View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19513_high_1 (Length: 942)

Name: NF19513_high_1
Description: NF19513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19513_high_1
NF19513_high_1
[»] chr8 (42 HSPs)
chr8 (1-928)||(1423305-1424212)
chr8 (331-474)||(1977210-1977353)
chr8 (311-467)||(24055942-24056098)
chr8 (335-468)||(8903858-8903991)
chr8 (331-474)||(16983394-16983537)
chr8 (334-432)||(8914813-8914911)
chr8 (331-429)||(17499270-17499368)
chr8 (338-432)||(35797437-35797531)
chr8 (331-474)||(28413906-28414049)
chr8 (339-427)||(9952802-9952890)
chr8 (337-469)||(32072102-32072234)
chr8 (331-474)||(34861229-34861365)
chr8 (331-474)||(43506538-43506678)
chr8 (311-384)||(6098794-6098867)
chr8 (333-474)||(35151768-35151909)
chr8 (331-474)||(5979880-5980022)
chr8 (341-426)||(17741574-17741659)
chr8 (2-113)||(10711976-10712088)
chr8 (340-432)||(23685173-23685265)
chr8 (336-432)||(45246476-45246572)
chr8 (337-432)||(31301157-31301251)
chr8 (341-469)||(11962729-11962856)
chr8 (311-414)||(36804856-36804959)
chr8 (331-465)||(41727439-41727573)
chr8 (331-384)||(7493379-7493432)
chr8 (341-432)||(4674952-4675039)
chr8 (331-469)||(6387568-6387705)
chr8 (331-406)||(14236406-14236481)
chr8 (341-427)||(4319780-4319866)
chr8 (349-419)||(9192056-9192126)
chr8 (366-432)||(35689522-35689588)
chr8 (364-429)||(1961327-1961392)
chr8 (311-360)||(5095777-5095826)
chr8 (331-427)||(13407360-13407457)
chr8 (344-413)||(34952504-34952573)
chr8 (365-469)||(43026298-43026400)
chr8 (341-429)||(9193427-9193515)
chr8 (53-113)||(44420639-44420699)
chr8 (365-432)||(1205869-1205936)
chr8 (331-417)||(25915086-25915175)
chr8 (341-408)||(35819198-35819265)
chr8 (53-102)||(16985659-16985708)
[»] chr2 (41 HSPs)
chr2 (745-927)||(2816830-2817012)
chr2 (497-684)||(2816572-2816752)
chr2 (311-432)||(44274276-44274397)
chr2 (333-432)||(9470123-9470222)
chr2 (331-474)||(26767798-26767941)
chr2 (311-469)||(6980137-6980295)
chr2 (331-474)||(12989191-12989334)
chr2 (311-474)||(45554567-45554722)
chr2 (311-427)||(25238294-25238411)
chr2 (319-468)||(34142164-34142313)
chr2 (335-406)||(7919311-7919382)
chr2 (333-432)||(19639135-19639234)
chr2 (333-432)||(19837728-19837827)
chr2 (331-464)||(35316438-35316569)
chr2 (364-464)||(2476546-2476644)
chr2 (331-432)||(11539465-11539569)
chr2 (323-427)||(12098895-12099000)
chr2 (335-415)||(38464222-38464302)
chr2 (331-410)||(10981582-10981661)
chr2 (340-474)||(18511255-18511389)
chr2 (323-395)||(472192-472264)
chr2 (311-469)||(16719447-16719605)
chr2 (325-427)||(30849284-30849386)
chr2 (341-431)||(32701513-32701603)
chr2 (341-427)||(37652292-37652378)
chr2 (341-465)||(17188076-17188198)
chr2 (331-474)||(32856172-32856319)
chr2 (331-464)||(36471875-36472008)
chr2 (331-379)||(4552877-4552925)
chr2 (5-108)||(25476329-25476432)
chr2 (319-381)||(14489564-14489626)
chr2 (339-405)||(15884498-15884564)
chr2 (40-113)||(17508848-17508921)
chr2 (331-427)||(43414402-43414498)
chr2 (331-432)||(28898073-28898175)
chr2 (391-432)||(41805873-41805914)
chr2 (331-469)||(24895303-24895440)
chr2 (311-361)||(25730456-25730506)
chr2 (341-379)||(30718374-30718412)
chr2 (335-432)||(42182931-42183029)
chr2 (53-113)||(38500219-38500282)
[»] chr3 (53 HSPs)
chr3 (331-474)||(41451932-41452075)
chr3 (331-474)||(24734705-24734848)
chr3 (331-474)||(28529253-28529394)
chr3 (331-474)||(20493482-20493625)
chr3 (331-474)||(37776740-37776883)
chr3 (331-474)||(46450067-46450209)
chr3 (331-474)||(46160949-46161090)
chr3 (331-430)||(29588770-29588869)
chr3 (331-432)||(18427187-18427288)
chr3 (311-474)||(48351436-48351599)
chr3 (318-432)||(38414689-38414803)
chr3 (331-432)||(20791338-20791439)
chr3 (311-414)||(2419481-2419584)
chr3 (323-465)||(8825008-8825150)
chr3 (331-474)||(5452099-5452240)
chr3 (332-432)||(22604602-22604702)
chr3 (331-468)||(55452052-55452187)
chr3 (341-426)||(19345047-19345132)
chr3 (331-467)||(50156697-50156831)
chr3 (338-474)||(29755500-29755636)
chr3 (331-415)||(52123993-52124077)
chr3 (331-432)||(14236061-14236162)
chr3 (40-113)||(50056893-50056966)
chr3 (343-431)||(26310495-26310583)
chr3 (323-410)||(10948589-10948676)
chr3 (331-469)||(27243050-27243189)
chr3 (331-393)||(24429062-24429124)
chr3 (25-113)||(28095952-28096039)
chr3 (366-476)||(30624631-30624739)
chr3 (325-376)||(38138613-38138664)
chr3 (331-469)||(41387568-41387704)
chr3 (341-415)||(49072064-49072138)
chr3 (323-461)||(138778-138914)
chr3 (357-432)||(7419241-7419316)
chr3 (331-426)||(15790407-15790501)
chr3 (342-385)||(22856282-22856325)
chr3 (331-429)||(44844026-44844125)
chr3 (341-431)||(50661568-50661659)
chr3 (331-405)||(752461-752535)
chr3 (334-384)||(29388634-29388684)
chr3 (336-410)||(39186028-39186102)
chr3 (331-385)||(43016502-43016556)
chr3 (1-47)||(50057279-50057325)
chr3 (337-469)||(13809087-13809219)
chr3 (345-463)||(40702173-40702289)
chr3 (345-432)||(41707490-41707577)
chr3 (365-432)||(43657067-43657134)
chr3 (66-113)||(50061382-50061429)
chr3 (331-373)||(742057-742099)
chr3 (311-468)||(40715879-40716036)
chr3 (341-386)||(41607499-41607544)
chr3 (347-432)||(42340873-42340958)
chr3 (391-432)||(46237143-46237184)
[»] chr6 (24 HSPs)
chr6 (331-469)||(34905341-34905479)
chr6 (334-426)||(16852013-16852105)
chr6 (324-464)||(10133188-10133328)
chr6 (331-474)||(445818-445961)
chr6 (333-432)||(5106340-5106439)
chr6 (331-466)||(31116161-31116296)
chr6 (331-432)||(21987334-21987435)
chr6 (331-464)||(1392640-1392770)
chr6 (341-426)||(32122843-32122928)
chr6 (311-432)||(32598965-32599086)
chr6 (311-427)||(32112734-32112850)
chr6 (340-427)||(12780805-12780892)
chr6 (337-414)||(12784982-12785059)
chr6 (331-432)||(2675937-2676038)
chr6 (331-385)||(16187469-16187523)
chr6 (331-385)||(16187687-16187741)
chr6 (341-469)||(35128769-35128898)
chr6 (331-432)||(19090251-19090353)
chr6 (323-380)||(17144700-17144757)
chr6 (331-364)||(34882267-34882300)
chr6 (331-474)||(12753797-12753940)
chr6 (331-386)||(8441886-8441941)
chr6 (331-386)||(8450690-8450745)
chr6 (441-474)||(12753758-12753791)
[»] chr4 (49 HSPs)
chr4 (311-431)||(39471200-39471320)
chr4 (323-468)||(43771132-43771277)
chr4 (331-471)||(20454543-20454681)
chr4 (333-465)||(10169684-10169814)
chr4 (331-469)||(8108961-8109099)
chr4 (332-474)||(50164395-50164537)
chr4 (331-432)||(722199-722300)
chr4 (331-432)||(47009231-47009332)
chr4 (331-474)||(33653526-33653669)
chr4 (338-474)||(49077249-49077385)
chr4 (331-432)||(754617-754718)
chr4 (336-474)||(20225383-20225519)
chr4 (333-427)||(24834625-24834719)
chr4 (331-474)||(26361345-26361480)
chr4 (311-432)||(24938432-24938553)
chr4 (333-432)||(50481584-50481683)
chr4 (331-432)||(49242212-49242313)
chr4 (325-431)||(22542424-22542530)
chr4 (311-464)||(19937189-19937341)
chr4 (331-432)||(34129437-34129538)
chr4 (311-432)||(52671872-52671993)
chr4 (311-432)||(37451030-37451149)
chr4 (334-432)||(48339380-48339478)
chr4 (339-432)||(38636379-38636472)
chr4 (335-426)||(31250924-31251015)
chr4 (341-427)||(38537560-38537649)
chr4 (335-424)||(45310989-45311078)
chr4 (53-113)||(11393149-11393209)
chr4 (53-113)||(11402876-11402936)
chr4 (331-474)||(40991626-40991769)
chr4 (350-465)||(46242000-46242113)
chr4 (341-432)||(5044587-5044678)
chr4 (341-432)||(49682838-49682929)
chr4 (353-468)||(50571870-50571985)
chr4 (331-377)||(11895134-11895180)
chr4 (311-432)||(13069983-13070104)
chr4 (311-432)||(25719129-25719251)
chr4 (331-432)||(51206085-51206187)
chr4 (339-416)||(13520007-13520084)
chr4 (341-433)||(18421878-18421968)
chr4 (391-432)||(21776942-21776983)
chr4 (344-465)||(33995985-33996106)
chr4 (365-474)||(47237812-47237921)
chr4 (361-432)||(30866999-30867070)
chr4 (333-428)||(50652375-50652470)
chr4 (333-415)||(46536301-46536383)
chr4 (333-383)||(52279298-52279348)
chr4 (342-383)||(46287532-46287573)
chr4 (391-432)||(48608122-48608163)
[»] chr1 (50 HSPs)
chr1 (292-432)||(32211786-32211922)
chr1 (331-474)||(41958085-41958226)
chr1 (331-474)||(26980299-26980442)
chr1 (316-426)||(33193098-33193208)
chr1 (331-432)||(30678948-30679049)
chr1 (331-432)||(41948183-41948284)
chr1 (331-432)||(19101638-19101739)
chr1 (331-474)||(2225226-2225367)
chr1 (339-474)||(6325858-6325990)
chr1 (334-474)||(11987626-11987766)
chr1 (339-432)||(1093118-1093211)
chr1 (333-426)||(39499442-39499535)
chr1 (293-474)||(6133628-6133804)
chr1 (331-423)||(8899065-8899157)
chr1 (340-432)||(22540410-22540502)
chr1 (334-415)||(10659808-10659889)
chr1 (331-468)||(28218085-28218222)
chr1 (330-474)||(3872670-3872813)
chr1 (340-432)||(15523252-15523344)
chr1 (340-432)||(15531246-15531338)
chr1 (323-379)||(37552978-37553034)
chr1 (311-474)||(8741240-8741405)
chr1 (343-432)||(49730906-49730995)
chr1 (311-463)||(51732290-51732440)
chr1 (323-429)||(31866361-31866466)
chr1 (331-425)||(33114020-33114114)
chr1 (316-368)||(16948551-16948603)
chr1 (331-427)||(29673522-29673618)
chr1 (336-432)||(37525571-37525667)
chr1 (333-474)||(931374-931515)
chr1 (335-432)||(15468262-15468359)
chr1 (348-429)||(46335142-46335223)
chr1 (66-113)||(1286185-1286232)
chr1 (339-418)||(45179291-45179370)
chr1 (331-432)||(13114706-13114808)
chr1 (331-432)||(41918037-41918139)
chr1 (331-432)||(15928597-15928698)
chr1 (311-427)||(15906458-15906573)
chr1 (341-432)||(29418523-29418615)
chr1 (337-469)||(35336871-35336997)
chr1 (331-426)||(39974237-39974326)
chr1 (331-386)||(12767365-12767420)
chr1 (335-382)||(15906632-15906679)
chr1 (341-384)||(44272008-44272051)
chr1 (341-432)||(50539166-50539257)
chr1 (331-432)||(11135781-11135883)
chr1 (391-432)||(15660935-15660976)
chr1 (333-406)||(27570293-27570366)
chr1 (311-360)||(33113990-33114039)
chr1 (331-384)||(47644334-47644387)
[»] chr7 (44 HSPs)
chr7 (331-476)||(46517291-46517434)
chr7 (331-419)||(27888337-27888425)
chr7 (334-474)||(31502504-31502644)
chr7 (331-474)||(32205079-32205219)
chr7 (331-474)||(22189939-22190082)
chr7 (323-464)||(7459353-7459494)
chr7 (293-427)||(25686838-25686968)
chr7 (326-474)||(33008104-33008252)
chr7 (333-432)||(7775042-7775140)
chr7 (331-469)||(12263473-12263611)
chr7 (331-465)||(27949282-27949416)
chr7 (323-415)||(6442224-6442316)
chr7 (331-474)||(14795131-14795274)
chr7 (331-474)||(15242123-15242266)
chr7 (331-429)||(32212907-32213004)
chr7 (331-432)||(11692221-11692322)
chr7 (331-432)||(11824113-11824214)
chr7 (331-474)||(48374476-48374617)
chr7 (335-418)||(23564076-23564159)
chr7 (331-468)||(19422871-19423008)
chr7 (323-469)||(39254088-39254234)
chr7 (333-459)||(32178843-32178966)
chr7 (4-89)||(39364335-39364420)
chr7 (331-432)||(44350839-44350940)
chr7 (325-429)||(10933996-10934100)
chr7 (363-474)||(12270988-12271096)
chr7 (341-465)||(25092708-25092832)
chr7 (331-432)||(24539159-24539261)
chr7 (339-384)||(36845567-36845612)
chr7 (341-432)||(19494385-19494477)
chr7 (357-465)||(44510999-44511107)
chr7 (331-432)||(17749736-17749838)
chr7 (316-373)||(1316374-1316431)
chr7 (331-384)||(6580039-6580092)
chr7 (373-474)||(8073367-8073468)
chr7 (339-416)||(9648982-9649059)
chr7 (333-369)||(36845530-36845566)
chr7 (323-362)||(12167319-12167358)
chr7 (331-429)||(17354563-17354662)
chr7 (331-409)||(1688048-1688126)
chr7 (331-432)||(25428515-25428617)
chr7 (331-373)||(31874117-31874159)
chr7 (335-384)||(3855851-3855900)
chr7 (331-415)||(13919839-13919924)
[»] chr5 (34 HSPs)
chr5 (331-474)||(10142013-10142154)
chr5 (331-474)||(28490759-28490902)
chr5 (332-425)||(39246657-39246750)
chr5 (334-432)||(34368402-34368500)
chr5 (331-432)||(5413774-5413875)
chr5 (323-432)||(25710501-25710610)
chr5 (333-468)||(28090268-28090401)
chr5 (333-432)||(17537141-17537240)
chr5 (339-432)||(41330438-41330531)
chr5 (333-432)||(43405435-43405534)
chr5 (334-432)||(27592492-27592590)
chr5 (331-433)||(37455390-37455491)
chr5 (331-432)||(30325911-30326012)
chr5 (339-429)||(28434863-28434951)
chr5 (331-431)||(41105607-41105707)
chr5 (335-474)||(28611819-28611958)
chr5 (323-429)||(34384720-34384826)
chr5 (339-427)||(1923597-1923685)
chr5 (333-469)||(25630812-25630948)
chr5 (341-384)||(31885878-31885921)
chr5 (323-425)||(10666717-10666819)
chr5 (333-466)||(17434888-17435019)
chr5 (338-431)||(28155746-28155837)
chr5 (331-432)||(42224627-42224729)
chr5 (5-115)||(1678953-1679066)
chr5 (331-382)||(28223813-28223864)
chr5 (341-384)||(36337937-36337980)
chr5 (337-415)||(10950145-10950223)
chr5 (341-415)||(25919270-25919344)
chr5 (331-384)||(14553602-14553655)
chr5 (369-430)||(43541895-43541956)
chr5 (331-430)||(24915099-24915199)
chr5 (333-427)||(2525621-2525715)
chr5 (341-395)||(4427321-4427375)
[»] scaffold0018 (1 HSPs)
scaffold0018 (323-428)||(27858-27963)
[»] scaffold0204 (1 HSPs)
scaffold0204 (334-432)||(26902-27000)
[»] scaffold0543 (1 HSPs)
scaffold0543 (337-432)||(9706-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (337-432)||(11252-11347)
[»] scaffold0245 (1 HSPs)
scaffold0245 (66-113)||(12452-12499)
[»] scaffold0118 (1 HSPs)
scaffold0118 (54-113)||(18936-18995)


Alignment Details
Target: chr8 (Bit Score: 719; Significance: 0; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 719; E-Value: 0
Query Start/End: Original strand, 1 - 928
Target Start/End: Complemental strand, 1424212 - 1423305
Alignment:
Q  1 ctagggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactacta 100  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  1424212 ctagggtttatgcggaaacaagacctcccaagatcgggagctctgatgccacgtgaaaactaaacattatatttcagagacaaaaaatgtacaactacta 1424113  T
Q  101 atgtgtttatatatatagggatccagctccccaagaaatattcattttgctactagcagggggaaaatattcatacggagataaaaaa-tagctataatc 199  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  1424112 atgtgtttatatata--gggatccagctctccaagaaatattcattttgctactagcaggggaaaaatattcatacggagataaaaaaatagctataatc 1424015  T
Q  200 attttgctactggcaggggagtatgttattcttgtcataggattgaactgaaatcggcaaagctttataagagtatttattgtccctaattaattagcaa 299  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1424014 attttgctactagcaggggagtatgttattcttgtcataggattgaactgaaatcggcaaagctttataagagtacttattgtccctaattaattagcaa 1423915  T
Q  300 cactctcttaattttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctac---actttgaaaattgaactcttacaaagtg 396  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||         |||||||| |||||   ||||||||||||||||||||||||||||    
T  1423914 cactctcttaattttaaacattttctctaaaattcattctcttatt---------cattgtgggtctactacactttgaaaattgaactcttacaaagtg 1423824  T
Q  397 gttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctagtattcatggaacatgttacatatatat 496  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1423823 gttggacatacattgattttatctaataaaagagtgtaaatactaaagagtgttgaaaagtgagtgttgctagtattcatggaacatgtcacatatatat 1423724  T
Q  497 tggatctttgatctttcttggtccaagttttgcatattcaatgctttaagatttctaattattgtagtgctcatacagtgaagaagaaacggtcattgca 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  1423723 tggatctttgatctttcttggtccaagttttgcatattcaatgctttaagatttctaattattgcagtgctcatacactgaagaagaaacggtcattgca 1423624  T
Q  597 acaattcaaatcctttggaagc-aaaagtagatgatttaactatttggatcatgtatactctttcaaagatattatgatcatatttattttaatttaaaa 695  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||     |||||||    
T  1423623 acaattcaaatcctttggaagcaaaaagtagatgatttaactattaggatcatgtatactctttaagagatattatgatcatatttat-----tttaaaa 1423529  T
Q  696 taaatatctgaacactattaactctaaattaaatcatacaaaacctaaagaatgaaagatggttcatatatagtttttgaaatgatgagattcttacagg 795  Q
    ||||||||||||||||||||||||     |||||||||||||||||||||||||| |||||||||    |||||||||||||||||||||||||||||||    
T  1423528 taaatatctgaacactattaactc-----taaatcatacaaaacctaaagaatgagagatggttc----atagtttttgaaatgatgagattcttacagg 1423438  T
Q  796 gaacacttggtagtagtaatctcccattgtccacaagttgtttagtgcaatgagggatccagctccaagaatgaaacatattaacttcgcttggaatttc 895  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1423437 aaacacttggtagtagtaatctcccattgtccacaagttgtttagtgcaatgagggatccagctccaagaatgaaacatattaacttcgcttggaatttc 1423338  T
Q  896 ccctgctagtagcaaaatgattctagttatttc 928  Q
    |||||||||||||||||||||||||||||||||    
T  1423337 ccctgctagtagcaaaatgattctagttatttc 1423305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 1977210 - 1977353
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||| ||| || | |||||    
T  1977210 actcactcttttattggtttaaatcattgtggatctacactttgaaaattgaacccacacaaagtggttggacatacattgatttcatccaacagaagag 1977309  T
Q  431 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | | ||  |||||||||| |||||||||| ||||||| ||||    
T  1977310 tg--agtgctagagagagtgttaaaaagtgagtattgctagcattc 1977353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 311 - 467
Target Start/End: Original strand, 24055942 - 24056098
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||| ||||| ||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||   |||||||||| |||||||||||    
T  24055942 ttttgaacactttctctaacactcactctcttattggtttaaataattgtgggtctacactttgaaaattgaacttacacaaagtggtgggacatacatt 24056041  T
Q  411 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgct 467  Q
     |||| |||| ||||||||| |  | | ||  |||||| ||||||||||||||||||||    
T  24056042 aatttcatctgataaaagagcg--agtgctaaagagagcgttgaaaagtgagtgttgct 24056098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 335 - 468
Target Start/End: Complemental strand, 8903991 - 8903858
Alignment:
Q  335 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgta 434  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    |||||||||| |||||||||||||||| ||| ||||||  ||||      
T  8903991 actctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccgacacaaagtggtgggacatacattgatttcatcaaataaacaagtg-- 8903894  T
Q  435 aatact--agagagtgttgaaaagtgagtgttgcta 468  Q
    | ||||  ||||||||||||||| ||||||||||||    
T  8903893 agtactagagagagtgttgaaaaatgagtgttgcta 8903858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 16983537 - 16983394
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |  |||||||| | ||||||| | |||||||||| ||||||  ||    
T  16983537 actcactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaagtgatgggacataaaatgattttatccaataaatcag 16983438  T
Q  431 tgtaaatactag--agagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | | ||||  ||||||||||||||||||||||||||| ||||    
T  16983437 tg--agtgctagatagagtgttgaaaagtgagtgttgctagcattc 16983394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 334 - 432
Target Start/End: Complemental strand, 8914911 - 8914813
Alignment:
Q  334 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |  |||||||||| |||||||||||| ||||||| ||| ||||||||    
T  8914911 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtgggacatacattggttttatccaatgaaagagtg 8914813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 331 - 429
Target Start/End: Original strand, 17499270 - 17499368
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||| |||| ||||||| |||||||| ||| |||||||||    
T  17499270 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaaatggtgggacatatattgatttcatccaataaaaga 17499368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 338 - 432
Target Start/End: Complemental strand, 35797531 - 35797437
Alignment:
Q  338 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||||||  |||||||||| | |||||||||||||||||| ||||||||||||    
T  35797531 ctcttattgatttaaatcattgtggatttacactttaaaaattgaactcgcacaaagtggtggaacatacattgattttatccaataaaagagtg 35797437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 28413906 - 28414049
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||| ||| |||||||||||||||||| ||| |||| ||||||||||||||||||  |||||||||| |||||||||||||||| ||| ||||||| ||    
T  28413906 actcattcttttattggtttaaatcattatgggtctatactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatcgaataaaaaag 28414005  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||        ||||||||||||||||||||||||| ||| ||||    
T  28414006 tgagcgctagagagagtgttgaaaagtgagtgttgttagcattc 28414049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 339 - 427
Target Start/End: Original strand, 9952802 - 9952890
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||  |||||||||| |||||| ||||||||| ||| |||||||    
T  9952802 tcttattggtttaaatcattgtgggtttacactttgaaaattgaactcacacaaagtggtgggacatgcattgatttcatccaataaaa 9952890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 337 - 469
Target Start/End: Complemental strand, 32072234 - 32072102
Alignment:
Q  337 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaa 436  Q
    |||||||||| ||||||| ||||||| |||||||||| |||||||||| |  |||||||||| ||||||||||| |||| ||| ||||||||||||  |     
T  32072234 tctcttattgatttaaataattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattcatttcatccaataaaagagtg--ag 32072137  T
Q  437 tact--agagagtgttgaaaagtgagtgttgctag 469  Q
    | ||  ||||||||||||||||||| |||||||||    
T  32072136 tgctagagagagtgttgaaaagtgaatgttgctag 32072102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 34861229 - 34861365
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||| |||||||      ||||||||||||||||    |||||||||| |||||||||||||||| ||| ||||||||||    
T  34861229 actcactctcttattggtttaaattattgtggg-----actttgaaaattgaacctacacaaagtggtgggacatacattgatttcatccaataaaagag 34861323  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | | |||||||||||||||||||||| | |||||| ||||    
T  34861324 tg--agtgctagagagtgttgaaaagtgagaggtgctagcattc 34861365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 43506678 - 43506538
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||| | |||| |  |||||||||| | ||||||||||||| |||| ||||||| ||    
T  43506678 actcactctcttattggcttaaatcattgtgggtctacacattgaaagtagaacccacacaaagtggtggaacatacattgattatatccaataaaa-ag 43506580  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | |  ||||||||||| |||||||||||||||||| ||||    
T  43506579 tg--agtgttagagagtgttcaaaagtgagtgttgctagcattc 43506538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 6098794 - 6098867
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    ||||||||||| ||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6098794 ttttaaacattctctctaatactcactctcttattgatttaaattattgtggatctacactttgaaaattgaac 6098867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 333 - 474
Target Start/End: Original strand, 35151768 - 35151909
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||| ||||||| |||| ||| ||||||| |||||||||| |||||||||  |  ||||| |||| |||||||||||||||| ||| |||||||||||     
T  35151768 tcactttcttattagtttgaattattgtgggtctacactttaaaaattgaatccccacaaaatggtgggacatacattgatttcatccaataaaagagt- 35151866  T
Q  433 taaatactaga--gagtgttgaaaagtgagtgttgctagtattc 474  Q
     |||| ||| |  ||||||| |||||||||||||||||||||||    
T  35151867 -aaatgctaaaaagagtgttaaaaagtgagtgttgctagtattc 35151909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 5980022 - 5979880
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||||||||| ||| |||||||  |  |||||||||||||||||| |  |||||||||| |||||||||||||| | ||| |||| |||||    
T  5980022 actcactctcttattggtt-aaaccattgtgagttcacactttgaaaattgaacccacacaaagtggtgggacatacattgatctcatccaatagaagag 5979924  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    |||  |    ||||||||||||||||| ||||||||||| ||||    
T  5979923 tgtctactagagagagtgttgaaaagtaagtgttgctagcattc 5979880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 17741574 - 17741659
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 426  Q
    ||||||||||||| |||| | | |||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||| ||||||    
T  17741574 ttattggtttaaaccattataggtctacactttgaaaattgaactctcacaaaatggtgggacatacattgatttcatccaataaa 17741659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 10712088 - 10711976
Alignment:
Q  2 tagggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaa-aatgcacaactacta 100  Q
    ||||||||||||||||||||||| |||||||||   ||| |||||||||| ||||||||| || ||||||| |||||||||||| |||| | | | ||||    
T  10712088 tagggtttatgcggaaacaagactccccaagattgagagttctgatgccatgtgaaaactgaatattatatgtcagagataaaataatgtatatccacta 10711989  T
Q  101 atgtgtttatata 113  Q
    |||| ||||||||    
T  10711988 atgtatttatata 10711976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 23685265 - 23685173
Alignment:
Q  340 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||| | |||||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  23685265 cttattggtttaaatcattgcgaatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 23685173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 336 - 432
Target Start/End: Complemental strand, 45246572 - 45246476
Alignment:
Q  336 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||| ||||||  | ||||||||  ||||||||||||||||||| ||||||| ||||    
T  45246572 ctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgattttatccaataaaatagtg 45246476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 337 - 432
Target Start/End: Complemental strand, 31301251 - 31301157
Alignment:
Q  337 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||| ||| || |||||||| |||||||| ||||||  |||||||||| | |||||||||||||| ||| ||||||||||||    
T  31301251 tctcttattggtttaaattattatg-atctacacattgaaaatagaactcacacaaagtggtggaacatacattgatttcatccaataaaagagtg 31301157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 341 - 469
Target Start/End: Original strand, 11962729 - 11962856
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact 440  Q
    |||||||||||||||||| |||||||||||||||||||||||||    | ||| |||| ||| |||| ||||||||||  ||||||||||||   ||       
T  11962729 ttattggtttaaatcatt-tggatctacactttgaaaattgaacctacataaaatggtgggatatactttgattttattcaataaaagagtgagtattaa 11962827  T
Q  441 agagagtgttgaaaagtgagtgttgctag 469  Q
    |||| |||||||||||||||||| |||||    
T  11962828 agagcgtgttgaaaagtgagtgtcgctag 11962856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 414
Target Start/End: Original strand, 36804856 - 36804959
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||||| ||| ||| ||| |||||||||||| ||||||| ||||||||| || | |||||||||||||| |  ||||| |||| |||||||||||    
T  36804856 ttttcaacattctctctaatacttactctcttattgatttaaattattgtggatgtatattttgaaaattgaacccacacaaaatggtgggacatacatt 36804955  T
Q  411 gatt 414  Q
    ||||    
T  36804956 gatt 36804959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 331 - 465
Target Start/End: Complemental strand, 41727573 - 41727439
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||| ||||||||||||||| ||  ||||||| || ||||  ||||    |||||| ||| ||||||||||||||||||||||| |||||||    
T  41727573 actcactctcttgttggtttaaatcattatgagtctacacattaaaaacagaacctacacaaagcggtgggacatacattgattttatctaacaaaagag 41727474  T
Q  431 tgtaaatact--agagagtgttgaaaagtgagtgttg 465  Q
    ||  | | ||  |||||||||| ||||||||||||||    
T  41727473 tg--attgctaaagagagtgttcaaaagtgagtgttg 41727439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 7493379 - 7493432
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  7493379 actcactctcttattggtttaaatcattgtgagtctacactttgaaaatagaac 7493432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 4675039 - 4674952
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||||   |||||||||||||||| |||||  |||||||| | ||    |||||||||| ||||||||||||||||    
T  4675039 ttattggtttaaatcattgtgtgactacactttgaaaattaaactcacacaaagtgatagg----acattgatttcatctaataaaagagtg 4674952  T

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Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 469
Target Start/End: Complemental strand, 6387705 - 6387568
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||| ||||||||||| ||||| || ||||| || || |||||| |||| |||| |  | ||| |||| |||||||||||||||||||| |||||||||    
T  6387705 actcattctcttattgggttaaaacaatgtgggtcgtatactttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaaga 6387606  T
Q  430 gtgtaaatactagagagtgttgaaaagtgagtgttgctag 469  Q
    |||  | |  ||||||||||  ||||| ||||||||||||    
T  6387605 gtg--agtgttagagagtgtccaaaagagagtgttgctag 6387568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 331 - 406
Target Start/End: Complemental strand, 14236481 - 14236406
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacata 406  Q
    |||||||||||| ||||||||||| ||||||   ||||||||| |||||||||||   |||||||||| |||||||    
T  14236481 actcactctcttgttggtttaaattattgtgcgcctacactttcaaaattgaacttacacaaagtggtgggacata 14236406  T

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Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 4319780 - 4319866
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    |||||| ||||||| | ||| | ||||||||||||||||| || ||  |||||||| |  ||||| |||||||||||||||||||||    
T  4319780 ttattgatttaaattagtgtaggtctacactttgaaaattaaattcacacaaagtgatgagacatgcattgattttatctaataaaa 4319866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 349 - 419
Target Start/End: Complemental strand, 9192126 - 9192056
Alignment:
Q  349 ttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatc 419  Q
    |||||||||||||  |||||| ||| |||||||||| |  |||||||||| ||| ||||||||||||||||    
T  9192126 ttaaatcattgtgagtctacaatttaaaaattgaacccacacaaagtggtgggatatacattgattttatc 9192056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 432
Target Start/End: Complemental strand, 35689588 - 35689522
Alignment:
Q  366 tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  35689588 tacactttgaaaatggaactcacataaagtggtgggacatacattgatttcatccaataaaaaagtg 35689522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 1961392 - 1961327
Alignment:
Q  364 tctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||||||||||||||| |   ||||||||| |||| ||| ||||||||||| |||||||||    
T  1961392 tctacactttgaaaattgaacccacgcaaagtggtgggacgtaccttgattttatccaataaaaga 1961327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 5095777 - 5095826
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgt 360  Q
    ||||||||||  ||| ||| ||||||||||||||||||||||||||||||    
T  5095777 ttttaaacatcctctctaatactcactctcttattggtttaaatcattgt 5095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 13407360 - 13407457
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    ||||| ||||| ||||| |||||||| ||||| || |||||||||||||| |||| |    ||| |||| |||||||||||||||||||| |||||||    
T  13407360 actcattctctcattgggttaaatcaatgtgggtcatacactttgaaaatagaacccacttaaaatggtgggacatacattgattttatccaataaaa 13407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 34952573 - 34952504
Alignment:
Q  344 ttggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgat 413  Q
    |||||||||||||||| || ||||||  |||||||||||| ||  ||||| |||| ||||||||||||||    
T  34952573 ttggtttaaatcattgcgggtctacatattgaaaattgaaatcccacaaaatggtgggacatacattgat 34952504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 469
Target Start/End: Complemental strand, 43026400 - 43026298
Alignment:
Q  365 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 464  Q
    |||||||||| |||| |||| |  | |||||||  |||||||||||||||||| ||||||||| ||||  | | |||||||||||| ||||| || ||||    
T  43026400 ctacactttggaaatggaacccacataaagtggcaggacatacattgattttacctaataaaaaagtg--agtgctagagagtgtttaaaagagaatgtt 43026303  T
Q  465 gctag 469  Q
    |||||    
T  43026302 gctag 43026298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 341 - 429
Target Start/End: Complemental strand, 9193515 - 9193427
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||||   ||||||| ||  |||||||| | |||| ||| |||||||||    
T  9193515 ttattggttttaattattgtaggtctacactttgaaaattgaacttacacaaagtagtgagacatacactaatttcatcaaataaaaga 9193427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 44420699 - 44420639
Alignment:
Q  53 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 113  Q
    ||||||||| || |||||||||||||||||||  ||  ||||| |||||||||||||||||    
T  44420699 gtgaaaactgaatattatatttcagagataaatgatatacaaccactaatgtgtttatata 44420639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 432
Target Start/End: Complemental strand, 1205936 - 1205869
Alignment:
Q  365 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||| |||| |||| | || ||||||||  |||||||||| |||||| ||||||||||||||    
T  1205936 ctacactttggaaatagaacccatataaagtggtgagacatacattaattttacctaataaaagagtg 1205869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 417
Target Start/End: Complemental strand, 25915175 - 25915086
Alignment:
Q  331 actcactctcttattggtttaaatcattgtgga---tctacactttgaaaattgaactcttacaaagtggttggacatacattgatttta 417  Q
    ||||||||| ||||||| | |||||| ||||||   |||||||||||||||| |||| |  | ||||| || ||||||||||||||||||    
T  25915175 actcactcttttattgggtgaaatcaatgtggaacctctacactttgaaaatggaacccaaataaagtagtaggacatacattgatttta 25915086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 341 - 408
Target Start/End: Complemental strand, 35819265 - 35819198
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacataca 408  Q
    ||||| |||||||||||||||| |||| |||||||||||||| | |  ||||| |||| |||||||||    
T  35819265 ttattagtttaaatcattgtgggtctatactttgaaaattgagcccacacaaaatggtgggacataca 35819198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 16985659 - 16985708
Alignment:
Q  53 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaat 102  Q
    ||||||||| || ||||||||||||||||||| |||| ||||| ||||||    
T  16985659 gtgaaaactgaatattatatttcagagataaataatgtacaaccactaat 16985708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 6e-52; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 745 - 927
Target Start/End: Original strand, 2816830 - 2817012
Alignment:
Q  745 gaatgaaagatggttcatatatagtttttgaaatgatgagattcttacagggaacacttggtagtagtaatctcccat----tgtccacaagttgtttag 840  Q
    |||||||||||||||||||    ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||    |||||||| |||||||||    
T  2816830 gaatgaaagatggttcata----gtttttgaaatcaagagattcttacagggaacactaggtagtagtaatctcccatatattgtccacatgttgtttag 2816925  T
Q  841 tgcaatgagggatccagctccaagaatgaaacatattaacttcgcttggaatttcccctgctagtagcaaaatgattctagttattt 927  Q
     ||||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||  ||||||||    
T  2816926 ggcaatgagggatccaactccaagaatgaaacatataaactttgctcggaatttcccctgctagtagcaaaatgcttgcagttattt 2817012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 497 - 684
Target Start/End: Original strand, 2816572 - 2816752
Alignment:
Q  497 tggatctttgatctttcttggtccaagttttgcatattcaatgctttaagatttctaattattgtagtgctcatacagtgaagaagaaacggtcattgca 596  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||| | |||| |||||||||||| |||||||||||||||||||||    |||| |||    
T  2816572 tggagctttgatctttgttggtccaagttttgcatattcaatacttga-gatt-ctaattattgtaatgctcatacagtgaagaagaat---tcatagca 2816666  T
Q  597 acaattcaaatcctttggaagcaaaagtagatgatttaactatttggatcatgtatactctttcaaagatattatgatcatatttatt 684  Q
    |||||||||||||| |||||||||||||  |||||||||||| |||||| |   |  |||||||||||||||| ||||| ||||||||    
T  2816667 acaattcaaatcctctggaagcaaaagtgtatgatttaactacttggatga--cactctctttcaaagatattgtgatcgtatttatt 2816752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 44274397 - 44274276
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    ||||||| ||| ||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |  |||||||||| |||||||||||    
T  44274397 ttttaaatattctctctaacactcactctgttattggtttaaatcattgtggatctacactttgaaagttgaacccacacaaagtggtgggacatacatt 44274298  T
Q  411 gattttatctaataaaagagtg 432  Q
    ||||||||| ||| ||||||||    
T  44274297 gattttatccaatgaaagagtg 44274276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 333 - 432
Target Start/End: Complemental strand, 9470222 - 9470123
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||||||| |||||||||||||||| ||| ||||||||||||    
T  9470222 tcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagagtg 9470123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 26767798 - 26767941
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||| |||||||||||||||||||||  |||||| |||||||||||||| || |||||||||| |||||||||||||||| ||| | |||||||     
T  26767798 actcactcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccctcacaaagtggtgggacatacattgatttcatccagtaaaaga- 26767896  T
Q  431 tgtaaatactagagag--tgttgaaaagtgagtgttgctagtattc 474  Q
     |||| | ||||||||  ||||||||||||||||||||||| ||||    
T  26767897 -gtaagtgctagagagaatgttgaaaagtgagtgttgctagcattc 26767941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 311 - 469
Target Start/End: Original strand, 6980137 - 6980295
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||| ||||| ||| ||||||||||||||| ||| |||||||||||| |||| ||||||||||||||||||  |||||||||| | |||||| ||    
T  6980137 ttttgaacactttctctaatactcactctcttattagttgaaatcattgtgggtctatactttgaaaattgaactcacacaaagtggtagaacatacctt 6980236  T
Q  411 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgctag 469  Q
    ||||| ||| ||||||||||||  | | ||  ||||||||||||||||||| |||||||||    
T  6980237 gatttcatccaataaaagagtg--agtgctagagagagtgttgaaaagtgaatgttgctag 6980295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 12989334 - 12989191
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||| ||||||||| | |||| |||  | ||||||||||| |||||||||||||||| ||| ||| ||||||    
T  12989334 actcactctcttattggtttaaatcattgtgggtctacacttcggaaatagaatccatacaaagtggtgggacatacattgatttcatccaatgaaagag 12989235  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||        ||||||||||||||||||||||||||||| ||||    
T  12989234 tgagtgagaaagagagtgttgaaaagtgagtgttgctagcattc 12989191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 311 - 474
Target Start/End: Complemental strand, 45554722 - 45554567
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||||| ||| ||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||        ||||||||| |||||||||||    
T  45554722 ttttgaacattctctctaatactcactttcttattggtttaaatcattgtgggtctacacttggaaaattg--------caaagtggtgggacatacatt 45554631  T
Q  411 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||||| ||| ||||||||||||  | | ||  ||||||||||||||||||||||||||||| ||||    
T  45554630 gatttcatccaataaaagagtg--agtgctagagagagtgttgaaaagtgagtgttgctagcattc 45554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 25238294 - 25238411
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttaca-aagtggttggacatacat 409  Q
    ||||||||| ||||| ||  ||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |  | | ||||| |  |||||||||    
T  25238294 ttttaaacactttctctagcactcacttttttattggtttaaatcattgtggatctacactttgaaaatagaacccacaaagaagtgatgagacatacat 25238393  T
Q  410 tgattttatctaataaaa 427  Q
    ||||||||||||||||||    
T  25238394 tgattttatctaataaaa 25238411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 34142164 - 34142313
Alignment:
Q  319 attttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttat 418  Q
    ||||||||||| | ||||||||||||||||||||| |||||||  ||||||||||||||||||||| |  ||||||| ||  |||||||||  |||| ||    
T  34142164 attttctttaatattcactctcttattggtttaaaccattgtgactctacactttgaaaattgaacccacacaaagtagtgagacatacatgaatttcat 34142263  T
Q  419 ctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgcta 468  Q
    | ||||||| |||| |  |   ||||| ||||||||||| ||||||||||    
T  34142264 ccaataaaaaagtgaatgtttgagagattgttgaaaagtaagtgttgcta 34142313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 7919311 - 7919382
Alignment:
Q  335 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacata 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |  |||||||||| |||||||    
T  7919311 actctcttattggtttaaatcattgtggatctacactttgaaaattgaatccacacaaagtggtgggacata 7919382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 333 - 432
Target Start/End: Complemental strand, 19639234 - 19639135
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||||||||||  || | ||| |  ||||||||||||||| ||||||||||| ||||    
T  19639234 tcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatctaataaaatagtg 19639135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 333 - 432
Target Start/End: Complemental strand, 19837827 - 19837728
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||||||||||  || | ||| |  ||||||||||||||| ||||||||||| ||||    
T  19837827 tcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatctaataaaatagtg 19837728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 331 - 464
Target Start/End: Original strand, 35316438 - 35316569
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||| ||||||||||||||| |||||| ||| |||||||||     | ||| |||| ||||||||||| |||||||||||||||||||    
T  35316438 actcactctcttattgatttaaatcattgtgggtctacaatttaaaaattgaatcaacataaaatggtgggacatacattaattttatctaataaaagag 35316537  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgtt 464  Q
    ||  | || |||||| ||||||||| | ||||||    
T  35316538 tg--agtaatagagaatgttgaaaaataagtgtt 35316569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 364 - 464
Target Start/End: Complemental strand, 2476644 - 2476546
Alignment:
Q  364 tctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgt 463  Q
    |||||| ||||||||||||| |   ||||||| || ||||||||||||||||||||||||||||||  |||| | ||||||| |||||||||||||||||    
T  2476644 tctacattttgaaaattgaagttacacaaagtagtgggacatacattgattttatctaataaaaga--gtaagtgctagagaatgttgaaaagtgagtgt 2476547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 11539569 - 11539465
Alignment:
Q  331 actcactctcttattggtttaaatca-ttgtggatctacactttgaaaattgaactcttacaaagtggttggacatac--attgattttatctaataaaa 427  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||  |||||||| | | ||||||  |||||||| ||| |||||||    
T  11539569 actcactctcttattggtttaaatcaattctggatctacactttgaaaatagaactcacacaaagtgatggaacatacatattgatttcatccaataaaa 11539470  T
Q  428 gagtg 432  Q
    |||||    
T  11539469 gagtg 11539465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 323 - 427
Target Start/End: Original strand, 12098895 - 12099000
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcatt-gtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatcta 421  Q
    ||||||| ||||||||||||||| |||||||||||| |||  | ||||||||||||||||||||| ||||||||||   ||||||| ||||||| ||| |    
T  12098895 tctttaatactcactctcttattagtttaaatcatttgtgagtttacactttgaaaattgaactcatacaaagtggcgagacatactttgatttcatcaa 12098994  T
Q  422 ataaaa 427  Q
    ||||||    
T  12098995 ataaaa 12099000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 38464302 - 38464222
Alignment:
Q  335 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 415  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |   ||||||| |  |||||||||||||||    
T  38464302 actctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacgcaaagtgatgagacatacattgattt 38464222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 10981661 - 10981582
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| |||| |||| |  |||||||||| |||||||||||    
T  10981661 actcactctcttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacatt 10981582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 340 - 474
Target Start/End: Original strand, 18511255 - 18511389
Alignment:
Q  340 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg-taaata 438  Q
    |||||||||||||| |||||| | ||| ||||||||||||||||| |  | ||| | || |||||||||||||||||||| ||||||||||||    |||    
T  18511255 cttattggtttaaaacattgtaggtcttcactttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtgata 18511354  T
Q  439 ctagagagtgttgaaaagtgagtgttgctagtattc 474  Q
     | ||||||||| |||||||||||||||||| ||||    
T  18511355 gt-gagagtgttaaaaagtgagtgttgctagcattc 18511389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 323 - 395
Target Start/End: Original strand, 472192 - 472264
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagt 395  Q
    ||||||| |||| ||||||||||||||||||||||||||||| || | ||||||||||||||||  |||||||    
T  472192 tctttaatactcgctctcttattggtttaaatcattgtggatatatattttgaaaattgaactcacacaaagt 472264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 311 - 469
Target Start/End: Original strand, 16719447 - 16719605
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||||||| ||||| ||||| | |  |||||||||||||||||| || |||||| ||||||||||||||    |  || |||| ||| |||||||    
T  16719447 tttttaacattttgtttaatactcatttttgtattggtttaaatcattgcgggtctacattttgaaaattgaacctacatgaaatggtgggatatacatt 16719546  T
Q  411 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctag 469  Q
    ||||| ||||||||||||||| |       ||| |||||||||||||||||||||||||    
T  16719547 gatttcatctaataaaagagtatgtgctaaagacagtgttgaaaagtgagtgttgctag 16719605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 325 - 427
Target Start/End: Complemental strand, 30849386 - 30849284
Alignment:
Q  325 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 424  Q
    ||||| || |||| |||||||| ||||||||||||||||| ||  |||| ||||| |||| | |||||| |||| |||| ||||||||||| ||||||||    
T  30849386 tttaatacgcactttcttattgatttaaatcattgtggatttatcctttaaaaatagaacccatacaaattggtgggacgtacattgatttcatctaata 30849287  T
Q  425 aaa 427  Q
    |||    
T  30849286 aaa 30849284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 32701603 - 32701513
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 431  Q
    |||||||||||||||||| ||||| ||||| || ||||||||||    | |||||||| ||| |||||||||||||||| |||||||||||    
T  32701603 ttattggtttaaatcattatggatttacacgttaaaaattgaacatacataaagtggtgggatatacattgattttatccaataaaagagt 32701513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 37652292 - 37652378
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||    |||||| ||| | |||||||||||||| |||||||||||    
T  37652292 ttattggtttaaatcattgtgaatctacacgttggaaattgaacatacacaaaggggtggaacatacattgatttcatctaataaaa 37652378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 341 - 465
Target Start/End: Complemental strand, 17188198 - 17188076
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact 440  Q
    |||||||||||||||||| |||  ||||||||||||||||||  ||  ||||||||||  || | |||||||||| ||| ||||||| ||||  | |  |    
T  17188198 ttattggtttaaatcattctgggcctacactttgaaaattgagttcacacaaagtggtgagatacacattgatttcatccaataaaatagtg--agtgat 17188101  T
Q  441 agagagtgttgaaaagtgagtgttg 465  Q
    |||||| ||||||||||||||||||    
T  17188100 agagagagttgaaaagtgagtgttg 17188076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 32856172 - 32856319
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||||||| ||| |  ||||||||||   ||||| ||| |||| |||  |||||||||    
T  32856172 actcaatctcttattggtttaaatcactatggatctacactttgaaaattcaacccacacaaagtggtgaaacatatattaatttcatccgataaaagag 32856271  T
Q  431 t--gtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    |  ||   ||||  |||||||||| |||||||||||||| ||| ||||    
T  32856272 tcagtgcgtactggagagagtgttcaaaagtgagtgttgttagcattc 32856319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 464
Target Start/End: Original strand, 36471875 - 36472008
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||| |||||||||||||||||||||  | |||| |||||||||||||  | || ||||||||  ||||||| ||||||| ||| ||||| |||     
T  36471875 actcactcttttattggtttaaatcattgtgagtttacattttgaaaattgaatccataaaaagtggtgagacatactttgatttcatccaataagagat 36471974  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgtt 464  Q
    ||    |   ||||||||||||||||||||||||    
T  36471975 tgagtgtcagagagagtgttgaaaagtgagtgtt 36472008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 4552877 - 4552925
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaat 379  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  4552877 actcactctcttattggtttaaatcattgtgggtctacacattgaaaat 4552925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 25476329 - 25476432
Alignment:
Q  5 ggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgt 104  Q
    ||||||||||||| |||| ||||    ||||  |||||||||||||| ||||||||| || ||||||||||| ||||||| |||  ||||| ||||||||    
T  25476329 ggtttatgcggaagcaaggcccctagtgatcgagagctctgatgccatgtgaaaactgaagattatatttcaaagataaataatttacaaccactaatgt 25476428  T
Q  105 gttt 108  Q
    ||||    
T  25476429 gttt 25476432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 14489564 - 14489626
Alignment:
Q  319 attttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattg 381  Q
    ||||||| ||| ||||| ||| |||||||||||||| |||||||||||||||||| |||||||    
T  14489564 attttctctaatactcattcttttattggtttaaattattgtggatctacactttaaaaattg 14489626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 339 - 405
Target Start/End: Complemental strand, 15884564 - 15884498
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacat 405  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||| |  |||||||||| ||||||    
T  15884564 tcttattggtttaaataattgtgggtctacattttgaaaattgaacccacacaaagtggtgggacat 15884498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 17508921 - 17508848
Alignment:
Q  40 gctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 113  Q
    |||||||| ||| ||||||| | || ||||||||||||| ||||| |||| ||||| |||||||||||||||||    
T  17508921 gctctgataccatgtgaaaattgaatattatatttcagaaataaataatgtacaaccactaatgtgtttatata 17508848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 43414498 - 43414402
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    |||||| ||||| |||||||||||||||||||||||| ||| ||||||| | |||    |||| |||| | |||||||||||||| ||| |||||||    
T  43414498 actcaccctcttcttggtttaaatcattgtggatctatactctgaaaatagcacttacgcaaaatggtagaacatacattgatttcatccaataaaa 43414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 28898073 - 28898175
Alignment:
Q  331 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||| ||||||| | |||||| ||| |||||||||||||| ||||  ||| |  | |||||||| |||||||||||||||| | | |||||||||    
T  28898073 actcactcttttattggatgaaatcaatgtaggatctacactttggaaatgaaacccacataaagtggtgggacatacattgatttcacccaataaaaga 28898172  T
Q  430 gtg 432  Q
    |||    
T  28898173 gtg 28898175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 391 - 432
Target Start/End: Original strand, 41805873 - 41805914
Alignment:
Q  391 aaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  41805873 aaagtggtgggacatacattgattttatccaataaaagagtg 41805914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 469
Target Start/End: Original strand, 24895303 - 24895440
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||| | ||||| |||||||| ||||| || ||||||||| |||| ||||||  | ||| |||| | | |||||||||||||||| | |||||||    
T  24895303 actcactctttcattgggttaaatcaatgtgggtcatacactttggaaatggaactcacataaaatggtggaatatacattgattttatccattaaaaga 24895402  T
Q  430 gtgtaaatactagagagtgttgaaaagtgagtgttgctag 469  Q
    |||  | || |||||| |||  ||||| ||||||||||||    
T  24895403 gtg--agtattagagactgtccaaaagagagtgttgctag 24895440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 25730456 - 25730506
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtg 361  Q
    ||||||||||||| ||||| | ||||||| |||||||||||||||| ||||    
T  25730456 ttttaaacattttttttaatattcactcttttattggtttaaatcactgtg 25730506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 341 - 379
Target Start/End: Original strand, 30718374 - 30718412
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaat 379  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  30718374 ttattggtttaaatcattgtgagtctacactttgaaaat 30718412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 432
Target Start/End: Complemental strand, 42183029 - 42182931
Alignment:
Q  335 actctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||| ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | | ||||||||||||    
T  42183029 actcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtg 42182931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 38500282 - 38500219
Alignment:
Q  53 gtgaaaactaaacattatatttcaga---gataaaaaatgcacaactactaatgtgtttatata 113  Q
    ||||||||| || |||||||||||||   |||||| |||| ||||| |||||||||||||||||    
T  38500282 gtgaaaactgaatattatatttcagacgagataaataatgtacaaccactaatgtgtttatata 38500219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 2e-39; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 41451932 - 41452075
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |  |||||||||| |||||||| ||||||| ||| ||||||||||    
T  41451932 actcactctcttattggtttaaatcattgtgggtctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagag 41452031  T
Q  431 tgtaaatactagaga--gtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | |||||||||  |||||||||||||||||||||||||||||    
T  41452032 tg--agtactagagattgtgttgaaaagtgagtgttgctagtattc 41452075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 24734848 - 24734705
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||||||| |  |||||||||| |||||||| ||||||| ||| ||||||||||    
T  24734848 actcactctcttattggtttaaatcattgtgggcctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagag 24734749  T
Q  431 tgtaaatactagaga--gtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | |||||||||  |||||||||||||||||||||||||||||    
T  24734748 tg--agtactagagattgtgttgaaaagtgagtgttgctagtattc 24734705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 28529394 - 28529253
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||| |||||| |||||||||||||||| ||| ||||||||||    
T  28529394 actcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccc--acacagtggtgggacatacattgatttcatccaataaaagag 28529297  T
Q  431 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | | ||  ||||||||||||||||||||||||||||| ||||    
T  28529296 tg--agtgctagagagagtgttgaaaagtgagtgttgctagcattc 28529253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 20493482 - 20493625
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |  |||||||||| |||||||||||||||| ||| |||||| |||    
T  20493482 actcactctcttattggtttaaatcattgtgggtctacactttgaatattgaacccccacaaagtggtaggacatacattgatttcatccaataaatgag 20493581  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||    |   ||||||||||||||||||||||||||||| ||||    
T  20493582 tgagtgttagagagagtgttgaaaagtgagtgttgctagcattc 20493625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 37776740 - 37776883
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||||| |  |||||||||| |||||||||||||||| ||||||||||||||    
T  37776740 actcactctcttagtggtttaaatcattgtaggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatctaataaaagag 37776839  T
Q  431 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | | ||  ||| ||||||||||||||||||||||||| ||||    
T  37776840 tg--agtgctggagaaagtgttgaaaagtgagtgttgctagcattc 37776883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 46450209 - 46450067
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttac-aaagtggttggacatacattgattttatctaataaaaga 429  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |  || |||||||| |||||||||||||||  |||||||||||||    
T  46450209 actcactctcttattggtttaaatcattgtgggtctacactttgcaaatagaacccacacaaaagtggtgggacatacattgattccatctaataaaaga 46450110  T
Q  430 gtgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    |||  | | |||||||||||| |||||||||||||||||| ||||    
T  46450109 gtg--agtgctagagagtgttcaaaagtgagtgttgctagcattc 46450067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 46161090 - 46160949
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||    |||||||||| ||||||  |||||||| ||| ||||||||||    
T  46161090 actcactctcttattggtttaaatcattatggatctacactttggaaatagaaccaacacaaagtggtcggacatgtattgatttcatccaataaaagag 46160991  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | | |||||||||||| |||||||||||||||||| ||||    
T  46160990 tg--agtgctagagagtgttcaaaagtgagtgttgctagcattc 46160949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 331 - 430
Target Start/End: Original strand, 29588770 - 29588869
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  | ||||||   |||||||||||||||||||| ||||||||||    
T  29588770 actcactctcttattgatttaaatcattgtgggtctacactttgaaaattgaactcacataaagtgaaaggacatacattgattttatccaataaaagag 29588869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 18427187 - 18427288
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||| |  ||||| |||| |||||||||||||||| ||| |||||| |||    
T  18427187 actcactctcttattggtttaaatcattgtgggtctacactttgaaaatagaacccacacaaaatggtgggacatacattgatttcatccaataaatgag 18427286  T
Q  431 tg 432  Q
    ||    
T  18427287 tg 18427288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 311 - 474
Target Start/End: Complemental strand, 48351599 - 48351436
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||||||||| ||| ||||  |||||||||| ||||||||||| ||||| ||||||||||||||||||| |  ||||||| ||  |||||| |||    
T  48351599 ttttgaacattttctctaatactctttctcttattgatttaaatcattatggatatacactttgaaaattgaacccacacaaagtagtgagacatatatt 48351500  T
Q  411 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||||||||| |||||||||||||   |   |||||||||| |||| ||||||||| ||| ||||    
T  48351499 gattttatccaataaaagagtgtgtcttaaagagagtgttaaaaactgagtgttgttagcattc 48351436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 38414803 - 38414689
Alignment:
Q  318 cattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatttta 417  Q
    |||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||| ||| |  ||||| |||| |||||||||||||| |||    
T  38414803 cattctctttaacactcactctcttattggtttaaattatcgtggatctacactttaaaaattaaacccacacaaaatggtgggacatacattgatctta 38414704  T
Q  418 tctaataaaagagtg 432  Q
    |||||| | ||||||    
T  38414703 tctaatgagagagtg 38414689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 20791439 - 20791338
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||    
T  20791439 actcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatag 20791340  T
Q  431 tg 432  Q
    ||    
T  20791339 tg 20791338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 311 - 414
Target Start/End: Original strand, 2419481 - 2419584
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||| ||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||| |||| |||||| | ||||||||| |||||| ||||    
T  2419481 ttttgaacactttctttaatactcactttcttattggtttaaatcattgtgggtctacacattggaaatagaactcatgcaaagtggtaggacatgcatt 2419580  T
Q  411 gatt 414  Q
    ||||    
T  2419581 gatt 2419584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 323 - 465
Target Start/End: Original strand, 8825008 - 8825150
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 422  Q
    ||||||| |||||||||||||||||||||||| ||||||  | || |||||||||||||||| |  | ||| |||| ||||||| |||||||| ||||||    
T  8825008 tctttaatactcactctcttattggtttaaattattgtgagtgtagactttgaaaattgaacccgcataaaatggtgggacatatattgatttcatctaa 8825107  T
Q  423 taaaagagtgtaaatactagagag--tgttgaaaagtgagtgttg 465  Q
    |||||| |||  | ||||||||||   ||||||||||||||||||    
T  8825108 taaaagggtg--agtactagagagatggttgaaaagtgagtgttg 8825150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 5452099 - 5452240
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||| ||||||||||| |||||||| ||| |  ||||||||| ||||||||||  |  |||||||||| ||| |||||||||||| ||| ||||||||||    
T  5452099 actcgctctcttattgatttaaatccttggg--tctacacttagaaaattgaatccacacaaagtggtgggaaatacattgatttcatccaataaaagag 5452196  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    || |  |   ||||||||||||||||||||||||||||| ||||    
T  5452197 tgaatgttaaagagagtgttgaaaagtgagtgttgctagcattc 5452240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 22604702 - 22604602
Alignment:
Q  332 ctcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 431  Q
    |||||||||||||  |||||||||||||||  |||||| ||||||||||||||||  ||||| |||| ||||||||||| |||||||| |||||| ||||    
T  22604702 ctcactctcttataagtttaaatcattgtgagtctacattttgaaaattgaactcccacaaaatggtgggacatacattaattttatccaataaatgagt 22604603  T
Q  432 g 432  Q
    |    
T  22604602 g 22604602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 331 - 468
Target Start/End: Original strand, 55452052 - 55452187
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||| | |||||||||||||||| ||  ||||||||||| |||| |||| |  |||||||||| ||||||||||  |||  ||| ||||||||||    
T  55452052 actcactctttcattggtttaaatcattatgagtctacactttggaaatagaacccacacaaagtggtgggacatacatgtattccatccaataaaagag 55452151  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgcta 468  Q
    ||  | ||| |||||||||| |||||||||||||||||    
T  55452152 tg--agtaccagagagtgttcaaaagtgagtgttgcta 55452187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 19345047 - 19345132
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 426  Q
    |||||||||||||||||||||  |||||| |||||||||||||| |  |||||||||| |||||||||||||||| ||| ||||||    
T  19345047 ttattggtttaaatcattgtgagtctacaatttgaaaattgaaccccaacaaagtggtgggacatacattgatttcatccaataaa 19345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 331 - 467
Target Start/End: Original strand, 50156697 - 50156831
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||| |   |||||| || | ||||||||| |||| ||  ||||||  |     
T  50156697 actcactctcttattggtttaaatcattgtgggtctacacttttaaaattgaacccccgcaaagttgtggaacatacattaatttcattcaataaataa- 50156795  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgct 467  Q
     |||| ||  |||| ||||||||||||||||||||||    
T  50156796 -gtaagtatcagagtgtgttgaaaagtgagtgttgct 50156831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 338 - 474
Target Start/End: Complemental strand, 29755636 - 29755500
Alignment:
Q  338 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaat 437  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |  ||||||| ||   ||||| ||||||| |||   |||||||||||    |    
T  29755636 ctcttattggtttaaatcattgttgatctacactttgaaaattgaacccacacaaagtagtgaaacatatattgattctattcgataaaagagtgggtgt 29755537  T
Q  438 actagagagtgttgaaaagtgagtgttgctagtattc 474  Q
       ||||| ||||||||||||||||||||||| ||||    
T  29755536 taaagagaatgttgaaaagtgagtgttgctagcattc 29755500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 52123993 - 52124077
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 415  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |  ||||| | || ||||||||||| ||||    
T  52123993 actcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacccccacaaaatagtgggacatacattaattt 52124077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 14236162 - 14236061
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| | |||||||| ||||| ||||||||||||||||||| |||| ||||||  | |||||||| ||||||| |||||||| ||| ||||||| ||    
T  14236162 actcacttttttattggtctaaattattgtggatctacactttggaaatagaactcgcataaagtggtgggacatatattgatttcatccaataaaatag 14236063  T
Q  431 tg 432  Q
    ||    
T  14236062 tg 14236061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 50056966 - 50056893
Alignment:
Q  40 gctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 113  Q
    |||||||| ||| ||||||||| || ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  50056966 gctctgataccatgtgaaaactgaatattatatttcagagataaataatgtacaaccactaatgtgtttatata 50056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 343 - 431
Target Start/End: Original strand, 26310495 - 26310583
Alignment:
Q  343 attggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 431  Q
    |||||||||||||||| ||| |||||||||||||||||||||    | ||| |||| |||||||||||||||| ||| |||||||||||    
T  26310495 attggtttaaatcattatgggtctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagt 26310583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 410
Target Start/End: Original strand, 10948589 - 10948676
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    ||||||| ||||||||| |||||||||||||||||||||| | |||||||| ||||||||||    |||||||||| | |||||||||    
T  10948589 tctttaatactcactcttttattggtttaaatcattgtgggtttacactttaaaaattgaacaaacacaaagtggtggaacatacatt 10948676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 469
Target Start/End: Complemental strand, 27243189 - 27243050
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||||| ||||| |||||||| ||||| || ||||||||| |||| |||| |  | |||||||| |||||| ||||||||||||| |||||||||    
T  27243189 actcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaagtggtgggacatgcattgattttatccaataaaaga 27243090  T
Q  430 gtgtaaatactagagagtgttgaaaagtgagtgttgctag 469  Q
    |||    |   |||||||||| ||||| ||||||||||||    
T  27243089 gtgagtgttagagagagtgttcaaaagagagtgttgctag 27243050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 24429062 - 24429124
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaa 393  Q
    ||||||| | ||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  24429062 actcactattttattggtttaaatcattgtggatctacactttaaaaattgaaccctcacaaa 24429124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 28095952 - 28096039
Alignment:
Q  25 cccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaa-aatgcacaactactaatgtgtttatata 113  Q
    ||||||||||| |||||||  |||||| |||||||| ||| |||||||||||||||||||| |||  ||||| |||||||||||||||||    
T  28095952 cccccaagatcgggagctc--atgccatgtgaaaacaaaatattatatttcagagataaaataatttacaaccactaatgtgtttatata 28096039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 366 - 476
Target Start/End: Complemental strand, 30624739 - 30624631
Alignment:
Q  366 tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttg 465  Q
    |||| ||||||||||||||||  ||||||||||   ||||||||| |||||||  ||||||||||||  | |  ||||||||| | ||||||||||||||    
T  30624739 tacattttgaaaattgaactcacacaaagtggtgaaacatacattaattttattcaataaaagagtg--agtgttagagagtgctcaaaagtgagtgttg 30624642  T
Q  466 ctagtattcat 476  Q
    |||| ||||||    
T  30624641 ctagcattcat 30624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 325 - 376
Target Start/End: Original strand, 38138613 - 38138664
Alignment:
Q  325 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaa 376  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  38138613 tttaatacttactctcttattggtttaaatcattgtggatctatactttgaa 38138664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 331 - 469
Target Start/End: Complemental strand, 41387704 - 41387568
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||| ||||||||| | |||||||||||||| ||| ||||||||||||| ||| |  ||||| | ||  || |||||| ||||| ||| |||||| |||    
T  41387704 actcaatctcttatttgattaaatcattgtgggtctgcactttgaaaattaaacccacacaaaatagtgtgatatacatcgatttaatccaataaatgag 41387605  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctag 469  Q
    ||  | | ||||||||||||||| | |||||||||||||    
T  41387604 tg--agtgctagagagtgttgaataatgagtgttgctag 41387568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 341 - 415
Target Start/End: Complemental strand, 49072138 - 49072064
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 415  Q
    |||||||||||||| ||||||| ||||||||||||||||  ||||| |||||||||||  |||||| ||| ||||    
T  49072138 ttattggtttaaattattgtgggtctacactttgaaaatataactcatacaaagtggtgagacataaattaattt 49072064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 323 - 461
Target Start/End: Complemental strand, 138914 - 138778
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 422  Q
    ||||||| ||| ||||| |||||| |||||||||||||   | |||| ||| |||||||||  | |||||| ||||  ||||||||||||||| ||  ||    
T  138914 tctttaatacttactcttttattgatttaaatcattgtaagtttacattttaaaaattgaatacatacaaaatggtgagacatacattgatttcattcaa 138815  T
Q  423 taaaagagtgtaaatactagagagtgttgaaaagtgagt 461  Q
    ||||||||||  | | ||||||||| ||||||| |||||    
T  138814 taaaagagtg--agtgctagagagtcttgaaaactgagt 138778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 7419241 - 7419316
Alignment:
Q  357 ttgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||| |||| ||||||  ||||| | |  ||||||| ||| |||||||||||||||||||||    
T  7419241 ttgtggatctacactttggaaatagaactcacacaaaatagagggacatatatttattttatctaataaaagagtg 7419316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 331 - 426
Target Start/End: Original strand, 15790407 - 15790501
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 426  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||  |    | ||| ||||  ||||||||||||||||||| ||||||    
T  15790407 actcactctcttattggtttaaatcattatgg-cctacactttgaaaattgtcccaccataaaatggtgagacatacattgattttatccaataaa 15790501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 22856282 - 22856325
Alignment:
Q  342 tattggtttaaatcattgtggatctacactttgaaaattgaact 385  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  22856282 tattggtttaaataattgtggatctacactttgaaaattaaact 22856325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 331 - 429
Target Start/End: Complemental strand, 44844125 - 44844026
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||| | ||||||| |||||||||||||| || |||||||| ||||||||||||  |  || |||| ||||||||||| |||||||  |||||||||    
T  44844125 actcacttttttattggattaaatcattgtgggtcatacactttaaaaattgaactcacatgaaatggtgggacatacatttattttattcaataaaaga 44844026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 50661568 - 50661659
Alignment:
Q  341 ttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 431  Q
    ||||||| |||||||| ||||| || |||| |||| |||| |||| |  | |||||||| |||||| |||||||||||||||||||||||||    
T  50661568 ttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgggacatgcattgattttatctaataaaagagt 50661659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 405
Target Start/End: Complemental strand, 752535 - 752461
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacat 405  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||  |||| |||| |  |||||||||| ||||||    
T  752535 actcattctcttattagtttaaatcattgtgggtctacactttagaaatagaacccacacaaagtggtgggacat 752461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 29388634 - 29388684
Alignment:
Q  334 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    |||||||||||||  |||||||||||||  |||||||||||||||||||||    
T  29388634 cactctcttattgacttaaatcattgtgagtctacactttgaaaattgaac 29388684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 336 - 410
Target Start/End: Complemental strand, 39186102 - 39186028
Alignment:
Q  336 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||| ||||||  | ||||||||  ||||||||||    
T  39186102 ctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacatt 39186028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 43016556 - 43016502
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaact 385  Q
    |||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||    
T  43016556 actcactctcttattgatttaaatcattatgaatctatactttaaaaattgaact 43016502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 50057325 - 50057279
Alignment:
Q  1 ctagggtttatgcggaaacaagaccccccaagatcaggagctctgat 47  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  50057325 ctagggtttatgcggaagcaacaccccccaagatcgggagctctgat 50057279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 469
Target Start/End: Complemental strand, 13809219 - 13809087
Alignment:
Q  337 tctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaa 435  Q
    ||||||||||| ||||| || ||||| || || |||||| |||| |||| |  | ||| |||| |||||||||||||||||||| |||||||||||| ||    
T  13809219 tctcttattgggttaaaacaatgtgggtcatatactttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaagagtg-aa 13809121  T
Q  436 atactagagagtgttgaaaagtgagtgttgctag 469  Q
     |   |||||||||  ||||| ||||||||||||    
T  13809120 gttagagagagtgtgtaaaagagagtgttgctag 13809087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 40702173 - 40702289
Alignment:
Q  345 tggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagag 444  Q
    |||||||||| | |||||||| | ||||| |||||||||| |  | |||||| | |  |||||||| |||| |||  ||||||||||  || | ||||||    
T  40702173 tggtttaaattactgtggatcaaaactttaaaaattgaacccacataaagtgatggatcatacattaatttcatcatataaaagagt--aagtgctagag 40702270  T
Q  445 agtgttgaaaagtgagtgt 463  Q
    |||||||||||||||||||    
T  40702271 agtgttgaaaagtgagtgt 40702289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 432
Target Start/End: Original strand, 41707490 - 41707577
Alignment:
Q  345 tggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||| ||||||| |||| ||||| |||||||||| |  |||||||| |   |||||||||||||||||| ||| | ||||||    
T  41707490 tggtttaaattattgtgggtctatactttaaaaattgaacccacacaaagtgatgaaacatacattgattttatccaatgagagagtg 41707577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 432
Target Start/End: Original strand, 43657067 - 43657134
Alignment:
Q  365 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  43657067 ctacactttggaaatggaactcacataaagtggtgggacatacattgatttcatcaaataaaatagtg 43657134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 50061429 - 50061382
Alignment:
Q  66 attatatttcagagataaaaaatgcacaactactaatgtgtttatata 113  Q
    ||||||||||||||||||| |||| | ||| |||||||||||||||||    
T  50061429 attatatttcagagataaataatgtagaacgactaatgtgtttatata 50061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 742099 - 742057
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacacttt 373  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  742099 actcattctcttattagtttaaatcattgtgggtctacacttt 742057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 468
Target Start/End: Original strand, 40715879 - 40716036
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||||||||| || ||||| | ||| |||| |||| ||||||||||||||   || ||| ||| |||||||||| |  |||||||| |  | ||||||||    
T  40715879 ttttaaacatattttttaatattcaatctcctattagtttaaatcattgtatgtcaacattttaaaaattgaacccacacaaagtgatgagtcatacatt 40715978  T
Q  411 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgcta 468  Q
     |||| | |  |||||||||||  | | ||  ||||||||||||||||||||||||||||    
T  40715979 aatttcaccatataaaagagtg--agtgctagagagagtgttgaaaagtgagtgttgcta 40716036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 41607544 - 41607499
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactc 386  Q
    |||||| ||||||| | ||||||||||||||||||||||| |||||    
T  41607544 ttattgatttaaataactgtggatctacactttgaaaattaaactc 41607499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 432
Target Start/End: Complemental strand, 42340958 - 42340873
Alignment:
Q  347 gtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||| ||| ||||||||||||| | |   |||||||||||  ||||| |||| || |  |||||||||||||||    
T  42340958 gtttaaatcattgtgggtctgcactttgaaaattaagccaatacaaagtggtgagacatgcatttatatcttctaataaaagagtg 42340873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 432
Target Start/End: Original strand, 46237143 - 46237184
Alignment:
Q  391 aaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||| |||||||||||||||| ||| ||||||||||||    
T  46237143 aaagtggtgggacatacattgatttcatccaataaaagagtg 46237184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 2e-36; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 331 - 469
Target Start/End: Complemental strand, 34905479 - 34905341
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||||||| |||||||||||||||| ||| ||||||||||    
T  34905479 actcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagag 34905380  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctag 469  Q
    ||    |   ||||||||||||||| |||||||||||||    
T  34905379 tgagtgttagagagagtgttgaaaaatgagtgttgctag 34905341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 334 - 426
Target Start/End: Original strand, 16852013 - 16852105
Alignment:
Q  334 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 426  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||||| |||| ||||||||||    
T  16852013 cactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccctacaaagtggtgggacatacatttatttcatctaataaa 16852105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 324 - 464
Target Start/End: Original strand, 10133188 - 10133328
Alignment:
Q  324 ctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaat 423  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |  | |||||||| ||||||||| | |||| ||| |||    
T  10133188 ctttaatactcactcttttattggtttaaatcattgtggttctacactttgaaaattgaacccccataaagtggtgggacatacaataatttcatccaat 10133287  T
Q  424 aaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 464  Q
    ||| |||||    |   ||||||||||||||||||||||||    
T  10133288 aaatgagtgagtgttagagagagtgttgaaaagtgagtgtt 10133328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 445961 - 445818
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||| |||||||||||||||||||||||||  |||| |||||||||||||||| |  ||||||||||  ||||||||||||||| ||| ||||||| ||    
T  445961 actcattctcttattggtttaaatcattgtgactctagactttgaaaattgaacccacacaaagtggtgtgacatacattgatttcatccaataaaaaag 445862  T
Q  431 tgtaaatactagag--agtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | | ||||||  ||||||||||| ||||| ||||||| ||||    
T  445861 tg--agtgctagagatagtgttgaaaaatgagtattgctagcattc 445818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 333 - 432
Target Start/End: Complemental strand, 5106439 - 5106340
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||| ||||||||||||||| |||||| | ||||||||||||||||| | |  |||||||||| |||||||||||||||||||| ||||||| ||||    
T  5106439 tcactctattattggtttaaatccttgtgggtgtacactttgaaaattgatcccacacaaagtggtgggacatacattgattttatccaataaaaaagtg 5106340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 331 - 466
Target Start/End: Original strand, 31116161 - 31116296
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||| |||| |  ||||||| || |||||||||||||||| ||| |||| |||||    
T  31116161 actcactctcttattggtttaaatcattgtgggtttacacattggaaatagaacacacacaaagtagtgggacatacattgatttcatccaatagaagag 31116260  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgc 466  Q
    || |  |   |||||||||| |||||||||||||||    
T  31116261 tgaatgttagagagagtgttcaaaagtgagtgttgc 31116296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 21987435 - 21987334
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||  | |||||||| ||| |||||||||||| ||| ||||||| ||    
T  21987435 actcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggatatacattgatttcatccaataaaatag 21987336  T
Q  431 tg 432  Q
    ||    
T  21987335 tg 21987334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 331 - 464
Target Start/End: Complemental strand, 1392770 - 1392640
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| |||||||||| | |||||||| ||  ||||||||||||||| ||| ||||||| |     
T  1392770 actcactctcttattggtttaaatcattgtgg-gctacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaaaaat 1392672  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgtt 464  Q
     |  | | |||||||||||| |||||||||||||    
T  1392671 ag--agtgctagagagtgttaaaaagtgagtgtt 1392640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 341 - 426
Target Start/End: Complemental strand, 32122928 - 32122843
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 426  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||  ||||| |||| ||||||| |||||||| ||| ||||||    
T  32122928 ttattggcttaaatcattgtgggtctacactttgaaaattgaactcccacaaaatggtgggacatatattgatttcatccaataaa 32122843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 32598965 - 32599086
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    ||||||||||| ||||||| ||||||||| |||||| |||||||||||||| |||||||||||| |||| | || |  |||||||||  ||||||||||     
T  32598965 ttttaaacattctctttaatactcactcttttattgatttaaatcattgtgaatctacactttggaaatagcacccacacaaagtggcgggacatacatg 32599064  T
Q  411 gattttatctaataaaagagtg 432  Q
     |||  ||| ||||||||||||    
T  32599065 tattccatccaataaaagagtg 32599086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 32112734 - 32112850
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||||| ||| ||| | |||||||||||||| ||||||||||||||||||||||||||||||||  ||| |  ||||| ||||  ||||| ||||    
T  32112734 ttttgaacattctctctaatattcactctcttattgttttaaatcattgtggatctacactttgaaaataaaacccacacaaaatggtgtgacatgcatt 32112833  T
Q  411 gattttatctaataaaa 427  Q
    ||||| ||| |||||||    
T  32112834 gatttcatccaataaaa 32112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 12780805 - 12780892
Alignment:
Q  340 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||    ||||||| ||  ||||||||||||||  | |||||||||    
T  12780805 cttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtagtgagacatacattgattccacctaataaaa 12780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 337 - 414
Target Start/End: Original strand, 12784982 - 12785059
Alignment:
Q  337 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatt 414  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||   | ||||| ||  ||||||||||||||    
T  12784982 tctcttattggtttaaatcattatggatctacactttgaaaattgaactaacataaagtagtaagacatacattgatt 12785059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 2676038 - 2675937
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| | ||||||||||||| |||||||| |||||| |||||||||| |||    |||||||||| ||||||||||||| || ||  ||||||||||    
T  2676038 actcacttttttattggtttaaaccattgtgggtctacattttgaaaattaaacctaaacaaagtggtgggacatacattgaattcattcaataaaagag 2675939  T
Q  431 tg 432  Q
    ||    
T  2675938 tg 2675937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 16187469 - 16187523
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaact 385  Q
    |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||    
T  16187469 actcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaact 16187523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 16187687 - 16187741
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaact 385  Q
    |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||    
T  16187687 actcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaact 16187741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 341 - 469
Target Start/End: Original strand, 35128769 - 35128898
Alignment:
Q  341 ttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatac 439  Q
    ||||||| | |||||| ||| ||| ||||||||||||||| |||| |  | |||||||| |||||||||||||||||| | ||||||||||||  | | |    
T  35128769 ttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacatacattgattttacccaataaaagagtg--actgc 35128866  T
Q  440 t--agagagtgttgaaaagtgagtgttgctag 469  Q
    |  |||||||||| ||||| ||||||||||||    
T  35128867 tagagagagtgttcaaaagagagtgttgctag 35128898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 19090251 - 19090353
Alignment:
Q  331 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||| ||||||||| || ||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | | |||||||||    
T  19090251 actcactcttttattggttgaattcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaga 19090350  T
Q  430 gtg 432  Q
    |||    
T  19090351 gtg 19090353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 17144700 - 17144757
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaatt 380  Q
    ||||||| ||| ||||  ||||| |||||||||||||||| |||||||||||||||||    
T  17144700 tctttaatacttactcctttattagtttaaatcattgtgggtctacactttgaaaatt 17144757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 34882267 - 34882300
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggat 364  Q
    ||||||||||||||||||||||||||||||||||    
T  34882267 actcactctcttattggtttaaatcattgtggat 34882300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 12753797 - 12753940
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||| |||| ||||| |||||||||||||||  | |||||  ||||||| |||| |  |||||||||| |||||| |||  |||||||| ||| ||||||    
T  12753797 actcgctcttttattagtttaaatcattgtgagtgtacaccctgaaaatagaacccacacaaagtggtgggacatgcatgtattttatccaatgaaagag 12753896  T
Q  431 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    || |   || || |||||||| |||||||||||||||||| ||||    
T  12753897 tgattgcta-taaagagtgttcaaaagtgagtgttgctagcattc 12753940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 8441886 - 8441941
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactc 386  Q
    ||||||||| ||||||||||| || ||||  | |||||||||||||||||||||||    
T  8441886 actcactcttttattggtttagattattgaaggtctacactttgaaaattgaactc 8441941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 8450690 - 8450745
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactc 386  Q
    ||||||||| ||||||||||| || ||||  | |||||||||||||||||||||||    
T  8450690 actcactcttttattggtttagattattgaaggtctacactttgaaaattgaactc 8450745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 474
Target Start/End: Complemental strand, 12753791 - 12753758
Alignment:
Q  441 agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    |||||||||||||||| |||||||||||||||||    
T  12753791 agagagtgttgaaaagagagtgttgctagtattc 12753758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 3e-35; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 311 - 431
Target Start/End: Complemental strand, 39471320 - 39471200
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    |||||||||| |||||||||||    
T  39471320 ttttaaacattctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaagattgaaccaacacaaagtggtgggacatacatt 39471221  T
Q  411 gattttatctaataaaagagt 431  Q
    ||||| |||||||||||||||    
T  39471220 gatttcatctaataaaagagt 39471200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 323 - 468
Target Start/End: Complemental strand, 43771277 - 43771132
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 422  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||| |||||| |||||||||||||||| ||| ||    
T  43771277 tctttaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacacagagtggtgggacatacattgatttcatccaa 43771178  T
Q  423 taaaagagtg-taaatactagagagtgttgaaaagtgagtgttgcta 468  Q
    ||||||||||    |||  |||||||||| |||||||||||||||||    
T  43771177 taaaagagtgagtcata-gagagagtgttcaaaagtgagtgttgcta 43771132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 331 - 471
Target Start/End: Complemental strand, 20454681 - 20454543
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    ||||||||  ||||||||||||||||||||||||||||||||    
T  20454681 actcactctgttattgatttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtg--tggacatacattgattttatctaataaaagag 20454584  T
Q  431 tgtaaatact--agagagtgttgaaaagtgagtgttgctagta 471  Q
    ||  | | ||  ||||||||||||||||| |||||||||||||    
T  20454583 tg--agtgctagagagagtgttgaaaagtaagtgttgctagta 20454543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 333 - 465
Target Start/End: Original strand, 10169684 - 10169814
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||||| ||||||||||||   ||||||||||||||||  |||||||||| ||||||| |||||||| ||| ||||| ||||||    
T  10169684 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtaggacatatattgatttcatccaataatagagtg 10169783  T
Q  433 taaatactagagagtgttgaaaagtgagtgttg 465  Q
      |||| |||||||||||||||||||| |||||    
T  10169784 --aatattagagagtgttgaaaagtgaatgttg 10169814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 331 - 469
Target Start/End: Complemental strand, 8109099 - 8108961
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    ||||| | || |||||||||||||||| | | ||||||||||    
T  8109099 actcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacaaacacaaattagtgggacatacattgatttcacccaataaaagag 8109000  T
Q  431 tgtaaatact--agagagtgttgaaaagtgagtgttgctag 469  Q
    ||  | | ||  |||||||||||||||||||||||||||||    
T  8108999 tg--agtgctagagagagtgttgaaaagtgagtgttgctag 8108961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 332 - 474
Target Start/End: Complemental strand, 50164537 - 50164395
Alignment:
Q  332 ctcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 431  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||||| |  ||||| |||| ||| |||||||||||||||| |||||| ||||    
T  50164537 ctcactttcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaaatggtgggagatacattgattttatccaataaatgagt 50164438  T
Q  432 gtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    |  | | ||  |||||||||| ||||||||||||| |||||||||    
T  50164437 g--agtgctagagagagtgttaaaaagtgagtgttactagtattc 50164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 722300 - 722199
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||   |||||||||| |||||||| ||||||| ||| ||||||| ||    
T  722300 actcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgatttcatccaataaaaaag 722201  T
Q  431 tg 432  Q
    ||    
T  722200 tg 722199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 47009332 - 47009231
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||  |||| ||||| |||||||| ||||||||||    
T  47009332 actcactttcttattggtttaaatcattgtgtatctacactttgaaaattgaactcacacaaagcggtgagacaaacattaattttatccaataaaagag 47009233  T
Q  431 tg 432  Q
    ||    
T  47009232 tg 47009231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 33653526 - 33653669
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| ||||||||||||||||||||||||||| | | |||||||||||||  |  ||||| |||| |||||||||||||||| ||| |||||| |||    
T  33653526 actcactttcttattggtttaaatcattgtggatcaatattttgaaaattgaaaccccacaaaatggtgggacatacattgatttcatcaaataaatgag 33653625  T
Q  431 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    || | ||||  ||||||||||||||| ||||||||||||| ||||    
T  33653626 tgattaata-gagagagtgttgaaaactgagtgttgctagcattc 33653669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 338 - 474
Target Start/End: Complemental strand, 49077385 - 49077249
Alignment:
Q  338 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaat 437  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||| ||||||| ||| |||||||||||||||||| ||  | |    
T  49077385 ctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatatattaattttatctaataaaagaatg--agt 49077288  T
Q  438 act--agagagtgttgaaaagtgagtgttgctagtattc 474  Q
     ||  ||||| ||||||||| ||||||||||||| ||||    
T  49077287 gctaaagagaatgttgaaaactgagtgttgctagcattc 49077249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 754617 - 754718
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||   |||||||||| |||||||| |||| || ||| ||||||| ||    
T  754617 actcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgagttcatccaataaaaaag 754716  T
Q  431 tg 432  Q
    ||    
T  754717 tg 754718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 336 - 474
Target Start/End: Original strand, 20225383 - 20225519
Alignment:
Q  336 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaa 435  Q
    ||||||||||||||||||||||||||  ||||||||||| |||| |||| |  | |||||||| |||||| ||| ||||  ||| ||||||||||||  |    
T  20225383 ctctcttattggtttaaatcattgtgagtctacactttggaaatagaacccacaaaaagtggtgggacatgcatggattccatccaataaaagagtg--a 20225480  T
Q  436 atactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
     | |||||||||||| |||||||||||||||||| ||||    
T  20225481 gtgctagagagtgttcaaaagtgagtgttgctagcattc 20225519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 333 - 427
Target Start/End: Complemental strand, 24834719 - 24834625
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||| |  ||||| |||| |||||||||||||||  ||| |||||||    
T  24834719 tcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacccacacaaaatggtgggacatacattgattccatccaataaaa 24834625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 26361345 - 26361480
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||| |  ||||| |||| || |||||||||| || ||| ||||||||||    
T  26361345 actcactcacttattggtttaaatcattatgggtctacactttgaatattgaacccacacaaaatggtgggtcatacattgacttcatccaataaaagag 26361444  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    |||         ||||||||||||||||||||||||||| ||||    
T  26361445 tgt--------tagagtgttgaaaagtgagtgttgctagcattc 26361480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 24938432 - 24938553
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||| ||||| ||| ||| |||||||||||||||||||||||||| | |||||||||| |||||||||  |  ||||| |||| |||||||||||    
T  24938432 ttttcaacactttctctaatacttactctcttattggtttaaatcattgtaggtctacactttaaaaattgaatccaaacaaaatggtgggacatacatt 24938531  T
Q  411 gattttatctaataaaagagtg 432  Q
    ||||  ||| ||||||||||||    
T  24938532 gattacatccaataaaagagtg 24938553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 333 - 432
Target Start/End: Original strand, 50481584 - 50481683
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||| |||  | |||||||||||  ||||||| ||||||| ||| ||||||||||||    
T  50481584 tcactctcttattggtttaaatgattgtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacatactttgatttcatccaataaaagagtg 50481683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 49242313 - 49242212
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |  |||||||| | ||||||| |||||||| ||| ||| ||| ||    
T  49242313 actcattctcttattggtttaaatcattgtgaatctacacattgaaaattgaacccacacaaagtgatgggacatatattgatttcatccaattaaaaag 49242214  T
Q  431 tg 432  Q
    ||    
T  49242213 tg 49242212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 22542530 - 22542424
Alignment:
Q  325 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 424  Q
    ||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||||| |  |||||||||| | |||||| ||||||| ||  ||||    
T  22542530 tttaatactcactctcttattagtttaaatcattgtgggactattctttgaaaattgaacccacacaaagtggtggaacatactttgatttcattcaata 22542431  T
Q  425 aaagagt 431  Q
    |||||||    
T  22542430 aaagagt 22542424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 311 - 464
Target Start/End: Original strand, 19937189 - 19937341
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    ||||||||| | |||||||  |||||||| || ||||||| ||||||||| |||||| ||||||||||| ||||||  | | | |||| |||||||||||    
T  19937189 ttttaaacactctctttaattctcactcttttgttggtttgaatcattgtcgatctatactttgaaaatagaactcacatataatggtgggacatacatt 19937288  T
Q  411 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 464  Q
    |||| |||| ||| ||| | | ||||| ||||||||  || |||||||||||||    
T  19937289 gattgtatccaattaaaaaat-taaatgctagagagaatttaaaagtgagtgtt 19937341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 34129437 - 34129538
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||| ||||||||||||| |||||||  || |||||||||||||||||| |  |||||||||| ||| |||||||||| | ||| |||| |||||    
T  34129437 actcactcttttattggtttaaaccattgtgagtccacactttgaaaattgaacacacacaaagtggtgggatatacattgatctcatccaatagaagag 34129536  T
Q  431 tg 432  Q
    ||    
T  34129537 tg 34129538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 52671993 - 52671872
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    ||||||||| | ||||||| ||||||| ||||||| ||||||||||||| | || |||||||| |||||||||||   | ||| |||| |||||||||||    
T  52671993 ttttaaacactctctttaatactcactatcttattagtttaaatcattgagaatttacactttaaaaattgaacttacataaaatggtgggacatacatt 52671894  T
Q  411 gattttatctaataaaagagtg 432  Q
     |||| ||| ||||||| ||||    
T  52671893 tatttcatccaataaaaaagtg 52671872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 37451030 - 37451149
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||||||||  |||| ||| ||||||||| ||||||||||||||||||| |  |||||||||||||||| ||||||  ||||| ||||  ||  |||||     
T  37451030 ttttaaacaccttctctaatactcactcttttattggtttaaatcattgcgagtctacactttgaaaatagaactc--acaaattggtaagatgtacatg 37451127  T
Q  411 gattttatctaataaaagagtg 432  Q
    |||| |||| ||||||||||||    
T  37451128 gattctatccaataaaagagtg 37451149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 334 - 432
Target Start/End: Original strand, 48339380 - 48339478
Alignment:
Q  334 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||| ||||||||||||| |||| ||| ||||| ||||||||||||||| |  |||||||||| | ||||||||||||||  || ||||| ||||||    
T  48339380 cactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtg 48339478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 432
Target Start/End: Complemental strand, 38636472 - 38636379
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||| | |||||||||||||||||||||||| ||||||  || |  | ||||| ||  ||||||||||||||||||| ||||||||||||    
T  38636472 tcttattgatataaatcattgtggatctacactttaaaaattagacccacataaagtagtgagacatacattgattttatcaaataaaagagtg 38636379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 31250924 - 31251015
Alignment:
Q  335 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 426  Q
    ||||| |||||| ||||||||||||||| |||||| ||||||||||||||    | ||| |||| |||||||||||||||| ||| ||||||    
T  31250924 actcttttattgatttaaatcattgtgggtctacattttgaaaattgaacgtccataaaatggtgggacatacattgatttcatccaataaa 31251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 38537560 - 38537649
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttg---aaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    |||||| ||||||||||| || ||||||||||||   |||||||||||| |||||||| ||  ||||||||||||||| ||| |||||||    
T  38537560 ttattgatttaaatcattatgaatctacactttgttgaaaattgaactcatacaaagtagtaagacatacattgatttcatcaaataaaa 38537649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 45310989 - 45311078
Alignment:
Q  335 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 424  Q
    |||||||||||| |||||||||||||   ||| ||||||||||||||||  |  |||||||||| ||||||| |||||||| ||| ||||    
T  45310989 actctcttattgatttaaatcattgtaagtcttcactttgaaaattgaatccccacaaagtggtgggacatatattgatttcatccaata 45311078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 11393209 - 11393149
Alignment:
Q  53 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 113  Q
    ||||||||| || ||||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  11393209 gtgaaaacttaatattatatttcagagataaataatgtacaaccactgatgtgtttatata 11393149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 11402936 - 11402876
Alignment:
Q  53 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 113  Q
    ||||||||| || ||||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  11402936 gtgaaaacttaatattatatttcagagataaataatgtacaaccactgatgtgtttatata 11402876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 40991626 - 40991769
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||| |||||||||||||||||||||| |||||||||   |||| |  |   ||||| | ||| ||||||| |||||||| ||| ||| ||||||    
T  40991626 actcactcttttattggtttaaatcattgtgggtctacacttcagaaatagtgccaatacaatggggtgggacatatattgatttcatccaatgaaagag 40991725  T
Q  431 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||    |||  ||||||||||||||||||||||||||||| ||||    
T  40991726 tgagtgata-gagagagtgttgaaaagtgagtgttgctagcattc 40991769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 350 - 465
Target Start/End: Original strand, 46242000 - 46242113
Alignment:
Q  350 taaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgt 449  Q
    ||||||||||||| |||| | ||||||||||||||    ||||| |||| ||||||||| |||||| |||  |||||  ||||| | | |||||||||||    
T  46242000 taaatcattgtgggtctatattttgaaaattgaacctacacaaaatggtgggacatacaatgatttcatcccataaa--agtgtgagttctagagagtgt 46242097  T
Q  450 tgaaaagtgagtgttg 465  Q
    | ||||||||||||||    
T  46242098 taaaaagtgagtgttg 46242113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 5044587 - 5044678
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||||||||||| |||||| |||||| ||| ||||||||||||  ||||| | ||  |||||| |||||||| ||| ||||||| ||||    
T  5044587 ttattggtttaaatcgttgtgggtctacattttaaaaattgaactcacacaaaatagtgtgacatatattgatttcatccaataaaaaagtg 5044678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 49682838 - 49682929
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||  ||||| |||||||||||||||||||| ||  | ||||||||  || |||||||||||| |||  |||||| ||||    
T  49682838 ttattggtttaaatcgatgtggctctacactttgaaaattgaattcaaataaagtggtgagatatacattgatttcatccgataaaaaagtg 49682929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 353 - 468
Target Start/End: Complemental strand, 50571985 - 50571870
Alignment:
Q  353 atcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact--agagagtgtt 450  Q
    ||||||| || ||||||||||||||||||||  |  | ||| || | || ||||||||||||| |||||||||||||  |||| | ||  ||||||||||    
T  50571985 atcattgcgggtctacactttgaaaattgaagccacataaattgatggggcatacattgatttcatctaataaaaga--gtaagtgctagagagagtgtt 50571888  T
Q  451 gaaaagtgagtgttgcta 468  Q
    ||||||||| ||||||||    
T  50571887 gaaaagtgactgttgcta 50571870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 11895180 - 11895134
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaa 377  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  11895180 actcactctcttattcgttcaaatcattgtgggtctacactttgaaa 11895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 13070104 - 13069983
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacat 409  Q
    |||| |||||||||| ||| ||||||||| ||||||  | |||||| ||| ||| ||||||||||||||| |||| |  | |||||||| | ||||||||    
T  13070104 ttttgaacattttctctaacactcactcttttattgagtaaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtggaacatacat 13070005  T
Q  410 tgattttatctaataaaagagtg 432  Q
    |||||| | | ||||||||||||    
T  13070004 tgatttca-ccaataaaagagtg 13069983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 25719129 - 25719251
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggat-ctacactttgaaaattgaactcttacaaagtggttggacatacat 409  Q
    |||| |||| ||||| ||| ||||||||||| ||||| |||||||||||||| | ||||| |||| ||||  ||| |  | |||||||| ||||||||||    
T  25719129 ttttgaacaatttctctaatactcactctctgattgggttaaatcattgtgggtcctacattttggaaatgaaacccacataaagtggtgggacatacat 25719228  T
Q  410 tgattttatctaataaaagagtg 432  Q
    |||||| | | ||||| ||||||    
T  25719229 tgatttcaaccaataagagagtg 25719251  T

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Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 51206187 - 51206085
Alignment:
Q  331 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||| ||||||| | |||||| ||| ||| ||||| |||||||||  |||||  | |||||| | |||||||||||||||| |||||||||| ||    
T  51206187 actcactcttttattgggtgaaatcaatgtaggacctacattttgaaaatgaaactcacataaagtgatgggacatacattgatttcatctaataaatga 51206088  T
Q  430 gtg 432  Q
    |||    
T  51206087 gtg 51206085  T

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Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 416
Target Start/End: Complemental strand, 13520084 - 13520007
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatttt 416  Q
    |||||||||||||||||||||||| | ||||| ||| |||  |||| |  |||||||||| | |||||||||||||||    
T  13520084 tcttattggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgatttt 13520007  T

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Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 341 - 433
Target Start/End: Original strand, 18421878 - 18421968
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgt 433  Q
    ||||||||||||||||||||  ||  | ||||| |||||| ||| |  ||| |||||| |||||||||||||||| ||||||||||| |||||    
T  18421878 ttattggtttaaatcattgtaaatacatactttaaaaattaaacac--acacagtggtgggacatacattgatttcatctaataaaaaagtgt 18421968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 391 - 432
Target Start/End: Original strand, 21776942 - 21776983
Alignment:
Q  391 aaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  21776942 aaagtggtaggacatacattgattttatccaataaaagagtg 21776983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 465
Target Start/End: Original strand, 33995985 - 33996106
Alignment:
Q  344 ttggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactaga 443  Q
    |||||||||| |||||||  | || | |||||||||||||| |  | ||||||||  ||||||||||||||| || ||||||||||||| |  |   |||    
T  33995985 ttggtttaaaccattgtgagtttaaattttgaaaattgaacccacaaaaagtggtgagacatacattgatttgatttaataaaagagtgaatgttagaga 33996084  T
Q  444 gagtgttgaaaagtgagtgttg 465  Q
    | ||||||||||| ||||||||    
T  33996085 gtgtgttgaaaagagagtgttg 33996106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 474
Target Start/End: Original strand, 47237812 - 47237921
Alignment:
Q  365 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtg 462  Q
    |||||||||||||||  ||||  || |||||||| ||||||| |||||||| ||| ||||||||||||  ||| ||  |||||||||| ||||| |||||    
T  47237812 ctacactttgaaaatgaaacttatataaagtggtgggacatatattgatttcatccaataaaagagtg--aatgctagagagagtgttcaaaagagagtg 47237909  T
Q  463 ttgctagtattc 474  Q
    ||| ||| ||||    
T  47237910 ttgatagcattc 47237921  T

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Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 30866999 - 30867070
Alignment:
Q  361 ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||||||||||||||| |||| |  | |||||||| ||||||||||| |||| ||| ||||||| ||||    
T  30866999 ggatctacactttgaaaatggaacccacataaagtggtgggacatacattaatttaatccaataaaaaagtg 30867070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 428
Target Start/End: Original strand, 50652375 - 50652470
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaag 428  Q
    ||||| |||||||| ||||||| |||||   |||||| ||||||||||||||    ||||||||||  || |||||||||||||||  ||||||||    
T  50652375 tcactttcttattgatttaaattattgtacgtctacattttgaaaattgaacctacacaaagtggtgagatatacattgattttatgcaataaaag 50652470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 333 - 415
Target Start/End: Original strand, 46536301 - 46536383
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 415  Q
    |||||||||||||| ||||||  | ||||| | |||||||||||||||||||    ||||||||||  |||||| ||||||||    
T  46536301 tcactctcttattgctttaaaatagtgtgggtttacactttgaaaattgaacatacacaaagtggtatgacatatattgattt 46536383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 52279298 - 52279348
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaa 383  Q
    |||||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  52279298 tcactctcctattgatctaaatcattgtgggtctaaactttgaaaattgaa 52279348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 46287573 - 46287532
Alignment:
Q  342 tattggtttaaatcattgtggatctacactttgaaaattgaa 383  Q
    ||||||||||||||||||||  || |||||||||||||||||    
T  46287573 tattggtttaaatcattgtgagtcaacactttgaaaattgaa 46287532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 432
Target Start/End: Complemental strand, 48608163 - 48608122
Alignment:
Q  391 aaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||| ||||||||||| |||||||| ||||||||||||    
T  48608163 aaagtggtgggacatacattaattttatccaataaaagagtg 48608122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 1e-34; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 292 - 432
Target Start/End: Original strand, 32211786 - 32211922
Alignment:
Q  292 attagcaacactctcttaattttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttaca 391  Q
    |||||||||||||||||    || |||| |||||||||   |||||||||||||||||||||||||||||| ||||||| || ||||||||||||  |||    
T  32211786 attagcaacactctctt----ttcaacactttctttaatgatcactctcttattggtttaaatcattgtgggtctacaccttaaaaattgaactcacaca 32211881  T
Q  392 aagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  32211882 aagtagttggacatacattgatttcatctaataaaagagtg 32211922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 41958226 - 41958085
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |  ||||| |||| |||||||||||||||| ||| |||||| |||    
T  41958226 actcactctcttattggtttaaatcactgtgggtctacactttgaaaattgaacccccacaaaatggtgggacatacattgatttcatccaataaatgag 41958127  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | | || ||||||||||||||||||||||| |||| ||||    
T  41958126 tg--agtgcttgagagtgttgaaaagtgagtgttactagcattc 41958085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 26980299 - 26980442
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||| ||||||||||||||||| || | ||||||||||||||||  ||||| |||| |||||||||||||||| ||| ||||| ||||    
T  26980299 actcactctcttattgatttaaatcattgtggatgtatattttgaaaattgaactcacacaaaatggtgggacatacattgatttcatccaataatagag 26980398  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||   ||   ||||||||||||||||||||||||| ||| ||||    
T  26980399 tgagtattagagagagtgttgaaaagtgagtgttgttagcattc 26980442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 316 - 426
Target Start/End: Complemental strand, 33193208 - 33193098
Alignment:
Q  316 aacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 415  Q
    |||| ||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| |||| | ||||||||||||||    
T  33193208 aacactttctctaatactcattctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccctcacaaaatggtggcacatacattgattt 33193109  T
Q  416 tatctaataaa 426  Q
     ||| ||||||    
T  33193108 catccaataaa 33193098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 30678948 - 30679049
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||||||||||| |  |||||||||| |||||||||||||||||||| | | ||||||    
T  30678948 actcactctcttattggcttaaatcattgtgagtctacactttgaaaattgaacccacacaaagtggtgggacatacattgattttatccattgaaagag 30679047  T
Q  431 tg 432  Q
    ||    
T  30679048 tg 30679049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 41948183 - 41948284
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||    |||||||||| | | |||||||||||||||| ||||||||||    
T  41948183 actcactctcttattgatttaaatcattgtggatttacactttgaaaattgaaccaacacaaagtggtagaatatacattgattttatccaataaaagag 41948282  T
Q  431 tg 432  Q
    ||    
T  41948283 tg 41948284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 19101638 - 19101739
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||    
T  19101638 actcactttcttattggtttaaatcattgcagatctacactttgaaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatag 19101737  T
Q  431 tg 432  Q
    ||    
T  19101738 tg 19101739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 2225367 - 2225226
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||| |||  |||| |  |||||||||| |||||||||||||||| ||| ||||||||||    
T  2225367 actcactttcttattggtttaaatcactgtcggtctacactttgtaaaccgaacccacacaaagtggtgggacatacattgatttcatccaataaaagag 2225268  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||    | ||||||||||||||||| |||||||| |||| ||||    
T  2225267 tg--ggtgctagagagtgttgaaaattgagtgttactagcattc 2225226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 339 - 474
Target Start/End: Original strand, 6325858 - 6325990
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaata 438  Q
    |||| |||||||| |||||||||| | |||||||||||||  ||||||  ||||| |||| ||||||||||||||||||| ||||||| |||||  | ||    
T  6325858 tcttgttggtttacatcattgtgggtttacactttgaaaaa-gaactcacacaaaatggtgggacatacattgattttatttaataaatgagtg--atta 6325954  T
Q  439 ctagagagtgttgaaaagtgagtgttgctagtattc 474  Q
     ||||||||||| ||||||||| |||||||||||||    
T  6325955 ttagagagtgttcaaaagtgagcgttgctagtattc 6325990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 334 - 474
Target Start/End: Complemental strand, 11987766 - 11987626
Alignment:
Q  334 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgt 433  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |  || ||||||| | ||||||||| |||| ||| |||||| || |      
T  11987766 cactctcttaatggtttaaatcattgtgggtctacactttgaaaattgaacccgcactaagtggtggaacatacattaatttcatccaataaatgaataa 11987667  T
Q  434 aaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    |  |   ||||||||||||||||||||||||| ||||||||    
T  11987666 atgttggagagagtgttgaaaagtgagtgttgttagtattc 11987626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 1093118 - 1093211
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||| ||||||||||||||||| |||||||||| ||||  ||||| ||||||||||| | |||||||||||||| |||||||||| |||||    
T  1093118 tcttattagtttaaatcattgtggaactacactttggaaatataactcatacaaagtggtggaacatacattgatttcatctaataaacgagtg 1093211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 333 - 426
Target Start/End: Complemental strand, 39499535 - 39499442
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 426  Q
    ||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||  | |||||| |  ||||||||||||||||||||||||||    
T  39499535 tcactttcttattgaattaaatcattgtggatctacattttgaaaattgaactcacaaaaagtgatatgacatacattgattttatctaataaa 39499442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 293 - 474
Target Start/End: Original strand, 6133628 - 6133804
Alignment:
Q  293 ttagcaacactctcttaattttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaa 392  Q
    ||||||||||||||||    || |||||  ||| ||| |||||||||||||||||||||| ||||||||| | || |||||||||||||||| |  ||||    
T  6133628 ttagcaacactctctt----ttgaacatcctctctaatactcactctcttattggtttaa-tcattgtgggtgtagactttgaaaattgaacccacacaa 6133722  T
Q  393 agtggttggacatacattgattttatctaataaaagagtgtaaatactagagag--tgttgaaaagtgagtgttgctagtattc 474  Q
      |||| ||||||| |||||||| ||| |||||||| |||  | | ||||||||  ||||||||||||||||||||||| ||||    
T  6133723 tatggtgggacatatattgatttcatccaataaaagggtg--agtgctagagagattgttgaaaagtgagtgttgctagcattc 6133804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 331 - 423
Target Start/End: Complemental strand, 8899157 - 8899065
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaat 423  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||| |  |||||| ||| |||||||| || |||| |||||||    
T  8899157 actcactctcttattggtttaaattattgtggacctacactttgaaaattgaacccacacaaaggggtgggacatacctttatttcatctaat 8899065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 22540502 - 22540410
Alignment:
Q  340 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  22540502 cttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 22540410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 334 - 415
Target Start/End: Original strand, 10659808 - 10659889
Alignment:
Q  334 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 415  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||    |||||||||| |||||| |||||||||    
T  10659808 cactctcttattggtttaaatcatcgtgggtctacactttgaaaattgaacctacacaaagtggtcggacatccattgattt 10659889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 331 - 468
Target Start/End: Original strand, 28218085 - 28218222
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| |||||||  ||||||| | ||||| ||||||||||||||||||||  |  ||||||||||  ||||||||||||||| ||| ||||||||||    
T  28218085 actcactatcttattaatttaaattactgtggttctacactttgaaaattgaatccacacaaagtggtgagacatacattgatttcatccaataaaagag 28218184  T
Q  431 tgtaaatact--agagagtgttgaaaagtgagtgttgcta 468  Q
    ||  ||| ||  |||||| |||||||| ||||||||||||    
T  28218185 tg--aatgctaaagagagggttgaaaaatgagtgttgcta 28218222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 330 - 474
Target Start/End: Original strand, 3872670 - 3872813
Alignment:
Q  330 aactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||| |||| |||||||||| ||||||||||| ||||||||||| |||||||||    ||||||||||  |||||| ||||| ||||| ||||| ||||    
T  3872670 aactctctcttttattggtttgaatcattgtgggtctacactttggaaattgaacctacacaaagtggtgtgacatatattga-tttatttaatagaaga 3872768  T
Q  430 gtgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    |||  | | ||  ||||||||||||||||||||||||||||| ||||    
T  3872769 gtg--agtgctagagagagtgttgaaaagtgagtgttgctagcattc 3872813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 15523344 - 15523252
Alignment:
Q  340 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  15523344 cttattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 15523252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 15531338 - 15531246
Alignment:
Q  340 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  15531338 cttattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 15531246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 37552978 - 37553034
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaat 379  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37552978 tctttaatactcactctcttattgatttaaatcattgtggatctacactttgaaaat 37553034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 311 - 474
Target Start/End: Original strand, 8741240 - 8741405
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||| ||||| ||| ||||||||||||||| |||||||||||||||  | || |||||||||||||||| |  ||||| | ||  ||||||||||    
T  8741240 ttttgaacaatttctctaatactcactctcttattagtttaaatcattgtgtgtttatactttgaaaattgaacccacacaaattagtgagacatacatt 8741339  T
Q  411 gattttatctaataaaagagtgtaaatact----agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||||| ||| ||||||| ||||  |  |||    ||||||| ||||||||||||||||||||| ||||    
T  8741340 gatttcatccaataaaaaagtg--accactaaagagagagttttgaaaagtgagtgttgctagcattc 8741405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 343 - 432
Target Start/End: Complemental strand, 49730995 - 49730906
Alignment:
Q  343 attggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||| ||||||||||||||||||||| |  ||||||| ||  |||||| |||  ||| ||||||||||||||||    
T  49730995 attggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtagtgtgacatatattagtttaatctaataaaagagtg 49730906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 311 - 463
Target Start/End: Complemental strand, 51732440 - 51732290
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| ||| |||||| ||| ||||||||| |||||||||||||| ||||||| | || |||||||||||| |||||  | ||||| || | | |||||||    
T  51732440 ttttgaacgttttctctaatactcactcttttattggtttaaattattgtgggtttatactttgaaaattaaactcacataaagtagtggaaaatacatt 51732341  T
Q  411 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgt 463  Q
     |||| ||| ||||||| ||||  |||  ||||||| ||||||||||||||||    
T  51732340 aatttcatcaaataaaaaagtg--aatgttagagagcgttgaaaagtgagtgt 51732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 323 - 429
Target Start/End: Complemental strand, 31866466 - 31866361
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 422  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||  | | ||| | || |||||||||||||||| ||| ||    
T  31866466 tctttaatactcactttcttattagtttaaatcattgtggat-tacactttaaaaattgaaccttcaaaaaatagtgggacatacattgatttcatccaa 31866368  T
Q  423 taaaaga 429  Q
     ||||||    
T  31866367 caaaaga 31866361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 331 - 425
Target Start/End: Complemental strand, 33114114 - 33114020
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataa 425  Q
    ||||||| | |||||||||||||||||| |||||||||||||||||||||||||    | ||| |||| ||||||||| |||||| | |||||||    
T  33114114 actcacttttttattggtttaaatcattctggatctacactttgaaaattgaacctacataaaatggtgggacatacaatgatttaaactaataa 33114020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 16948551 - 16948603
Alignment:
Q  316 aacattttctttaaaactcactctcttattggtttaaatcattgtggatctac 368  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  16948551 aacattttctctaatactcactctcttattgatttaaatcattgtggatctac 16948603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 29673618 - 29673522
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    ||||||| | |||||||||||||| ||||| | ||||||||||||||||||||     ||||| |||| ||||||| |||||||||||| |||||||    
T  29673618 actcacttttttattggtttaaataattgtagttctacactttgaaaattgaaactacacaaaatggtgggacatatattgattttatccaataaaa 29673522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 336 - 432
Target Start/End: Complemental strand, 37525667 - 37525571
Alignment:
Q  336 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||||| |  | ||| |||| | |||||||| | ||||||| ||| ||||||||    
T  37525667 ctctcttattagtttaaatcattgtagatctagactttgaaaattgaacccacataaaatggtggaacatacatgggttttatccaatgaaagagtg 37525571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 333 - 474
Target Start/End: Complemental strand, 931515 - 931374
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||| |||||||||||||||||||||| | || | |||||||||||||| |  | ||| || | |||||||||||| ||  ||  ||||||||||||    
T  931515 tcactcttttattggtttaaatcattgtgggtgtatattttgaaaattgaacccacaaaaaatgatgggacatacattgcttccattcaataaaagagtg 931416  T
Q  433 taaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
       ||   ||| || |||||||||||||||||||||| ||||    
T  931415 agtattagagatagagttgaaaagtgagtgttgctagcattc 931374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 335 - 432
Target Start/End: Complemental strand, 15468359 - 15468262
Alignment:
Q  335 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||| |||||  ||||||| ||||||| |||||||| |||||||||||| |  |||||||  |  |||||||||||||| ||| |||||||||||||    
T  15468359 actcttttattaatttaaattattgtgggtctacactatgaaaattgaacccacacaaagtaatgagacatacattgattctatttaataaaagagtg 15468262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 348 - 429
Target Start/End: Complemental strand, 46335223 - 46335142
Alignment:
Q  348 tttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||||||||| |||| || ||||||||  |||||| |||||||||| ||| ||| |||||||| ||| |||||||||    
T  46335223 tttaaatcattgtgggtctatacattgaaaatataactctgacaaagtggtaggatatagattgatttcatccaataaaaga 46335142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 1286185 - 1286232
Alignment:
Q  66 attatatttcagagataaaaaatgcacaactactaatgtgtttatata 113  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  1286185 attatatttcagagataaataatgtacaaccactaatgtgtttatata 1286232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 339 - 418
Target Start/End: Original strand, 45179291 - 45179370
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttat 418  Q
    |||||||  ||||| | ||||||| | ||||||||||||||||||| || |||||||| | | |||||||||||||||||    
T  45179291 tcttattaatttaagttattgtgggtttacactttgaaaattgaaccctcacaaagtgatggaacatacattgattttat 45179370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 13114706 - 13114808
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||| ||| ||||| |||||||| ||||| |  |||| |||| |||| |||  | || |||||||| ||||||| ||||||||||||||||||||||    
T  13114706 actcactatctcattgggttaaatcaatgtgggttatacattttggaaatggaatccatataaagtggtgggacatatattgattttatctaataaaaga 13114805  T
Q  430 gtg 432  Q
    |||    
T  13114806 gtg 13114808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 41918139 - 41918037
Alignment:
Q  331 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||| ||||||| | |||||| ||| ||| ||||||||||||||| |||  |  | |||||||| |||||||||||||||| | | |||||||||    
T  41918139 actcactcttttattgggtaaaatcaatgtaggacctacactttgaaaatggaatccacataaagtggtgggacatacattgatttcacccaataaaaga 41918040  T
Q  430 gtg 432  Q
    |||    
T  41918039 gtg 41918037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 15928698 - 15928597
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||| |||||||||||||||| |||   ||||||| |||||||| ||||||  ||||| ||||  |||||||||  |||  ||| ||||||||||    
T  15928698 actcactcttttattggtttaaatcactgtaagtctacaccttgaaaatagaactcacacaaaatggtgagacatacatgaattccatcaaataaaagag 15928599  T
Q  431 tg 432  Q
    ||    
T  15928598 tg 15928597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 15906573 - 15906458
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 410  Q
    |||| |||||| ||| ||| ||||| ||  |||||| |||||||||||||  ||||||| |||| |||||||  ||  ||||||| | ||||||||||||    
T  15906573 tttttaacattatctctaatactcattcgtttattgatttaaatcattgtaaatctacattttgtaaattgagttcacacaaagt-gatggacatacatt 15906475  T
Q  411 gattttatctaataaaa 427  Q
    ||||||||  |||||||    
T  15906474 gattttatgcaataaaa 15906458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 29418615 - 29418523
Alignment:
Q  341 ttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||| | |||||| ||| |||||||||||||| |||| ||||||  | ||||||||  || ||||||| |||||||| ||||||||||||    
T  29418615 ttattgggtgaaatcaatgtaggatctacactttggaaatagaactcacataaagtggtgagatatacattaattttatccaataaaagagtg 29418523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 337 - 469
Target Start/End: Complemental strand, 35336997 - 35336871
Alignment:
Q  337 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaa 436  Q
    |||||||||||||||||||||||||  |||||| |  ||||||||||| |  ||||||||||     | |||||||||| ||| ||||||| | ||  |     
T  35336997 tctcttattggtttaaatcattgtgtgtctacattaagaaaattgaacccacacaaagtggt----gagacattgatttcatccaataaaataatg--ag 35336904  T
Q  437 tactagagagtgttgaaaagtgagtgttgctag 469  Q
    | ||||||  |||||||||||||||||||||||    
T  35336903 tgctagaggatgttgaaaagtgagtgttgctag 35336871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 426
Target Start/End: Original strand, 39974237 - 39974326
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 426  Q
    ||||||||||||||||||||||||||||||  |||| |||||      |||||| | |||||| |||| | |||| ||||||||| ||||||||||    
T  39974237 actcactctcttattggtttaaatcattgtaaatctgcactt------ttgaacccatacaaaatggtggaacatccattgatttcatctaataaa 39974326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 12767365 - 12767420
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactc 386  Q
    ||||||||| |||||||||||||||||| ||  |||||||||| ||||| ||||||    
T  12767365 actcactcttttattggtttaaatcattatgagtctacactttaaaaatagaactc 12767420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 382
Target Start/End: Complemental strand, 15906679 - 15906632
Alignment:
Q  335 actctcttattggtttaaatcattgtggatctacactttgaaaattga 382  Q
    |||||||||||  ||||||| ||||| |||||||||||||||||||||    
T  15906679 actctcttattaatttaaattattgtagatctacactttgaaaattga 15906632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 341 - 384
Target Start/End: Complemental strand, 44272051 - 44272008
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    |||||| ||||||||||||| | |||||||||||||||||||||    
T  44272051 ttattgatttaaatcattgttgttctacactttgaaaattgaac 44272008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 50539257 - 50539166
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||| ||||||||||||| |  ||||||||  ||||||||||| |  | |||||||| | |||||| ||||||| ||| ||||||||||||    
T  50539257 ttattagtttaaatcattgcgtgtctacactgagaaaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtg 50539166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 11135883 - 11135781
Alignment:
Q  331 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||| ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | | ||||||| |    
T  11135883 actcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaata 11135784  T
Q  430 gtg 432  Q
    |||    
T  11135783 gtg 11135781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 432
Target Start/End: Complemental strand, 15660976 - 15660935
Alignment:
Q  391 aaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||| |||||| ||||||||||||| ||||||||||||    
T  15660976 aaagtggtgggacatgcattgattttatccaataaaagagtg 15660935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 406
Target Start/End: Complemental strand, 27570366 - 27570293
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacata 406  Q
    ||||| ||||||| ||| |||||||||||| | |||||||| |||||| |||||  ||||| |||| |||||||    
T  27570366 tcactttcttattagttcaaatcattgtgggtttacactttaaaaattaaactcacacaaattggtgggacata 27570293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 33113990 - 33114039
Alignment:
Q  311 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgt 360  Q
    ||||||| | ||||||||| ||||||| ||||||| ||||||||||||||    
T  33113990 ttttaaatactttctttaatactcactttcttattagtttaaatcattgt 33114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 47644334 - 47644387
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    |||| ||||||||||| ||||||||||||||| | ||||| |||||||| ||||    
T  47644334 actcgctctcttattgatttaaatcattgtgggtttacacattgaaaatagaac 47644387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 1e-31; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 331 - 476
Target Start/End: Complemental strand, 46517434 - 46517291
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||||||||| |  ||| | |||| ||| |||||||||||||||| |||||| |||    
T  46517434 actcattctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacagaatggtgggatatacattgattttatccaataaatgag 46517335  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattcat 476  Q
    ||  | | |||||||||||| |||||||||||||||||| ||||||    
T  46517334 tg--agtgctagagagtgttaaaaagtgagtgttgctagcattcat 46517291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 27888425 - 27888337
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatc 419  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||| ||||||||||||||||||||    
T  27888425 actcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattgattttatc 27888337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 334 - 474
Target Start/End: Original strand, 31502504 - 31502644
Alignment:
Q  334 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgt 433  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| |  ||||| |||| |||||||| ||||||| ||| ||||||||||||     
T  31502504 cactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacgcacacaaaatggtgggacataccttgatttcatccaataaaagagtga 31502603  T
Q  434 aaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
       |   ||||| ||||||||||||||||||||||| ||||    
T  31502604 gtgttagagagactgttgaaaagtgagtgttgctagcattc 31502644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 32205219 - 32205079
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||||| |||||||||||||| || ||| ||||| |||||||||| |  ||||| |||| |||||||||||||||| ||| ||||||||||    
T  32205219 actcactctcttattagtttaaatcattgtagacctatactttaaaaattgaacccacacaaaatggtaggacatacattgatttcatccaataaaagag 32205120  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | ||  |||||||||| |||||||||||||||||| ||||    
T  32205119 tg--agta-gagagagtgttcaaaagtgagtgttgctagcattc 32205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 22190082 - 22189939
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||  ||||||||||||||||||| || ||||||||||||||||||||| |  |||||||||| || ||||||||||||| ||| ||||||||||    
T  22190082 actcactcgtttattggtttaaatcattgcgggtctacactttgaaaattgaacccacacaaagtggtgggccatacattgatttcatccaataaaagag 22189983  T
Q  431 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | | ||  ||||||||||||||| |||||||| |||| ||||    
T  22189982 tg--agtgctagagagagtgttgaaaaatgagtgtttctagcattc 22189939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 323 - 464
Target Start/End: Complemental strand, 7459494 - 7459353
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 422  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||| | |||||||||||| |||  | |||||||| | | |||||||||||||||| ||    
T  7459494 tctttaatactcactcttttattggtttaaattattgtggatctatattttgaaaattgagctcacataaagtggtggaatatacattgattttatcgaa 7459395  T
Q  423 taaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 464  Q
    ||||||| ||   ||  |||||| |||| |||||||||||||    
T  7459394 taaaagaatgagtattatagagaatgttaaaaagtgagtgtt 7459353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 293 - 427
Target Start/End: Original strand, 25686838 - 25686968
Alignment:
Q  293 ttagcaacactctcttaattttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaa 392  Q
    ||||||||||||||||    || |||||| | | ||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||||| | || ||    
T  25686838 ttagcaacactctctt----ttgaacattctttctaatactcattatcttattggtttaaatcattgtgggtctacactttgaaaattgaacccataaaa 25686933  T
Q  393 agtggttggacatacattgattttatctaataaaa 427  Q
    ||||||  ||||||||||||||| ||| |||||||    
T  25686934 agtggtatgacatacattgatttcatcaaataaaa 25686968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 326 - 474
Target Start/End: Complemental strand, 33008252 - 33008104
Alignment:
Q  326 ttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataa 425  Q
    |||| |||| |||| |||||||||||||||||||||| ||||||| ||| |||| |||| |  |||||||||| ||||||||| |||||| ||| |||||    
T  33008252 ttaatactctctcttttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacaatgatttcatccaataa 33008153  T
Q  426 aagagtgtaaatactagag--agtgttgaaaagtgagtgttgctagtattc 474  Q
    |||||||  | | ||||||  |||||| |||||||||||||||||| ||||    
T  33008152 aagagtg--agtgctagagatagtgttcaaaagtgagtgttgctagcattc 33008104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 333 - 432
Target Start/End: Complemental strand, 7775140 - 7775042
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||| |||||| |||||||||||| ||| || ||||||||||||||||||||  |||||||||| |||||||||||||||| ||| ||||||||||||    
T  7775140 tcactcacttatttgtttaaatcattctgg-tccacactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatccaataaaagagtg 7775042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 331 - 469
Target Start/End: Original strand, 12263473 - 12263611
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||| |    |||||||| | |||||||||||||||  |||  |||||||||    
T  12263473 actcactatcttattggtttaaatcattgtgggtctacactttgaaaattgatcctacacaaagtgatgggacatacattgattccatccgataaaagag 12263572  T
Q  431 tgta-aatactagagagtgttgaaaagtgagtgttgctag 469  Q
    || |  |||  ||||||||||||||||| |||||||||||    
T  12263573 tggatgata-gagagagtgttgaaaagtaagtgttgctag 12263611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 331 - 465
Target Start/End: Complemental strand, 27949416 - 27949282
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||  ||||| |||| |||||||  ||||||| ||| |||| |||||    
T  27949416 actcactctcttattagtttaaatcattgtgggtctacactttgaaatttgaactcacacaaaatggtaggacataacttgatttcatccaatacaagag 27949317  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttg 465  Q
    ||    |   |||||||||| ||||||||||||||    
T  27949316 tgagtgttagagagagtgttaaaaagtgagtgttg 27949282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 323 - 415
Target Start/End: Complemental strand, 6442316 - 6442224
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 415  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |  ||||| |||| | ||||||||||||||    
T  6442316 tctttaatactcactcttttattggtttaaatcattgtgggtctacactttgaaaattgaatccccacaaaatggtggaacatacattgattt 6442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 14795274 - 14795131
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    | ||| |||| |||||||||||||||| ||| ||||||| ||    
T  14795274 actcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttcatccaataaaaaag 14795175  T
Q  431 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||    |||  ||||||||||||||||||||||||||||| ||||    
T  14795174 tgactgata-gagagagtgttgaaaagtgagtgttgctagcattc 14795131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 15242266 - 15242123
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    | ||| |||| |||||||||||||||| ||| ||||||| ||    
T  15242266 actcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttcatccaataaaaaag 15242167  T
Q  431 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||    |||  ||||||||||||||||||||||||||||| ||||    
T  15242166 tgactgata-gagagagtgttgaaaagtgagtgttgctagcattc 15242123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 331 - 429
Target Start/End: Original strand, 32212907 - 32213004
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| |||||||||| | |||||||| ||  ||||||||||||||| ||| |||||||||    
T  32212907 actcactctcttattggtttaaatcattgtgg-gctacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaaaga 32213004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 11692322 - 11692221
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||| |||| |||||||||| ||||  | |||||||||||||||||||    |||||||||| |||||||||||||||| ||| ||||||||||    
T  11692322 actcactctcatattagtttaaatcactgtgagtttacactttgaaaattgaacctacacaaagtggtaggacatacattgatttcatccaataaaagag 11692223  T
Q  431 tg 432  Q
    ||    
T  11692222 tg 11692221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 11824214 - 11824113
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| |||||||| ||||||||||||||| | ||||||||||||||||||     ||||| |||| |||||||||||||||| ||| ||||||||||    
T  11824214 actcactttcttattgatttaaatcattgtgggtttacactttgaaaattgaagctacacaaaatggtgggacatacattgatttcatccaataaaagag 11824115  T
Q  431 tg 432  Q
    ||    
T  11824114 tg 11824113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 48374476 - 48374617
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||| ||||||||||| ||||||  | ||||||||| |||| |||| | || |||||||| |||||| |||  |||  ||  ||||||||||    
T  48374476 actcactctcttgttggtttaaattattgtgagtatacactttggaaatagaacccatagaaagtggtgggacatgcatgaattccattcaataaaagag 48374575  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | |||||||||||||| |||||||||||||||||| ||||    
T  48374576 tg--agtactagagagtgttcaaaagtgagtgttgctagcattc 48374617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 23564076 - 23564159
Alignment:
Q  335 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttat 418  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||| |||||| |||||||||||  |||||||||| |||||||    
T  23564076 actcttttattggtttaaattacagtggatctacactttgaaaatagaactcatacaaagtggtgcgacatacattaattttat 23564159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 331 - 468
Target Start/End: Original strand, 19422871 - 19423008
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||| |      ||||| | ||| |||||||||||||||| ||| ||| ||||||    
T  19422871 actcactcttttattggtttaaatcattgtggatctacacttcgaaaatagtgacaatacaatggggtgggacatacattgatttcatccaatgaaagag 19422970  T
Q  431 tg-taaatactagagagtgttgaaaagtgagtgttgcta 468  Q
    ||    |||  ||||||||||||||||||||||||||||    
T  19422971 tgagtgata-gagagagtgttgaaaagtgagtgttgcta 19423008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 469
Target Start/End: Complemental strand, 39254234 - 39254088
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 422  Q
    ||||||| |||||||||||||||| ||||||| ||||||| |||||| ||| ||||||||||    ||||||||||   ||||||||| |||||||  ||    
T  39254234 tctttaacactcactctcttattgatttaaattattgtgggtctacattttaaaaattgaaccaacacaaagtggtgaaacatacattaattttattcaa 39254135  T
Q  423 taaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctag 469  Q
    ||||||||||       |||||| ||||||||||||| |||||||||    
T  39254134 taaaagagtgagtgctatagagaatgttgaaaagtgaatgttgctag 39254088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 459
Target Start/End: Original strand, 32178843 - 32178966
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||| ||||||||||||||  | |||||||||||||||||| |   ||| |||||| | ||||||||| |||| ||| ||||||| |  |    
T  32178843 tcactctcttattgatttaaatcattgtgtgtatacactttgaaaattgaa-taaaacagagtggtggaacatacattaatttcatccaataaaata--g 32178939  T
Q  433 taaatactagagagtgttgaaaagtga 459  Q
    ||| | |||||||||||||||||||||    
T  32178940 taagtgctagagagtgttgaaaagtga 32178966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 39364335 - 39364420
Alignment:
Q  4 gggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatg 89  Q
    |||||||||||||| |||| |||| |||||||||||||||||||  || ||||||||| ||  |||||||||| ||||||| ||||    
T  39364335 gggtttatgcggaagcaaggcccctcaagatcaggagctctgatatcatgtgaaaactgaatgttatatttcaaagataaataatg 39364420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 44350839 - 44350940
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||| || ||||||||||||||||||  |||||||||||||||||||||    ||||||||    ||||||||||||||| ||| ||||||| ||    
T  44350839 actcactcttttgttggtttaaatcattgtgagtctacactttgaaaattgaacctaaacaaagtgacgagacatacattgatttgatccaataaaaaag 44350938  T
Q  431 tg 432  Q
    ||    
T  44350939 tg 44350940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 10933996 - 10934100
Alignment:
Q  325 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 424  Q
    ||||| ||||| ||||||||| |||||||||||||||| | || |||||| |||| |||  | |||||||||||  |||||| ||| |||||||| ||||    
T  10933996 tttaatactcaatctcttattagtttaaatcattgtgggtttatactttggaaatagaaaccatacaaagtggtgagacatatattaattttatccaata 10934095  T
Q  425 aaaga 429  Q
    |||||    
T  10934096 aaaga 10934100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 363 - 474
Target Start/End: Complemental strand, 12271096 - 12270988
Alignment:
Q  363 atctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtg 462  Q
    ||||||||||||||||| |||| |  |||||||||| |||||||||||||||| |||| ||||||||||| |     ||||||||||||||||||  |||    
T  12271096 atctacactttgaaaatagaac-cacacaaagtggtgggacatacattgatttcatctgataaaagagtggatgctatagagagtgttgaaaagt--gtg 12271000  T
Q  463 ttgctagtattc 474  Q
    ||||||| ||||    
T  12270999 ttgctagcattc 12270988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 341 - 465
Target Start/End: Original strand, 25092708 - 25092832
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact 440  Q
    |||||||||||||| ||||||  |||| |||| |||||||||||||  ||||||| || |||||||||||||||  ||| ||| ||||||||            
T  25092708 ttattggtttaaattattgtgtgtctatacttagaaaattgaactcacacaaagtagtaggacatacattgattgcatcaaatgaaagagtgggtgcgga 25092807  T
Q  441 agagagtgttgaaaagtgagtgttg 465  Q
    |||||||||||||||||||||||||    
T  25092808 agagagtgttgaaaagtgagtgttg 25092832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 24539159 - 24539261
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||||| ||||| |||||||| ||||| || |||| |||| |||| |||  | || |||||||| ||||||| |||||||||||| |||||||||    
T  24539159 actcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaagtggtgggacatatattgattttatccaataaaaga 24539258  T
Q  430 gtg 432  Q
    |||    
T  24539259 gtg 24539261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 36845567 - 36845612
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  36845567 tcttattggtttaaatcattgtgggtctatactttgaaaattgaac 36845612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 19494385 - 19494477
Alignment:
Q  341 ttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||| | |||||| ||| ||||||||||||||||||| |||| |  | |||||||| |||||||||||||||| | | ||||||||||||    
T  19494385 ttattgggtgaaatcaatgtaggatctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtg 19494477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 465
Target Start/End: Original strand, 44510999 - 44511107
Alignment:
Q  357 ttgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact--agagagtgttgaaa 454  Q
    |||||||||||||| ||||||||||||| |  |||||||| |  ||||||||||||||| ||| ||||||| ||||  | | ||  ||||||||||||||    
T  44510999 ttgtggatctacacattgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtg--agtgctagagagagtgttgaaa 44511096  T
Q  455 agtgagtgttg 465  Q
    ||| |||||||    
T  44511097 agtaagtgttg 44511107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 17749838 - 17749736
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||||| ||||| |||||||| ||||| || |||| |||| ||||  ||  | || |||||||| ||||||| |||||||||||| |||||||||    
T  17749838 actcactctctcattgggttaaatcaatgtgggtcatacattttggaaatgaaatccatataaagtggtgggacatatattgattttatccaataaaaga 17749739  T
Q  430 gtg 432  Q
    |||    
T  17749738 gtg 17749736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 1316431 - 1316374
Alignment:
Q  316 aacattttctttaaaactcactctcttattggtttaaatcattgtggatctacacttt 373  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||  || ||||||||    
T  1316431 aacattttctctaatactcactcttttattggtttaaatcattgtaaatgtacacttt 1316374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 6580039 - 6580092
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    |||||||||||||||||||||||| ||||||| || | | ||||||||||||||    
T  6580039 actcactctcttattggtttaaattattgtgggtccatattttgaaaattgaac 6580092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 373 - 474
Target Start/End: Original strand, 8073367 - 8073468
Alignment:
Q  373 tgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactag--agagtgttgaaaagtgagtgttgctagt 470  Q
    |||||||||||||   |||||||||| |||||||||||||||| |||  |||||||||||  | | ||||  ||| ||||||||| |||||||| |||||    
T  8073367 tgaaaattgaacttacacaaagtggtgggacatacattgatttcatccgataaaagagtg--agtgctaggaagaatgttgaaaaatgagtgttactagt 8073464  T
Q  471 attc 474  Q
    ||||    
T  8073465 attc 8073468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 416
Target Start/End: Complemental strand, 9649059 - 9648982
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatttt 416  Q
    |||||||||||||||||||||||| | ||||| ||| |||  |||| |  |||||||||| | |||||||||||||||    
T  9649059 tcttattggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgatttt 9648982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 333 - 369
Target Start/End: Original strand, 36845530 - 36845566
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctaca 369  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36845530 tcactctcttattggtttaaatcattgtgggtctaca 36845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 12167358 - 12167319
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtgg 362  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  12167358 tctttaatactcactttcttattggtttaaatcattgtgg 12167319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 429
Target Start/End: Original strand, 17354563 - 17354662
Alignment:
Q  331 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||| | ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| ||| |||||||||    
T  17354563 actcacttttttattgggtaaaatcaatgtaggacctacactttggaaatagaacccacataaagtggtgggacatacattgatttcatccaataaaaga 17354662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 1688126 - 1688048
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacat 409  Q
    ||||||||| ||||||| ||||||| |||| | ||||||||||| ||||  ||||| | |||||||||  |||||||||    
T  1688126 actcactcttttattgggttaaatcgttgtaggtctacactttggaaataaaactcatgcaaagtggtgagacatacat 1688048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 25428515 - 25428617
Alignment:
Q  331 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||| ||||||| | |||||| ||| |||||||||||||| ||||  ||| |  | |||||||| |||||||||||||||| |   |||||||||    
T  25428515 actcactcttttattggataaaatcaatgtaggatctacactttggaaatgtaacccacataaagtggtgggacatacattgatttcacacaataaaaga 25428614  T
Q  430 gtg 432  Q
    |||    
T  25428615 gtg 25428617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 31874159 - 31874117
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacacttt 373  Q
    |||||||||||||| ||||||||||||||||  ||||||||||    
T  31874159 actcactctcttataggtttaaatcattgtgagtctacacttt 31874117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 3855851 - 3855900
Alignment:
Q  335 actctcttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    ||||| |||||||||||||||||||| | |||  ||||||||||||||||    
T  3855851 actcttttattggtttaaatcattgtaggtctgaactttgaaaattgaac 3855900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 13919924 - 13919839
Alignment:
Q  331 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 415  Q
    ||||||||  ||||||| | |||||| ||| ||| ||||||||||||||| |||| |  | |||||||| ||||||||||||||||    
T  13919924 actcactcatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacatacattgattt 13919839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 2e-30; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 10142013 - 10142154
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||| ||||||| ||||| | |||||||||||||||| ||||    |||||||||| |||||||||||||||||||| ||||||||||    
T  10142013 actcactctcttattgatttaaataattgttggtctacactttgaaaatggaaccaacacaaagtggtgggacatacattgattttatccaataaaagag 10142112  T
Q  431 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  | | ||| ||||||||||||| ||||||||||||| ||||    
T  10142113 tg--agtgctatagagtgttgaaaaatgagtgttgctagcattc 10142154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 331 - 474
Target Start/End: Original strand, 28490759 - 28490902
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||||||   |||||||||| |||||||| ||||||| ||| ||||||| ||    
T  28490759 actcactctcttattggtttaaattattgtgggtctacactttcaaaattgaacttacacaaagtggtgggacatactttgatttcatccaataaaaaag 28490858  T
Q  431 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 474  Q
    ||  ||| ||  ||||||| ||||||||||| ||||||||| ||||    
T  28490859 tg--aatgctagagagagttttgaaaagtgactgttgctagcattc 28490902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 332 - 425
Target Start/End: Complemental strand, 39246750 - 39246657
Alignment:
Q  332 ctcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataa 425  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||| |||||||  |||||||||| |||||||||||||||||||| |||||    
T  39246750 ctcactctcttattggtttaaagtattgtgggtctacactttgaaaactgaactcacacaaagtggtgggacatacattgattttatccaataa 39246657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 334 - 432
Target Start/End: Complemental strand, 34368500 - 34368402
Alignment:
Q  334 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |  |||||||||| | |||||||||| ||||||| ||| ||||||||    
T  34368500 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtggaacatacattggttttatccaatgaaagagtg 34368402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 5413774 - 5413875
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| | |||||||||||||||||| ||| ||||||||||| ||||||||| |  |||||||||| |||||||||||||||| ||| ||||||||||    
T  5413774 actcacttttttattggtttaaatcattatgggtctacactttgtaaattgaacccacacaaagtggtgggacatacattgatttcatccaataaaagag 5413873  T
Q  431 tg 432  Q
    ||    
T  5413874 tg 5413875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 323 - 432
Target Start/End: Original strand, 25710501 - 25710610
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 422  Q
    ||||||| | ||| |||||||||||||||||| ||||||| |||||||||||||||| |||||| ||| ||||||| |||||||||||||||| |   ||    
T  25710501 tctttaatattcattctcttattggtttaaattattgtgggtctacactttgaaaatagaactcatacgaagtggtaggacatacattgatttcacacaa 25710600  T
Q  423 taaaagagtg 432  Q
    ||||||||||    
T  25710601 taaaagagtg 25710610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 333 - 468
Target Start/End: Original strand, 28090268 - 28090401
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||||||||||  |||||||||| ||||||  |||||||| || ||||| || |  |    
T  28090268 tcactcttttattggtttaaatcattgttgatctaaactttgaaaattgaactcacacaaagtggtgggacatgaattgatttcatataatataata--g 28090365  T
Q  433 taaatactagagagtgttgaaaagtgagtgttgcta 468  Q
    ||| |  |||||||||||||||| | ||||||||||    
T  28090366 taagtgatagagagtgttgaaaaataagtgttgcta 28090401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 333 - 432
Target Start/End: Original strand, 17537141 - 17537240
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||    | ||| |||| |||||||||||||||| ||| ||||||||||||    
T  17537141 tcactctcttattggtttaaatcattatggatctacactttgaaaattaaaccaacaaaaattggtgggacatacattgatttgatcaaataaaagagtg 17537240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 41330438 - 41330531
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    |||||||| | ||||||||||| |||| ||||||||||||||||    
T  41330438 tcttattggtttaaatcattgtgagtctacactttgaaaattgaacctacacaaagtgatgggacatacattaatttcatctaataaaagagtg 41330531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 333 - 432
Target Start/End: Complemental strand, 43405534 - 43405435
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||||||||||| ||||||||||||||| ||||||||||| |||| ||||   |||||||||||  ||||||||||||||| ||  ||||||||||||    
T  43405534 tcactctcttattgatttaaatcattgtgggtctacactttggaaatagaacatatacaaagtggtgagacatacattgatttcattcaataaaagagtg 43405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 334 - 432
Target Start/End: Original strand, 27592492 - 27592590
Alignment:
Q  334 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||| ||||||  | ||||||||  ||||||||||||||| ||| ||||||| ||||    
T  27592492 cactctcttattggtttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtg 27592590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 331 - 433
Target Start/End: Complemental strand, 37455491 - 37455390
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||||||||||||||||||||| | ||||||  ||||||||||||||||||||| |  ||||| |||| | |||||||||||||||||| |||||| |||    
T  37455491 actcactctcttattggtttaatt-attgtgagtctacactttgaaaattgaacccccacaaaatggtggaacatacattgattttatcgaataaatgag 37455393  T
Q  431 tgt 433  Q
    |||    
T  37455392 tgt 37455390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 30325911 - 30326012
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| | || ||||||  | ||||||||  ||||||||||||||| ||| ||||||| ||    
T  30325911 actcactttcttattggtttaaatcattgcggatctacactttggagatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatag 30326010  T
Q  431 tg 432  Q
    ||    
T  30326011 tg 30326012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 339 - 429
Target Start/End: Original strand, 28434863 - 28434951
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    |||||||||||||||||||||||| |||| |||||||||||||||  |  ||| |||||| ||||||| |||||||||||| |||||||||    
T  28434863 tcttattggtttaaatcattgtgggtctaaactttgaaaattgaa--ccaacacagtggtgggacatatattgattttatccaataaaaga 28434951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 41105607 - 41105707
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    |||| ||||||||||||||||||||| ||||| | | ||||||||||||||||| |  ||||||| || |||||| | ||||||| ||| ||||||||||    
T  41105607 actcgctctcttattggtttaaatcactgtgggtatgcactttgaaaattgaacccacacaaagtagtgggacatcccttgatttcatccaataaaagag 41105706  T
Q  431 t 431  Q
    |    
T  41105707 t 41105707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 474
Target Start/End: Original strand, 28611819 - 28611958
Alignment:
Q  335 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgta 434  Q
    ||||| |||||| ||||||||||||||  |||||||||| ||||| |||||| ||||||||| | ||||||||| || || |||| ||| |||||||| |    
T  28611819 actcttttattgatttaaatcattgtgcgtctacactttaaaaatggaactcatacaaagtgatgggacatacactggttatatccaatgaaagagtgaa 28611918  T
Q  435 aatactagagagtgttgaaaagtgagtgttgctagtattc 474  Q
      |   |||||||| | |||||||||||||| ||| ||||    
T  28611919 tgttagagagagtgctcaaaagtgagtgttgttagcattc 28611958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 323 - 429
Target Start/End: Original strand, 34384720 - 34384826
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 422  Q
    ||||||| ||||||||| |||| ||| ||||||||||||  |||| | ||||||||||||||||  ||||| | || |||||||||||||||| | | ||    
T  34384720 tctttaatactcactcttttatcggtctaaatcattgtgagtctataatttgaaaattgaactcacacaaaatagtgggacatacattgatttcacccaa 34384819  T
Q  423 taaaaga 429  Q
    |||||||    
T  34384820 taaaaga 34384826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 339 - 427
Target Start/End: Original strand, 1923597 - 1923685
Alignment:
Q  339 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||||  ||||||||||  ||||||||||  ||  |||||||||||    
T  1923597 tcttattggtttaaatcattgtaaaactacactttaaaaattgaactcacacaaagtggtgtgacatacattctttgcatctaataaaa 1923685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 333 - 469
Target Start/End: Complemental strand, 25630948 - 25630812
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||| ||| ||||||||||||||| |||| |||||||||||||||||||||   |||||| | || ||| ||||||| |||||||  ||||||| |||     
T  25630948 tcactttctaattggtttaaatcatcgtgggtctacactttgaaaattgaacctatacaaaatagtgggatatacattaattttattaaataaaatagta 25630849  T
Q  433 taaatactagagagtgttgaaaagtgagtgttgctag 469  Q
     |  |   ||||||||||||||||| ||| |||||||    
T  25630848 aatgttaaagagagtgttgaaaagtaagtattgctag 25630812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 31885878 - 31885921
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  31885878 ttattggtttaaatcattgtagatctacactttgaaaattgaac 31885921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 10666717 - 10666819
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 422  Q
    ||||||| | |||||||||||||||||||||| | ||||  |||||| ||| ||||| |||| |  | |||||||| ||| ||||| |||||||||||||    
T  10666717 tctttaacattcactctcttattggtttaaattaatgtgagtctacaatttaaaaatggaacccacataaagtggtaggatatacaatgattttatctaa 10666816  T
Q  423 taa 425  Q
    |||    
T  10666817 taa 10666819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 333 - 466
Target Start/End: Original strand, 17434888 - 17435019
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||| |||||||||||||||| ||||| ||||||||||  |||| |||||| |||||| | || | ||||| |||  ||| ||| |||||||| | |    
T  17434888 tcactcttttattggtttaaatcaatgtgggtctacactttagaaatagaactcatacaaaatagtagaacatatatttgtttaatccaataaaagtgag 17434987  T
Q  433 taaatactagagagtgttgaaaagtgagtgttgc 466  Q
    |||  |  ||||||||||||||||| ||||||||    
T  17434988 taataa--agagagtgttgaaaagtaagtgttgc 17435019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 338 - 431
Target Start/End: Original strand, 28155746 - 28155837
Alignment:
Q  338 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 431  Q
    ||||||||||| |||| |||||||  ||||||||||||||||| ||| | || ||| |||||| |||||||||||||| ||  |||||||||||    
T  28155746 ctcttattggtataaaacattgtg--tctacactttgaaaattaaacccataaaaaatggttgaacatacattgatttcattcaataaaagagt 28155837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 42224627 - 42224729
Alignment:
Q  331 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||| ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | |||||||||||    
T  42224627 actcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacctaataaaaga 42224726  T
Q  430 gtg 432  Q
    |||    
T  42224727 gtg 42224729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 1678953 - 1679066
Alignment:
Q  5 ggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagat---aaaaaatgcacaactactaa 101  Q
    |||||||| |||| |||| ||||| |||||||  ||||  ||||||| ||||||||  |  ||||||||||||||||   |||||||| ||||| |||||    
T  1678953 ggtttatgtggaagcaaggccccctaagatcaaaagcttcgatgccatgtgaaaacatactattatatttcagagataaaaaaaaatgtacaaccactaa 1679052  T
Q  102 tgtgtttatatata 115  Q
    | ||||||||||||    
T  1679053 tatgtttatatata 1679066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 28223813 - 28223864
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattga 382  Q
    ||||||||| |||||||||||||||||| ||| |||| ||||||||||||||    
T  28223813 actcactcttttattggtttaaatcattatgggtctatactttgaaaattga 28223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 36337937 - 36337980
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  36337937 ttattggtttaaatcattgtgggtctacactttggaaattgaac 36337980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 337 - 415
Target Start/End: Complemental strand, 10950223 - 10950145
Alignment:
Q  337 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 415  Q
    ||||||||| |||||||||||| ||  |||| ||||||||||| |||  | |||||| |||| ||||||||||||||||    
T  10950223 tctcttattagtttaaatcattatgagtctatactttgaaaatagaatccatacaaaatggtgggacatacattgattt 10950145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 341 - 415
Target Start/End: Complemental strand, 25919344 - 25919270
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 415  Q
    |||||||||||||||||||||  ||||||||||||||||||| | |  ||||| ||||  |||||| ||||||||    
T  25919344 ttattggtttaaatcattgtgagtctacactttgaaaattgatcccacacaaaatggtgagacatatattgattt 25919270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 14553655 - 14553602
Alignment:
Q  331 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 384  Q
    |||||||||||| ||||||||| | ||||||| |||||||||| ||||||||||    
T  14553655 actcactctcttgttggtttaatttattgtgggtctacactttaaaaattgaac 14553602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 43541956 - 43541895
Alignment:
Q  369 actttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 430  Q
    ||||||||||||||||||  |||||||| |  ||||||||||||||||||  ||||||||||    
T  43541956 actttgaaaattgaactcacacaaagtgatgagacatacattgattttattcaataaaagag 43541895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 430
Target Start/End: Complemental strand, 24915199 - 24915099
Alignment:
Q  331 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 429  Q
    ||||||||| ||||||| | |||||| ||| |||  |||||||||||||| |||| |  | |||||||| ||||||| |||||||| | |||||||||||    
T  24915199 actcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacccacataaagtggtgggacatatattgatttcacctaataaaaga 24915100  T
Q  430 g 430  Q
    |    
T  24915099 g 24915099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 333 - 427
Target Start/End: Complemental strand, 2525715 - 2525621
Alignment:
Q  333 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 427  Q
    |||||||||||||  ||||||||||| || || |||||||||||||  ||| ||  ||||||||||   | |||||||||||| ||| |||||||    
T  2525715 tcactctcttattaatttaaatcattatgtatttacactttgaaaacagaaatcacacaaagtggtgatagatacattgatttcatccaataaaa 2525621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 4427375 - 4427321
Alignment:
Q  341 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagt 395  Q
    ||||| |||||||||||||||  ||||||||||||||||| || || ||||||||    
T  4427375 ttatttgtttaaatcattgtgagtctacactttgaaaattaaattcatacaaagt 4427321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 27963 - 27858
Alignment:
Q  323 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 422  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |  |||||||||| |||||||||||||||  ||| ||    
T  27963 tctttaatactcactctcttattggtttaaatcattgtgggtctacactttggaaatagaacccacacaaagtggtgggacatacattgattccatccaa 27864  T
Q  423 taaaag 428  Q
    ||||||    
T  27863 taaaag 27858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 334 - 432
Target Start/End: Original strand, 26902 - 27000
Alignment:
Q  334 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    |||||| ||||||||||||| |||| ||| ||||| ||||||||||||||| |  |||||||||| | ||||||||||||||  || ||||| ||||||    
T  26902 cactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtg 27000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 337 - 432
Target Start/End: Complemental strand, 9801 - 9706
Alignment:
Q  337 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||||| |||||||| ||||||  |||||||||| |||||||||| |  ||||| |||| ||| |||||||||||| ||| ||||||| ||||    
T  9801 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtg 9706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 337 - 432
Target Start/End: Complemental strand, 11347 - 11252
Alignment:
Q  337 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 432  Q
    ||||||||| |||||||| ||||||  |||||||||| |||||||||| |  ||||| |||| ||| |||||||||||| ||| ||||||| ||||    
T  11347 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtg 11252  T

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Target: scaffold0245 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 12452 - 12499
Alignment:
Q  66 attatatttcagagataaaaaatgcacaactactaatgtgtttatata 113  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  12452 attatatttcagagataaataatgtacaaccactaatgtgtttatata 12499  T

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Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 18995 - 18936
Alignment:
Q  54 tgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 113  Q
    ||||||||||| ||||||||| ||||||||| |||| ||||| | |||||||||||||||    
T  18995 tgaaaactaaatattatattttagagataaataatgtacaaccattaatgtgtttatata 18936  T

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