38391770)
chr7 (221-278)||(40076377-40076434)
chr7 (221-278)||(43873985-43874042)
chr7 (221-273)||(5524442-5524494)
chr7 (71-176)||(7463152-7463259)
chr7 (103-175)||(14063276-14063347)
chr7 (103-175)||(14373304-14373375)
chr7 (128-168)||(30546446-30546486)
chr7 (222-274)||(32018726-32018778)
chr7 (75-154)||(32526602-32526681)
chr7 (221-273)||(38391810-38391862)
chr7 (221-273)||(39308648-39308700)
[»] chr5 (47 HSPs)
chr5 (71-176)||(41496013-41496119)
chr5 (71-152)||(6315875-6315957)
chr5 (73-176)||(6753732-6753836)
chr5 (73-176)||(9515668-9515775)
chr5 (74-152)||(19929882-19929961)
chr5 (71-176)||(1248678-1248784)
chr5 (71-176)||(6753962-6754068)
chr5 (71-176)||(27542728-27542834)
chr5 (71-176)||(40899851-40899957)
chr5 (71-147)||(2588166-2588243)
chr5 (76-176)||(4440959-4441060)
chr5 (71-149)||(6615980-6616060)
chr5 (71-152)||(11796265-11796344)
chr5 (71-152)||(4818483-4818566)
chr5 (71-152)||(8698241-8698324)
chr5 (221-292)||(8724996-8725067)
chr5 (71-176)||(8725083-8725189)
chr5 (222-292)||(15439306-15439376)
chr5 (222-292)||(37184066-37184136)
chr5 (76-176)||(21060569-21060669)
chr5 (71-139)||(40616483-40616552)
chr5 (123-163)||(26662983-26663023)
chr5 (123-163)||(26934578-26934618)
chr5 (221-272)||(9515801-9515852)
chr5 (79-155)||(24455056-24455130)
chr5 (71-152)||(3348228-3348310)
chr5 (71-152)||(42803718-42803800)
chr5 (225-278)||(31655112-31655165)
chr5 (73-152)||(40530322-40530403)
chr5 (71-147)||(41062263-41062339)
chr5 (236-292)||(8698379-8698435)
chr5 (222-274)||(27580656-27580708)
chr5 (221-273)||(40530230-40530282)
chr5 (221-292)||(4818606-4818677)
chr5 (117-176)||(29374322-29374381)
chr5 (222-292)||(1248591-1248661)
chr5 (71-168)||(15818564-15818662)
chr5 (224-274)||(30512690-30512740)
chr5 (224-274)||(30553030-30553080)
chr5 (222-292)||(32440197-32440267)
chr5 (109-174)||(2232145-2232210)
chr5 (71-150)||(7330441-7330521)
chr5 (222-270)||(11904262-11904310)
chr5 (221-289)||(40899973-40900041)
chr5 (88-152)||(41478733-41478800)
chr5 (88-152)||(41480099-41480166)
chr5 (221-277)||(42803622-42803678)
[»] chr4 (75 HSPs)
chr4 (71-168)||(42616993-42617091)
chr4 (71-176)||(51624719-51624825)
chr4 (75-152)||(28911262-28911340)
chr4 (71-152)||(49428448-49428529)
chr4 (73-176)||(49746895-49747000)
chr4 (75-176)||(16821413-16821516)
chr4 (71-152)||(35380439-35380522)
chr4 (75-168)||(2653357-2653451)
chr4 (71-176)||(47773101-47773207)
chr4 (71-150)||(49176042-49176123)
chr4 (221-292)||(34360710-34360781)
chr4 (71-152)||(38405208-38405291)
chr4 (71-152)||(5841534-5841616)
chr4 (71-152)||(7061770-7061852)
chr4 (76-176)||(30682278-30682380)
chr4 (75-152)||(6609694-6609776)
chr4 (72-152)||(6643766-6643846)
chr4 (71-176)||(21240786-21240888)
chr4 (125-174)||(30260992-30261041)
chr4 (76-176)||(19265744-19265847)
chr4 (71-122)||(25233115-25233167)
chr4 (98-166)||(46385448-46385516)
chr4 (71-152)||(4972506-4972587)
chr4 (71-152)||(11907705-11907787)
chr4 (75-176)||(34360592-34360694)
chr4 (71-152)||(36985719-36985801)
chr4 (71-176)||(52859881-52859982)
chr4 (221-278)||(3689617-3689674)
chr4 (71-152)||(28500989-28501073)
chr4 (71-152)||(35311329-35311413)
chr4 (71-147)||(26147727-26147806)
chr4 (222-274)||(36985842-36985894)
chr4 (71-152)||(22129975-22130058)
chr4 (221-274)||(6643673-6643726)
chr4 (225-274)||(7061677-7061726)
chr4 (76-175)||(7986914-7987012)
chr4 (107-176)||(17237378-17237447)
chr4 (75-162)||(17512435-17512524)
chr4 (75-152)||(44536302-44536381)
chr4 (75-176)||(52247510-52247611)
chr4 (75-150)||(9301469-9301545)
chr4 (222-278)||(42616912-42616968)
chr4 (222-274)||(47464378-47464430)
chr4 (222-274)||(49428355-49428407)
chr4 (221-273)||(51625138-51625190)
chr4 (222-273)||(462014-462065)
chr4 (71-152)||(2066724-2066804)
chr4 (222-273)||(2653476-2653527)
chr4 (71-152)||(3689499-3689577)
chr4 (222-313)||(4744710-4744801)
chr4 (222-273)||(11288644-11288695)
chr4 (75-152)||(53412044-53412123)
chr4 (222-269)||(53412164-53412211)
chr4 (228-274)||(2158013-2158059)
chr4 (76-152)||(3171503-3171581)
chr4 (222-292)||(28500886-28500956)
chr4 (75-151)||(40122961-40123039)
chr4 (221-278)||(2942654-2942711)
chr4 (221-274)||(11907612-11907665)
chr4 (99-152)||(12728784-12728836)
chr4 (221-274)||(17114495-17114548)
chr4 (221-278)||(20612180-20612237)
chr4 (98-152)||(43237202-43237258)
chr4 (72-152)||(49579284-49579363)
chr4 (103-152)||(50442958-50443007)
chr4 (104-145)||(50872329-50872370)
chr4 (221-274)||(52859812-52859865)
chr4 (73-152)||(5618483-5618562)
chr4 (71-114)||(8175734-8175777)
chr4 (116-152)||(20612277-20612313)
chr4 (221-273)||(32469962-32470014)
chr4 (222-274)||(43237299-43237351)
chr4 (221-273)||(46396897-46396949)
chr4 (75-150)||(46396979-46397055)
chr4 (75-152)||(54202133-54202211)
[»] scaffold0095 (2 HSPs)
scaffold0095 (73-176)||(50139-50243)
scaffold0095 (71-150)||(22281-22360)
[»] scaffold0159 (2 HSPs)
scaffold0159 (71-152)||(34119-34200)
scaffold0159 (221-292)||(34008-34079)
[»] scaffold0003 (1 HSPs)
scaffold0003 (71-168)||(252888-252985)
[»] scaffold0015 (2 HSPs)
scaffold0015 (73-154)||(42813-42894)
scaffold0015 (221-274)||(42932-42985)
[»] scaffold1809 (1 HSPs)
scaffold1809 (72-152)||(784-864)
[»] scaffold0328 (1 HSPs)
scaffold0328 (71-152)||(8081-8164)
[»] scaffold0330 (1 HSPs)
scaffold0330 (71-176)||(5325-5429)
[»] scaffold0016 (1 HSPs)
scaffold0016 (75-152)||(76229-76307)
[»] scaffold0294 (1 HSPs)
scaffold0294 (71-152)||(16972-17050)
[»] scaffold0188 (1 HSPs)
scaffold0188 (222-274)||(6793-6845)


Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 71 - 409
Target Start/End: Original strand, 40109646 - 40109978
Alignment:
Q  71 tctcaaaataattgtcactttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactcta 170  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40109646 tctcaaaataattgtcattttagaatataatgcaacatttattatatttttccactaatatattcttatttattgaatttcactctatttaactactcta 40109745  T
Q  171 ctaacttnnnnnnnnnnnnnnnnnnnnnnttattctactaactacaaatagttttagtaaattatactaattttactattgaaatcaattcaattaatca 270  Q
    |||||||                      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40109746 ctaacttaaaaccaaaaaaaaa-------ttattctactaactacaaatagttttagtaaattatactaattttactattgaaatcaattcaattaatca 40109838  T
Q  271 tttctttagaaaccgtgcacaactctaaatcgaatattaaaataagattcaataaagtcccttgttgtaatatgttatatg-aaaataaaaaacgtattc 369  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  40109839 tttctttaaaaaccgtgcacaactctaaatcgaatattaaaataagattcaataaagtcccttgttgtaatatgttatatgaaaaaaaaaaaacgtattc 40109938  T
Q  370 attagacatttacaaattattttatttatgtttaatgttt 409  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  40109939 attagacatttacaaatcattttatttatgtttaatgttt 40109978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 13335150 - 13335255
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||||| || ||||| || |||||||||||||||    | |||||||||||    
T  13335150 tctcaaaataattgtcactttagaataccaatgcaacatttattat-tttttccattattataccctgatttattgaatttcatcaaacttaactactct 13335248  T
Q  170 actaact 176  Q
    |||||||    
T  13335249 actaact 13335255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 39405697 - 39405801
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 171  Q
    |||||||||||||||||||||||||| |||||| ||||||||||  |||| ||||| ||||| |||||||||| ||||||| || | |||| ||||| ||    
T  39405697 tcaaaataattgtcactttagaatatcaatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccac 39405796  T
Q  172 taact 176  Q
    |||||    
T  39405797 taact 39405801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 4428531 - 4428452
Alignment:
Q  72 ctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||  |||||||||| |||||| |||||||||||||||||    
T  4428531 ctcaaaataattgtcactttagaatatcaatgtaacaattattat--ttttccactattatacttttatttattgaatttca 4428452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 10180126 - 10180024
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    |||||||||||||||||||||||  |||||||||||||||||  ||||| | || ||||| |||||| ||||||||||| || | |||||||||| ||||    
T  10180126 aaaataattgtcactttagaataccaatgcaacatttattattattttctattattatacacttattaattgaatttcattcaacttaactactccacta 10180027  T
Q  174 act 176  Q
    |||    
T  10180026 act 10180024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 17719441 - 17719335
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||| |||||||| || |||||  ||||||||| |||||||  | | ||||||||||     
T  17719441 tctctaaataattgtcactttagaataccaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaacttaactactcc 17719342  T
Q  170 actaact 176  Q
    |||||||    
T  17719341 actaact 17719335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 26626295 - 26626213
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||| |||| ||| || ||||| ||||||||||||||||||    
T  26626295 tctcaaaataattgtcactttaaaatatcaatgcagcatttattattttttcccattattatacccttatttattgaatttca 26626213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 45425848 - 45425767
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||| ||||| |||| |||||||||||| ||||| |||||| ||||| ||||||||||||||||||    
T  45425848 tcaaaataattgtcactttacaatatcaatgtaacatttattattttttttccactattatacccttatttattgaatttca 45425767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 50753 - 50831
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||| |||||| |||||||||| |||||||| || |||||  ||||||||| |||||||    
T  50753 aaaataattgtcactttagaatatcaatgcagcatttattatctttttccattattatacctttatttattaaatttca 50831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 5053335 - 5053238
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| | |||  ||| || |||||||||||||||||||| |||  | ||||||||||||    
T  5053335 tctcaaaataattgtcactttaaaatatcaatgcaacatttatttt-tttccccattattatactcttatttattgaatctcatccaatttaactactc 5053238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 15675373 - 15675474
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    ||||||| |||||||||||||||  ||| ||| |||||||| ||||||| || ||||||| |||||||||| ||| | |||| |||||||||||||||||    
T  15675373 aaaataactgtcactttagaataccaatacaatatttatta-atttttctacgaatatacccttatttattaaatgtaactccatttaactactctacta 15675471  T
Q  174 act 176  Q
    |||    
T  15675472 act 15675474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 22772018 - 22771936
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||||||||||||||   ||| || || ||||| ||||||||||||||||||    
T  22772018 tctcaaaataattgtcactttagaataccaatgcaacatttattattacttttcattattatacccttatttattgaatttca 22771936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 39890676 - 39890754
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaactctaaa 299  Q
    ||||||||||||  ||||||||||| ||||||| |||| |||| |||||||||||||| ||| || |||||||||||||    
T  39890676 gttttagtaaatgctactaattttattattgaagtcaactcaactaatcatttctttaaaaatcgcgcacaactctaaa 39890754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 221 - 299
Target Start/End: Complemental strand, 44648593 - 44648516
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaactctaaa 299  Q
    |||||||||||| ||||||||||||| ||||||||||| | || ||||||||| |||| |||||||| |||||||||||    
T  44648593 gttttagtaaatgatactaattttaccattgaaatcaactaaactaatcattt-tttaaaaaccgtgtacaactctaaa 44648516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 29226708 - 29226605
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactcta 170  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||||||| || || | ||| |||||||||||||||||| ||| | |||||||||| |    
T  29226708 tcaaaataattgtcactttaaaatatcaatgcagcatttattatattttt-cattattgtacccttatttattgaatttca-tctaacttaactactcca 29226611  T
Q  171 ctaact 176  Q
    ||||||    
T  29226610 ctaact 29226605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 36007072 - 36006988
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattat--atttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |   ||||| ||||| ||| ||||||||||||||||||||    
T  36007072 tctcaaaataattgtcactttagaatactaatgcaacaattatttttatttttttcactattatgctcttatttattgaatttca 36006988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 1875916 - 1875840
Alignment:
Q  77 aataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||| ||||  ||||||||||||||||  ||||||||||| ||||| |||||||||| |||||||    
T  1875916 aataattgtcactttacaataccaatgcaacatttattacttttttccactagtatacccttatttattaaatttca 1875840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 42182107 - 42182016
Alignment:
Q  75 aaaataattgtcactttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactact 167  Q
    ||||||||||||  ||||||||| |||||||||||||| || | ||| ||| ||| ||| ||||||||||||||| |||| ||||||||||||    
T  42182107 aaaataattgtcgttttagaatacaatgcaacatttataat-tattttcaccaatgtacccttatttattgaattccactatatttaactact 42182016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 11977115 - 11977013
Alignment:
Q  75 aaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactctact 172  Q
    ||||||||||||| |||| |||| ||||| | |||||||||| ||||||| ||| |||||  ||||||||||||||||| ||| | ||||||||||||||    
T  11977115 aaaataattgtcattttacaatactaatgtagcatttattatttttttccgctattatacctttatttattgaatttca-tctaacttaactactctact 11977017  T
Q  173 aact 176  Q
    ||||    
T  11977016 aact 11977013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 39301140 - 39301057
Alignment:
Q  70 ctctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||| |||||||||| |||| | | ||||||||  ||||||| || |||||| |||||||||||||||||    
T  39301140 ctctcaaaataattgtcattttagaatatcaatgaatcgtttattattattttccattattatacttttatttattgaatttca 39301057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 36967307 - 36967388
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||| |||||||||||| ||||||  ||||||||| ||||| || || ||||| ||||||||||||||||||    
T  36967307 tctcaaaataattgttactttagaatatcaatgcataatttattat-ttttttcattattatacccttatttattgaatttca 36967388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 2767480 - 2767403
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaa 147  Q
    |||| |||||||||||||||||||||| |||| ||||||||||||  |||||||| ||  |||| |||||||||||||    
T  2767480 tctcgaaataattgtcactttagaatactaatacaacatttattacttttttccaatataatacccttatttattgaa 2767403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 7172883 - 7172944
Alignment:
Q  106 catttattatatttttccactaatatactcttatttattgaatttcactctatttaactact 167  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||||| || | |||||||||    
T  7172883 catttattatttttttccactattatacccttatttattgaatttcattcaacttaactact 7172944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 9300298 - 9300190
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttcc--actaatatactcttatttattgaatttcactctatttaactact 167  Q
    |||||||||||||||||||||| ||||  ||||||  ||||||||| | |||||  |||| ||||  |||||||||||||||||| || | |||||||||    
T  9300298 tctcaaaataattgtcactttacaataccaatgcagtatttattatttctttccccactattatatccttatttattgaatttcattcaacttaactact 9300199  T
Q  168 ctactaact 176  Q
    | |||||||    
T  9300198 ccactaact 9300190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 396790 - 396714
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    |||||||||||||||||||||||  |||||||||||||||||  |||| || || ||||| |||||| |||||||||    
T  396790 aaaataattgtcactttagaataccaatgcaacatttattattatttttcattattatacccttattaattgaattt 396714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 34394015 - 34393947
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgca 289  Q
    |||||||||||||||||||||||||| ||  |||||||  |||||||||||||| |||  |||||||||    
T  34394015 gttttagtaaattatactaattttaccatcaaaatcaacacaattaatcatttccttaataaccgtgca 34393947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 1875653 - 1875582
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||||  |||||||||||| |||||||||||  |||||||||||||| |||  || |||||||||    
T  1875653 gttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaa 1875582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 10180007 - 10179956
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||||||||||||||||| |||||||||||| ||| || ||||||    
T  10180007 ttttagtaaattatactaattttaccattgaaatcaatacaactactcattt 10179956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 39482545 - 39482654
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatat---actcttatttattgaatttcactctatttaactac 166  Q
    |||||||||||||||||||||| ||||  ||||||  ||||||||| |||| |||||| |||   || |||||||||||||||||| || | |||||||     
T  39482545 tctcaaaataattgtcactttacaataccaatgcagtatttattattttttcccactattattatacccttatttattgaatttcattccacttaactag 39482644  T
Q  167 tctactaact 176  Q
    || |||||||    
T  39482645 tccactaact 39482654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 44761675 - 44761571
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||| ||||  |||||| |||  ||||  ||||||||||| ||||| || |||||||||||||||  | | ||||||||||     
T  44761675 tctcaaaataattgtcactttacaataccaatgcagcat--attagttttttccactattataccctcatttattgaatttcatccaacttaactactcc 44761578  T
Q  170 actaact 176  Q
    |||||||    
T  44761577 actaact 44761571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 34948868 - 34948764
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||||| |||||||||||  ||||||| ||||||||| |||||| | |  ||||| ||||||||||||||||||  | | ||||||||||     
T  34948868 tctcaaaataattgttactttagaataccaatgcaatatttattatttttttc-attgttatac-cttatttattgaatttcatccaacttaactactcc 34948771  T
Q  170 actaact 176  Q
    |||||||    
T  34948770 actaact 34948764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 40028446 - 40028527
Alignment:
Q  73 tcaaaataattgtcactttagaatat--aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||| || | |||||  |||| |||||||||||| |||||||| || |||| |||| ||||||||||||||    
T  40028446 tcaaaataattgtcatttaataatattaaatgtaacatttattatttttttccagtattatattcttgtttattgaatttca 40028527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 7172969 - 7173026
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    ||||||||||||  |||||||||||  |||||||||||  ||||||||||||||||||    
T  7172969 gttttagtaaatgctactaattttatcattgaaatcaacacaattaatcatttcttta 7173026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 14855115 - 14855035
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatattttt--ccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||| ||||| ||||||| ||||||||| |||||  |||||| |||||  || ||||||||||||||    
T  14855115 aaaataattgtcactttacaatattaatgcaatatttattatttttttttccactattataccattctttattgaatttca 14855035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 44761555 - 44761502
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||||  |||||||||||| |||||||||||  ||||||||||||||    
T  44761555 gttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttc 44761502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 31331464 - 31331516
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| ||| ||||||||  |||||||||||| ||||||||||||||    
T  31331464 ttttagtaaataataataattttataattgaaatcaatacaattaatcatttc 31331516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 39482670 - 39482722
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||||| ||||||||||||  ||||||||||  |||||||||||||    
T  39482670 gttttagtaaattctactaattttacccttgaaatcaacacaattaatcattt 39482722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 42887056 - 42887104
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatca 270  Q
    ||||||||||| ||||||||||| |||||||||||||  ||||||||||    
T  42887056 ttttagtaaatgatactaattttgctattgaaatcaacacaattaatca 42887104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 309
Target Start/End: Complemental strand, 17719318 - 17719231
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaactctaaatcgaatatta 309  Q
    ||||||||||| ||||||| ||||| ||| |||||| | ||||||||||||| ||||  || ||||||||| ||| || ||| |||||    
T  17719318 ttttagtaaataatactaactttaccattaaaatcattacaattaatcatttttttaataatcgtgcacaaatcttaaacgactatta 17719231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 34948742 - 34948695
Alignment:
Q  227 gtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||| ||||||||||||||||| |||||||  ||||||||||||||    
T  34948742 gtaaatgatactaattttactatttaaatcaacacaattaatcatttc 34948695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 41091930 - 41092007
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatt 149  Q
    |||||| ||||||| || |||||||||| |||||| |||||||| |||||||| |||| ||||| |||||||||||||||    
T  41091930 tctcaacataattgccaatttagaatatcaatgcagcatttatt-tatttttc-actattatacccttatttattgaatt 41092007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 4924214 - 4924144
Alignment:
Q  107 atttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    ||||||||| |||||| ||||||||||| |||||||||| | ||||| || | |||||||||||| |||||    
T  4924214 atttattattattttttcactaatatacccttatttattaagtttcattcaacttaactactctattaact 4924144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 21649544 - 21649438
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatattt--ttccactaatatactcttatttattgaatttcactctatttaactact 167  Q
    |||||||||||||   ||||||||||| ||||||| |||||||| | |||  |||||| | ||||   ||||||||||||||||| || |||||||||||    
T  21649544 tctcaaaataattt--actttagaatagtaatgcaccatttattttttttctttccacaattatatcattatttattgaatttcattcaatttaactact 21649447  T
Q  168 ctactaact 176  Q
    | |||||||    
T  21649446 caactaact 21649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 31231667 - 31231769
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    ||||||||||||| |||| ||||  |||||| |||||||||| |||||||| ||  |||| ||||||||||||| || |  | | |||||||||| ||||    
T  31231667 aaaataattgtcattttataataccaatgcatcatttattatttttttccattataatacccttatttattgaactttatccaacttaactactccacta 31231766  T
Q  174 act 176  Q
    |||    
T  31231767 act 31231769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 41092050 - 41092120
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||| ||||| ||| ||||||||| |||||||||||  ||||||||| |||||||| ||| ||| |||||    
T  41092050 ttttaataaatgatattaattttaccattgaaatcaacacaattaatcgtttctttaaaaatcgttcacaa 41092120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 21216162 - 21216109
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||||   ||||||||||| |||||||||||  ||||||||||||||    
T  21216162 gttttagtaaatgcaactaattttaccattgaaatcaacacaattaatcatttc 21216109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 34394137 - 34394064
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaa 147  Q
    |||||||||||||||||| ||||  ||||||  ||||||||  |||||||| ||  ||||||||||||||||||    
T  34394137 aaaataattgtcactttaaaataccaatgcataatttattaactttttccattacaatactcttatttattgaa 34394064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 35505050 - 35504974
Alignment:
Q  74 caaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    ||||||||||  |||||| ||||| | ||| || ||||||||| |||||| |||| ||||||||||||||||||||||    
T  35505050 caaaataattaacacttttgaatactgatgtaatatttattatttttttc-actattatactcttatttattgaattt 35504974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 7703216 - 7703164
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| ||| ||||||||| |||||||||||  |||||||| |||||    
T  7703216 ttttagtaaatgatattaattttaccattgaaatcaacacaattaattatttc 7703164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 17654530 - 17654578
Alignment:
Q  104 aacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||  ||||||||||| |||| ||||||||||| ||||||    
T  17654530 aacatttattattcttttccactaacatacccttatttattgtatttca 17654578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 21216279 - 21216178
Alignment:
Q  75 aaaataattgtcactttagaata-taatgcaacattta-ttatatttttccactaatatactcttatttattgaatttcactctatttaactactctact 172  Q
    |||||||||||||||||| ||||  ||||||||||||| |||| |||||| |||| |||||  |  ||||||||||||||  | | |||||||||| |||    
T  21216279 aaaataattgtcactttacaataccaatgcaacatttatttatttttttctactattataccat--tttattgaatttcatccaacttaactactccact 21216182  T
Q  173 aact 176  Q
    ||||    
T  21216181 aact 21216178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 39301001 - 39300945
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    ||||||||||| ||| ||||||||| || ||||||||   |||||||||||||||||    
T  39301001 ttttagtaaatgatattaattttaccatcgaaatcaacataattaatcatttcttta 39300945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 39466220 - 39466141
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    ||||||||||||| |||||||| ||||   || ||||||||||||| ||||| ||||| ||||  ||||||||||||||||    
T  39466220 tctcaaaataattatcactttacaataccgatacaacatttattat-ttttttcactattatatccttatttattgaattt 39466141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 39890614 - 39890646
Alignment:
Q  117 tttttccactaatatactcttatttattgaatt 149  Q
    |||||||||||||||||| ||||||||||||||    
T  39890614 tttttccactaatatacttttatttattgaatt 39890646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 37506057 - 37506163
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||  |||| |||||||||||||||||| || | ||||||||||     
T  37506057 tctcaaaataattgtcactttagaatatcaatgcaacatttattatttttttccattataatacccttatttattgaatttcattcaacttaactactcc 37506156  T
Q  170 actaact 176  Q
    |||||||    
T  37506157 actaact 37506163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 39864045 - 39864150
Alignment:
Q  72 ctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactcta 170  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||  | | |||||||||| |    
T  39864045 ctcaaaataattgtcactttacaatatcaatgcaacatttattatttttttccactattatacccttatttattgaatttcatccaacttaactactcca 39864144  T
Q  171 ctaact 176  Q
    ||||||    
T  39864145 ctaact 39864150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 7759150 - 7759254
Alignment:
Q  73 tcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 171  Q
    |||||||||||||||||||| |||| ||||||| |||||||||| |||||||| || ||||| |||||||||||||||||| || | ||||||| || ||    
T  7759150 tcaaaataattgtcactttacaataataatgcatcatttattatttttttccattattatacccttatttattgaatttcattcaacttaactattccac 7759249  T
Q  172 taact 176  Q
    |||||    
T  7759250 taact 7759254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 12039015 - 12039094
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatt 149  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||  |||||||||| ||||| |||||||||||||||    
T  12039015 tctcaaaataattgtcactttacaatactaatgcaacatttattattattttccactattatacccttatttattgaatt 12039094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 6785189 - 6785271
Alignment:
Q  71 tctcaaaataattgtcactttagaatata-atgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||   |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  6785189 tctcaaaataattgtcactttacaatacctatgcaacatttattatttttttccactattatacccttatttattgaatttca 6785271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 33733447 - 33733341
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||  |||| | ||||||||||  ||||||| || ||||| |||||||||||||||||| ||||  |||| |||||    
T  33733447 tctcaaaataattgtcactttagaataccaatgaagcatttattattcttttccattattatacccttatttattgaatttcattctacctaaccactct 33733348  T
Q  170 actaact 176  Q
    |||||||    
T  33733347 actaact 33733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 49224171 - 49224065
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||  |||| ||||||||||||| ||||  | | ||||||||||     
T  49224171 tctcaaaataattgtcactttagaatactaatgcaacatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactcc 49224072  T
Q  170 actaact 176  Q
    |||||||    
T  49224071 actaact 49224065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 23169176 - 23169095
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcac 153  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||   |||||||||| |||||||||||||||||||||||||    
T  23169176 tctcaaaataattgtcactttacaataccaatgcaacatttattac--ttttccactattatactcttatttattgaatttcac 23169095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 24991839 - 24991756
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||| |||||| |||||  |||||||||||||||||    
T  24991839 tctcaaaataattgtcactttacaatactaatgcaacatttattatttttttcccactattatacctttatttattgaatttca 24991756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 35682979 - 35682897
Alignment:
Q  70 ctctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||| || |||||||||| ||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  35682979 ctctcaaaataattgccaatttagaatatcaatgcaatatttattat-tttttccactattatacccttatttattgaatttca 35682897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 26093327 - 26093409
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||| |||||||||||||| ||| ||||| ||||||||||||||||||||| || ||||| ||||||||||||| ||||    
T  26093327 tctcaaaacaattgtcactttagtatactaatgtaacatttattatatttttccattattatacccttatttattgaacttca 26093409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 40145030 - 40144950
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| ||| ||  |||| ||||||||||||| ||||    
T  40145030 tcaaaataattgtcactttagaatatcaatgcaacatttattattttttcccattataatacccttatttattgaacttca 40144950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 4659710 - 4659815
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||| ||||  |||||||||||  |||| ||||||||||| ||||  |||||||||||||||||| || | |||| |||||     
T  4659710 tctcaaaataattgtcactttacaataccaatgcaacattatttat-tttttccactattatatccttatttattgaatttcattcaacttaattactcc 4659808  T
Q  170 actaact 176  Q
    |||||||    
T  4659809 actaact 4659815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 17988930 - 17988856
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttatt 144  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||| | ||||||||| ||||||| ||||||||    
T  17988930 tctcaaaataattgtcattttaaaatattaatgcaacatttattatttctttccactattatactcatatttatt 17988856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 20210025 - 20209919
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| |||| ||| ||  |||| ||||||||||||| ||||  | | ||||||||||     
T  20210025 tctcaaaataattgtcactttagaataccaatgcagcatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactcc 20209926  T
Q  170 actaact 176  Q
    |||||||    
T  20209925 actaact 20209919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 27721470 - 27721571
Alignment:
Q  75 aaaataattgtcactttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    |||||||||| ||||||| |||| || |||| |||||||||| ||||||||||| |||||| ||||||||||||||| |  | ||||||||| |||||||    
T  27721470 aaaataattgccactttacaatacaaatgcatcatttattat-tttttccactattatacttttatttattgaattttatccaatttaactattctacta 27721568  T
Q  174 act 176  Q
    |||    
T  27721569 act 27721571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 31042730 - 31042812
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||| ||| || |||||||||| |||||||||||  |||   |||||||||||||||||    
T  31042730 tctcaaaataattgtcactttagaatatcaatacatcatttattatttttttccactatgatatctttatttattgaatttca 31042812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 34031708 - 34031630
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||  |||||| ||| |||||| |||||||||| |||||||| || ||||||||||||||||||||||||    
T  34031708 aaaataattgtcgttttagactatcaatgcagcatttattatgtttttccattattatactcttatttattgaatttca 34031630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 52429279 - 52429383
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatattttt--ccactaatatactcttatttattgaatttcactctatttaactactctac 171  Q
    |||||||||||||||||| ||||| ||||||||||||||||| |||||   || || ||||| |||||||| ||||||||| || | |||||||||| ||    
T  52429279 aaaataattgtcactttacaatatcaatgcaacatttattattttttttctcattattatacccttatttaatgaatttcattcaacttaactactccac 52429378  T
Q  172 taact 176  Q
    |||||    
T  52429379 taact 52429383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 29074817 - 29074884
Alignment:
Q  75 aaaataattgtcactttagaatataa-tgcaacatttattatatttttccactaatatactcttattta 142  Q
    |||||||||||||||||| |||| || | ||||||||||| ||||||||||||||||||||||||||||    
T  29074817 aaaataattgtcactttataatacaaatacaacatttatt-tatttttccactaatatactcttattta 29074884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 40261108 - 40261236
Alignment:
Q  24 tactctattcgtctcaaaataacagtctctttagcagtannnnnnnctctcaaaataattgtcactttagaata-taatgcaacatttattatatttttc 122  Q
    |||||||||||||| ||||||||||||||||||||||||       | ||||||||||||||||||||| |||| ||||  ||  |||||||| |||||     
T  40261108 tactctattcgtcttaaaataacagtctctttagcagtatttttttc-ctcaaaataattgtcactttaaaatattaatataatttttattatttttttt 40261206  T
Q  123 cactaatatactcttatttattgaatttca 152  Q
    || || ||||   |||||||||||||||||    
T  40261207 cattattatatctttatttattgaatttca 40261236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 35367735 - 35367841
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactc 168  Q
    |||||||||||||||||||||| ||||  |||| |||||||||||   |||| ||||| ||||| |||||||||||||||||| ||| | ||||||||||    
T  35367735 tctcaaaataattgtcactttacaataccaatgaaacatttattagtctttttcactattatacccttatttattgaatttca-tctaacttaactactc 35367833  T
Q  169 tactaact 176  Q
     |||||||    
T  35367834 cactaact 35367841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 38787271 - 38787380
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatattttt---ccactaatatactcttatttattgaatttcactctatttaactac 166  Q
    ||||||||||||||||||||||||| |  ||||||| ||||||| | |||||   ||| || ||||| ||||||||||||||||||  | ||||||||||    
T  38787271 tctcaaaataattgtcactttagaaaagcaatgcaaaatttattttttttttttcccattattatacccttatttattgaatttcatccaatttaactac 38787370  T
Q  167 tctactaact 176  Q
    || |||||||    
T  38787371 tccactaact 38787380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 3312056 - 3312126
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttatt 144  Q
    |||||||||||||||||| ||||| ||| |||||||||||||  | |||||||| ||||||||||||||||    
T  3312056 aaaataattgtcactttataatatcaatacaacatttattattatattccactattatactcttatttatt 3312126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 37177769 - 37177875
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||||||| |||||||| | |||| |||| |||||||  |||| ||||| |||||||||||||||| ||||| |  | | ||||||||| |    
T  37177769 tctcaaaataattgtcattttagaatgtcaatgtaacacttattattatttttcactattatactcttatttatttaattttatccaacttaactactat 37177868  T
Q  170 actaact 176  Q
    |||||||    
T  37177869 actaact 37177875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 2981924 - 2981827
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaactctaaatcgaatattaaaataagat 318  Q
    ||||||||| |||||||||||||| ||||||||||||| | || |||| ||||  ||  |||  ||||||||||||||| ||| ||||||||| ||||    
T  2981924 gttttagtagattatactaatttttctattgaaatcaacttaactaattattttatttaaaaatgtgcacaactctaaaacgactattaaaatgagat 2981827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 22856417 - 22856340
Alignment:
Q  76 aaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||  |||||| ||||| ||| ||||||||||||| ||||| ||||| |||||| |||||||||||||||||    
T  22856417 aaataattgcaactttaaaatatcaattcaacatttattatttttttgcactattatacttttatttattgaatttca 22856340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 26258002 - 26257946
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    ||||||||||| ||| | ||||| |||||||||||||| ||||||||||||||||||    
T  26258002 ttttagtaaatgataatcattttgctattgaaatcaatacaattaatcatttcttta 26257946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 2572405 - 2572508
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttatt-atatttttccactaatatactcttatttattgaatttcactctatttaactactctact 172  Q
    |||| ||||| ||||||| ||||| ||||||| ||||||| || |||||||| || |||| | ||||||||||||||||| || | |||||||||| |||    
T  2572405 aaaacaattgccactttaaaatatcaatgcaatatttatttatttttttccattattatatttttatttattgaatttcattcaacttaactactccact 2572504  T
Q  173 aact 176  Q
    ||||    
T  2572505 aact 2572508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 28749046 - 28749117
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||||  |||||||||||| |||||||||||  |||||||||||||| |||  || |||||||||    
T  28749046 gttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaa 28749117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 36701856 - 36701936
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||| ||||||||||||| |||||||| |||||| || || ||||  ||||||| || ||||||||||||||||||||||||    
T  36701856 tctcataataattgtcactgtagaatatcaatgcatcacttgttat--ttttccattattatactcttatttattgaatttca 36701936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 36717960 - 36718040
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||| ||||||||||||| |||||||| |||||| || || ||||  ||||||| || ||||||||||||||||||||||||    
T  36717960 tctcataataattgtcactgtagaatatcaatgcatcacttgttat--ttttccattattatactcttatttattgaatttca 36718040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 43500925 - 43500854
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttattt 141  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||| || || || |||||||    
T  43500925 tctcaaaataattgtcactttagaatactaatgcagcatttattattattttccattattacacccttattt 43500854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 10588000 - 10587946
Alignment:
Q  98 taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||| |||||||||||||  |||| ||||||||||||||||||||||| ||||||    
T  10588000 taatacaacatttattattctttttcactaatatactcttatttattgcatttca 10587946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 11449824 - 11449924
Alignment:
Q  75 aaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    |||||| |||||||||||||||| ||||||||||||| || | | |||||| || ||||| ||||||||||||||||||  | |||| ||||||||| ||    
T  11449824 aaaatagttgtcactttagaatactaatgcaacatttttttt-tctttccattattatac-cttatttattgaatttcatccaattttactactctatta 11449921  T
Q  174 act 176  Q
    |||    
T  11449922 act 11449924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 39864167 - 39864237
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||||||||||  |||||||||||| |||||||||||  |||||||||||||| |||  || |||||||||    
T  39864167 ttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaa 39864237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 2572525 - 2572574
Alignment:
Q  223 tttagtaaattatactaattttactattgaaatcaattcaattaatcatt 272  Q
    |||||||||| ||| ||||||||| |||||||||||| ||||||||||||    
T  2572525 tttagtaaatgatattaattttaccattgaaatcaatacaattaatcatt 2572574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 7351572 - 7351649
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||   |||||| || || ||||||||||||||||||||||    
T  7351572 tctcaaaataattgtcattttagaatactaatgcaac-tttat--cattttttcattattatactcttatttattgaattt 7351649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 26252646 - 26252562
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttc--cactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||| |||| ||| | || |||||||||||| |||||||   || |||||||| ||||||||||||||||||    
T  26252646 tctcaaaataattgtcattttacaatttcaaagcaacatttattttattttttttcattaatatacccttatttattgaatttca 26252562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 41122008 - 41121939
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttat 139  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||| ||||| || || ||||| |||||    
T  41122008 tctcaaaataattgtcactttaaaatatcaatacaacatttattattttttttcattattatacccttat 41121939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 44426891 - 44426838
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttcc 123  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||    
T  44426891 tctcaaaattattgtcactttagaatataaatacaacatttattatttttttcc 44426838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 12039140 - 12039208
Alignment:
Q  224 ttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||||||||  |||||||||||| |||||||||||  |||||||||||||| |||  || |||||||||    
T  12039140 ttagtaaatgttactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaa 12039208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 22181391 - 22181459
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgca 289  Q
    |||||||||||| ||| ||||||||| |||||||| || |||| |||||||||| |||  |||||||||    
T  22181391 gttttagtaaatgatattaattttaccattgaaatgaactcaactaatcatttccttaataaccgtgca 22181459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 28748926 - 28749006
Alignment:
Q  73 tcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||| |||||||| ||||  |||||| |||||||||| |||| |||||| ||||| |||||||||  |||||||    
T  28748926 tcaaaataattatcactttataatagcaatgcagcatttattattttttcccactattatacccttatttataaaatttca 28749006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 31042857 - 31042905
Alignment:
Q  226 agtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||| ||||||||||||| |||||||||||  ||||||||||||||    
T  31042857 agtaaatgatactaattttaccattgaaatcaacacaattaatcatttc 31042905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 36701977 - 36702029
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| ||||||||||||| |||||||||||   |||||||||||||    
T  36701977 ttttagtaaatgatactaattttaccattgaaatcaacataattaatcatttc 36702029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 36718081 - 36718133
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| ||||||||||||| |||||||||||   |||||||||||||    
T  36718081 ttttagtaaatgatactaattttaccattgaaatcaacataattaatcatttc 36718133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 49224049 - 49223981
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgca 289  Q
    |||||||||||| ||||||||||||| ||  |||||||  |||||||||||||  |||| |||||||||    
T  49224049 gttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttagtaaccgtgca 49223981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 6160521 - 6160470
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||| ||||||||||||  |||||||||||  |||||||||||||    
T  6160521 ttttagtaaataatactaattttatcattgaaatcaacacaattaatcattt 6160470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 16395109 - 16395058
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||| ||||||||||||||||  |||||||  |||||||||||||    
T  16395109 ttttagtaaatgatactaattttactatcaaaatcaacacaattaatcattt 16395058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 5179460 - 5179410
Alignment:
Q  223 tttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||||||| ||||| ||||| |||||||||||||  |||||||||||||    
T  5179460 tttagtaaatgatactcattttgctattgaaatcaacacaattaatcattt 5179410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 6160635 - 6160593
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttat 112  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  6160635 tctcaaaataattgtcattttagaatatcaatgcaacatttat 6160593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 9379169 - 9379246
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||| |||||||||| ||||||| ||||||| |||||||||| || |||||   |||||||| |||||||    
T  9379169 aaaataattgtcattttagaatatcaatgcaatatttatt-tatttttccattattatacctatatttattaaatttca 9379246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 14757778 - 14757697
Alignment:
Q  71 tctcaaaataattgtcactttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||| ||||| |||| || ||||  |||||| || ||||||||||| ||||| |||||||||| |||||||    
T  14757778 tctcaaaataattgtc-ctttacaatacaaatgcagaatttataatttttttccactattatacccttatttattaaatttca 14757697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 15699072 - 15699114
Alignment:
Q  70 ctctcaaaataattgtcactttagaatat-aatgcaacattta 111  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  15699072 ctctcaaaataattgtcactttagaatatcaatgcagcattta 15699114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 26256273 - 26256167
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||| ||||||| ||||  |||| | |||||||||  | ||||||||| |||| |||| |||||||| |||||  | | |||||||||||    
T  26256273 tctcaaaataattgccactttataataccaatgtatcatttattaattctttccactattatattcttctttattgactttcatccaacttaactactct 26256174  T
Q  170 actaact 176  Q
    | |||||    
T  26256173 attaact 26256167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 35432250 - 35432180
Alignment:
Q  83 tgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||  |||| |||||| ||||  | ||||||||||||||| ||||||||||| ||||||    
T  35432250 tgtcactttagaataccaatgaaacattgattacttgtttccactaatatacccttatttattgtatttca 35432180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 37275536 - 37275574
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacattt 110  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  37275536 tcaaaataattgtcactttagaatatcaatgcaacattt 37275574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 44707823 - 44707769
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttct 275  Q
    ||||||||||||  |||||||||||  ||||||||||||  ||||||||||||||    
T  44707823 gttttagtaaatactactaattttatcattgaaatcaatataattaatcatttct 44707769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 916967 - 917063
Alignment:
Q  78 ataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    |||||||| |||||||||||| |||||| ||||||||   |||||||| || | ||| |||||||||| |||||||  | | ||||||| ||||||||||    
T  916967 ataattgttactttagaatatcaatgcagcatttatt---tttttccattattttacccttatttattaaatttcatgcaacttaactaatctactaact 917063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 37539097 - 37539166
Alignment:
Q  107 atttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    |||||| || |||||||||||  |||| ||||||||||||||||||    | ||||||||||||||||||    
T  37539097 atttataatttttttccactatgatacccttatttattgaatttcatcaaacttaactactctactaact 37539166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 39395279 - 39395230
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||  |||| |||||||||||||||| |||||| ||||||    
T  39395279 caacatttattattctttttcactaatatactcttacttattgcatttca 39395230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 39887769 - 39887850
Alignment:
Q  73 tcaaaataattgtcactttagaata-taatgcaacatttattatatttttc-cactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||| |||| || ||||| |||| |||| |||||| ||||  |||||  |||||||||||||||||    
T  39887769 tcaaaataattgtcactttaaaatattagtgcaatatttgttatttttttctcactgttatacatttatttattgaatttca 39887850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 44707916 - 44707863
Alignment:
Q  99 aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||| ||||||||| | ||||||||| |||||  |||||||||||||||||    
T  44707916 aatgcaatatttattatttgtttccactattatacctttatttattgaatttca 44707863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 45118671 - 45118642
Alignment:
Q  130 atactcttatttattgaatttcactctatt 159  Q
    ||||||||||||||||||||||||||||||    
T  45118671 atactcttatttattgaatttcactctatt 45118642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 11642135 - 11642183
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttattgaatttc 151  Q
    |||||||||||||  ||||||||||||||||  |||||||||| |||||    
T  11642135 caacatttattattcttttccactaatatacaattatttattgtatttc 11642183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 15778048 - 15778127
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    ||||||||||||| || ||||| ||||| ||| || |||||||||| |||||| | || |||||||| |||||||||||||    
T  15778048 tctcaaaataattatccctttataatatcaatacaccatttattatttttttc-attattatactctgatttattgaattt 15778127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 20209903 - 20209851
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||||||||| ||||||||||||||||  |||||||   ||||||||||||    
T  20209903 gttttagtaaatgatactaattttactatcaaaatcaacataattaatcattt 20209851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 23169056 - 23169004
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||||  |||||||||||| |||||||||||  |||||||| ||||    
T  23169056 gttttagtaaatgctactaattttaccattgaaatcaacacaattaattattt 23169004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 24880809 - 24880888
Alignment:
Q  75 aaaataattgtcactttagaatataatgcaacatttatta--tatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||  ||| | |||||||||  | |||||||| || ||||  || |||||||||||||||    
T  24880809 aaaataattgtcactttagaataccatgtagcatttattatttctttttccattattatatcctaatttattgaatttca 24880888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 41121887 - 41121835
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||||| |||||||||| ||  |||||||  ||||||||||||||    
T  41121887 ttttagtaaattatgctaattttaccatcaaaatcaacacaattaatcatttc 41121835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 44301494 - 44301599
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttatta-tatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  | | ||||||||||    
T  44301494 tctcaaaataattgtcactttataatatcaatgcaacatttattaatatttttccactattatactcttatttattgaatttcatccaacttaactactc 44301593  T
Q  169 tactaa 174  Q
     |||||    
T  44301594 cactaa 44301599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 37311886 - 37311989
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactctact 172  Q
    |||||||||||||||||| ||||| |||||| |||||||||| ||||||| | || |||||||||||||||||||||||| |  |||||||||||| |||    
T  37311886 aaaataattgtcactttacaatatcaatgcagcatttattattatttttctattattatactcttatttattgaatttcattaaatttaactactccact 37311985  T
Q  173 aact 176  Q
    ||||    
T  37311986 aact 37311989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 10366831 - 10366749
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||| ||| || ||||| ||||||||||||||||||    
T  10366831 tctcaaaataattgtcactttagaataccaatgcaacatttattattttttcccattattatacccttatttattgaatttca 10366749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 51838142 - 51838038
Alignment:
Q  71 tctcaaaataattgtcactttagaat-ataatgcaacatttattatattttt-ccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| |||||||| ||||||||| || |  |||||||||    
T  51838142 tctcaaaataattgtcactttacaattataatgcaacatttattattttttttccactattatacccttatttaatgaatttcattcaacgtaactactc 51838043  T
Q  169 tacta 173  Q
     ||||    
T  51838042 cacta 51838038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 43254046 - 43253939
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttatta-tatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||||||||||||||||||| ||||  |||||||||||||||| | ||||||||||| ||||| |||||||| |||||||||  | | ||||||||||    
T  43254046 tctcaaaataattgtcactttacaataccaatgcaacatttattagtttttttccactattatacccttatttaatgaatttcatcccacttaactactc 43253947  T
Q  169 tactaact 176  Q
     |||||||    
T  43253946 cactaact 43253939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 53560149 - 53560256
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacattta-ttatatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    ||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||| ||  | || ||||||||||||| |||| || | ||||||||||    
T  53560149 tctcaaaataattgtcactttagaatactaatgcagcatttatttatttttttccattataacacccttatttattgaacttcattcaacttaactactc 53560248  T
Q  169 tactaact 176  Q
    ||||||||    
T  53560249 tactaact 53560256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 36460598 - 36460516
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||||||  |||| ||||||| ||||||||| | ||||||||| ||||| ||||||||||||||||||    
T  36460598 tctcaaaataattgtcactttacgatatcaatgcaatatttattatttgtttccactattatacccttatttattgaatttca 36460516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 36476517 - 36476623
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||  |||||| |||||||||  |||||| | || ||||| ||||||||||||||||||    | |||||||||||    
T  36476517 tctcaaaataattgtcactttagaataccaatgcagcatttattacttttttctattattatacccttatttattgaatttcatcaaacttaactactct 36476616  T
Q  170 actaact 176  Q
    |||||||    
T  36476617 actaact 36476623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 39043932 - 39043833
Alignment:
Q  76 aaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaa 174  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||  || || ||||| |||||||||||||||||| || | |||||||||| |||||    
T  39043932 aaataattgtcactttagaataccaatgcaacatttattatttttt--cattattatacccttatttattgaatttcattcaacttaactactccactaa 39043835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 43715239 - 43715307
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactctta 138  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| |||||||| || ||||||||||    
T  43715239 tctcaaaataattgtcactttagaatatcaatgtaacatttattatttttttccattattatactctta 43715307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 30711007 - 30711088
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||| |||||||||| |||||||||| ||| ||||||||||||| |||||| |||| |||| |||||||||||||||||||    
T  30711007 tctcaacataattgtcattttagaatatcaatacaacatttattatttttttc-actattataatcttatttattgaatttca 30711088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 37497423 - 37497531
Alignment:
Q  70 ctctcaaaataattgtcactttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaatttcactctatttaactact 167  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||| ||||||| || || |||||  |||||||||||||||||  | | |||||||||    
T  37497423 ctctcaaaataattgtcactttataataccaatacaacatttattattattttttcattattatacgtttatttattgaatttcatccaacttaactact 37497522  T
Q  168 ctactaact 176  Q
    | |||||||    
T  37497523 ccactaact 37497531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 9022578 - 9022660
Alignment:
Q  71 tctcaaaataattgtcactttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcact 154  Q
    ||||| |||||||||||| ||| |||||||  |||||||||||| |||||| ||  |||||| |||||||||||||||||||||    
T  9022578 tctcataataattgtcaccttataatataacacaacatttatta-attttttcatcaatatattcttatttattgaatttcact 9022660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 19822944 - 19823026
Alignment:
Q  71 tctcaaaataattgtcacttt-agaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||||| ||||||  |||||| |||||||||| |||||| | |||||||| ||||||||||||||||||    
T  19822944 tctcaaaataattgtcacttttagaataccaatgcagcatttattatttttttc-attaatatacccttatttattgaatttca 19823026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 27471268 - 27471371
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||| ||||  ||| || |||||||||| ||| |||||||  ||||  ||||||||||||||||| || | ||||||||||     
T  27471268 tctcaaaataattgtcactttataataccaatacagcatttattatttttgtccactaccatacctttatttattgaatttcattcaacttaactactcc 27471367  T
Q  170 acta 173  Q
    ||||    
T  27471368 acta 27471371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 3901331 - 3901249
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||| ||| | |||||  |||| |||||||||||| |||||||| || ||||| ||||||||||||||||||    
T  3901331 tctcaaaataattgttactcttgaataccaatgtaacatttattatttttttccattattatacccttatttattgaatttca 3901249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 30190719 - 30190649
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||||||||| ||   ||||||||||||    
T  30190719 ttttagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttcataaccgtgcacaa 30190649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 30190842 - 30190736
Alignment:
Q  71 tctcaaaataattgtcactttagaat-ataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||| | |||| ||||||||||||   |||||| || | ||| |||||| |||||||||||  | | ||||||||||     
T  30190842 tctcaaaataattgtcactttagaataaaaatgtaacatttattattaatttccattattttacccttattaattgaatttcatccaacttaactactcc 30190743  T
Q  170 actaact 176  Q
    |||||||    
T  30190742 actaact 30190736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 37804671 - 37804740
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatt 140  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| |||||||| |||| |||| |||||||    
T  37804671 tctcaaaataattgtccctttagaatatcaatgcaacatttatt-tatttttctactattatattcttatt 37804740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 25108706 - 25108610
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactact 167  Q
    |||||| |||| ||| |||||| ||||| |||  || ||||||| ||||||| |||||||||| | ||||||||||||||||| ||||||||||||||    
T  25108706 tctcaatataaatgttactttaaaatatcaatataatatttatt-tattttttcactaatatatttttatttattgaatttcattctatttaactact 25108610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 30710582 - 30710627
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattat 115  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  30710582 tctcaaaataattgtcactttagaatatcaatgcaacatttattat 30710627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 176
Target Start/End: Complemental strand, 37695837 - 37695742
Alignment:
Q  83 tgtcactttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttcactct-atttaactactctactaact 176  Q
    |||||||||||||||  ||||||||||||||||| ||||| ||| || ||||| |||||||||||||||||| ||| | |||||||||| |||||||    
T  37695837 tgtcactttagaataccaatgcaacatttattattttttttccattattatacccttatttattgaatttca-tctaacttaactactccactaact 37695742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 38137626 - 38137546
Alignment:
Q  73 tcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||  |||| |||||||| |||||||||  |||||||||| ||||   |||||||||||||||||    
T  38137626 tcaaaataattgtcactttgcaatactaatgcaatatttattattattttccactattatatctttatttattgaatttca 38137546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 27549464 - 27549361
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttcactctatttaactactctact 172  Q
    ||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||| ||||   ||||||||||||||| | |  |||||||||| | |||    
T  27549464 aaaataactgtcactttacaatatcaatgcaacatttattatttttttcccactattataactttatttattgaatttaatttaatttaactacgccact 27549365  T
Q  173 aact 176  Q
    ||||    
T  27549364 aact 27549361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 37695726 - 37695655
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||||||||||| ||| ||||||||| |||||||||||  |||||||||||||| |||  || |||||||||    
T  37695726 gttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaa 37695655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 42469861 - 42469784
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatt 149  Q
    |||||||||||||||||||||| ||||| |||| |||||||| | |||||||  | ||||||||||||||||||||||||    
T  42469861 tctcaaaataattgtcactttaaaatattaatgtaacatttact-tattttta-attaatatactcttatttattgaatt 42469784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 43253923 - 43253852
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||||  |||||||||||| |||||||||||  |||||||||||||| |||  || |||||||||    
T  43253923 gttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaa 43253852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 49830185 - 49830236
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  49830185 ttttagtaaatgatattaattttactattgaaatcaacacaattaatcattt 49830236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 3313187 - 3313269
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttatta-tatt-tttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||| ||||| |||||| ||||||||| |||| ||| || || |||| |||||||||||||||||||    
T  3313187 tcaaaataattgtcactttacaatataaatgcagcatttattattattattttcattattataatcttatttattgaatttca 3313269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 12904797 - 12904879
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||| | |||| |||| ||||| | | |||||| | ||||||||||| ||||| ||||||||||||||||||    
T  12904797 tctcaaaataattgttaatttataatactaatggagcttttattttttttttccactattatacccttatttattgaatttca 12904879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 14194611 - 14194681
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||||||||||  |||||||||||  |||||||||||  ||||| |||||||||||| ||| |||||||||    
T  14194611 ttttagtaaatggtactaattttatcattgaaatcaacacaattgatcatttctttaaaaatcgtgcacaa 14194681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 17652686 - 17652767
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||||||||||| |||||||  |||||| || |||||| | || ||||| |||||||||| |||||||    
T  17652686 tctcaaaataattgtcactttagaatattaatgcagtatttataat-tttttcaattattatacccttatttattaaatttca 17652767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 28690841 - 28690771
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||| |||||||||  ||||||||||  ||||||||||||||||||  || |||||||||    
T  28690841 ttttagtaaatgatattaattttaccgttgaaatcaacacaattaatcatttctttaataatcgtgcacaa 28690771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 33458982 - 33459086
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||| ||| ||||||| |||  ||||||||| | ||||||| || |||||| || |||    
T  33458982 tctcaaaataattgtcattttagattatcaatacaacatttattat-tttgtccactattat-gtcttatttaataaatttcattcaatttaagtattct 33459079  T
Q  170 actaact 176  Q
    |||||||    
T  33459080 actaact 33459086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 37773148 - 37773051
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacattta--ttatatttttccactaatatactcttatttattgaatttcactctatttaacta 165  Q
    |||||||||||||||||||||| ||||  |||||| ||||||  |||| |||||||| || ||||| |||||||| ||||||||| || | |||||||    
T  37773148 tctcaaaataattgtcactttacaataccaatgcagcatttattttatttttttccattattatacccttatttaatgaatttcattcaacttaacta 37773051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 8679206 - 8679154
Alignment:
Q  99 aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||| |||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  8679206 aatgcatcatttattat-tttttccactattatacccttatttattgaatttca 8679154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 42278720 - 42278773
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||| ||  ||||||||| |||||||||||||||| ||||||||||    
T  42278720 gttttagtaaatgatgttaattttacgattgaaatcaattcaactaatcatttc 42278773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 8679113 - 8679061
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||  |||||||||||| |||||||||||  ||||||||||||||    
T  8679113 ttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttc 8679061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 10366702 - 10366650
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||| ||||| ||||||||||||| |||||||||||  |||||||||||||    
T  10366702 gttttaataaatgatactaattttaccattgaaatcaacacaattaatcattt 10366650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 37312006 - 37312058
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||  |||||||||||| |||||||||||  ||||||||||||||    
T  37312006 ttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttc 37312058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 37773023 - 37772971
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| ||| ||||||||| |||| ||||||| ||||||||||||||    
T  37773023 ttttagtaaatgatattaattttaccattgtaatcaatacaattaatcatttc 37772971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 52206906 - 52206854
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| ||| ||||||||| ||||||||||||| || ||||||||||    
T  52206906 ttttagtaaatgatattaattttaccattgaaatcaatttaactaatcatttc 52206854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 24569159 - 24569108
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||| ||| ||||||||| |||||||||||  |||||||||||||    
T  24569159 ttttagtaaataatattaattttaccattgaaatcaacacaattaatcattt 24569108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 34750551 - 34750622
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||||||||||| ||||||||||||| ||| |||||||  |||| ||||||||| | | ||| |||||||||    
T  34750551 gttttagtaaatgatactaattttaccattaaaatcaacacaatcaatcatttcatcaaaaatcgtgcacaa 34750622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 40462254 - 40462358
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||| ||||||||||||||| | ||||||||||||||  | |||| |||||| |||||   |||||||||||||| |  | | |||||||||||    
T  40462254 tctcaaaatagttgtcactttagaatgtcaatgcaacatttat--ttttttcccactattatacaactatttattgaattttatccaacttaactactct 40462351  T
Q  170 actaact 176  Q
     ||||||    
T  40462352 tctaact 40462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 45811590 - 45811648
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttattgaatttcactctatttaa 162  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||| || ||||||    
T  45811590 caacatttattatttttttc-actaatatattattatttattgaatttcattcaatttaa 45811648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 11905760 - 11905837
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||| | | |||||||||| ||||||||||||||||| |||||||| || ||||   |||||||||||||||||    
T  11905760 aaaataatttttattttagaatatcaatgcaacatttattat-tttttccattattatatctttatttattgaatttca 11905837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 31158692 - 31158611
Alignment:
Q  71 tctcaaaataattgtcactttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||| |||||||| |||| || ||||  ||||||||| |||||| |||| |||||  |||||||||||||||||    
T  31158692 tctcaaaataattctcactttacaatacaaatgcagtatttattatttttttc-actattataccattatttattgaatttca 31158611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 34302425 - 34302340
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaa-catttattatatttttccactaatatactcttatttattgaatttcactc 155  Q
    |||||||||| |||| |  ||||||||| ||||||| ||||||||||||||| ||||  ||||| | ||||||||||||||||||||    
T  34302425 tctcaaaatagttgttatattagaatatcaatgcaaacatttattatatttt-ccacacatatattgttatttattgaatttcactc 34302340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 34957437 - 34957518
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||| |||||||| ||||  |||| |||||||||||| |||||||  || ||||  ||||||||||||||||||    
T  34957437 tctcaaaataattatcactttaaaataccaatgtaacatttattat-tttttccgttactatatccttatttattgaatttca 34957518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 41038571 - 41038493
Alignment:
Q  75 aaaataattgtcactttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||| |||| || |||| |||||||||| |||||||| ||  |||  ||||||||||||| ||||    
T  41038571 aaaataattgtcactttaaaatacaaatgcagcatttattatttttttccattataatatccttatttattgaacttca 41038493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 54726418 - 54726492
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttatt 144  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||  |||| ||| ||  |||| ||||||||||    
T  54726418 tctcaaaataattgcaactttagaatactaatgcaacatttattagtttttcccattataatacccttatttatt 54726492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 23068137 - 23068213
Alignment:
Q  76 aaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||| |||||| ||||| ||| ||||||||||||| ||| || | || |||||| |||||||||||||||||    
T  23068137 aaataattgttactttacaatatcaatacaacatttattatttttgtc-attattatacttttatttattgaatttca 23068213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 24245154 - 24245117
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaa 258  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  24245154 gttttagtaaataatactaattttattattgaaatcaa 24245117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 29024026 - 29023969
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    |||||||||||| ||||||||||||| ||  |||||||  ||||||||||||| ||||    
T  29024026 gttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcattttttta 29023969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 33491125 - 33491072
Alignment:
Q  239 aattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||||||||||||  |||||||||||||| |||  || |||||||||    
T  33491125 aattttactattgaaatcaacacaattaatcatttccttaataatcgtgcacaa 33491072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 38795405 - 38795470
Alignment:
Q  227 gtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||||| ||||||||||||| |||||||| ||  |||||||||||||| ||| | | |||||||||    
T  38795405 gtaaatgatactaattttaccattgaaataaacacaattaatcatttccttaaatatcgtgcacaa 38795470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 3901209 - 3901157
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||||||||| ||| ||||||||  |||||||| ||| |||||||||||||    
T  3901209 gttttagtaaatgatattaattttatcattgaaattaatacaattaatcattt 3901157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 11632136 - 11632188
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||||  ||||||||||||  ||||||||||  |||||||||||||    
T  11632136 gttttagtaaatactactaattttaccgttgaaatcaacacaattaatcattt 11632188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 33491543 - 33491435
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttc-cactaatatactcttatttatt-gaatttcactctatttaactact 167  Q
    |||||||||||||||||||||| |||| ||||| |  |||||| || |||||| ||||| ||||| ||||||||||  |||||||  | | |||||||||    
T  33491543 tctcaaaataattgtcactttacaatactaatgtagtatttatgatttttttcgcactattatacccttatttattaaaatttcatacaacttaactact 33491444  T
Q  168 ctactaact 176  Q
    | |||||||    
T  33491443 ccactaact 33491435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 7e-25; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 35313820 - 35313902
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| |||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  35313820 tctcaaaataattgtcactttacaataataatgcaacatttattacttttttccactattatactcttatttattgaatttca 35313902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 43410363 - 43410457
Alignment:
Q  75 aaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||| || |||||||| ||||||||||||||| || | ||||||||||    
T  43410363 aaaataattgtcactttagaatactaatgcaacatttattatttttttccattattatactctcatttattgaatttcattcaacttaactactc 43410457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 17695261 - 17695369
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaatttcactctatttaactact 167  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||   ||||||||||| ||||| ||||||||||||||||||  | | |||||||||    
T  17695261 tctcaaaataattgtcactttagaatatcaatgcagcatttattattattttttccactattatacccttatttattgaatttcatccaacttaactact 17695360  T
Q  168 ctactaact 176  Q
    |||||||||    
T  17695361 ctactaact 17695369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 28186147 - 28186253
Alignment:
Q  71 tctcaaaataattgtcactttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||| ||||||| ||||  ||| ||||||||||||||||| |||  | ||||||||||||||||| || | |||||||||||    
T  28186147 tctcaaaataattgtcactttataatataaatgcagtattaattatatttttccactattatttttttatttattgaatttcattcaacttaactactct 28186246  T
Q  170 actaact 176  Q
     ||||||    
T  28186247 gctaact 28186253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 14523552 - 14523446
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactc 168  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  ||||||| || ||||  |||||| ||||||||||| ||| | ||||||||||    
T  14523552 tctcaaaataattgtcactttagaatatcaatgcaacatttattattattttccattattatatccttattaattgaatttca-tctaacttaactactc 14523454  T
Q  169 tactaact 176  Q
     |||||||    
T  14523453 cactaact 14523446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 5272314 - 5272213
Alignment:
Q  75 aaaataattgtcactttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||| ||| || ||||| ||||||||||||||||||  | |||||| ||||| ||||    
T  5272314 aaaataattgtcactttagaatacaaatgcaacatttattat-ttttcccattattatacccttatttattgaatttcatccaatttaattactccacta 5272216  T
Q  174 act 176  Q
    |||    
T  5272215 act 5272213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 5789827 - 5789746
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||| ||||||||||| |||||  |||||||||||||||||    
T  5789827 tctcaaaataattgtcactttacaatatcaatgcatcatttattat-tttttccactattataccattatttattgaatttca 5789746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 34120617 - 34120535
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||  |||||| |||||||||| |||||||| || |||||||||| |||||||||||||    
T  34120617 tctcaaaataattgtcactttaaaataccaatgcagcatttattatttttttccattattatactcttacttattgaatttca 34120535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 25904722 - 25904803
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||| ||||| |||||| |||||||||| |||||||||||| ||||| || |||||||||||||||    
T  25904722 tcaaaataattgtcactttaaaatattaatgcatcatttattattatttttccactattataccctaatttattgaatttca 25904803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 7439033 - 7438934
Alignment:
Q  71 tctcaaaataattgtcactttagaatat--aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    ||||||||||||||||||||| ||||||  ||| || |||||||||| || | |||||| ||||| |||||||||||||||||| || | ||||||||||    
T  7439033 tctcaaaataattgtcacttttgaatatcaaatacatcatttattattttgtcccactattatacccttatttattgaatttcattcaacttaactactc 7438934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 36004887 - 36004971
Alignment:
Q  71 tctcaaaataattgtcactttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactc 155  Q
    ||||||||||||| ||| |||| ||   ||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||||    
T  36004887 tctcaaaataattttcattttaaaaagcaatgcaacatttattatatttctgcactaatatattcttatttattaaatttcactc 36004971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 3323452 - 3323346
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||| |||||||| ||||  |||||| |||||||||| |||| |||||| || ||||||| |||||||||||||  | | ||||||||||     
T  3323452 tctcaaaataattctcactttacaataccaatgcagcatttattattttttcccactattacactcttacttattgaatttcatccaacttaactactcc 3323353  T
Q  170 actaact 176  Q
    |||||||    
T  3323352 actaact 3323346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 9458445 - 9458364
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| |||||||| || ||||| |||||||||| |||||||    
T  9458445 tctcaaaataattgtcactttagaataccaatgcagcatttattat-tttttccattattatacccttatttattaaatttca 9458364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 16805937 - 16806007
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||||||||||||||||| |||||||  ||||||||||||||||||  || |||||||||    
T  16805937 ttttagtaaatgatactaattttactattaaaatcaacacaattaatcatttctttaataatcgtgcacaa 16806007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 16845218 - 16845288
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||||||||||||||||| |||||||  ||||||||||||||||||  || |||||||||    
T  16845218 ttttagtaaatgatactaattttactattaaaatcaacacaattaatcatttctttaataatcgtgcacaa 16845288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 36354622 - 36354517
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||  ||||||  ||||||||| |||||||| || |||||  |||||||||||||||||  | | ||||||||||     
T  36354622 tctcaaaataattgtcactttagaataccaatgcagaatttattat-tttttccattattataccattatttattgaatttcatccaacttaactactcc 36354524  T
Q  170 actaact 176  Q
    |||||||    
T  36354523 actaact 36354517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 7495019 - 7494936
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||| ||||||||| | ||||| || || ||||| ||||||||||||||||||    
T  7495019 tctcaaaataattgtcactttagaataccaatgcagcatttattatttttttttcattattatacccttatttattgaatttca 7494936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 37322362 - 37322467
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactc 168  Q
    |||||||||||||||||||||||||||   ||| | |||||||||| |||||||| || ||||| |||||||||||||||||| ||| | ||||||||||    
T  37322362 tctcaaaataattgtcactttagaatacctatgtagcatttattat-tttttccattattatacccttatttattgaatttca-tctaacttaactactc 37322459  T
Q  169 tactaact 176  Q
     |||||||    
T  37322460 cactaact 37322467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 16028268 - 16028351
Alignment:
Q  90 ttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    ||||||||| |||||||||||||| || |||||| |||| |||||  |||||||||||||||||||| | ||||||||| |||||    
T  16028268 ttagaatattaatgcaacatttataatttttttc-actattatacatttatttattgaatttcactccacttaactactttacta 16028351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 5789706 - 5789635
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||||   |||||||||||||||||| ||||| |||||||||||||| |||  || |||||||||    
T  5789706 gttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataatcgtgcacaa 5789635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 25637413 - 25637496
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||| ||||||||| | |||||||| || || || |||||||||| |||||||    
T  25637413 tctcaaaataattgtcactttagaataccaatgcagcatttattattttttttccattattacacccttatttattaaatttca 25637496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 34120701 - 34120634
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactctt 137  Q
    |||||||||||||||||||||| ||||  |||||| |||||||||| |||||||| || |||||||||    
T  34120701 tctcaaaataattgtcactttaaaataccaatgcagcatttattatttttttccattattatactctt 34120634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 43730348 - 43730407
Alignment:
Q  85 tcactttagaatataatgcaacatttattatatttttccactaatatactcttatttatt 144  Q
    ||||||||| |||||||| |||||||||||| ||||| |||||||||||| ||| |||||    
T  43730348 tcactttagcatataatgaaacatttattatgttttttcactaatatacttttacttatt 43730407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 19937733 - 19937803
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||| ||||||||| |||||||||||  |||||||||||||| |||  || |||||||||    
T  19937733 ttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaa 19937803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 36794217 - 36794323
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||| |||||||| ||||  |||||| |||||||||| ||||| || ||  |||| ||||||||||||| ||||  | | ||||||||||     
T  36794217 tctcaaaataattatcactttaaaataccaatgcagcatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactcc 36794316  T
Q  170 actaact 176  Q
    |||||||    
T  36794317 actaact 36794323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 39785518 - 39785600
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||| |||||| ||| |||| ||| ||  |||| ||||||||||||| ||||    
T  39785518 tctcaaaataattgtcactttagaataccaatgcagcatttactattttttcccattataatacccttatttattgaacttca 39785600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 19444083 - 19444156
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaa 147  Q
    |||||||||||||||| | ||||| ||||||||||||||||| ||||| || || ||||| ||| |||||||||    
T  19444083 aaaataattgtcacttcaaaatatcaatgcaacatttattatttttttacattattatacccttgtttattgaa 19444156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 23492837 - 23492886
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||  ||||||||||| |||||||||||||||| ||||||    
T  23492837 caacatttattattcttttccactaacatactcttatttattgcatttca 23492886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 26863539 - 26863432
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatat---ttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||||||||||||||||| |||||  ||| || |||||||||||   |||||||||| |||||  ||||||| |||||||||  | | ||||||||||    
T  26863539 tcaaaataattgtcactttacaatatctatgtaaaatttattatatttcttttccactattatacatttatttaatgaatttcatccgacttaactactc 26863440  T
Q  169 tactaact 176  Q
     |||||||    
T  26863439 cactaact 26863432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 28170730 - 28170681
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||| ||||| ||||| ||||||||||||||| ||||||||    
T  28170730 caacatttattattttttttcactattatactcttatttatagaatttca 28170681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 34451512 - 34451471
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacattta 111  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  34451512 tctcaaaataattgtcactttagaatatcaatgcaacattta 34451471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 45235512 - 45235596
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattat--atttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||   ||||| || || ||||  ||||||||||||||||||    
T  45235512 tctcaaaataattgtcactttataataccaatgcaacatttattattatttttttcattactatatccttatttattgaatttca 45235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 16463744 - 16463812
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgca 289  Q
    |||||||||||| ||||||||||||| ||  |||||||  |||||||||||||| |||  |||||||||    
T  16463744 gttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataaccgtgca 16463812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 39691457 - 39691529
Alignment:
Q  104 aacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    ||||||||||||  ||||||| || ||||| |||||||||||||||||| || | || ||||||| |||||||    
T  39691457 aacatttattattattttccattattatacccttatttattgaatttcattcaactttactactccactaact 39691529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 43730603 - 43730654
Alignment:
Q  124 actaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||| |||||    
T  43730603 actaatatacttttatttattgaatttcac-ctacttaactactctagtaact 43730654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 11742709 - 11742658
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatattttt 121  Q
    |||||||||||||||||||||||||||  |||| |||||||||||| |||||    
T  11742709 tctcaaaataattgtcactttagaatacgaatgaaacatttattattttttt 11742658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 19937317 - 19937424
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttcc-actaatatactcttatttattgaatttcactctatttaactactc 168  Q
    ||||| ||||||||||||||||| |||  ||||||||||||| | | ||||||| | || |||||  ||||||||||||||| | || | ||||||||||    
T  19937317 tctcataataattgtcactttagtataacaatgcaacatttaatttttttttcccattattatacctttatttattgaattttattcaacttaactactc 19937416  T
Q  169 tactaact 176  Q
     |||||||    
T  19937417 cactaact 19937424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 38188029 - 38187979
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttattgaatttcact 154  Q
    |||||||||||| ||||||||||| ||||||  |||||||||||||||||||    
T  38188029 caacatttatta-atttttccactcatataccattatttattgaatttcact 38187979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 43699656 - 43699605
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||| ||||| |||||||||||||||||||||||||  || ||||||||||    
T  43699656 ttttaataaatgatactaattttactattgaaatcaacacagttaatcattt 43699605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 45235636 - 45235707
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||||||||||| ||| ||||||||| |||||||||||  |||| ||||||||| |||  || |||||||||    
T  45235636 gttttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaa 45235707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 16377713 - 16377643
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||| |||||| ||| ||||||||| |||| ||||||  ||||||||||||||||||  || |||||||||    
T  16377713 ttttggtaaatgatattaattttaccattgtaatcaacacaattaatcatttctttaataatcgtgcacaa 16377643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 17695386 - 17695456
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||| |||||| |||  |||||||| |||||||||||| |||||||||||||| |||  || |||||||||    
T  17695386 tttttgtaaatgatatcaattttaccattgaaatcaatacaattaatcatttccttaataatcgtgcacaa 17695456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 34225527 - 34225605
Alignment:
Q  75 aaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||| |||||  ||||||  ||||||||| ||||| || || ||||| |||||||||| |||||||    
T  34225527 aaaataattgtcactttggaataccaatgcagtatttattattttttttcattattatacccttatttattaaatttca 34225605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 35242461 - 35242371
Alignment:
Q  87 actttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    |||||||||||  ||||||| |||||||||   ||| ||||| |||||| |||||||||||||||||  | | |||||||||| |||||||    
T  35242461 actttagaataccaatgcaatatttattattagttttcactattatacttttatttattgaatttcatccaacttaactactcaactaact 35242371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 8947110 - 8947057
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||||  |||||||||||  |||||||||||  ||||||||||||||    
T  8947110 gttttagtaaatattactaattttatcattgaaatcaacacaattaatcatttc 8947057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 8947202 - 8947126
Alignment:
Q  99 aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    ||||||| ||||||||| |||||| | || ||||| ||||||||||||||||||  | | |||||||||| |||||||    
T  8947202 aatgcaatatttattatttttttc-attattatacccttatttattgaatttcatccaacttaactactccactaact 8947126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 16463620 - 16463665
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattat 115  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||    
T  16463620 tctcaaaataattgtcactttagaataccaatgcagcatttattat 16463665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 13435727 - 13435683
Alignment:
Q  100 atgcaacatttattatatttttccactaatatactcttatttatt 144  Q
    |||||||||||||||| |||| ||| ||||||||| |||||||||    
T  13435727 atgcaacatttattattttttaccattaatatactattatttatt 13435683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 15359269 - 15359161
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttatta-ta-tttttccactaatatactcttatttattgaatttcactctatttaactact 167  Q
    ||||||||||||||| |||||||||||| ||||||  |||||||| || ||||| || ||  |||| ||||||||||||| ||||  | | |||||||||    
T  15359269 tctcaaaataattgttactttagaatatcaatgcagtatttattagtatttttttcattataatacccttatttattgaacttcatccaacttaactact 15359170  T
Q  168 ctactaact 176  Q
    | |||||||    
T  15359169 ccactaact 15359161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 43115859 - 43115803
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    |||||||||||  |||||| ||||  |||||||||||  ||||||||||||||||||    
T  43115859 ttttagtaaatgctactaactttatcattgaaatcaacacaattaatcatttcttta 43115803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 181491 - 181595
Alignment:
Q  72 ctcaaaataattgtcactttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 171  Q
    ||||||||||||||||||||| |||| |||||||||||||||||  |||| ||||| ||||| ||||||||||||||||||  | | |||||||||| ||    
T  181491 ctcaaaataattgtcactttacaatacaatgcaacatttattattatttttcactattatacccttatttattgaatttcatccaacttaactactccac 181590  T
Q  172 taact 176  Q
    |||||    
T  181591 taact 181595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 12307775 - 12307691
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactc 155  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  12307775 tctcaaaataattgtcactttaaaatattaatacaacatttattat-tttttcaactaatatattcttatttattgaatttcactc 12307691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 11656128 - 11656045
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| ||||| ||| || ||||| ||||||||||||||||||    
T  11656128 tctcaaaataattgtcactttagaatatcaatgcagcatttattatttttttcccattattatacccttatttattgaatttca 11656045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 34299931 - 34300006
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatt-tttccactaatatactcttatttattgaat 148  Q
    |||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||  ||||||||||||||    
T  34299931 aaaataattgtcactttagaatatcaatacaacatttattattttctttccactaatatatccttatttattgaat 34300006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 1225103 - 1225177
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaactct 296  Q
    ||||||||||| ||| ||||||||||||| |||||||  |||||||||||||||||| ||  |||||||||||||    
T  1225103 ttttagtaaataatattaattttactatttaaatcaacacaattaatcatttctttaaaactcgtgcacaactct 1225177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 5302284 - 5302366
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| ||  |||| | ||||||||||| ||||    
T  5302284 tctcaaaataattgtcactttagaatactaatgcagcatttattatttttttccattataatacccgtatttattgaacttca 5302366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 7920174 - 7920254
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||| |||||  |||||||||||||||||    
T  7920174 tctcaaaataattatcactttagaatatcaatgcaacatttatt-tattttt-cactattataccattatttattgaatttca 7920254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 29363237 - 29363321
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||| ||||||  |||||| ||||||||||   |||||||| || ||||||||||||||||||||||||    
T  29363237 tctcaaaataattgtcacttcagaataccaatgcagcatttattattattttttccattattatactcttatttattgaatttca 29363321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 30716832 - 30716913
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaattt 150  Q
    |||||||||||||||||||||||||||  | |||||||||||||| | |||||||| ||  |||||||||||||||||||||    
T  30716832 tctcaaaataattgtcactttagaataccagtgcaacatttattattttttttccattataatactcttatttattgaattt 30716913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 23397796 - 23397716
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatatttttc-cactaatatactcttatttattgaatttc 151  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| |  | |||| |||| ||||||||||||||||    
T  23397796 tcaaaataattgtcactttagaatatcaatgcaacatttattatgttttccttagtaatttacttttatttattgaatttc 23397716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 6801863 - 6801970
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttatta-tatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| | |||||||| ||  |||| ||||||||| ||| ||||  | | ||||||||||    
T  6801863 tctcaaaataattgtcactttataatatcaatgcaacatttattattttttttccattataatacccttatttatcgaacttcatccaacttaactactc 6801962  T
Q  169 tactaact 176  Q
     |||||||    
T  6801963 cactaact 6801970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 24983628 - 24983524
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||| ||  || || ||||| ||| | ||| ||||||||||||| ||||||||||||||||||| | | ||||||||||     
T  24983628 tctcaaaataattgtcactttagattaccaacgccacatt-atttt-tttatccactaatatacccttatttattgaatttcacccaacttaactactcc 24983531  T
Q  170 actaact 176  Q
    |||||||    
T  24983530 actaact 24983524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 8695007 - 8695084
Alignment:
Q  99 aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    |||||||||||||||||  |||||||||| |||| |||||||||| ||||||||||  ||||||| |||  |||||||    
T  8695007 aatgcaacatttattattattttccactagtatattcttatttatagaatttcacttcatttaaccacttcactaact 8695084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 27367607 - 27367523
Alignment:
Q  72 ctcaaaataattgtcactttagaatat-aatgcaacatttatta--tatttttccactaatatactcttatttattgaatttcac 153  Q
    |||| |||||||||||||||| ||||  |||| |||||||||||  | ||||||||||| ||||| |||||||||||||||||||    
T  27367607 ctcagaataattgtcactttacaataccaatgtaacatttattagttttttttccactattatacccttatttattgaatttcac 27367523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 27457954 - 27457870
Alignment:
Q  72 ctcaaaataattgtcactttagaatat-aatgcaacatttatta--tatttttccactaatatactcttatttattgaatttcac 153  Q
    |||| |||||||||||||||| ||||  |||| |||||||||||  | ||||||||||| ||||| |||||||||||||||||||    
T  27457954 ctcagaataattgtcactttacaataccaatgtaacatttattagttttttttccactattatacccttatttattgaatttcac 27457870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 21804583 - 21804531
Alignment:
Q  226 agtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    ||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||    
T  21804583 agtaaatgatactaattttacaattgaaattaatacaattaatcatttcttta 21804531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 181611 - 181658
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaat 268  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  181611 gttttagtaaatactactaattttactattgaaatcaatacaattaat 181658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 21010104 - 21010210
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatattttt--ccactaatatactcttatttattgaatttcactctatttaactact 167  Q
    |||||||||||||||||||||| ||||  |||||| ||||||| || |||||  ||| || |||||| |||||||||||||||||  | | |||||||||    
T  21010104 tctcaaaataattgtcactttataataccaatgcagcatttataatttttttttccattattatactgttatttattgaatttcatccaacttaactact 21010203  T
Q  168 ctactaa 174  Q
    | |||||    
T  21010204 ccactaa 21010210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 21425738 - 21425656
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||   ||||||||| | ||||  ||||||||||||||||||    
T  21425738 tcaaaataattgttactttacaatatcaatgcaacatttattattattttttccaccattatatccttatttattgaatttca 21425656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 34657746 - 34657637
Alignment:
Q  71 tctcaaaataattgtcactttagaatata-atgcaacatttattatattttt---ccactaatatactcttatttattgaatttcactctatttaactac 166  Q
    |||||||||||||||||||||| ||||   |||||  |||||||||||||||   |||||| |||||  |||||||||||||||||  | | ||||||||    
T  34657746 tctcaaaataattgtcactttacaatacctatgcagaatttattatattttttttccactattatacatttatttattgaatttcatccaacttaactac 34657647  T
Q  167 tctactaact 176  Q
    || |||||||    
T  34657646 tccactaact 34657637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 6834545 - 6834444
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    ||||||||||| || ||||||||| |||||| || ||||||| |||||||| || |||| | ||||||||||||| ||| || ||||| ||| |||||||    
T  6834545 aaaataattgttacgttagaatatcaatgcagcacttattatttttttccattattatatt-ttatttattgaatctcattcaatttatctattctacta 6834447  T
Q  174 act 176  Q
    |||    
T  6834446 act 6834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 15058055 - 15058132
Alignment:
Q  75 aaaataattgtcactttagaatata-atgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||| ||||   |||||||||||||||| |||||  |||| ||||| ||||||||||||||||||    
T  15058055 aaaataattgtcactttataataccgatgcaacatttattat-tttttgtactattatacccttatttattgaatttca 15058132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 23142601 - 23142682
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||| ||||||||||||||  | |||| ||| || ||||| ||| ||||||||||||||    
T  23142601 tctcaaaataattgtcactttacaatatcaatgcaacatttatcgttttttcccattattatac-cttctttattgaatttca 23142682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 1956035 - 1955990
Alignment:
Q  224 ttagtaaattatactaattttactattgaaatcaattcaattaatc 269  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||||    
T  1956035 ttagtaaatgatactaattttaccattgaaatcaatacaattaatc 1955990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 24983508 - 24983455
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||| | ||||||||||| ||||||||||| |||| ||||||||||    
T  24983508 gttttagtaaatgacactaattttaccattgaaatcaactcaactaatcatttc 24983455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 31894269 - 31894217
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||||  |||||||||||| |||||||||||  |||||||||||||    
T  31894269 gttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattt 31894217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 32440828 - 32440722
Alignment:
Q  71 tctcaaaataattgtcactttagaatat---aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactact 167  Q
    ||||||||||||||||||||||||| ||   |||||| ||||||||||  ||||||| || | |||  |||||||||  ||||||  | | |||||||||    
T  32440828 tctcaaaataattgtcactttagaaaatatcaatgcagcatttattattattttccattattgtacctttatttattacatttcatccaacttaactact 32440729  T
Q  168 ctactaa 174  Q
    |||||||    
T  32440728 ctactaa 32440722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 1063661 - 1063610
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||| ||||||||||||  |||||||||||  |||||||||||||    
T  1063661 ttttagtaaataatactaattttatcattgaaatcaacacaattaatcattt 1063610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 309
Target Start/End: Original strand, 7920294 - 7920381
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaactctaaatcgaatatta 309  Q
    |||||||||||  |  ||||||||| |||||||||||   ||||||||||||||||| ||| ||||||||| ||| || || ||||||    
T  7920294 ttttagtaaatggttttaattttaccattgaaatcaacaaaattaatcatttctttaaaaatcgtgcacaaatcttaaacggatatta 7920381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 21478276 - 21478194
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattat--atttttccactaatatactcttatttattgaattt 150  Q
    |||||||||||||||||||||| ||||  ||| |||||||||||||   ||||||||||| ||||  ||||||||||| ||||    
T  21478276 tctcaaaataattgtcactttacaataccaatacaacatttattattattttttccactattataaccttatttattgcattt 21478194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 31894388 - 31894309
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||  ||||||| ||||| ||||| |||||||||| |||||||    
T  31894388 tctcaaaataaatgtca-tttacaatatcaatgcaacatttat--tattttttcactattatacccttatttattaaatttca 31894309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 1517247 - 1517298
Alignment:
Q  99 aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||| ||||  |||||||||| | |||||||||||||||||    
T  1517247 aatgcaacatttattatttttt--cactaatatatttttatttattgaatttca 1517298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 1519334 - 1519385
Alignment:
Q  99 aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||| ||||  |||||||||| | |||||||||||||||||    
T  1519334 aatgcaacatttattatttttt--cactaatatatttttatttattgaatttca 1519385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 13087585 - 13087634
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatca 270  Q
    |||||||||||| ||| ||||||||| |||||||||||  ||||||||||    
T  13087585 gttttagtaaatgatattaattttaccattgaaatcaacacaattaatca 13087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 14018764 - 14018821
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    |||||||||||| ||| ||||||| ||||||||||  |||||| ||||||||| ||||    
T  14018764 gttttagtaaatgatattaatttttctattgaaattcattcaactaatcattttttta 14018821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 27367280 - 27367235
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattat 115  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||    
T  27367280 tctcaaaataattgtcactttagaataccaatgcatcatttattat 27367235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 27457627 - 27457582
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattat 115  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||    
T  27457627 tctcaaaataattgtcactttagaataccaatgcatcatttattat 27457582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 32440704 - 32440651
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||| ||||||||||||| ||  |||||||  ||||||||||||||    
T  32440704 gttttagtaaataatactaattttaccatcaaaatcaacacaattaatcatttc 32440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 3291826 - 3291774
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| |||||||| |||| ||| ||||| || ||||||||||||||    
T  3291826 ttttagtaaataatactaatattaccattaaaatcgatacaattaatcatttc 3291774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 23397680 - 23397628
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||||||||||| ||||||||||| ||| ||||||| |||| |||| ||||    
T  23397680 gttttagtaaattacactaattttaccatttaaatcaactcaagtaataattt 23397628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 25418096 - 25418049
Alignment:
Q  119 tttccactaatatactcttatttattgaatttcactctatttaactact 167  Q
    |||||||||||||||| || || |||||||||||||| |||||||||||    
T  25418096 tttccactaatatacttttctt-attgaatttcactcgatttaactact 25418049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 11373617 - 11373511
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||||| |||||| ||||| |||||| |||||||||| |||| |||||| ||||||||||||||||||||||||  | | ||||||||||     
T  11373617 tctcaaaataattgttactttacaatatcaatgcagcatttattattttttcccactattatactcttatttattgaatttcatccaacttaactactcc 11373518  T
Q  170 actaact 176  Q
    |||||||    
T  11373517 actaact 11373511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 34947440 - 34947546
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||||| || ||||| || |||||||||||||||  | | ||||||||||     
T  34947440 tctcaaaataattgtcactttagaataccaatgcaacatttattatttttttccattattataccctcatttattgaatttcatccaacttaactactcc 34947539  T
Q  170 actaact 176  Q
    |||||||    
T  34947540 actaact 34947546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 32346241 - 32346137
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||| ||| ||||||||| ||||||| |||||||||| |||||||| || ||||| |||||||||||||||||| || | ||||||||||     
T  32346241 tctcaaaataattatcattttagaatactaatgcagcatttattatctttttccattattatacccttatttattgaatttcattcaacttaactactcc 32346142  T
Q  170 actaa 174  Q
    |||||    
T  32346141 actaa 32346137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 759280 - 759198
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| |||||||| || ||||| ||||||||||||||||||    
T  759280 tctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccattattatacccttatttattgaatttca 759198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 7457607 - 7457530
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  7457607 tcaaaataattatcactttacaatatcaatgcaacatttattat-tttttccactattatactcttatttattgaattt 7457530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 21760173 - 21760091
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||  || ||||| || | |||||||||||||    
T  21760173 tctcaaaataattgtcactttagaatatcaatgcaacatttattatatttttcctttattataccctcaattattgaatttca 21760091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 28202498 - 28202416
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||||||||||||||||    
T  28202498 tctcaaaataattgtcactttagaataccaatacagcatttattatttttttccattattatactcttatttattgaatttca 28202416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 23745521 - 23745420
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttc-cactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    ||||||||||||||| | |||||||||| |||||||||||||||||||||||  ||||||||||| |||||||||||||||  | || | ||||||||||    
T  23745521 tctcaaaataattgttattttagaatattaatgcaacatttattatatttttttcactaatatacacttatttattgaattatattccacttaactactc 23745422  T
Q  169 ta 170  Q
    ||    
T  23745421 ta 23745420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 2459413 - 2459517
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 171  Q
    |||||||||||| ||||||| ||||  |||||| |||||||||| ||||| ||||| ||||| ||||||||||||||||||  ||| |||||||||| ||    
T  2459413 tcaaaataattgacactttacaataccaatgcagcatttattattttttttcactattatacccttatttattgaatttcatcctacttaactactccac 2459512  T
Q  172 taact 176  Q
    |||||    
T  2459513 taact 2459517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 21350815 - 21350708
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||||||||||||||||||| ||||  |||||| |||||||||| ||||| |||||| ||||| ||||||||||||||||||  | | ||||||||||    
T  21350815 tctcaaaataattgtcactttacaataccaatgcagcatttattattttttttccactattatacccttatttattgaatttcatccaacttaactactc 21350716  T
Q  169 tactaact 176  Q
     |||||||    
T  21350715 cactaact 21350708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 34100732 - 34100658
Alignment:
Q  75 aaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaat 148  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  34100732 aaaataattgtcactttacaatactaatgcaacatttattatgttttttcactattatacccttatttattgaat 34100658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 37245630 - 37245712
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||| ||||  ||||| ||||| ||||||||||||||||||    
T  37245630 tctcaaaataattgtcactttacaataccaatgcaacatttattattttttctcactattatacccttatttattgaatttca 37245712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 48608807 - 48608888
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||| ||||||  ||||||||| |||||||| || ||||||||||||||||||||||||    
T  48608807 tctcaaaataattgtcactttaaaatattaatgcagtatttattat-tttttccattattatactcttatttattgaatttca 48608888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 3178391 - 3178287
Alignment:
Q  75 aaaataattgtcactttagaata-taatgcaacat--ttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 171  Q
    ||||||||||| ||||||||||| |||||||||||  ||||||| |||| ||| |||||||| ||||||||||||||||||  | | |||||||||| ||    
T  3178391 aaaataattgttactttagaatactaatgcaacatatttattatgttttcccattaatatacccttatttattgaatttcatccaacttaactactccac 3178292  T
Q  172 taact 176  Q
    |||||    
T  3178291 taact 3178287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 41506253 - 41506148
Alignment:
Q  72 ctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactcta 170  Q
    |||||||||||| |||||||| ||||| ||||||| ||||||||  ||||| || || ||||||||||||||||||||||||  | | |||||||||| |    
T  41506253 ctcaaaataattatcactttacaatatcaatgcaatatttattaatttttttcaatattatactcttatttattgaatttcatccaacttaactactcca 41506154  T
Q  171 ctaact 176  Q
    ||||||    
T  41506153 ctaact 41506148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 83324 - 83407
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||| ||||||||| | |||||||| ||  |||||||||||||||||||||||    
T  83324 tctcaaaataattgtcactttagaataccaatgcagcatttattattttttttccattatcatactcttatttattgaatttca 83407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 28103670 - 28103755
Alignment:
Q  71 tctcaaaataattgtcactttagaatataat-gcaacatttattatatttt---tccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||| ||||   ||||||| ||||| ||||||||||||||||||    
T  28103670 tctcaaaataattgtcactttacaatacaattgcaacatttattattttttttttccactattatacgcttatttattgaatttca 28103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 42935598 - 42935680
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaat-atactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||||| | || |||||||||||||||||| ||||    
T  42935598 tctcaaaataattgtcactttagaatacaaatgcaacatttattat-tttttccaattataatactcttatttattgaacttca 42935680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 25571360 - 25571441
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||  | || ||||| ||||||||||||||||||    
T  25571360 tctcaaaataattgtcactttagaataccaatgcaacatttattat-ttttttaattattatacccttatttattgaatttca 25571441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 27920926 - 27920979
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttcc 123  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  27920926 tctcaaaataattgtcactttagaatattaatgcaacatttattatttttttcc 27920979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 36790678 - 36790762
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattat--atttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||   |||||||| || ||||| ||||||||||||||||||    
T  36790678 tctcaaaataattgtcactttagaatagcaatgcagcatttattattattttttccattattatacccttatttattgaatttca 36790762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 21390234 - 21390341
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttcactct-atttaactact 167  Q
    |||||||||||||||||||||| ||||  |||||||| |||||||| ||||| ||| || ||||| |||||||||||||||||| ||| | |||||||||    
T  21390234 tctcaaaataattgtcactttataataccaatgcaacgtttattattttttttccattattatacccttatttattgaatttca-tctaacttaactact 21390332  T
Q  168 ctactaact 176  Q
    | |||||||    
T  21390333 ccactaact 21390341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 30107072 - 30107155
Alignment:
Q  75 aaaataattgtcactttagaata-taatgcaacattt-attatatttttccactaatatactcttatttattgaatttcactcta 157  Q
    |||||||||||||| |||| ||| ||||||||||||| ||||| |||||||||| ||||||  ||||||||||||||||||||||    
T  30107072 aaaataattgtcaccttaggatactaatgcaacattttattat-tttttccactcatataccattatttattgaatttcactcta 30107155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 31930691 - 31930606
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaat---atactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| |||||||  | ||   | |||||||||||||||||||||    
T  31930691 tctcaaaataattgtcactttagaatatcaatgaaacatttattatttttttccctttattaaacactcttatttattgaatttca 31930606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 44180268 - 44180319
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  44180268 ttttagtaaattatactaattttaccattgaaatcaacacaattaatcattt 44180319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 8592629 - 8592547
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||| ||| |||| ||||| |||||| |||||||||| |||| | |||| |||||||||||||||| |||||||    
T  8592629 tctcaaaataattttcattttacaatatcaatgcagcatttattattttttcctactattatactcttatttattaaatttca 8592547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 17610722 - 17610632
Alignment:
Q  76 aaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaacta 165  Q
    |||||| ||| |||||||||||| |||  ||||||||||   ||||||||||||||||  | ||||||||||||||||||||| |||||||    
T  17610722 aaataactgtgactttagaatatcaatataacatttatttattttttccactaatatatccctatttattgaatttcactctaattaacta 17610632  T

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Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 19271921 - 19271816
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||||| |||||| ||||  ||||||||||||||||| |||||||| || ||||| |||||||||| | |||||  | | ||||||||||     
T  19271921 tctcaaaataattgttactttacaataccaatgcaacatttattat-tttttccaatattatacccttatttattaattttcatccaacttaactactcc 19271823  T
Q  170 actaact 176  Q
    |||||||    
T  19271822 actaact 19271816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 24516478 - 24516372
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||| |||||||||||| |||| ||||| ||||||||||||||||| |||| |||||| | ||   |||||||||||||||||  | | ||||||||||     
T  24516478 tctcgaaataattgtcattttacaatatcaatgcaacatttattatcttttcccactattttatctttatttattgaatttcatccaacttaactactcc 24516379  T
Q  170 actaact 176  Q
    |||||||    
T  24516378 actaact 24516372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 37490319 - 37490421
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    |||| ||| ||||||||| ||||  |||||||||||||||||  ||||  |||| ||| |||||||||||||||||||| || |||||| ||||| ||||    
T  37490319 aaaacaatagtcactttaaaataccaatgcaacatttattattattttttactagtatgctcttatttattgaatttcattcaatttaattactccacta 37490418  T
Q  174 act 176  Q
    |||    
T  37490419 act 37490421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 40076258 - 40076340
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||  |||||| |||||||||| |||||||| ||  | || ||||||||||||||||||    
T  40076258 tctcaaaataattgtcactttataataccaatgcagcatttattatttttttccattatcacacccttatttattgaatttca 40076340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 43873863 - 43873969
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| |||| ||| ||  ||||  ||||||||| || ||||  | | ||||||||||     
T  43873863 tctcaaaataattgtcactttagaatatcaatgcagcatttattattttttcccattataatacatttatttattaaacttcatccaacttaactactcc 43873962  T
Q  170 actaact 176  Q
    |||||||    
T  43873963 actaact 43873969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 34947562 - 34947619
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    |||||||||||| ||| ||||||||| |||||||||||  ||||||||||||||||||    
T  34947562 gttttagtaaatgataataattttaccattgaaatcaacacaattaatcatttcttta 34947619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 46478453 - 46478400
Alignment:
Q  100 atgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||||||||||    
T  46478453 atgcaacatttattattttttttccactattatactcttatttattgaatttca 46478400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 9785928 - 9786008
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||  |||| |  || ||||| ||||||||||||||||    
T  9785928 tctcaaaataattgtcactttaaaatattaatgcagcatttattattatttttctttattatacccttatttattgaattt 9786008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 22738764 - 22738820
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    ||||||||||| ||||||||||||| ||||||||| |  ||||||||||||||||||    
T  22738764 ttttagtaaatgatactaattttaccattgaaatctacacaattaatcatttcttta 22738820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 165
Target Start/End: Original strand, 39519288 - 39519380
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttcc-actaatatactcttatttattgaatttcactctatttaacta 165  Q
    ||||||||| |||||||||||||| ||| ||| |||| |||| ||||||| || ||||||   |||||||||||||||||||| |||||||||    
T  39519288 aaaataattatcactttagaatatcaatacaatatttgttatttttttcccacaaatataactttatttattgaatttcactcgatttaacta 39519380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 34100613 - 34100562
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||||||||  ||||||||||||||||||||||||  |||||||||||||    
T  34100613 ttttagtaaatgctactaattttactattgaaatcaacacaattaatcattt 34100562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 6495122 - 6495041
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||| |||| | |||||||| | ||||| || || ||||| |||||||||| |||||||    
T  6495122 tctcaaaataattgtcactttagaatatcaatgtagcatttatt-ttttttttcattattatacccttatttattaaatttca 6495041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 12631381 - 12631438
Alignment:
Q  235 tactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||  || |||||||||    
T  12631381 tactaattttactattgaaatcaatacaattaattatttccttaataatcgtgcacaa 12631438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 33932102 - 33932057
Alignment:
Q  98 taatgcaacatttattatatttttccactaatatactcttatttat 143  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||    
T  33932102 taatgaaagatttataatatttttccactaatatactcttatttat 33932057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 37490437 - 37490509
Alignment:
Q  104 aacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    ||||||||||||  ||||  |||| ||| |||||||||||||||||||| || |||||| ||||| |||||||    
T  37490437 aacatttattattattttttactagtatgctcttatttattgaatttcattcaatttaattactccactaact 37490509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 47045519 - 47045468
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||| |||| ||||||||||||| ||||||||||| |||||||||||||||    
T  47045519 ttttaggaaatgatactaattttac-attgaaatcaactcaattaatcatttc 47045468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 16904317 - 16904399
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaattt 150  Q
    ||||||||||||||||  |||||||||| |||| |  |||||||||   ||||||||||| ||||| ||||||||||||||||    
T  16904317 tctcaaaataattgtctttttagaatatcaatgtagtatttattattattttttccactattatacccttatttattgaattt 16904399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 17609393 - 17609350
Alignment:
Q  225 tagtaaattatactaattttactattgaaatcaattcaattaat 268  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||    
T  17609393 tagtaaattatactaattttaccattaaaatcaactcaattaat 17609350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 17609636 - 17609593
Alignment:
Q  225 tagtaaattatactaattttactattgaaatcaattcaattaat 268  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||    
T  17609636 tagtaaattatactaattttaccattaaaatcaactcaattaat 17609593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 17609879 - 17609836
Alignment:
Q  225 tagtaaattatactaattttactattgaaatcaattcaattaat 268  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||    
T  17609879 tagtaaattatactaattttaccattaaaatcaactcaattaat 17609836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 17610122 - 17610079
Alignment:
Q  225 tagtaaattatactaattttactattgaaatcaattcaattaat 268  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||    
T  17610122 tagtaaattatactaattttaccattaaaatcaactcaattaat 17610079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 17610365 - 17610322
Alignment:
Q  225 tagtaaattatactaattttactattgaaatcaattcaattaat 268  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||    
T  17610365 tagtaaattatactaattttaccattaaaatcaactcaattaat 17610322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 23670425 - 23670508
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatt-tttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| |||| ||||||| |||||||||| ||    || ||| |||||||||||||||| |||||||    
T  23670425 tctcaaaataattgtcactttacaatactaatgcatcatttattattttccccccgctattatactcttatttattaaatttca 23670508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 24516355 - 24516304
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||||||||  |||||||||||| |||||||||||  |||||||||||||    
T  24516355 ttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattt 24516304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 37850914 - 37850834
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||| ||||||||| |||| || |||||||  |||| || ||||| |||| ||||||||||||| |||||    
T  37850914 tctcaaaataattgtcattttagaatattaattcatcatttat--tattatttcactattatattcttatttattgattttca 37850834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 7348307 - 7348266
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttattg 145  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  7348307 caacatttattat-tttttccactaaaatactcttatttattg 7348266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 7463280 - 7463346
Alignment:
Q  226 agtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||||||  |||||||||||  |||||||||||  |||||||||||||| |||  ||||||||||||    
T  7463280 agtaaatgctactaattttatcattgaaatcaacacaattaatcatttccttaataaccgtgcacaa 7463346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 10042223 - 10042297
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattga 146  Q
    ||||||||||  ||| |||||||||| |||||| | |||||||| ||||  |||| |||||||||||||||||||    
T  10042223 tcaaaataatcttcattttagaatatcaatgcatcgtttattattttttctcactgatatactcttatttattga 10042297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 13906686 - 13906743
Alignment:
Q  118 ttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    ||||||||||  ||||| |||||||||  ||||||||| ||||||||||||||||||||    
T  13906686 ttttccactaccatacttttatttattccatttcactc-atttaactactctactaact 13906743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 30866030 - 30866100
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||| ||||| ||| |||||||| ||  ||||||||||||||||||  || |||||||||    
T  30866030 ttttagtaaatgatattaattataccattgaaattaacacaattaatcatttctttaataatcgtgcacaa 30866100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 33819154 - 33819236
Alignment:
Q  73 tcaaaataattgtcactttagaata-taatgcaacatttatta-tatt-tttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||| ||||  |||||| ||||||||| |||| ||| ||||| ||||| |||||||| |||||||||    
T  33819154 tcaaaataattgtcactttacaataccaatgcagcatttattattattattttcactattatacccttatttaatgaatttca 33819236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 44424085 - 44424166
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||| |||||||| ||||| |||||| |||||||||| ||||| || ||  |||| ||||||||||||| ||||    
T  44424085 tctcaaaataattatcactttaaaatatcaatgcagcatttattat-ttttttcattataatacccttatttattgaacttca 44424166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 83447 - 83500
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||| ||||||||||||| ||  |||||||  ||||||||||||||    
T  83447 gttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttc 83500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 8592507 - 8592450
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    |||||| |||||  ||||||||| || |||||||||||  ||||||||||||||||||    
T  8592507 gttttattaaatactactaatttaaccattgaaatcaacacaattaatcatttcttta 8592450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 22738671 - 22738747
Alignment:
Q  99 aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    |||| |||||||||||| ||||||||||| |||||  ||||||||| |||||||  | | ||||||| ||||||||||    
T  22738671 aatggaacatttattat-tttttccactattatacctttatttattaaatttcatccaacttaactaatctactaact 22738747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 29121472 - 29121548
Alignment:
Q  98 taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaac 175  Q
    |||| ||||||||| ||| |||||||||||| |||  ||||||||||| |||||| || || ||||||||| ||||||    
T  29121472 taatacaacatttactatttttttccactaacataaccttatttattgcatttcaatc-atctaactactccactaac 29121548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 31327374 - 31327415
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttatt 144  Q
    |||||||||||||  ||||||||||| |||||||||||||||    
T  31327374 caacatttattattcttttccactaacatactcttatttatt 31327415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 35016425 - 35016384
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttatt 144  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  35016425 caacatttattacgtttttccactaacatactcttatttatt 35016384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 38391692 - 38391770
Alignment:
Q  71 tctcaaaataattgtcactttagaatataatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| |||||    ||| |||||||| | ||||| || || |||||| |||||||||||||||||    
T  38391692 tctcaaaataattgtcactttataatat----caatatttattatttttttttcattattatacttttatttattgaatttca 38391770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 40076377 - 40076434
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    |||||||||||| ||||||||||||| ||  |||| ||  ||||||||||||||||||    
T  40076377 gttttagtaaatgatactaattttaccatcaaaattaacacaattaatcatttcttta 40076434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 43873985 - 43874042
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    |||||||||||| ||| ||||||||| ||  |||||||  ||||||||||||||||||    
T  43873985 gttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttcttta 43874042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 5524442 - 5524494
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||| |||||  |||||||||||| |||||||||||  |||||||||||||    
T  5524442 gttttattaaatgttactaattttaccattgaaatcaacacaattaatcattt 5524494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 7463152 - 7463259
Alignment:
Q  71 tctcaaaataattgtcactttagaatat--aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||||||||| ||||||||| ||||   |||||| ||||||||||  |||| ||||| | ||   |||||||||||||||||  | | ||||||||||    
T  7463152 tctcaaaataatcgtcactttacaataacaaatgcatcatttattattatttttcactattctatctttatttattgaatttcatccaacttaactactc 7463251  T
Q  169 tactaact 176  Q
     |||||||    
T  7463252 cactaact 7463259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 14063276 - 14063347
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaac 175  Q
    |||||||||||||  ||||||| ||| |||| ||||||||||| |||||| || || ||||||||| ||||||    
T  14063276 caacatttattattattttccattaacatacccttatttattgcatttcaatc-atctaactactccactaac 14063347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 14373304 - 14373375
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaac 175  Q
    |||||||||||||  ||||||| ||| |||| ||||||||||| |||||| || || ||||||||| ||||||    
T  14373304 caacatttattattattttccattaacatacccttatttattgcatttcaatc-atctaactactccactaac 14373375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 30546486 - 30546446
Alignment:
Q  128 atatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||| ||||||||||||||||||||| | ||||||||||    
T  30546486 atatacccttatttattgaatttcactccacttaactactc 30546446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 32018778 - 32018726
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| |||  ||||||||||||||||||||  |||||| |||||||    
T  32018778 ttttagtaaatgatagaaattttactattgaaatcaacacaattattcatttc 32018726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 32526681 - 32526602
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcact 154  Q
    |||||||||||||||||| | ||| ||||||| |||| |||| |||||||| |||| ||   |||||||||||||||||||    
T  32526681 aaaataattgtcactttaaagtattaatgcaatattttttat-tttttccattaatgtatatttatttattgaatttcact 32526602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 38391810 - 38391862
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||||||||| ||||||||||||| ||  |||||||  |||||||||||||    
T  38391810 gttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcattt 38391862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 39308648 - 39308700
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||||||||| ||| ||||||||||||| ||||||| |||  |||||||||    
T  39308648 gttttagtaaataatattaattttactattaaaatcaactcatctaatcattt 39308700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 41496013 - 41496119
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||  |||||||||| |||||  |||||||||| ||||||  | ||||||||||||     
T  41496013 tctcaaaataattgtcactttacaatactaatgcaacatttattattcttttccactattatacctttatttattgcatttcatccaatttaactactcc 41496112  T
Q  170 actaact 176  Q
    |||||||    
T  41496113 actaact 41496119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 6315957 - 6315875
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||||||||||||||  ||||||| || ||||| ||||||||||||||||||    
T  6315957 tctcaaaataattgtcactttagaataccaatgcaacatttattattattttccattattatacccttatttattgaatttca 6315875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 6753836 - 6753732
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 171  Q
    ||||||||||| |||||||||||||  ||||||||||||||||| |||||||| || ||||| |||||||||| |||||||  | | |||||||||| ||    
T  6753836 tcaaaataattatcactttagaataccaatgcaacatttattatctttttccattattatacccttatttattaaatttcatccaacttaactactccac 6753737  T
Q  172 taact 176  Q
    |||||    
T  6753736 taact 6753732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 9515668 - 9515775
Alignment:
Q  73 tcaaaataattgtcactttagaata-taatgcaacatttattat-att--tttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||||||||||||||||| |||| ||||||| |||||||||| |||  ||||||||| |||||||||||||| ||||||||| || | ||||||||||    
T  9515668 tcaaaataattgtcactttacaatactaatgcatcatttattattattattttccactattatactcttatttaatgaatttcattcaacttaactactc 9515767  T
Q  169 tactaact 176  Q
     |||||||    
T  9515768 cactaact 9515775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 19929882 - 19929961
Alignment:
Q  74 caaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||||||||  |||||||||||||||||  ||||||| || ||||| ||||||||||||||||||    
T  19929882 caaaataattgtcactttagaataccaatgcaacatttattattattttccattattatacccttatttattgaatttca 19929961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 1248784 - 1248678
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  |||| || || ||||| |||||| ||||||||| | || | |||||||||      
T  1248784 tctcaaaataattgtcactttagaatatcaatgcaacatttattattatttttcattattatacccttattaattgaattttattcaacttaactacttc 1248685  T
Q  170 actaact 176  Q
    |||||||    
T  1248684 actaact 1248678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 6753962 - 6754068
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||| ||||  |||||||||||| || | ||||||||  ||||||| ||||||||||||||||||  | | ||||||||||     
T  6753962 tctcaaaataattgtcactttataataccaatgcaacattttttttttttttccatcaatatacccttatttattgaatttcatccaacttaactactcc 6754061  T
Q  170 actaact 176  Q
    |||||||    
T  6754062 actaact 6754068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 27542728 - 27542834
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||||| ||||||||||| ||||||| ||| |||||  |||||||| || |||||||||||||||||||||| |  | | ||||||||||     
T  27542728 tctcaaaataattgtgactttagaatactaatgcagcatgtattacttttttccattattatactcttatttattgaattttatccaacttaactactcc 27542827  T
Q  170 actaact 176  Q
    |||||||    
T  27542828 actaact 27542834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 40899851 - 40899957
Alignment:
Q  71 tctcaaaataattgtcactttagaatataat-gcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactc 168  Q
    |||||||||||||||||||||||||||  || ||| ||||||||||  ||||||| || ||||| |||||||||||||||||| ||| | ||||||||||    
T  40899851 tctcaaaataattgtcactttagaataacattgcagcatttattattattttccattattatacccttatttattgaatttca-tctaacttaactactc 40899949  T
Q  169 tactaact 176  Q
     |||||||    
T  40899950 cactaact 40899957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 2588243 - 2588166
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaa 147  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||||||| || ||  |||| |||||||||||||    
T  2588243 tctcaaaataattgtcactttagaatatcaatgcagcatttattttattttttcattataatacccttatttattgaa 2588166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 4440959 - 4441060
Alignment:
Q  76 aaataattgtcactttagaatataatg-caacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaa 174  Q
    ||||||||||||||||| ||||  | | ||||||||||||| |||||| |||| |||||  |||||||||||||||||  | |||||||||||| |||||    
T  4440959 aaataattgtcactttataatacgaggacaacatttattatttttttctactattataccgttatttattgaatttcatccaatttaactactccactaa 4441058  T
Q  175 ct 176  Q
    ||    
T  4441059 ct 4441060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 6616060 - 6615980
Alignment:
Q  71 tctcaaaataattgtcactttagaatata-atgcaacatttattatattttt-ccactaatatactcttatttattgaatt 149  Q
    |||||||||||||||||||||| ||||   |||||||||||||||| ||||| |||||| ||||| |||||||||||||||    
T  6616060 tctcaaaataattgtcactttacaatacctatgcaacatttattattttttttccactattatacccttatttattgaatt 6615980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 11796344 - 11796265
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| |||| ||||| | ||||||||   ||||||||||| |||||||||||||||| |||||||    
T  11796344 tctcaaaataattgtcactttaaaataataatgtagcatttatt---tttttccactagtatactcttatttattaaatttca 11796265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 4818483 - 4818566
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttcc-actaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||  |||| | |||||||||| ||||||| |||| ||||| ||||||||||||||||||    
T  4818483 tctcaaaataattgtcactttataataccaatgtagcatttattatttttttcccactattatacccttatttattgaatttca 4818566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 8698241 - 8698324
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttt-tccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||| |||| |  ||||||||| |||| ||||||| ||||| ||||||||||||||||||    
T  8698241 tctcaaaataattgtcactttacaatatcaatgtagtatttattattttttttccactattatacccttatttattgaatttca 8698324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 8725067 - 8724996
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    |||||||||||| ||| ||||||||| |||||||||||  ||||||||||||||||||  || |||||||||    
T  8725067 gttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttctttaataatcgtgcacaa 8724996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 8725189 - 8725083
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||||||| |||||||||  |||||| || || ||||  |||| || || |||||| ||||||||||||||||| || | ||||||||||     
T  8725189 tctcaaaataattgtcattttagaataacaatgcagcagtttttattatttttcattattatactattatttattgaatttcattcaagttaactactcc 8725090  T
Q  170 actaact 176  Q
    |||||||    
T  8725089 actaact 8725083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 15439376 - 15439306
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||||||||||||| |||||||| ||| |||||||||||||| ||| | | |||||||||    
T  15439376 ttttagtaaatgatactaattttaccattgaaattaatacaattaatcatttccttaaatatcgtgcacaa 15439306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 37184136 - 37184066
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||| ||||||||| ||||||||||| |||||||||||||| |||| ||| | |||||||    
T  37184136 ttttagtaaatgatattaattttaccattgaaatcaactcaattaatcatttttttaaaaatcttgcacaa 37184066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 21060569 - 21060669
Alignment:
Q  76 aaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaa 174  Q
    ||||||||||||||||||||||| |||||| |||||||| || ||||||| || |||||  ||||||||||||||| |  | | |||||||||| |||||    
T  21060569 aaataattgtcactttagaatatcaatgcatcatttatttta-ttttccattattataccattatttattgaattttatccaacttaactactccactaa 21060667  T
Q  175 ct 176  Q
    ||    
T  21060668 ct 21060669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 40616552 - 40616483
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttat 139  Q
    |||||||| | ||||||||||||||||| |||  |||||||||||||||||||||| |||||||| ||||    
T  40616552 tctcaaaaaagttgtcactttagaatattaataaaacatttattatatttttccaccaatatacttttat 40616483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 26663023 - 26662983
Alignment:
Q  123 cactaatatactcttatttattgaatttcactctatttaac 163  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  26663023 cactaatatacttttatttattgaatttcactctatttaac 26662983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 26934618 - 26934578
Alignment:
Q  123 cactaatatactcttatttattgaatttcactctatttaac 163  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  26934618 cactaatatacttttatttattgaatttcactctatttaac 26934578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 9515801 - 9515852
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatt 272  Q
    |||||||||||| ||||||||||||| |||||||||||  ||||||||||||    
T  9515801 gttttagtaaatgatactaattttaccattgaaatcaacacaattaatcatt 9515852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 24455130 - 24455056
Alignment:
Q  79 taattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactc 155  Q
    |||||||||| ||||||||| ||| |||||||||||||   |||| ||||||||| ||||||||||| ||||||||||    
T  24455130 taattgtcacattagaatatcaatacaacatttattat---tttcgactaatatagtcttatttattaaatttcactc 24455056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 3348310 - 3348228
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||| |||||||| ||  |||  ||||||||||||| ||||    
T  3348310 tctcaaaataattgtcattttagaataccaatgcagcatttattatttttttccattataatatccttatttattgaacttca 3348228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 42803800 - 42803718
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||| |||| | || ||||||| |||||||||| || ||  | || ||||||||||||||||||||||||    
T  42803800 tctcaaaataattgtcattttacagtactaatgcatcatttattattttcttttaatattatactcttatttattgaatttca 42803718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 31655112 - 31655165
Alignment:
Q  225 tagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    |||||||| ||| ||||||||| |||||||||||  ||||||||||||||||||    
T  31655112 tagtaaatgatattaattttaccattgaaatcaacacaattaatcatttcttta 31655165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 40530403 - 40530322
Alignment:
Q  73 tcaaaataattgtcactttagaata-taatgcaacatttattatat-ttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||| ||||  |||||| |||||||||| | ||| |||||| ||||| |||||||||| |||||||    
T  40530403 tcaaaataattgtcactttacaataccaatgcagcatttattatttatttcccactattatacccttatttatttaatttca 40530322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 41062339 - 41062263
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaa 147  Q
    ||||||||||||| | |||||||||||  ||||||||||||||||| |||||||| ||  |||| |||||||||||||    
T  41062339 tctcaaaataattataactttagaataccaatgcaacatttattat-tttttccattataatacccttatttattgaa 41062263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 8698379 - 8698435
Alignment:
Q  236 actaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| |||||||||||  ||||||||||||||||||  || |||||||||    
T  8698379 actaattttaccattgaaatcaacacaattaatcatttctttaataatcgtgcacaa 8698435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 27580656 - 27580708
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| ||| ||||||||| |||||||||||  ||||||||||||||    
T  27580656 ttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttc 27580708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 40530282 - 40530230
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||||  |||||||||||| |||||||||||  |||||||||||||    
T  40530282 gttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattt 40530230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 4818606 - 4818677
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||||  |||||||||||| |||||||||||  |||||||| ||||| |||  || |||||||||    
T  4818606 gttttagtaaatgctactaattttacaattgaaatcaacacaattaattatttccttaataatcgtgcacaa 4818677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 29374322 - 29374381
Alignment:
Q  117 tttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    ||||| ||||| ||||| |||||||||||||||| | || |||||||||||| |||||||    
T  29374322 ttttttcactattatacccttatttattgaattttattcaatttaactactccactaact 29374381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 1248661 - 1248591
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||| ||||||||| |||||||||||   ||||||| ||||| |||  ||||||||||||    
T  1248661 ttttagtaaatgatattaattttaccattgaaatcaacataattaataatttccttaataaccgtgcacaa 1248591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 15818662 - 15818564
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    ||||||||||| |||||||||| ||||  ||||||||||| ||||  | ||||||||| ||| |  ||||||||| |||||||  | ||||||||||||    
T  15818662 tctcaaaataactgtcactttacaataccaatgcaacattaattacttgtttccactattatgcctttatttattaaatttcatccaatttaactactc 15818564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 30512740 - 30512690
Alignment:
Q  224 ttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||| ||  ||||||||| |||||||||||| ||||||||||||||    
T  30512740 ttagtaaatgatgttaattttaccattgaaatcaatacaattaatcatttc 30512690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 30553080 - 30553030
Alignment:
Q  224 ttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||| ||  ||||||||| |||||||||||| ||||||||||||||    
T  30553080 ttagtaaatgatgttaattttaccattgaaatcaatacaattaatcatttc 30553030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 32440197 - 32440267
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||| ||||||||  |||||||| ||  |||||||||||||||||| ||| | |||||||    
T  32440197 ttttagtaaatgatattaattttatcattgaaattaacacaattaatcatttctttaaaaatcatgcacaa 32440267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 2232210 - 2232145
Alignment:
Q  109 ttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaa 174  Q
    ||||||| |||||| |||| ||||| ||||||||||||||||||  | | |||||||||| |||||    
T  2232210 ttattatttttttctactattatacccttatttattgaatttcatccaacttaactactccactaa 2232145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 7330441 - 7330521
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    ||||||||||||| ||| |||| ||||| ||||||||||| ||||| |||||| | ||||||||  |||| |||| |||||    
T  7330441 tctcaaaataattatcattttaaaatatcaatgcaacattaattatttttttctagtaatatacctttatgtattaaattt 7330521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 11904262 - 11904310
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatca 270  Q
    ||||||||||| ||| |||||||| ||||||| ||||| ||||||||||    
T  11904262 ttttagtaaatgatattaattttattattgaactcaatacaattaatca 11904310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 40899973 - 40900041
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgca 289  Q
    |||||||||||| ||||||||||| | ||  |||||||  |||||||||||||| |||  |||||||||    
T  40899973 gttttagtaaatgatactaattttgccatcaaaatcaacacaattaatcatttccttaataaccgtgca 40900041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 41478733 - 41478800
Alignment:
Q  88 ctttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||| |||||||||||||||||   |||||| |||| |||||  |||||||||||||||||    
T  41478733 ctttagaatatcaatgcaacatttattattattttttctactattatacctttatttattgaatttca 41478800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 41480099 - 41480166
Alignment:
Q  88 ctttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||| |||||||||||||||||   ||||| ||||| |||||  |||||||||||||||||    
T  41480099 ctttagaatatcaatgcaacatttattattatttttttcactattatacctttatttattgaatttca 41480166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 42803678 - 42803622
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttt 277  Q
    ||||||||||||  |||||||||||| |||||||| ||  |||||||| ||||||||    
T  42803678 gttttagtaaatactactaattttacaattgaaatgaacacaattaattatttcttt 42803622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 42617091 - 42616993
Alignment:
Q  71 tctcaaaataattgtcactttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    ||||||||||||||||||||||||||| || |||||||||||||||  ||||||| || ||||| |||||||||||||||||| || | ||||||||||    
T  42617091 tctcaaaataattgtcactttagaatacaaatgcaacatttattattattttccattattatacacttatttattgaatttcattcgacttaactactc 42616993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 51624719 - 51624825
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||  |||| ||||||||||||||||||  | | ||||||||||     
T  51624719 tctcaaaataattgtcactttacaatatcaatgtaacatttattatttttttccactatcatacccttatttattgaatttcatccaacttaactactcc 51624818  T
Q  170 actaact 176  Q
    |||||||    
T  51624819 actaact 51624825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 28911340 - 28911262
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||  |||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  28911340 aaaataattgtcgatttagaatatcaatgcaacatttattatttttttccattattatactcttatttattgaatttca 28911262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 49428529 - 49428448
Alignment:
Q  71 tctcaaaataattgtcactttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||   ||||||||||||||||  |||||||| || ||||| ||||||||||||||||||    
T  49428529 tctcaaaataattgtcactttagaaatcaatgcaacatttattacttttttccattattatacccttatttattgaatttca 49428448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 49746895 - 49747000
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactcta 170  Q
    |||||||||||||||||||| ||||  ||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||  | | |||||||||| |    
T  49746895 tcaaaataattgtcactttacaataccaatgcaacatttattattatttttccattattatacccttatttattgaatttcatccaacttaactactcaa 49746994  T
Q  171 ctaact 176  Q
    ||||||    
T  49746995 ctaact 49747000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 16821516 - 16821413
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactctact 172  Q
    |||||||||||||||||||||||  |||||| |||||||||| |||||| ||||| ||||| |||||||||||||||||| || | |||| ||||| |||    
T  16821516 aaaataattgtcactttagaataccaatgcagcatttattattatttttgcactattatacccttatttattgaatttcattcaacttaaatactccact 16821417  T
Q  173 aact 176  Q
    ||||    
T  16821416 aact 16821413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 35380522 - 35380439
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||| ||||| ||| || ||||||||||||||||||||||||    
T  35380522 tctcaaaataattgtcactttataataccaatgcaacatttattattttttttccattattatactcttatttattgaatttca 35380439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 2653357 - 2653451
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||| ||||||||||||||||| ||||||||||||||||| |||||||| || |||||  ||||||||| |||||||  | ||||||||||||    
T  2653357 aaaatagttgtcactttagaatatcaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaatttaactactc 2653451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 47773207 - 47773101
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| |||||||| ||  |||| ||||||||||||| ||||  | | ||||||||||     
T  47773207 tctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccattataatacccttatttattgaacttcatccaacttaactactcc 47773108  T
Q  170 actaact 176  Q
    |||||||    
T  47773107 actaact 47773101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 49176123 - 49176042
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatattttt-ccactaatatactcttatttattgaattt 150  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||| ||||| |||||| ||||| ||||||||||||||||    
T  49176123 tctcaaaataattgtcactttagaataccaatgcaacaattattatttttttcccactattatacccttatttattgaattt 49176042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 34360710 - 34360781
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||||  |||||||||||| |||||||||||| ||||||||||||||||||  || |||||||||    
T  34360710 gttttagtaaatgctactaattttaccattgaaatcaatacaattaatcatttctttaataatcgtgcacaa 34360781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 38405291 - 38405208
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||||||||||||| | |||||||| || |||||  |||||||||||||||||    
T  38405291 tctcaaaataattgtcactttagaatagcaatgcaacatttattactttttttccattattatacctttatttattgaatttca 38405208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 5841616 - 5841534
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||   |||||| || |||||  |||||||||||||||||    
T  5841616 tctcaaaataattgtcactttagaatatcaatgcatcatttattattaatttccattattatacctttatttattgaatttca 5841534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 7061852 - 7061770
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||| |||||| ||||| ||| ||||||||||||| | ||| ||||| ||||| ||||||||||||||||||    
T  7061852 tctcaaaataattgttactttaaaatatcaatacaacatttattatttattttcactattatacccttatttattgaatttca 7061770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 30682380 - 30682278
Alignment:
Q  76 aaataattgtcactttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    |||||||||||||||||||| || |||| | |||||||||| |||||| || || ||| || ||||||||||||||||| || | |||||||||||||||    
T  30682380 aaataattgtcactttagaaaatcaatgtagcatttattattattttttcattattatgcttttatttattgaatttcattcaaattaactactctacta 30682281  T
Q  174 act 176  Q
    |||    
T  30682280 act 30682278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 6609694 - 6609776
Alignment:
Q  75 aaaataattgtcactttagaata----taatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||    |||||||||||||||||| ||||| ||| || |||||||||||||||||| |||||    
T  6609694 aaaataattgtcactttagaatactactaatgcaacatttattattttttttccattattatactcttatttattgagtttca 6609776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 6643846 - 6643766
Alignment:
Q  72 ctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||||| ||| | || ||| |||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  6643846 ctcaaaataattgtcactttacaatttcaacgcagcatttatt-tatttttccactattatacccttatttattgaatttca 6643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 21240888 - 21240786
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||| |||||||||||||||| ||||||||||||||     ||||||| || ||||| ||||||||||||||||||  | | ||||||||||     
T  21240888 tctcaaaataaatgtcactttagaatatcaatgcaacatttata----ttttccattattatacccttatttattgaatttcatccaacttaactactca 21240793  T
Q  170 actaact 176  Q
    |||||||    
T  21240792 actaact 21240786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 30260992 - 30261041
Alignment:
Q  125 ctaatatactcttatttattgaatttcactctatttaactactctactaa 174  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  30260992 ctaatatagtcttatttattgaatttcactctacttaactactctactaa 30261041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 19265744 - 19265847
Alignment:
Q  76 aaataattgtcactttagaata-taatgcaacatttattatatttttcca--ctaatatactcttatttattgaatttcactctatttaactactctact 172  Q
    |||||||||||||||||||||| |||||||||||||| ||| ||||||||   || || || |||| ||||||||||||| || | |||||||||| |||    
T  19265744 aaataattgtcactttagaatactaatgcaacatttagtatttttttccattatattacacccttaattattgaatttcattcaacttaactactccact 19265843  T
Q  173 aact 176  Q
    ||||    
T  19265844 aact 19265847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 25233115 - 25233167
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttc 122  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  25233115 tctcaaaataattgtcactttagaatatcaatgcaacatttattatttttttc 25233167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 46385448 - 46385516
Alignment:
Q  98 taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactac 166  Q
    |||||||||||||||| ||||||| || |||||||| |||||||||||||||| |||| | ||||||||    
T  46385448 taatgcaacatttattttattttttcattaatatacccttatttattgaattttactcaacttaactac 46385516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 4972506 - 4972587
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||| |||||||||| ||||  |||| |||||||||||| |||||| |||| ||||| ||||||||||||||||||    
T  4972506 tctcaaaataactgtcactttacaataccaatgtaacatttattatttttttc-actattatacacttatttattgaatttca 4972587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 11907787 - 11907705
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| |||||||| ||  ||||  |||||||||||| ||||    
T  11907787 tctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccattataatacatttatttattgaacttca 11907705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 34360592 - 34360694
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 173  Q
    |||||||||||||||||| ||||  |||  ||||||| || | ||||||||||| ||||| |||||||||||||||| | || | |||||||||| ||||    
T  34360592 aaaataattgtcactttacaataccaatttaacattttttttttttttccactattatacccttatttattgaattttattcaacttaactactccacta 34360691  T
Q  174 act 176  Q
    |||    
T  34360692 act 34360694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 36985719 - 36985801
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||| |||||||||| |||| | |||||| | | ||||||||| | ||||| ||||||||||||||||||    
T  36985719 tctcaaaataattgtcagtttagaatatcaatgaagcatttactgtttttttccaccattatacccttatttattgaatttca 36985801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 52859982 - 52859881
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||| ||| || ||||| |     |||||||||||| || | ||||||||||     
T  52859982 tctcaaaataattgtcactttagaataccaatgcaacatttattattttttcccattattataccc-----tattgaatttcattcaacttaactactcc 52859888  T
Q  170 actaact 176  Q
    |||||||    
T  52859887 actaact 52859881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 3689617 - 3689674
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    |||||||||||| ||||||||||||| ||  |||||||| ||||||||||||||||||    
T  3689617 gttttagtaaatgatactaattttaccatcaaaatcaatacaattaatcatttcttta 3689674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 28501073 - 28500989
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatattttt--ccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||| ||||||||||  ||| ||||||||||||| |||||  ||| || ||||| ||||||||||||||||||    
T  28501073 tctcaaaataattgtctctttagaataccaatacaacatttattattttttttcccattattatacccttatttattgaatttca 28500989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 35311413 - 35311329
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattat--atttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||   |||||||| || |||||  |||||||||||||||||    
T  35311413 tctcaaaataattgtcactttacaataccaatgcaacatttattattattttttccaatattatacctttatttattgaatttca 35311329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 26147806 - 26147727
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacattta--ttatatttttccactaatatactcttatttattgaa 147  Q
    |||||||||||||||||||||||||||  ||| |||||||||  |||| |||||||| || ||||| |||||||||||||    
T  26147806 tctcaaaataattgtcactttagaataccaatacaacatttattttatttttttccattattatacccttatttattgaa 26147727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 36985842 - 36985894
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||    
T  36985842 ttttagtaaatgatactaattttaccattgaaatcaacacaattaatcatttc 36985894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 22129975 - 22130058
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||| ||||| ||| || |||||  |||||||||||||||||    
T  22129975 tctcaaaataattgtcattttacaataccaatgcaacatttattattttttttccattattatacctttatttattgaatttca 22130058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 6643726 - 6643673
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||||  |||||||||||| |||||||||||  ||||||||||||||    
T  6643726 gttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttc 6643673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 7061726 - 7061677
Alignment:
Q  225 tagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||||    
T  7061726 tagtaaatgatactaattttaccattgaaatcaacacaattaatcatttc 7061677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 7986914 - 7987012
Alignment:
Q  76 aaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaa 174  Q
    |||||||| |||||||| ||||| |||| |||| |||||||||||| ||  || |||||| ||||||||| ||||||| |  | ||||||||||||||||    
T  7986914 aaataattatcactttaaaatatcaatgtaacacttattatattttccc--tattatacttttatttatttaatttcattaaacttaactactctactaa 7987011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 17237447 - 17237378
Alignment:
Q  107 atttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 176  Q
    ||||||||  ||||||||||| ||||| ||||||||||||||||||  | | |||||||||| |||||||    
T  17237447 atttattagttttttccactattatacccttatttattgaatttcatccaacttaactactccactaact 17237378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 17512524 - 17512435
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttat-ttattgaatttcactctatttaa 162  Q
    ||||||||||||| |||| ||||| |||| || ||||||||| ||||||||||||||| | ||||| ||||||||||  |||||| ||||    
T  17512524 aaaataattgtcattttaaaatatgaatgtaatatttattatttttttccactaatatgcacttatattattgaattcaactctacttaa 17512435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 44536381 - 44536302
Alignment:
Q  75 aaaataattgtcactttagaata-taatgcaacatttattatat--ttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||| |||| ||||||| |||||||| |||  |||||||||| ||||| ||||||| ||||||||||    
T  44536381 aaaataattgtcactttacaatactaatgcagcatttattttattcttttccactattatacccttattt-ttgaatttca 44536302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 52247611 - 52247510
Alignment:
Q  75 aaaataattgtcactttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaa 174  Q
    |||||||||||||||||| ||   |||  ||||||||||||  |||||||  | ||||| |||||||| ||||||||| || | |||||||||| |||||    
T  52247611 aaaataattgtcactttacaaaccaatagaacatttattattcttttccatcattatacacttatttaatgaatttcattcaacttaactactccactaa 52247512  T
Q  175 ct 176  Q
    ||    
T  52247511 ct 52247510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 9301469 - 9301545
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    ||||||||||||| |||||||||| |||| |   ||||||||  |||| |||||||||| |||||||||||||||||    
T  9301469 aaaataattgtcattttagaatatcaatgtattgtttattattatttttcactaatataatcttatttattgaattt 9301545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 42616968 - 42616912
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    ||||||||||| ||| ||||||||| |||||||||||  || |||||||||||||||    
T  42616968 ttttagtaaatgatattaattttaccattgaaatcaacacagttaatcatttcttta 42616912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 47464430 - 47464378
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||  |||||||||||| |||||||||||  ||||||||||||||    
T  47464430 ttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttc 47464378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 49428407 - 49428355
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||||||| ||||||||| |||||||||||  ||| ||||||||||    
T  49428407 ttttagtaaattatattaattttaccattgaaatcaacacaaataatcatttc 49428355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 51625138 - 51625190
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||||  |||||||||||| |||||||||||  |||||||||||||    
T  51625138 gttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattt 51625190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 462014 - 462065
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||| ||| || |||||| |||||||||||| |||||||||||||    
T  462014 ttttagtaaataatattacttttaccattgaaatcaatacaattaatcattt 462065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 2066724 - 2066804
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||| | |||||||  ||||||| || || |||||  |||||||||||||||||    
T  2066724 tctcaaaataattgtcactttagaataccaatgaagcatttat--tattttttcattattatacctttatttattgaatttca 2066804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 2653476 - 2653527
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||| ||||| ||||||||||||| |||||||||||  |||||||||||||    
T  2653476 ttttaataaatgatactaattttacaattgaaatcaacacaattaatcattt 2653527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 3689499 - 3689577
Alignment:
Q  71 tctcaaaataattgtcactttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||| ||||||||||||| ||||||   ||||||||||||||  ||||||| || ||||| |||||| ||| |||||||    
T  3689499 tctcaaagtaattgtcactttggaatat---gcaacatttattattattttccattattatacccttattaatttaatttca 3689577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 313
Target Start/End: Complemental strand, 4744801 - 4744710
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaactctaaatcgaatattaaaat 313  Q
    |||| |||||||||||||||||| | ||| |||||||||||| | | |||||||||   |||||  |||||||||| | ||| |||||||||    
T  4744801 tttttgtaaattatactaatttttccattaaaatcaattcaactgaacatttctttgataaccgcacacaactctataacgactattaaaat 4744710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 11288695 - 11288644
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||| ||| ||||||| | |||||||||||| |||||||||||||    
T  11288695 ttttagtaaatgatattaattttgccattgaaatcaatacaattaatcattt 11288644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 53412044 - 53412123
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttc-cactaatatactcttatttattgaatttca 152  Q
    ||||||||||||| |||||||||  |||| ||||| |||||| |||||  ||||| |||||| |||||||||||||||||    
T  53412044 aaaataattgtcattttagaataccaatgtaacatctattatttttttttcactattatacttttatttattgaatttca 53412123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 53412164 - 53412211
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatc 269  Q
    ||||||||||| ||||||||||||| ||||||||||||  ||||||||    
T  53412164 ttttagtaaatgatactaattttaccattgaaatcaataaaattaatc 53412211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 2158059 - 2158013
Alignment:
Q  228 taaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||| ||||||||||||  |||||||||||||||||||||| ||||    
T  2158059 taaatgatactaattttatcattgaaatcaattcaattaatcgtttc 2158013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 3171503 - 3171581
Alignment:
Q  76 aaataattgtcactttagaata-taatgcaacatttattatatttttc-cactaatatactcttatttattgaatttca 152  Q
    |||||||| ||||||||||||| ||||| ||   |||| ||||||||  |||||||||||| |||||||||||||||||    
T  3171503 aaataattatcactttagaatactaatgtaattattataatatttttttcactaatatacttttatttattgaatttca 3171581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 28500956 - 28500886
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||| ||| ||||||||| |||||||||||  |||| ||||||||| |||  || |||||||||    
T  28500956 ttttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaa 28500886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 40123039 - 40122961
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttc 151  Q
    ||||||||| |||||||| ||||  ||||||||||||||||| ||||| |||| | | ||| |||||||||||||||||    
T  40123039 aaaataattatcactttacaataccaatgcaacatttattatttttttcccaccattgtacccttatttattgaatttc 40122961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 2942711 - 2942654
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    ||||||||||||  |||||||||||  || ||||||||  ||||||||||||||||||    
T  2942711 gttttagtaaatgctactaattttatcatcgaaatcaacacaattaatcatttcttta 2942654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 11907665 - 11907612
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||| ||||||||||||| ||  |||||||  ||||||||||||||    
T  11907665 gttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttc 11907612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 12728784 - 12728836
Alignment:
Q  99 aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||| ||||| |||||||||||| ||||| |||||||||| ||||||    
T  12728784 aatgcaacattaattat-tttttccactaaaatactattatttattggatttca 12728836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 17114495 - 17114548
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||| ||||||||||||| ||  |||||||  ||||||||||||||    
T  17114495 gttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttc 17114548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 20612237 - 20612180
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttcttta 278  Q
    |||||||||||||||||||| ||||  | ||||||||| |||| ||||||||| ||||    
T  20612237 gttttagtaaattatactaactttagcaatgaaatcaactcaactaatcattttttta 20612180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 43237202 - 43237258
Alignment:
Q  98 taatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||   ||||| ||||| ||||| ||||||||||||||||||    
T  43237202 taatgcaacatttattattatttttttcactattatacacttatttattgaatttca 43237258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 49579363 - 49579284
Alignment:
Q  72 ctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||||| ||||| ||||||| |||| |||| |||||  |||| || | |||||||||||||||||||    
T  49579363 ctcaaaataattgtcactttaaaatatcaatgcaatattt-ttat-tttttttactagtacattcttatttattgaatttca 49579284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 50442958 - 50443007
Alignment:
Q  103 caacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||  ||||||||||| |||| ||||||||||| ||||||    
T  50442958 caacatttattattcttttccactaacatacccttatttattgcatttca 50443007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 50872370 - 50872329
Alignment:
Q  104 aacatttattatatttttccactaatatactcttatttattg 145  Q
    |||||| ||||| ||||||||||||||||| |||||||||||    
T  50872370 aacattcattatctttttccactaatatacccttatttattg 50872329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 52859865 - 52859812
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||| ||||||||||||| ||  |||||||  ||||||||||||||    
T  52859865 gttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttc 52859812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 5618483 - 5618562
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||| ||||| |||||| |||||||| ||||||| || || ||||   || ||||||||||||||    
T  5618483 tcaaaataattgtcactttaaaatatcaatgcagcatttatt-tattttttcattattataactttttttattgaatttca 5618562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 8175777 - 8175734
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttatta 114  Q
    |||||||||| |||||||||||||||| |||||||||||||||||    
T  8175777 tctcaaaata-ttgtcactttagaatattaatgcaacatttatta 8175734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 20612313 - 20612277
Alignment:
Q  116 atttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  20612313 atttttccattaatatactattatttattgaatttca 20612277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 32470014 - 32469962
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    |||||| ||||| ||||||||||||| ||| |||||||  |||||||||||||    
T  32470014 gttttaataaatgatactaattttaccattaaaatcaacacaattaatcattt 32469962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 43237299 - 43237351
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    |||||||||||  |||||||||||| |||||||| ||  ||||||||||||||    
T  43237299 ttttagtaaatattactaattttaccattgaaataaacacaattaatcatttc 43237351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 46396949 - 46396897
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcattt 273  Q
    ||||||||||||  || ||||||||| |||||||||||  |||||||||||||    
T  46396949 gttttagtaaatgctattaattttaccattgaaatcaacacaattaatcattt 46396897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 46397055 - 46396979
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    ||||||||||||||||||  |||  ||| ||||||||||||  |||||||| || ||||| |||||||| |||||||    
T  46397055 aaaataattgtcactttacgatacgaatacaacatttattagttttttccattattatacccttatttaatgaattt 46396979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 54202133 - 54202211
Alignment:
Q  75 aaaataattgtcactttagaata--taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||  |||||||||  |||  ||||||||||||| |||||| |||  |||| |||||||||||||||||||    
T  54202133 aaaataattgtccatttagaatacataacacaacatttattat-tttttctactgttatattcttatttattgaatttca 54202211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 50139 - 50243
Alignment:
Q  73 tcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 171  Q
    |||||||||||||||||||||||||| |||||| ||||||||||  |||| ||||| ||||| |||||||||| ||||||| || | |||| ||||| ||    
T  50139 tcaaaataattgtcactttagaatatcaatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccac 50238  T
Q  172 taact 176  Q
    |||||    
T  50239 taact 50243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 22281 - 22360
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaattt 150  Q
    ||||||||||||| |||||||| ||||   || ||||||||||||| ||||| ||||| ||||  ||||||||||||||||    
T  22281 tctcaaaataattatcactttacaataccgatacaacatttattat-ttttttcactattatatccttatttattgaattt 22360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 34200 - 34119
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||| ||||||||||| |||||  |||||||||||||||||    
T  34200 tctcaaaataattgtcactttacaatatcaatgcatcatttattat-tttttccactattataccattatttattgaatttca 34119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 34079 - 34008
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttagaaaccgtgcacaa 292  Q
    ||||||||||||   |||||||||||||||||| ||||| |||||||||||||| |||  || |||||||||    
T  34079 gttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataatcgtgcacaa 34008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 252985 - 252888
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 168  Q
    |||||||| ||||||||||||| ||||  ||||||||||||||||| |||||| | || |||||||||||||||||||||||| || | ||||||||||    
T  252985 tctcaaaaaaattgtcactttataataccaatgcaacatttattatttttttc-attattatactcttatttattgaatttcattcaacttaactactc 252888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 42813 - 42894
Alignment:
Q  73 tcaaaataattgtcactttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcact 154  Q
    ||||||||||||| |||||| ||||| ||||||||||| |||| |||  || |||||||||  |||||||||||||||||||    
T  42813 tcaaaataattgttactttaaaatatcatgcaacatttgttatttttcccctctaatatacatttatttattgaatttcact 42894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 42932 - 42985
Alignment:
Q  221 gttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||| ||| |||| |||||||||||||||||| ||||||  ||||||||||    
T  42932 gttttagcaaaatatattaattttactattgaaattaattcatctaatcatttc 42985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 864 - 784
Alignment:
Q  72 ctcaaaataattgtcactttagaatataat-gcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||||||||| ||||  || |||||||| | ||| ||||||||||| ||||| ||||||||||||||||||    
T  864 ctcaaaataattgtcactttacaataccattgcaacattgaatat-tttttccactattatacccttatttattgaatttca 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 8164 - 8081
Alignment:
Q  71 tctcaaaataattgtcactttagaata-taatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 152  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| ||||| ||| ||  |||| ||||||||||||| ||||    
T  8164 tctcaaaataattgtcactttagaataccaatgcagcatttattatttttttcccattataatacccttatttattgaacttca 8081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 5325 - 5429
Alignment:
Q  71 tctcaaaataattgtcactttagaat-ataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 169  Q
    ||||||||||||||| ||||||||||   ||| ||||||||||||| |||||||| | ||||||  |||||||||||||||||  | | ||||||||||     
T  5325 tctcaaaataattgttactttagaatgccaatacaacatttattat-tttttcca-ttatatacctttatttattgaatttcatccaacttaactactcc 5422  T
Q  170 actaact 176  Q
    |||||||    
T  5423 actaact 5429  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 76229 - 76307
Alignment:
Q  75 aaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||||| || ||||| ||||||  ||||||||| |||||  |||| ||||| ||||||||||||||||||    
T  76229 aaaataattgtcactctataatatcaatgcagtatttattattttttttgactattatacccttatttattgaatttca 76307  T

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Target: scaffold0294 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 16972 - 17050
Alignment:
Q  71 tctcaaaataattgtcactttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 152  Q
    ||||||||||||| |||||||| ||||| |||||| ||||| ||    |||||||||| |||| | |||||||||||||||||    
T  16972 tctcaaaataattatcactttataatatcaatgcagcatttttt----ttttccactattataattttatttattgaatttca 17050  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 6793 - 6845
Alignment:
Q  222 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttc 274  Q
    ||||||||||| ||||||||||||  |||||||| ||  ||||||||||||||    
T  6793 ttttagtaaataatactaattttatcattgaaattaaaacaattaatcatttc 6845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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