View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19514_low_26 (Length: 254)
Name: NF19514_low_26
Description: NF19514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19514_low_26 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 4440423 - 4440659
Alignment:
| Q |
18 |
gaacgaccacaaacacatcaatattagcagaaaacttctatgtaccacactgccatgcttaggaggcaagtcccttcatttgagaatcatttgaggaaca |
117 |
Q |
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| T |
4440423 |
gaacgaccacaaacacatcaatattagcagaaaacttctatgtaccacactgccatgcttaggaggcaagtcccttcatttgagaatcatttgaggaaca |
4440522 |
T |
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| Q |
118 |
ttggaaagcaatgcatttctccaccctattggaactttgtaggactattgcttctcttgttgccaatgctattgtgccaggaacaattaacatcctatct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
4440523 |
ttggaaagcaatgcatttctccaccctattggaactttgtaggattattgcttctcttgttgccaatgctattgtgccaggaataattaacatcctatct |
4440622 |
T |
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| Q |
218 |
aattctttagactaattaaattcaacaaattcaggcc |
254 |
Q |
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|||||||||||| |||||||||||||||||||||||| |
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| T |
4440623 |
aattctttagacaaattaaattcaacaaattcaggcc |
4440659 |
T |
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