View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19513_high_14 (Length: 251)

Name: NF19513_high_14
Description: NF19513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19513_high_14
NF19513_high_14
[»] chr8 (11 HSPs)
chr8 (1-226)||(17839986-17840208)
chr8 (39-226)||(22698681-22698867)
chr8 (121-226)||(27818270-27818375)
chr8 (100-226)||(15911771-15911898)
chr8 (100-226)||(17637820-17637946)
chr8 (86-187)||(18846794-18846895)
chr8 (144-226)||(18735473-18735555)
chr8 (139-194)||(16778028-16778083)
chr8 (144-194)||(15337415-15337465)
chr8 (144-194)||(15426480-15426530)
chr8 (144-194)||(15517784-15517834)
[»] scaffold0171 (1 HSPs)
scaffold0171 (106-226)||(26879-26998)
[»] chr2 (20 HSPs)
chr2 (106-226)||(25966138-25966258)
chr2 (71-226)||(30089868-30090024)
chr2 (71-226)||(30126473-30126629)
chr2 (71-226)||(10480351-10480507)
chr2 (71-226)||(30051853-30052009)
chr2 (71-226)||(30142897-30143053)
chr2 (100-226)||(23769334-23769461)
chr2 (139-226)||(21256426-21256513)
chr2 (72-226)||(20281100-20281254)
chr2 (73-226)||(20442245-20442398)
chr2 (100-226)||(21904923-21905050)
chr2 (71-194)||(25349258-25349382)
chr2 (73-171)||(23995667-23995765)
chr2 (121-226)||(22593821-22593926)
chr2 (106-226)||(30244067-30244188)
chr2 (145-226)||(34827576-34827657)
chr2 (121-222)||(23814947-23815048)
chr2 (121-216)||(23829801-23829896)
chr2 (144-222)||(28567675-28567753)
chr2 (121-194)||(37130482-37130555)
[»] chr7 (10 HSPs)
chr7 (71-226)||(10478141-10478296)
chr7 (72-226)||(18450811-18450965)
chr7 (71-226)||(16713224-16713378)
chr7 (71-226)||(17687460-17687614)
chr7 (72-226)||(40342803-40342958)
chr7 (71-226)||(41239174-41239329)
chr7 (121-226)||(10827746-10827851)
chr7 (121-226)||(11021538-11021643)
chr7 (144-226)||(18752752-18752834)
chr7 (121-194)||(10864192-10864265)
[»] scaffold0058 (1 HSPs)
scaffold0058 (100-226)||(14978-15104)
[»] chr5 (8 HSPs)
chr5 (72-226)||(19212406-19212560)
chr5 (91-213)||(19859542-19859664)
chr5 (121-226)||(20024402-20024507)
chr5 (72-226)||(18156174-18156329)
chr5 (144-221)||(40932982-40933059)
chr5 (145-224)||(17432608-17432686)
chr5 (121-191)||(16832189-16832259)
chr5 (121-195)||(26836235-26836309)
[»] chr3 (8 HSPs)
chr3 (106-226)||(14345524-14345644)
chr3 (71-226)||(55002313-55002469)
chr3 (121-226)||(132401-132506)
chr3 (100-213)||(13101884-13101997)
chr3 (121-231)||(14000792-14000902)
chr3 (121-231)||(1934593-1934702)
chr3 (106-230)||(14133367-14133490)
chr3 (72-218)||(43135540-43135687)
[»] chr1 (10 HSPs)
chr1 (100-226)||(18530604-18530730)
chr1 (74-226)||(21550555-21550707)
chr1 (100-226)||(16406725-16406852)
chr1 (121-226)||(21168294-21168399)
chr1 (144-231)||(27902122-27902209)
chr1 (144-226)||(2603433-2603515)
chr1 (121-224)||(27131786-27131889)
chr1 (121-191)||(4361626-4361696)
chr1 (121-207)||(21382013-21382099)
chr1 (144-189)||(21076663-21076708)
[»] scaffold0297 (1 HSPs)
scaffold0297 (71-226)||(8731-8887)
[»] scaffold0035 (1 HSPs)
scaffold0035 (71-197)||(25732-25858)
[»] chr4 (7 HSPs)
chr4 (121-226)||(49526414-49526519)
chr4 (144-222)||(10267324-10267402)
chr4 (109-226)||(50687603-50687721)
chr4 (145-226)||(3077895-3077976)
chr4 (121-222)||(18566961-18567062)
chr4 (144-226)||(27812266-27812347)
chr4 (121-194)||(1658665-1658738)
[»] scaffold0100 (1 HSPs)
scaffold0100 (144-226)||(9083-9165)
[»] scaffold0168 (1 HSPs)
scaffold0168 (121-226)||(1355-1460)
[»] scaffold1496 (1 HSPs)
scaffold1496 (71-226)||(1426-1580)
[»] chr6 (9 HSPs)
chr6 (76-226)||(16597197-16597348)
chr6 (72-226)||(26460537-26460692)
chr6 (146-226)||(19272263-19272343)
chr6 (121-207)||(18258075-18258161)
chr6 (164-226)||(19084721-19084783)
chr6 (1-121)||(20440693-20440811)
chr6 (1-121)||(20438070-20438188)
chr6 (144-222)||(11794204-11794282)
chr6 (72-121)||(20450757-20450806)
[»] scaffold0504 (1 HSPs)
scaffold0504 (139-226)||(573-660)
[»] scaffold0239 (2 HSPs)
scaffold0239 (71-171)||(5571-5671)
scaffold0239 (91-171)||(1-81)
[»] scaffold0770 (1 HSPs)
scaffold0770 (121-195)||(3682-3756)
[»] scaffold0126 (1 HSPs)
scaffold0126 (85-195)||(31205-31315)
[»] scaffold0077 (1 HSPs)
scaffold0077 (144-226)||(12424-12506)
[»] scaffold0063 (1 HSPs)
scaffold0063 (74-207)||(70667-70801)
[»] scaffold0029 (1 HSPs)
scaffold0029 (121-195)||(101986-102060)
[»] scaffold0012 (1 HSPs)
scaffold0012 (124-226)||(250032-250134)
[»] scaffold0417 (1 HSPs)
scaffold0417 (121-226)||(1376-1480)
[»] scaffold0151 (1 HSPs)
scaffold0151 (121-222)||(14099-14200)
[»] scaffold0093 (1 HSPs)
scaffold0093 (121-195)||(43652-43726)
[»] scaffold0190 (1 HSPs)
scaffold0190 (121-194)||(7499-7572)


Alignment Details
Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 17840208 - 17839986
Alignment:
Q  1 ttatagtttcaaatgtctatgtgcaggtagnnnnnnnnagtataaataaaagtttctcataggnnnnnnngggtcacaatacattcatatagaatactca 100  Q
    ||||||||||||||||||||||||||||||        ||||||||||| | ||| ||||| |       |||||||||||||||||||||||| | |||    
T  17840208 ttatagtttcaaatgtctatgtgcaggtag--ttttttagtataaataacaatttttcata-gaaaaaaagggtcacaatacattcatatagaaaattca 17840112  T
Q  101 cacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtctt 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  17840111 cacttaaactatccacatctagagagaaacgagttatcagtcacaatgtatgaatctatgtcccaatttactttcaatcaatgcaatttaagtttgtctt 17840012  T
Q  201 cttaaattcctttgcaatttacttgt 226  Q
    ||||||||||||||||||||||||||    
T  17840011 cttaaattcctttgcaatttacttgt 17839986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 22698867 - 22698681
Alignment:
Q  39 agtataaataaaagtttctcataggnnnnnnngggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatc 138  Q
    ||||||||||| |||||||||||||       |||||||||| ||  |||| |||| ||| ||||| ||| ||||||||| |||||||||| ||||||      
T  22698867 agtataaataacagtttctcataggaaaaaa-gggtcacaattcaaccatacagaaaacttacactcaaattatccgcatgtagagagaaatgagttaca 22698769  T
Q  139 agtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    | ||| ||||||||||||||  |  |||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  22698768 aatcaaaatgtatgaatatgcataccaatttactttcaatcaatgcaatttaagtttgtttccttaaattccttttcaatttacttgt 22698681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 27818270 - 27818375
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||||||||| ||||||  |||||||| ||||||||||||||||||||||||| |||||||||  |||||||||||    
T  27818270 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgttttcttaaatgtctttgcaattt 27818369  T
Q  221 acttgt 226  Q
    ||||||    
T  27818370 acttgt 27818375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 15911771 - 15911898
Alignment:
Q  100 acacttaaactatccgcat-ctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtc 198  Q
    ||||| ||||||||||||| | |||||||||||||| |  ||| |||||||||||| ||||||  |||||||| |||||||||||||||||||||||||     
T  15911771 acactcaaactatccgcattcaagagagaaacgagtcacaagttacaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgtt 15911870  T
Q  199 ttcttaaattcctttgcaatttacttgt 226  Q
     |||||| |  |||| ||||||||||||    
T  15911871 ctcttaattgtctttacaatttacttgt 15911898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 17637946 - 17637820
Alignment:
Q  100 acacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtct 199  Q
    ||||| |||||||||||||  |||||||||||||| |  |||||||||||||||||  ||||  |||||||| |||||||||||||||||| |||||| |    
T  17637946 acactcaaactatccgcattcagagagaaacgagtaacaagtcacaatgtatgaatccgtgtaccaatttacattcaatcaatgcaatttacgtttgttt 17637847  T
Q  200 tcttaaattcctttgcaatttacttgt 226  Q
      ||||||| | || ||||||||||||    
T  17637846 atttaaatttcatttcaatttacttgt 17637820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 18846794 - 18846895
Alignment:
Q  86 catatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgca 185  Q
    |||| |||| ||| |||||||||||||||| |||||||||||||||||| |  ||||| ||||||||||| |||||   ||||||| |||||||||||||    
T  18846794 catacagaaaacttacacttaaactatccgtatctagagagaaacgagtaacaagtcagaatgtatgaatctgtgtacaaatttacattcaatcaatgca 18846893  T
Q  186 at 187  Q
    ||    
T  18846894 at 18846895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 18735473 - 18735555
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    |||||||||||||| |||  |||| ||| ||||||||||||||||||||||  | |||||||||  |||||||||||||||||    
T  18735473 caatgtatgaatatctgtaccaatctacattcaatcaatgcaatttaagttcattttcttaaatgtctttgcaatttacttgt 18735555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 16778028 - 16778083
Alignment:
Q  139 agtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtt 194  Q
    ||||||||||||||||| |||||  |||||||| ||||||  ||||||||||||||    
T  16778028 agtcacaatgtatgaatttgtgtaccaatttacattcaatttatgcaatttaagtt 16778083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 15337415 - 15337465
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtt 194  Q
    ||||||||||| ||||||  |||||||| |||||||||| |||||||||||    
T  15337415 caatgtatgaacatgtgtaccaatttacattcaatcaatacaatttaagtt 15337465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 15426480 - 15426530
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtt 194  Q
    ||||||||||| ||||||  |||||||| |||||||||| |||||||||||    
T  15426480 caatgtatgaacatgtgtaccaatttacattcaatcaatacaatttaagtt 15426530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 15517784 - 15517834
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtt 194  Q
    ||||||||||| ||||||  |||||||| |||||||||| |||||||||||    
T  15517784 caatgtatgaacatgtgtaccaatttacattcaatcaatacaatttaagtt 15517834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 26998 - 26879
Alignment:
Q  106 aaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaa 205  Q
    |||||||| |||| |||||||||||||||||  ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  26998 aaactatctgcatttagagagaaacgagttacaagtcacactgtatgaatatgtgtaccaatttactttcaatcaatgcaatttaagtttgttttcttaa 26899  T
Q  206 attcctttgcaatttacttgt 226  Q
    ||| ||| |||||||||||||    
T  26898 att-cttcgcaatttacttgt 26879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 25966258 - 25966138
Alignment:
Q  106 aaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaa 205  Q
    ||||||||| ||| |||||||||||||||||  |||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  25966258 aaactatccacatttagagagaaacgagttaaaagtcacaatgtatgaatccgtgtatcaatttactttcaatcaacgcaatttaagtttgttttcttaa 25966159  T
Q  206 attcctttgcaatttacttgt 226  Q
    |  ||||||||||||||||||    
T  25966158 agccctttgcaatttacttgt 25966138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 30090024 - 30089868
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtat-gaatatgtgtctcaattt 169  Q
    |||||||||| || ||||| |||| ||| ||||| |||||||||||||  ||||||||| |||| |  ||||||||||||| ||||||||||  ||||||    
T  30090024 gggtcacaattcaatcatacagaaaacttacactcaaactatccgcattcagagagaaatgagtaacaagtcacaatgtattgaatatgtgtaccaattt 30089925  T
Q  170 actttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    || |||| || |||||||||| |||| | |  |||||||||||||||||||||||||    
T  30089924 acattcagtctatgcaatttacgtttatttctttaaattcctttgcaatttacttgt 30089868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 30126629 - 30126473
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtat-gaatatgtgtctcaattt 169  Q
    |||||||||| || ||||| |||| ||| ||||| |||||||||||||  ||||||||| |||| |  ||||||||||||| ||||||||||  ||||||    
T  30126629 gggtcacaattcaatcatacagaaaacttacactcaaactatccgcattcagagagaaatgagtaacaagtcacaatgtattgaatatgtgtaccaattt 30126530  T
Q  170 actttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    || |||| || |||||||||| |||| | |  |||||||||||||||||||||||||    
T  30126529 acattcagtctatgcaatttacgtttatttctttaaattcctttgcaatttacttgt 30126473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 10480507 - 10480351
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcat-ctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattt 169  Q
    |||||||||| || ||||| | || ||| |||||  |||||||||||| | |||||||||| |||    |||  ||||||||||| ||||||  ||||||    
T  10480507 gggtcacaatccaatcatacacaaaacttacactcgaactatccgcattcaagagagaaacaagtcgcaagttgcaatgtatgaacatgtgtaccaattt 10480408  T
Q  170 actttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    || ||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  10480407 acattcaatcaatgcaatttaagtttgttttcttaaatgtctttgcaatttacttgt 10480351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 30052009 - 30051853
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgta-tgaatatgtgtctcaattt 169  Q
    |||||||||| || ||||| |||| ||| ||||| |||||||||||||  |||||||||||||| |  |||||||||||| ||||| |||||  ||||||    
T  30052009 gggtcacaattcaatcatacagaaaacttacactcaaactatccgcattcagagagaaacgagtaacaagtcacaatgtattgaatctgtgtaccaattt 30051910  T
Q  170 actttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    || |||| || ||||||||||  ||| | |  |||||||||||||||||||||||||    
T  30051909 acattcagtctatgcaatttacttttatttctttaaattcctttgcaatttacttgt 30051853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 30143053 - 30142897
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgta-tgaatatgtgtctcaattt 169  Q
    |||||||||| || ||||| |||| ||| ||||| |||||||||||||  |||||||||||||| |  |||||||||||| ||||| |||||  ||||||    
T  30143053 gggtcacaattcaatcatacagaaaacttacactcaaactatccgcattcagagagaaacgagtaacaagtcacaatgtattgaatctgtgtaccaattt 30142954  T
Q  170 actttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    || |||| || ||||||||||  ||| | |  |||||||||||||||||||||||||    
T  30142953 acattcagtctatgcaatttacttttatttctttaaattcctttgcaatttacttgt 30142897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 23769461 - 23769334
Alignment:
Q  100 acacttaaactatccgcat-ctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtc 198  Q
    ||||| ||| ||||||||| | |||||||||||||| |  ||| |||||||||||| ||||||  |||||||| |||||||||||||||||||||||||     
T  23769461 acactcaaattatccgcattcaagagagaaacgagtcacaagttacaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgtt 23769362  T
Q  199 ttcttaaattcctttgcaatttacttgt 226  Q
     |||||| |  |||||||||||||||||    
T  23769361 ctcttaattgtctttgcaatttacttgt 23769334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 21256513 - 21256426
Alignment:
Q  139 agtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    |||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||| | |||||||||  |||| ||||||||||||    
T  21256513 agtcacaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttattttcttaaatgtctttacaatttacttgt 21256426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 20281254 - 20281100
Alignment:
Q  72 ggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttac 171  Q
    ||||||||| || ||||| |||| | | ||||| | |||||||||||  |||||||||||||| |  ||||| ||||||||| | |||||  ||||||||    
T  20281254 ggtcacaattcagtcatacagaaaatttacactcatactatccgcattcagagagaaacgagtaacaagtcagaatgtatgattctgtgtaccaatttac 20281155  T
Q  172 tttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
     ||| ||| |||||||||| |||| | || ||||||||| |||||||||||||||    
T  20281154 attcgatctatgcaatttacgtttatttttttaaattccattgcaatttacttgt 20281100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 226
Target Start/End: Original strand, 20442245 - 20442398
Alignment:
Q  73 gtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttact 172  Q
    |||||||| || ||||| |||| ||| ||| | |||||||||||||  ||||| |||||||| |  ||||||||||||||||| | |||  ||||||||     
T  20442245 gtcacaattcaatcatacagaaaacttacaatcaaactatccgcattcagagataaacgagtaacaagtcacaatgtatgaatctctgtaccaatttaca 20442344  T
Q  173 ttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    ||| |||||||||||||| |||| | |  |||| |||| |||||||||||||||    
T  20442345 ttcgatcaatgcaatttacgtttatttctttaatttccattgcaatttacttgt 20442398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 21905050 - 21904923
Alignment:
Q  100 acacttaaactatccgcat-ctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtc 198  Q
    ||||| ||||||||| ||| | |||||| ||||||| |  ||| |||||||||||| ||||||  |||||||| |||||||||||||||||||||||||     
T  21905050 acactcaaactatccacattcaagagaggaacgagtcacaagttacaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgtt 21904951  T
Q  199 ttcttaaattcctttgcaatttacttgt 226  Q
     |||||| |  ||||||||||| |||||    
T  21904950 ctcttaattgtctttgcaattttcttgt 21904923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 25349382 - 25349258
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcat-ctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattt 169  Q
    ||||||||||  | ||||| | || ||| ||||| ||||||||||||| | |||||| ||||||| || |||  ||||||||| ||||||||  ||||||    
T  25349382 gggtcacaatcaaatcatacacaaaacttacactcaaactatccgcattcaagagaggaacgagtcataagttgcaatgtatggatatgtgtaccaattt 25349283  T
Q  170 actttcaatcaatgcaatttaagtt 194  Q
    || ||||||||||||||||||||||    
T  25349282 acattcaatcaatgcaatttaagtt 25349258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 23995765 - 23995667
Alignment:
Q  73 gtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttac 171  Q
    |||||||| || ||||| |||| ||| ||||| |||||||| |||| ||||||||||||||| |  ||||||||||||||||| |||||  ||||||||    
T  23995765 gtcacaattcaatcatacagaaaacttacactcaaactatctgcatttagagagaaacgagtaacaagtcacaatgtatgaatctgtgtaccaatttac 23995667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 22593821 - 22593926
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||||||||| ||||||  |||||||  ||||||||||||||||||||||  | |||||||||  |||| ||||||    
T  22593821 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttatattcaatcaatgcaatttaagttcattttcttaaatgtctttacaattt 22593920  T
Q  221 acttgt 226  Q
    ||||||    
T  22593921 acttgt 22593926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 30244188 - 30244067
Alignment:
Q  106 aaactatccgcatctagagagaaacgagttatcagtcacaatgtat-gaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttctta 204  Q
    |||||||||||||  | | |||||||||| |  ||||||||||||| |||| |||||  |||||||| |||| || |||||||||| |||| | |  |||    
T  30244188 aaactatccgcattcaaaaagaaacgagtaacaagtcacaatgtattgaatttgtgtaccaatttacattcagtctatgcaatttacgtttatttcttta 30244089  T
Q  205 aattcctttgcaatttacttgt 226  Q
    ||||||||||||||||||||||    
T  30244088 aattcctttgcaatttacttgt 30244067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 34827657 - 34827576
Alignment:
Q  145 aatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    |||||||||| ||||||  |||||||| ||||||||||||||||||||||  | |||||||||  |||| || |||||||||    
T  34827657 aatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagttcattttcttaaatgtctttacagtttacttgt 34827576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 23815048 - 23814947
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||||||||| ||||||  |||||||| |||||||||| || ||||||||  | |||||||||  ||||||| |||    
T  23815048 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatacactttaagttcattttcttaaatgtctttgcagttt 23814949  T
Q  221 ac 222  Q
    ||    
T  23814948 ac 23814947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 23829896 - 23829801
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgca 216  Q
    |||||||||||||| |  |||  ||||||||||| ||||||  |||||||| |||||||||| || ||||||||  | |||||||||  |||||||    
T  23829896 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatacactttaagttcattttcttaaatgtctttgca 23829801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 28567753 - 28567675
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttac 222  Q
    ||||||||||| ||||||  |||||||| ||||||||||  ||||||||||  | | |||||||  |||||||||||||    
T  28567753 caatgtatgaacatgtgtaccaatttacattcaatcaatataatttaagttcatttccttaaatgtctttgcaatttac 28567675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 37130482 - 37130555
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtt 194  Q
    |||||||||||||| |  |||  ||||||||||| ||||||  |||||||| |||||||| | |||||||||||    
T  37130482 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcagtacaatttaagtt 37130555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 10478296 - 10478141
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    |||||||||| ||  |||| |||| ||| ||||| ||||||||| ||| |||||||||||||||||  ||||| ||||||||||| |||||  |||||||    
T  10478296 gggtcacaattcaaccatacagaaaacttacactcaaactatccacatttagagagaaacgagttacaagtcaaaatgtatgaatctgtgtaccaattta 10478197  T
Q  171 ctttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    | |||||| | |||||||||||||||| ||||||||||| ||||||||||||||||    
T  10478196 cattcaattagtgcaatttaagtttgttttcttaaattcttttgcaatttacttgt 10478141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 18450811 - 18450965
Alignment:
Q  72 ggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttac 171  Q
    ||||||||| ||  |||| |||| ||| ||||||||||||| ||||| ||||||||||||||| |  ||||| ||||||||||| |||||  |||| |||    
T  18450811 ggtcacaattcaaccatacagaaaacttacacttaaactattcgcatttagagagaaacgagtaacaagtcataatgtatgaatttgtgtaccaatgtac 18450910  T
Q  172 tttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
     |||||||||||||||||| |||| | |  ||||||||| ||| |||||||||||    
T  18450911 attcaatcaatgcaatttatgtttatttctttaaattccattgtaatttacttgt 18450965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 16713378 - 16713224
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    |||||||||| || ||||| |||| ||  ||||| |||||||| ||||  |||||||||||||| || |||||| ||||||||||||||||  |||||||    
T  16713378 gggtcacaattcaatcatacagaaaacgtacactcaaactatctgcattcagagagaaacgagtaataagtcacgatgtatgaatatgtgtaccaattta 16713279  T
Q  171 ctttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    | ||||||  ||||||||||||||| |    ||||||||| |||||||||||||||    
T  16713278 cattcaatttatgcaatttaagtttattcctttaaattcc-ttgcaatttacttgt 16713224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 17687614 - 17687460
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    |||||||||| || ||||| |||| ||  ||||| |||||||| ||||  |||||||||||||| || |||||| ||||||||||||||||  |||||||    
T  17687614 gggtcacaattcaatcatacagaaaacgtacactcaaactatctgcattcagagagaaacgagtaataagtcacgatgtatgaatatgtgtaccaattta 17687515  T
Q  171 ctttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    | ||||||  ||||||||||||||| |    ||||||||| |||||||||||||||    
T  17687514 cattcaatttatgcaatttaagtttattcctttaaattcc-ttgcaatttacttgt 17687460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 40342958 - 40342803
Alignment:
Q  72 ggtcacaatacattcatatagaatactcacacttaaactatccgcatcta-gagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    ||||||||| || ||||| | || ||| ||||| ||| |||||||||  | ||||||||||||| |  |||  ||||||||||| ||||||  |||||||    
T  40342958 ggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaattta 40342859  T
Q  171 ctttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    | || |||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  40342858 catttaatcaatgcaatttaagtttgttttcttaaatgtctttgcaatttacttgt 40342803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 41239329 - 41239174
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    |||||||||| || ||||| | || ||| || || |||||||||| ||  |||||||||||||| |  ||||||||||||||||| |||||  |||||||    
T  41239329 gggtcacaattcaatcatacataaaacttacgctcaaactatccggattcagagagaaacgagtaacaagtcacaatgtatgaatctgtgtaccaattta 41239230  T
Q  171 ctttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    | || ||||||||||||||| |||| | |  ||||||| | |||||||||||||||    
T  41239229 catttaatcaatgcaatttacgtttatttctttaaatttcattgcaatttacttgt 41239174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 10827851 - 10827746
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  |||||||||||| |||||  ||||| || ||||||||||||||||||||||  | ||| |||||  |||| ||||||    
T  10827851 agagagaaacgagtcacaagttgcaatgtatgaatctgtgtaccaattcacattcaatcaatgcaatttaagttcattttcctaaatgtctttacaattt 10827752  T
Q  221 acttgt 226  Q
    ||||||    
T  10827751 acttgt 10827746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 11021643 - 11021538
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  |||||||||||| |||||  ||||| || ||||||||||||||||||||||  | ||| |||||  |||| ||||||    
T  11021643 agagagaaacgagtcacaagttgcaatgtatgaatctgtgtaccaattcacattcaatcaatgcaatttaagttcattttcctaaatgtctttacaattt 11021544  T
Q  221 acttgt 226  Q
    ||||||    
T  11021543 acttgt 11021538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 18752752 - 18752834
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    |||||||||||| |||||  ||| |||| ||||||||||||||||||||||  | |  ||||||  |||||||||||||||||    
T  18752752 caatgtatgaatctgtgtaccaacttacattcaatcaatgcaatttaagttcatttctttaaatgtctttgcaatttacttgt 18752834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 10864192 - 10864265
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtt 194  Q
    |||||||||||||| |  |||  |||||||||||| |||||  ||||| || ||||||||||||||||||||||    
T  10864192 agagagaaacgagtcacaagttgcaatgtatgaatctgtgtaccaattcacattcaatcaatgcaatttaagtt 10864265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 15104 - 14978
Alignment:
Q  100 acacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtct 199  Q
    ||||| |||||||||||||||||||| ||||||||||  ||||| ||||||||||| |||||  | |||||| ||||||||||||||||| ||||||| |    
T  15104 acactaaaactatccgcatctagagataaacgagttacaagtcaaaatgtatgaatttgtgtaccgatttacattcaatcaatgcaatttcagtttgttt 15005  T
Q  200 tcttaaattcctttgcaatttacttgt 226  Q
    |||||||||||||||||||||| ||||    
T  15004 tcttaaattcctttgcaatttatttgt 14978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 19212406 - 19212560
Alignment:
Q  72 ggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttac 171  Q
    ||||||||| || ||||||| || ||| ||||| ||||||||||||| |||||| ||||||||||    ||| |||||| |||| |||||  ||||||||    
T  19212406 ggtcacaattcaatcatataaaaaacttacactcaaactatccgcatttagagataaacgagttacacatcaaaatgtacgaatctgtgtaccaatttac 19212505  T
Q  172 tttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
     ||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  19212506 attcaatcaatgcaatttaagtttgtttctttaaattcctttgcaatttacttgt 19212560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 19859664 - 19859542
Alignment:
Q  91 agaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaattta 190  Q
    |||| ||| ||||| ||||||||  |||||| ||||||||||||||  |||| |||||||||||| |||||  |||||||| ||||||||||||||||||    
T  19859664 agaaaacttacactcaaactatcaacatctaaagagaaacgagttacaagtcccaatgtatgaatttgtgtaccaatttacattcaatcaatgcaattta 19859565  T
Q  191 agtttgtcttcttaaattccttt 213  Q
    ||||||| |||||||||||||||    
T  19859564 agtttgttttcttaaattccttt 19859542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 20024507 - 20024402
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||||||||||||||||  |||| ||| ||||||||||||| ||||||||  | |||||||||  |||||||||||    
T  20024507 agagagaaacgagtcacaagttgcaatgtatgaatatgtgtaccaatctacattcaatcaatgcattttaagttcattttcttaaatgtctttgcaattt 20024408  T
Q  221 acttgt 226  Q
    ||||||    
T  20024407 acttgt 20024402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 18156174 - 18156329
Alignment:
Q  72 ggtcacaatacattcatatagaatactcacacttaaactatccgcatcta-gagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    ||||||||| || ||||| | || ||| ||||| ||| |||||||||  | ||||||||||||| |  |||  |||||||||||| |||||  |||||||    
T  18156174 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaatctgtgtaccaattta 18156273  T
Q  171 ctttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
      ||||||||||||||||||||||  | ||| |||||  |||| ||||||||||||    
T  18156274 tattcaatcaatgcaatttaagttcattttcctaaatgtctttacaatttacttgt 18156329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 40932982 - 40933059
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattta 221  Q
    ||||||||||||||||||  |||||||| |||||||||| |||||||||||  | | |||||||  ||||||||||||    
T  40932982 caatgtatgaatatgtgtaccaatttacattcaatcaatacaatttaagttcatttccttaaatgtctttgcaattta 40933059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 17432686 - 17432608
Alignment:
Q  145 aatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttactt 224  Q
    ||||||||||| |||||  |||||||| ||||||  ||||||||||||||| |||  ||||||||| |||||||||||||    
T  17432686 aatgtatgaatctgtgtaccaatttacattcaatttatgcaatttaagtttatctctttaaattcc-ttgcaatttactt 17432608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 16832189 - 16832259
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaa 191  Q
    |||||||||||||| |  |||  ||||||||||| ||||||  |||||||| |||||||||||||||||||    
T  16832189 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaa 16832259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 26836309 - 26836235
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagttt 195  Q
    |||||||||| ||| |  |||| | |||||||||| ||||| ||||||||| ||||||  |||||||||||||||    
T  26836309 agagagaaactagtaacaagtctcgatgtatgaatctgtgtatcaatttacattcaatttatgcaatttaagttt 26836235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 14345644 - 14345524
Alignment:
Q  106 aaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaa 205  Q
    ||||||||| ||| |||||||||||||||||| ||||| ||||||||||| |||||   ||||||| ||||||||||||||||||||||||| |  ||||    
T  14345644 aaactatccacatttagagagaaacgagttataagtcaaaatgtatgaatttgtgtactaatttacattcaatcaatgcaatttaagtttgtttctttaa 14345545  T
Q  206 attcctttgcaatttacttgt 226  Q
    ||||||||||||| |||||||    
T  14345544 attcctttgcaatatacttgt 14345524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 55002469 - 55002313
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatca-gtcacaatgtatgaatatgtgtctcaattt 169  Q
    |||||||||| || ||||| | || ||| ||||  ||||||||||||| |||||| | | |||||  || |||||||||||||||| ||||| ||||| |    
T  55002469 gggtcacaattcaatcatacaaaaaacttacacgcaaactatccgcatttagagacagatgagtttacaagtcacaatgtatgaatctgtgtatcaatct 55002370  T
Q  170 actttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||    
T  55002369 actttcaatcaatgcaatttaaatttgttttcttaaattcatttgcaatctacttgt 55002313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 132506 - 132401
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||||||||| ||||||  |||||||| ||||||||||||||||||||||||| |||||||||  |||||||||||    
T  132506 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgttttcttaaatgtctttgcaattt 132407  T
Q  221 acttgt 226  Q
    ||||||    
T  132406 acttgt 132401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 213
Target Start/End: Original strand, 13101884 - 13101997
Alignment:
Q  100 acacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtct 199  Q
    ||||| ||||||||||||| |||||||||||||||||  ||||  ||||||| ||| |||||  |||||||| ||||||||||| ||||||||||||| |    
T  13101884 acactcaaactatccgcatttagagagaaacgagttacaagtcgaaatgtataaatctgtgtaccaatttacattcaatcaatgtaatttaagtttgttt 13101983  T
Q  200 tcttaaattccttt 213  Q
    ||||||||| ||||    
T  13101984 tcttaaattgcttt 13101997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 231
Target Start/End: Original strand, 14000792 - 14000902
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  ||||| ||| ||||||| |||||  |||||||| || |||||||||| |||| |||||| |  ||||||||| |||||||||    
T  14000792 agagagaaacgagtaacaagtcataatatatgaatctgtgtaccaatttacatttaatcaatgcattttacgtttgtttctttaaattccattgcaattt 14000891  T
Q  221 acttgtatttt 231  Q
    |||||| ||||    
T  14000892 acttgtttttt 14000902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 1934702 - 1934593
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  ||||||||| ||||||| |||||  ||| |||| ||||||  ||||||||||||||| |  | ||||||||| |||||||||    
T  1934702 agagagaaacgagtaacaagtcacaatatatgaatctgtgtaccaacttacattcaatttatgcaatttaagtttattcttttaaattcc-ttgcaattt 1934604  T
Q  221 acttgtatttt 231  Q
    |||||| ||||    
T  1934603 acttgtttttt 1934593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 230
Target Start/End: Original strand, 14133367 - 14133490
Alignment:
Q  106 aaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaa 205  Q
    |||||||||||||  |||||||||||||| |  ||||||||||||||||| | |||  |||| ||| ||||||  ||| ||||||||||  |    ||||    
T  14133367 aaactatccgcattcagagagaaacgagtaacaagtcacaatgtatgaatctatgtaccaatatacattcaatttatgaaatttaagttcattcctttaa 14133466  T
Q  206 attcctttgcaatttacttgtattt 230  Q
    ||||| |||||||||||||||||||    
T  14133467 attcc-ttgcaatttacttgtattt 14133490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 218
Target Start/End: Complemental strand, 43135687 - 43135540
Alignment:
Q  72 ggtcacaatacattcatatagaatactcacacttaaactatccgcatcta-gagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    ||||||||| || ||||| | || ||| ||||| ||| |||||||||  | ||||||||||||| |  |||   |||||||||| ||||||  |||||||    
T  43135687 ggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgtaatgtatgaacatgtgtaccaattta 43135588  T
Q  171 ctttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaat 218  Q
    | |||||||||| |||||||||||  | |||||||||  |||||||||    
T  43135587 cattcaatcaatacaatttaagttcattttcttaaatgtctttgcaat 43135540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 18530604 - 18530730
Alignment:
Q  100 acacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtct 199  Q
    ||||| |||||||||||||||||| | ||| || |||  ||||| ||| |||||||  ||||  |||||||| ||||||||||||||||||||||||| |    
T  18530604 acactcaaactatccgcatctagaaaaaaatgatttacaagtcaaaatatatgaatccgtgtaccaatttacattcaatcaatgcaatttaagtttgttt 18530703  T
Q  200 tcttaaattcctttgcaatttacttgt 226  Q
    |||||||||||||||||||||||||||    
T  18530704 tcttaaattcctttgcaatttacttgt 18530730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 21550555 - 21550707
Alignment:
Q  74 tcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactt 173  Q
    ||||||| || ||||| |||| ||| ||||| |||||||||||||  |||||||||||||| |  |||||||||||||||||||||||  |||||||| |    
T  21550555 tcacaattcaatcatacagaaaacttacactcaaactatccgcattcagagagaaacgagtaacaagtcacaatgtatgaatatgtgtaccaatttacat 21550654  T
Q  174 tcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    ||||||||||||||||| |||| | |  ||||||| | ||||| |||||||||    
T  21550655 tcaatcaatgcaatttacgtttatgtatttaaatttcattgcagtttacttgt 21550707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 16406852 - 16406725
Alignment:
Q  100 acacttaaactatccgcat-ctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtc 198  Q
    ||||||||||||||| ||| | |||||||||||||| |  ||| | |||||||||| ||||||  ||||| || ||||||||||||||||||||||| |     
T  16406852 acacttaaactatccacattcaagagagaaacgagtcacaagttataatgtatgaacatgtgtaccaattgacattcaatcaatgcaatttaagtttatt 16406753  T
Q  199 ttcttaaattcctttgcaatttacttgt 226  Q
    |||||||||  |||||||||||||||||    
T  16406752 ttcttaaatgtctttgcaatttacttgt 16406725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 21168399 - 21168294
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||||||||||||||||  |||| ||| ||||||||||||||||||||||  | |||||| ||  |||||||||||    
T  21168399 agagagaaacgagtcacaagttgcaatgtatgaatatgtgtagcaatctacattcaatcaatgcaatttaagttcattttcttacatgtctttgcaattt 21168300  T
Q  221 acttgt 226  Q
    ||||||    
T  21168299 acttgt 21168294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 27902122 - 27902209
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgtatttt 231  Q
    ||||||||||| ||||||  |||||||| ||||||||||||||||||||||  | ||  |||||  ||||||||||||||||||||||    
T  27902122 caatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagttcatttttctaaatgtctttgcaatttacttgtatttt 27902209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 2603515 - 2603433
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    ||||||||||| |||| |  |||||||| ||||||||||||||||||||||  | |||||||||  |||| ||||||||||||    
T  2603515 caatgtatgaacatgtataccaatttacattcaatcaatgcaatttaagttcattttcttaaatgtctttacaatttacttgt 2603433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 27131786 - 27131889
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  || |||||||| ||||||  |||||||| | ||||||||||||||||||||  | |||||||||  |||| ||||||    
T  27131786 agagagaaacgagtcacaagttgcactgtatgaacatgtgtaccaatttacatccaatcaatgcaatttaagttcattttcttaaatgtctttacaattt 27131885  T
Q  221 actt 224  Q
    ||||    
T  27131886 actt 27131889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 4361696 - 4361626
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaa 191  Q
    |||||||||||||| |  |||  |||| |||||| ||||||  |||||||| |||||||||||||||||||    
T  4361696 agagagaaacgagtaacaagttgcaatatatgaacatgtgtaccaatttacattcaatcaatgcaatttaa 4361626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 21382099 - 21382013
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaat 207  Q
    |||||||||||||| |  ||| |||||||||||| ||||||  |||| ||  ||| ||||||||||||||||||  | |||||||||    
T  21382099 agagagaaacgagtcacaagttacaatgtatgaacatgtgtaccaatctatattcgatcaatgcaatttaagttcattttcttaaat 21382013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 21076663 - 21076708
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaattt 189  Q
    ||||||||||||||||||  ||| |||| |||||||||||||||||    
T  21076663 caatgtatgaatatgtgtaccaacttacattcaatcaatgcaattt 21076708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 8887 - 8731
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcat-ctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattt 169  Q
    |||||||||| || ||||| | || ||| ||||| ||||||||| ||| | |||||||||||||| |  ||| |||||||||||| ||||||  ||||||    
T  8887 gggtcacaatccaatcatacacaaaacttacactcaaactatccacattcaagagagaaacgagtcacaagttacaatgtatgaacatgtgtaccaattt 8788  T
Q  170 actttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    || ||||||||||||||||||||||| |  ||||||||  |||||||||||||||||    
T  8787 acattcaatcaatgcaatttaagtttattctcttaaatgtctttgcaatttacttgt 8731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 25858 - 25732
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    |||||||||| || ||||| |||| ||| ||||||||| ||||||||| |||||||||| |||| |  ||||||||||||||||| |||||  |||||||    
T  25858 gggtcacaattcaatcatacagaaaacttacacttaaattatccgcatttagagagaaatgagtaacaagtcacaatgtatgaatctgtgtaccaattta 25759  T
Q  171 ctttcaatcaatgcaatttaagtttgt 197  Q
    | || ||| ||||||||||| ||||||    
T  25758 cgtttaataaatgcaatttacgtttgt 25732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 49526519 - 49526414
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||||||||| ||||||  |||||||| ||||||||||||||||||||||||| ||||||| |  |||||||||||    
T  49526519 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgttttcttaattgtctttgcaattt 49526420  T
Q  221 acttgt 226  Q
    ||||||    
T  49526419 acttgt 49526414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 10267324 - 10267402
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttac 222  Q
    ||||||||||| ||||||  |||||||| ||||||||||||| ||||||||  | |||||||||  |||||||||||||    
T  10267324 caatgtatgaacatgtgtaccaatttacattcaatcaatgcactttaagttcattttcttaaatgtctttgcaatttac 10267402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 50687603 - 50687721
Alignment:
Q  109 ctatccgcat-ctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaat 207  Q
    |||||||||| | ||||| |||||||| |  ||| | |||||||||| ||||||  |||||||| |||||| ||||||||||||||||||  |||||| |    
T  50687603 ctatccgcattcaagagacaaacgagtcacaagttataatgtatgaacatgtgtaccaatttacattcaataaatgcaatttaagtttgttctcttaatt 50687702  T
Q  208 tcctttgcaatttacttgt 226  Q
      ||||||||| |||||||    
T  50687703 gtctttgcaatctacttgt 50687721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 3077976 - 3077895
Alignment:
Q  145 aatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    ||||||||||| |||||  ||| |||| ||||||||||||||||||||||  | |  ||||||  |||||||||||||||||    
T  3077976 aatgtatgaatctgtgtaccaacttacattcaatcaatgcaatttaagttcatttctttaaatgtctttgcaatttacttgt 3077895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 18567062 - 18566961
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||| ||||||||||||  |||||||| ||||| |||| || ||||||||  | |||||||||  |||||||||||    
T  18567062 agagagaaacgagtcacaagttgcaatgaatgaatatgtgtaccaatttacattcaaacaatacactttaagttcattttcttaaatgtctttgcaattt 18566963  T
Q  221 ac 222  Q
    ||    
T  18566962 ac 18566961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 27812347 - 27812266
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    |||||||||||||||| |  |||||||| ||||||  ||||||||||||||| |    ||||||||| |||||||||||||||    
T  27812347 caatgtatgaatatgtctaccaatttacattcaatttatgcaatttaagtttattcctttaaattcc-ttgcaatttacttgt 27812266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 1658665 - 1658738
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtt 194  Q
    |||||||||||||| |  |||  ||||||||||||||||||  ||| |||| |||||||||| ||||| |||||    
T  1658665 agagagaaacgagtcacaagttgcaatgtatgaatatgtgtaccaacttacattcaatcaatacaattcaagtt 1658738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 9083 - 9165
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    ||||||||||||||||||  |||| ||| ||||||||||||||||||||||  | |||||||||  |||||||||||||||||    
T  9083 caatgtatgaatatgtgtaccaatctacattcaatcaatgcaatttaagttcattttcttaaatgtctttgcaatttacttgt 9165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 1460 - 1355
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||||||||| ||||||  |||||||| ||||||||||||||||||||||  | |||||||||  |||| ||||||    
T  1460 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagttcattttcttaaatgtctttacaattt 1361  T
Q  221 acttgt 226  Q
    ||||||    
T  1360 acttgt 1355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1496 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 226
Target Start/End: Original strand, 1426 - 1580
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    |||||||||| || |||||  ||| ||| ||||| |||||||| ||||   ||||||||||||| |  ||||| ||||||||||| |||||  |||||||    
T  1426 gggtcacaattcaatcatacggaaaacttacactcaaactatctgcattcggagagaaacgagtaacaagtcagaatgtatgaatctgtgtaccaattta 1525  T
Q  171 ctttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    | |||||||| |||||||||  ||||| |  ||||||| | |||||||||||||||    
T  1526 cattcaatcattgcaatttacttttgt-tatttaaatttcattgcaatttacttgt 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 16597348 - 16597197
Alignment:
Q  76 acaatacattcatatagaatactcacacttaaactatccgcatcta-gagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttacttt 174  Q
    ||||| || ||||||| || ||| ||||| ||| |||||||||  | || |||||||||| |  |||  ||||||||||| ||||||  |||||||| ||    
T  16597348 acaatccaatcatataaaaaacttacactcaaattatccgcatggaagaaagaaacgagtgacaagttgcaatgtatgaacatgtgtaccaatttacatt 16597249  T
Q  175 caatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    ||||||||||||||||||||  | |||||||||  |||| ||||||||||||    
T  16597248 caatcaatgcaatttaagttcattttcttaaatgtctttacaatttacttgt 16597197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 26460692 - 26460537
Alignment:
Q  72 ggtcacaatacattcatatagaatactcacacttaaactatccgcatcta-gagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    ||||||||| || ||||| | || ||| ||||| ||| |||||||||  | |||| |||||||| |  |||  ||||||||||| ||||||  |||||||    
T  26460692 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcatggaagagataaacgagtcacaagttgcaatgtatgaacatgtgtaccaattta 26460593  T
Q  171 ctttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    | ||||||||||||||||||||||  | |||||||||  |||| ||||||||||||    
T  26460592 cattcaatcaatgcaatttaagttcattttcttaaatgtctttacaatttacttgt 26460537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 19272343 - 19272263
Alignment:
Q  146 atgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    ||||||||| ||||||  |||||||| ||||||||||||||||||||||| | ||||||||   |||| ||||||||||||    
T  19272343 atgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttattttcttaaacgtctttacaatttacttgt 19272263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 18258161 - 18258075
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaat 207  Q
    |||||||||||||| |  |||  ||||||||||| |||||| ||||||||| |||||||||| |||||||||||  | |||||||||    
T  18258161 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtatcaatttacattcaatcaatacaatttaagttcattttcttaaat 18258075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 19084721 - 19084783
Alignment:
Q  164 caatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    |||||||| ||||||||||||||||||||||| | ||||||| |  |||||||||||||||||    
T  19084721 caatttacattcaatcaatgcaatttaagtttattttcttaattgtctttgcaatttacttgt 19084783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20440693 - 20440811
Alignment:
Q  1 ttatagtttcaaatgtctatgtgcaggtagnnnnnnnnagtataaataaaagtttctcataggnnnnnnngggtcacaatacattcatatagaatactca 100  Q
    |||||||||||||||||| |||| ||||||        ||||||||||| |||||||||||||       || ||||||||||||||||||||| ||| |    
T  20440693 ttatagtttcaaatgtctgtgtgtaggtagttttttt-agtataaataacagtttctcatagggaaaagagg-tcacaatacattcatatagaaaactta 20440790  T
Q  101 cacttaaactatccgcatcta 121  Q
    |||| ||||||||||||||||    
T  20440791 cactcaaactatccgcatcta 20440811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20438070 - 20438188
Alignment:
Q  1 ttatagtttcaaatgtctatgtgcaggtagnnnnnnnnagtataaataaaagtttctcataggnnnnnnngggtcacaatacattcatatagaatactca 100  Q
    |||||||||||||||||| |||| ||||||        ||||||||||| |||||||||||||       || ||||||||||||||||||||| ||| |    
T  20438070 ttatagtttcaaatgtctgtgtgtaggtagttttttt-agtataaataacagtttctcatagggaaaagagg-tcacaatacattcatatagaaaactta 20438167  T
Q  101 cacttaaactatccgcatcta 121  Q
    |||| |||||| |||||||||    
T  20438168 cactcaaactacccgcatcta 20438188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 11794204 - 11794282
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttac 222  Q
    ||||||||||| ||||||  ||| |||| |||||||||| |||||||||||  | |||||||||  || ||||||||||    
T  11794204 caatgtatgaacatgtgtaccaacttacattcaatcaatacaatttaagttcattttcttaaatgtctctgcaatttac 11794282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 20450757 - 20450806
Alignment:
Q  72 ggtcacaatacattcatatagaatactcacacttaaactatccgcatcta 121  Q
    |||||||||||||||| |||||| ||| ||||| |||||| |||||||||    
T  20450757 ggtcacaatacattcaaatagaaaacttacactcaaactagccgcatcta 20450806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 660 - 573
Alignment:
Q  139 agtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    ||||||||||||||||| |||||  | |||||| ||| |||||||||||||| |||| | |  ||||||||| |||||||||||||||    
T  660 agtcacaatgtatgaatctgtgtaccgatttacattcgatcaatgcaatttatgtttatttctttaaattccattgcaatttacttgt 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 5571 - 5671
Alignment:
Q  71 gggtcacaatacattcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaattta 170  Q
    |||||||||| || |||||||||| ||| ||||| |||||||||||||  ||||||||| |||| |  ||||||||||||  ||| |||||  |||||||    
T  5571 gggtcacaattcaatcatatagaaaacttacactcaaactatccgcattcagagagaaatgagtaacaagtcacaatgtagtaatctgtgtaccaattta 5670  T
Q  171 c 171  Q
    |    
T  5671 c 5671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 1 - 81
Alignment:
Q  91 agaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttac 171  Q
    |||| ||| ||||| |||||||||||||  ||||||||| |||| |  |||||||||||| |||| |||||  ||||||||    
T  1 agaaaacttacactcaaactatccgcattcagagagaaatgagtaacaagtcacaatgtaggaatctgtgtaccaatttac 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 3756 - 3682
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagttt 195  Q
    |||||||||||||| |  |||  ||||||||||||||||||  |||| ||| ||||||||||||| |||||||||    
T  3756 agagagaaacgagtcaaaagttgcaatgtatgaatatgtgtaccaatctacattcaatcaatgcattttaagttt 3682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 31315 - 31205
Alignment:
Q  85 tcatatagaatactcacacttaaactatccgcatctagagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgc 184  Q
    ||||| |||| ||| ||||| ||||||||| |||  | ||||||||| || |  | ||||||||||||||| |||||  |||||||| ||||||  ||||    
T  31315 tcatacagaaaactaacactcaaactatccacattcaaagagaaacgcgtaacaaatcacaatgtatgaatctgtgtaccaatttacattcaatttatgc 31216  T
Q  185 aatttaagttt 195  Q
    |||||||||||    
T  31215 aatttaagttt 31205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 12424 - 12506
Alignment:
Q  144 caatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgt 226  Q
    ||||||||||| ||||||  |||||| | ||||| ||||||||||||||||  | |||||||||  |||| ||||||||||||    
T  12424 caatgtatgaacatgtgtaccaatttgcattcaaccaatgcaatttaagttcattttcttaaatgtctttacaatttacttgt 12506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 207
Target Start/End: Original strand, 70667 - 70801
Alignment:
Q  74 tcacaatacattcatatagaatactcacacttaaactatccgcatcta-gagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttact 172  Q
    ||||||| || ||||| | |||||| ||||| ||| |||||||||  | ||||||||||||| |  |||  ||||||||||| |||| |  ||||||||     
T  70667 tcacaattcaatcatacaaaatacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtttaccaatttaca 70766  T
Q  173 ttcaatcaatgcaatttaagtttgtcttcttaaat 207  Q
    |||| |||||||||||||||||  | |||||||||    
T  70767 ttcagtcaatgcaatttaagttcattttcttaaat 70801  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 102060 - 101986
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagttt 195  Q
    |||||||||||||| |  |||  ||||||||||||||||||  |||| ||| ||||||||||||| |||||||||    
T  102060 agagagaaacgagtcaaaagttgcaatgtatgaatatgtgtaccaatctacattcaatcaatgcattttaagttt 101986  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 250134 - 250032
Alignment:
Q  124 gagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttact 223  Q
    ||||||||||| |  |||  |||||||||||| |||||  |||||||| |||||||||| || ||||||||| | ||||||| | ||||| || ||||||    
T  250134 gagaaacgagtcacaagttgcaatgtatgaatttgtgtaccaatttacattcaatcaatacattttaagtttattttcttaagtgcctttacattttact 250035  T
Q  224 tgt 226  Q
    |||    
T  250034 tgt 250032  T

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Target: scaffold0417 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 1376 - 1480
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||||||||  ||||||  |||||||| ||||||||||||| ||||||||| | ||| |||||  ||||||| |||    
T  1376 agagagaaacgagtcacaagttgcaatgtatgatcatgtgtaccaatttacattcaatcaatgcagtttaagttttttttc-taaatatctttgcatttt 1474  T
Q  221 acttgt 226  Q
    ||||||    
T  1475 acttgt 1480  T

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Target: scaffold0151 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 14200 - 14099
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaattt 220  Q
    |||||||||||||| |  |||  ||||||||||| ||||||  |||||||| ||||||||||  | ||||||||  | |||||||||  |||||||||||    
T  14200 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatttattttaagttcattttcttaaatgtctttgcaattt 14101  T
Q  221 ac 222  Q
    ||    
T  14100 ac 14099  T

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Target: scaffold0093 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 43726 - 43652
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagttt 195  Q
    |||||||||||||| |  |||| | |||||||||| |||||  |||||||| ||||||  |||||||||||||||    
T  43726 agagagaaacgagtaacaagtctcgatgtatgaatctgtgtaccaatttacattcaatttatgcaatttaagttt 43652  T

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Target: scaffold0190 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 7499 - 7572
Alignment:
Q  121 agagagaaacgagttatcagtcacaatgtatgaatatgtgtctcaatttactttcaatcaatgcaatttaagtt 194  Q
    |||||||||||||| |  |||  ||||||||||| |||||| |||| |||| |||||||||| ||||| |||||    
T  7499 agagagaaacgagtcacaagttgcaatgtatgaacatgtgtatcaacttacattcaatcaatacaattaaagtt 7572  T

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