View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19514_high_15 (Length: 312)
Name: NF19514_high_15
Description: NF19514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19514_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 16 - 296
Target Start/End: Complemental strand, 33408801 - 33408521
Alignment:
| Q |
16 |
attaaacaagttataaacacatgtacaatattattataagaatataataatcttctcctttttcacagtattaaactttatacagaaccacctcaaacca |
115 |
Q |
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| T |
33408801 |
attaaacaagttataaacacatgtacaatattattataagaatataataatcttctcctttttcacagtattaaactttatacagaaccacctcaaacca |
33408702 |
T |
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| Q |
116 |
tagtctcatctaattttgaaaatatgattgaccttgagccatgacagttttgctcatatccacaagataatttacaataaccattacaacaattatcaca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33408701 |
tagtctcatctaattttgaaaatatgattgaccttgagccatgacagttttgctcatatccacaagataatttacaataaccattacaacaattatcaca |
33408602 |
T |
|
| Q |
216 |
accatgaatttaagagcaacctctctagtagtttctacattattttcaccaaacttgttgtcttttctgtaagtatattct |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
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| T |
33408601 |
accatgaatttaagagcaacctctctagtagtttctacatcattttcaccaaacttgttgtctgttctgtaagtatattct |
33408521 |
T |
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