View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19513_low_12 (Length: 318)
Name: NF19513_low_12
Description: NF19513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19513_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 33296734 - 33296473
Alignment:
| Q |
1 |
gatcttgatggtcctgatatatagttcgttgttgctctcggtgctagatgaacttctcatcctagagtccaaattgttttatcaatgatatgagacataa |
100 |
Q |
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| T |
33296734 |
gatcttgatggtcctgatatatagttcgttgttgctctcggtgctagatgaacttctcatcctagagtccaaattgttttatcaatgatatgagacataa |
33296635 |
T |
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| Q |
101 |
aagtagaatcctataaaagataatataattctctaaattttatgtccaaagtaggcactagaatggaaaaagtatgaagagatgttagacaaaaaggcac |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33296634 |
aagtagaaccctataaaagataatataattctctaaattttatgtccaaagtaggcactagaatggaaaaagtatgaagagatgttagacaaaaaggcac |
33296535 |
T |
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| Q |
201 |
attcctaactctataataaaaaataattttgggagtgcaatcatcccacacactccctaatc |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33296534 |
attcctaactctataataaaaaataattttgggagtgcaatcatcccacacactccctaatc |
33296473 |
T |
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