View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19516_high_24 (Length: 209)
Name: NF19516_high_24
Description: NF19516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19516_high_24 |
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Alignment Details
Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 20503874 - 20503704
Alignment:
| Q |
19 |
atgaaggcctagacataatagaagaatatattttaccttaactatgtaatccttttacattcaccatcgatgcacttcataggtacaagaggggggccca |
118 |
Q |
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| T |
20503874 |
atgaaggcctagacataatagaacaatatattttaccttaactatgtaatccttttacattcaccatcgatgcatttcataggtataagaggagggccca |
20503775 |
T |
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| Q |
119 |
aaaatatttcataacaatcgatgtcattagcacattcttctgtaatgttgaatcataataaataaataaat |
189 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |
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| T |
20503774 |
aaaatattttataacaatcgatgtcattagcacattcttctgtaatgtaaaataagaataaataaataaat |
20503704 |
T |
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