View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19516_high_7 (Length: 544)
Name: NF19516_high_7
Description: NF19516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19516_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 530; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 530; E-Value: 0
Query Start/End: Original strand, 1 - 534
Target Start/End: Original strand, 28675168 - 28675701
Alignment:
| Q |
1 |
gatgatggtgatgtgaagaagaggaaggagcgtgaatttgaggatggagggtatttatgtaaagggaaatgggagttgttgaggaaggattgttttaatc |
100 |
Q |
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| T |
28675168 |
gatgatggtgatgtgaagaagaggaaggagcgtgaatttgaggatggagggtatttatgtaaagggaaatgggagttgttgaggaaggattgttttaatc |
28675267 |
T |
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| Q |
101 |
aggctccggcgaaggtttcagcttgtgattatcatagagggttggatatggtggttgttggattttctaatggggtttttgggttgtatcagatgccgga |
200 |
Q |
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| T |
28675268 |
aggctccggcgaaggtttcagcttgtgattatcatagagggttggatatggtggttgttggattttctaatggggtttttgggttgtatcagatgccgga |
28675367 |
T |
|
| Q |
201 |
tttcgtgtgtattcatttgttgtcgatatcgaaggcgaagattactactgctatgtttaatgatcttgggaattggttgtcctttggctgtgctaaactt |
300 |
Q |
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| T |
28675368 |
tttcgtgtgtattcatttgttgtcgatatcgaaggcgaagattactactgctatgtttaatgatcttgggaattggttgtcctttggctgtgctaaactt |
28675467 |
T |
|
| Q |
301 |
ggccagcttcttgtgtgggagtggcggtctgagagttatattttgaagcagcagggtcattactttgatgttaattgtgtcgcatattcgcaggattctc |
400 |
Q |
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| T |
28675468 |
ggccagcttcttgtgtgggagtggcggtctgaaagttatattttgaagcagcagggtcattactttgatgttaattgtgtcgcatattcgcaggattctc |
28675567 |
T |
|
| Q |
401 |
aactccttgctactggagcagatgataataaagtgaaggtattcactctcacattgtactttttgctaattaatatttggtttgaatttctaagataaaa |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28675568 |
aactccttgctactggagcagatgataataaagtgaaggtattcactctcacattgtactttttgctaattaatatttggtttgaatttctaagataaaa |
28675667 |
T |
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| Q |
501 |
tgaactgtgcaaacactgaattgatcatgatgat |
534 |
Q |
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| T |
28675668 |
tgaactgtgcaaacactgaattgatcatgatgat |
28675701 |
T |
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