View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19512_low_8 (Length: 242)
Name: NF19512_low_8
Description: NF19512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19512_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 228
Target Start/End: Complemental strand, 49252335 - 49252125
Alignment:
| Q |
18 |
attaaaatgccaattcccaccatgttgtgagtgtgacaaaaagaggcatcaatattgcatttcataaaattggctctgggtttgatccaagcatctttca |
117 |
Q |
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| T |
49252335 |
attaaaatgccaattcccaccatgttgtgagtgtgacaaaaagaggcatcaatattgcatttcataaaattggctctgggtttgatccaagcatctttca |
49252236 |
T |
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| Q |
118 |
tgattgttttacatgaataatcaacctaatagtattaactataatttatagaataatttaatacatttagtattattttgcatcgatacattcaatgttt |
217 |
Q |
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| T |
49252235 |
tgattgttctacattaataatcaacctaatagtattaactataatttatagaataatttaatacatttagtattattttgcatcgatacattcagtgttt |
49252136 |
T |
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| Q |
218 |
aaaagtattat |
228 |
Q |
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||||||||||| |
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| T |
49252135 |
aaaagtattat |
49252125 |
T |
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