View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19513_high_5 (Length: 365)
Name: NF19513_high_5
Description: NF19513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19513_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 19 - 353
Target Start/End: Complemental strand, 33689258 - 33688924
Alignment:
| Q |
19 |
aatatagttaattaacagaatattcttttaccttttcaagataaatttgatgataaaatgaagaaatgtaagactttggataaatggagaaatggcaatt |
118 |
Q |
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| T |
33689258 |
aatatagttaattaacagaatattcttttactttttcaagatgaatttgatgataaaatgaagaaatgtaaaactttggataaatggagaaatggcaatt |
33689159 |
T |
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| Q |
119 |
aaacttaagttcactacccaagacttatagcatatatagtacgtataattagacatataaacgttatagtataagtcaacatacattcttaatgtgtact |
218 |
Q |
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| T |
33689158 |
aaacttaagttcactacccaagacttatagcatatatagtacgtataattagacatataaacgttatagtataagtcaacatacattcttaatgtgtact |
33689059 |
T |
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| Q |
219 |
agaagattaatggctatttaggcagcacatggaaatcaaatggcatgtgtaaactaaatccttatgatatagttaaagctattgtagaagaaaattgacg |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33689058 |
agaagattaatggctatttaggcagcacatggaaatcaaatggcatgtgtaaactaaatccttatgatatagttaaagctattgtagaagaaaattgacg |
33688959 |
T |
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| Q |
319 |
agttccatattttcatgctccaaaatattgatatt |
353 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
33688958 |
agttccatattttcatgctccaaaatattgatatt |
33688924 |
T |
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