View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19516_high_13 (Length: 451)
Name: NF19516_high_13
Description: NF19516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19516_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 415; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 16 - 434
Target Start/End: Original strand, 21826316 - 21826734
Alignment:
| Q |
16 |
aatatgtgtcggtgtcgaacacgtgctttccctttgattgttcactttgaatttcatttacatttcttgtatcttgtctataatgtttatgtagcttact |
115 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21826316 |
aatatgtgtcggtgtcggacacgtgctttccctttgattgttcactttgaatttcatttacatttcttgtatcttgtctataatgtttatgtagcttact |
21826415 |
T |
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| Q |
116 |
aaccaaaagcatacatatcatcaaaattgccacacatgatatgccaatctaataagaaaaactcaatttacatttaacctgtgccatttcttgctctttc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21826416 |
aaccaaaagcatacatatcatcaaaattgccacacatgatatgccaatctaataagaaaaactcaatttacatttaacctgtgccatttcttgctctttc |
21826515 |
T |
|
| Q |
216 |
atatggaaaaagttactaattttaattttacaaaatgttaagcagggcttccaaaaagatgagcttgcctacccatccttcttggcaatccaaaattctg |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21826516 |
atatggaaaaagttactaattttaattttacaaaatgttaagcagggcttccaaaaagatgagcttgcctacccatccttcttggcaatccaaaattctg |
21826615 |
T |
|
| Q |
316 |
ataacatcttatttcacctccaaatcccgctgttactattaccaaaccccatgctgaaggatgaactgctgaggagccatcatatgctgaataattagaa |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21826616 |
ataacatcttatttcacctccaaatcccgctgttactattaccaaaccccatgctgaaggatgaactgctgaggagccatcatatgctgaataattagaa |
21826715 |
T |
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| Q |
416 |
gaccaagatgaacctgatg |
434 |
Q |
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||||||||||||||||||| |
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| T |
21826716 |
gaccaagatgaacctgatg |
21826734 |
T |
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