View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1951_low_5 (Length: 328)

Name: NF1951_low_5
Description: NF1951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1951_low_5
NF1951_low_5
[»] chr4 (65 HSPs)
chr4 (1-164)||(47867882-47868047)
chr4 (1-163)||(20281594-20281758)
chr4 (5-164)||(2229254-2229415)
chr4 (1-164)||(4058718-4058883)
chr4 (1-164)||(26916328-26916493)
chr4 (1-164)||(14332763-14332928)
chr4 (1-164)||(20716183-20716348)
chr4 (1-164)||(39078160-39078324)
chr4 (14-164)||(7654633-7654785)
chr4 (1-164)||(29203509-29203674)
chr4 (1-164)||(41414595-41414759)
chr4 (1-156)||(56318062-56318219)
chr4 (1-162)||(55580672-55580836)
chr4 (1-164)||(10069700-10069865)
chr4 (1-164)||(24940368-24940533)
chr4 (34-156)||(16604838-16604960)
chr4 (1-164)||(17794525-17794690)
chr4 (1-164)||(28668985-28669149)
chr4 (3-164)||(35310726-35310889)
chr4 (3-164)||(48793614-48793773)
chr4 (3-164)||(8683290-8683451)
chr4 (3-164)||(5483262-5483425)
chr4 (3-161)||(42915534-42915695)
chr4 (76-156)||(16473828-16473908)
chr4 (3-164)||(50080440-50080598)
chr4 (1-164)||(1585333-1585496)
chr4 (54-164)||(21722666-21722776)
chr4 (3-164)||(12002617-12002782)
chr4 (2-154)||(46070517-46070668)
chr4 (60-164)||(32203277-32203381)
chr4 (61-164)||(32323246-32323349)
chr4 (34-149)||(47516190-47516305)
chr4 (62-164)||(5064639-5064741)
chr4 (1-84)||(35529675-35529760)
chr4 (3-125)||(5815474-5815598)
chr4 (29-122)||(17186822-17186914)
chr4 (3-164)||(19351851-19352020)
chr4 (38-158)||(17799124-17799244)
chr4 (1-156)||(52535589-52535734)
chr4 (3-164)||(25297204-25297369)
chr4 (3-136)||(31280204-31280329)
chr4 (40-142)||(32280009-32280111)
chr4 (3-164)||(14583734-14583897)
chr4 (34-122)||(5841805-5841893)
chr4 (34-126)||(50145774-50145865)
chr4 (61-164)||(32410393-32410496)
chr4 (34-164)||(8013073-8013203)
chr4 (61-122)||(29511490-29511551)
chr4 (1-162)||(30011913-30012074)
chr4 (60-164)||(28142606-28142710)
chr4 (2-122)||(8178265-8178387)
chr4 (108-158)||(7438760-7438810)
chr4 (60-118)||(49080321-49080379)
chr4 (2-94)||(23978169-23978263)
chr4 (60-122)||(28318445-28318505)
chr4 (60-162)||(29899774-29899876)
chr4 (60-122)||(37911948-37912010)
chr4 (54-164)||(53848518-53848628)
chr4 (105-157)||(31532444-31532496)
chr4 (121-164)||(4443084-4443126)
chr4 (60-123)||(50768504-50768567)
chr4 (60-162)||(29180371-29180473)
chr4 (60-94)||(40411165-40411199)
chr4 (36-158)||(40553809-40553935)
chr4 (40-148)||(25268523-25268631)
[»] chr1 (76 HSPs)
chr1 (3-164)||(2126045-2126208)
chr1 (1-164)||(33369558-33369720)
chr1 (1-164)||(15959631-15959796)
chr1 (1-164)||(24190475-24190639)
chr1 (1-164)||(13136545-13136707)
chr1 (1-164)||(6786843-6787008)
chr1 (1-164)||(32623996-32624161)
chr1 (1-164)||(39555577-39555742)
chr1 (1-164)||(43667294-43667457)
chr1 (40-164)||(11241073-11241197)
chr1 (1-154)||(12448969-12449123)
chr1 (1-161)||(6785461-6785622)
chr1 (1-164)||(28016737-28016900)
chr1 (1-164)||(35691397-35691562)
chr1 (1-164)||(32983163-32983326)
chr1 (1-164)||(45226143-45226308)
chr1 (1-164)||(40718683-40718848)
chr1 (1-156)||(42965815-42965970)
chr1 (1-164)||(46542989-46543152)
chr1 (1-161)||(47600030-47600195)
chr1 (1-156)||(7467961-7468119)
chr1 (3-164)||(3076302-3076465)
chr1 (1-162)||(28120748-28120911)
chr1 (1-151)||(3861699-3861849)
chr1 (3-164)||(44148827-44148986)
chr1 (3-164)||(24728617-24728781)
chr1 (40-164)||(52984979-52985103)
chr1 (1-156)||(1820420-1820577)
chr1 (1-164)||(33431566-33431729)
chr1 (1-164)||(3875010-3875177)
chr1 (3-143)||(37735395-37735537)
chr1 (1-165)||(46818492-46818658)
chr1 (1-151)||(39932576-39932728)
chr1 (34-161)||(47014487-47014612)
chr1 (54-164)||(1034917-1035025)
chr1 (33-164)||(32742193-32742324)
chr1 (40-154)||(30221771-30221885)
chr1 (3-137)||(43765301-43765438)
chr1 (1-143)||(2246026-2246170)
chr1 (1-137)||(25391689-25391824)
chr1 (1-95)||(6787050-6787145)
chr1 (8-164)||(7875931-7876091)
chr1 (3-115)||(10558796-10558910)
chr1 (38-164)||(32318551-32318677)
chr1 (3-160)||(47302903-47303060)
chr1 (1-98)||(16854145-16854244)
chr1 (60-164)||(50176588-50176692)
chr1 (33-164)||(16688175-16688306)
chr1 (87-161)||(4672924-4672998)
chr1 (34-164)||(37538849-37538979)
chr1 (2-164)||(7397712-7397876)
chr1 (2-164)||(45840057-45840220)
chr1 (34-122)||(5950479-5950567)
chr1 (34-164)||(50370002-50370120)
chr1 (2-122)||(5858404-5858526)
chr1 (33-164)||(298659-298791)
chr1 (3-110)||(23392211-23392319)
chr1 (1-164)||(50012596-50012749)
chr1 (54-123)||(8889729-8889798)
chr1 (10-74)||(14086966-14087030)
chr1 (60-164)||(30701376-30701480)
chr1 (1-162)||(36383929-36384092)
chr1 (55-162)||(52841438-52841545)
chr1 (60-98)||(13351746-13351784)
chr1 (2-156)||(25185302-25185459)
chr1 (61-96)||(15912265-15912300)
chr1 (49-156)||(35366202-35366309)
chr1 (2-122)||(44510252-44510374)
chr1 (60-164)||(25990810-25990914)
chr1 (1-162)||(46949322-46949485)
chr1 (60-162)||(23873823-23873925)
chr1 (60-162)||(35884273-35884375)
chr1 (60-162)||(38942437-38942539)
chr1 (2-93)||(41063747-41063840)
chr1 (66-156)||(46803670-46803760)
chr1 (4-82)||(47026655-47026736)
[»] chr5 (52 HSPs)
chr5 (1-164)||(6686389-6686555)
chr5 (1-164)||(42273654-42273817)
chr5 (1-164)||(43589953-43590118)
chr5 (3-164)||(20644021-20644184)
chr5 (2-152)||(37522592-37522744)
chr5 (1-164)||(37562752-37562918)
chr5 (1-164)||(11261875-11262040)
chr5 (1-161)||(34425336-34425497)
chr5 (1-162)||(20039107-20039270)
chr5 (1-155)||(38130113-38130272)
chr5 (1-140)||(8225468-8225608)
chr5 (3-164)||(25840871-25841034)
chr5 (3-158)||(19413148-19413305)
chr5 (1-136)||(32111007-32111144)
chr5 (1-116)||(38280852-38280969)
chr5 (3-164)||(17351395-17351558)
chr5 (4-156)||(43454322-43454476)
chr5 (3-143)||(42104262-42104402)
chr5 (3-164)||(39505223-39505386)
chr5 (34-156)||(12912294-12912415)
chr5 (3-164)||(4463367-4463528)
chr5 (1-164)||(9957426-9957572)
chr5 (34-164)||(12792777-12792897)
chr5 (49-137)||(5984126-5984214)
chr5 (34-164)||(23233451-23233581)
chr5 (3-150)||(41625517-41625664)
chr5 (38-164)||(12729876-12729991)
chr5 (1-94)||(32017709-32017803)
chr5 (62-164)||(5736231-5736333)
chr5 (84-153)||(32019911-32019980)
chr5 (34-98)||(104271-104335)
chr5 (34-122)||(5369064-5369152)
chr5 (61-121)||(8959707-8959767)
chr5 (2-96)||(10153987-10154083)
chr5 (60-148)||(16153353-16153440)
chr5 (1-162)||(24439575-24439738)
chr5 (55-162)||(30893243-30893350)
chr5 (3-98)||(7071245-7071342)
chr5 (2-164)||(3463808-3463970)
chr5 (63-156)||(32079573-32079666)
chr5 (60-156)||(8506497-8506593)
chr5 (60-122)||(1144524-1144586)
chr5 (60-162)||(31690613-31690715)
chr5 (60-121)||(29307221-29307282)
chr5 (60-124)||(13146793-13146857)
chr5 (34-118)||(30703641-30703725)
chr5 (36-91)||(5659584-5659639)
chr5 (60-162)||(16286076-16286178)
chr5 (1-75)||(29493592-29493668)
chr5 (34-122)||(6391909-6391997)
chr5 (40-156)||(8143978-8144094)
chr5 (60-156)||(18718645-18718741)
[»] chr8 (53 HSPs)
chr8 (1-164)||(34890166-34890331)
chr8 (1-164)||(7022395-7022560)
chr8 (1-164)||(26483535-26483700)
chr8 (1-164)||(7858531-7858696)
chr8 (1-164)||(36190775-36190940)
chr8 (1-164)||(43216339-43216504)
chr8 (1-161)||(24892841-24893006)
chr8 (1-164)||(34158282-34158448)
chr8 (1-155)||(28348614-28348769)
chr8 (3-136)||(31734120-31734255)
chr8 (2-163)||(8711881-8712039)
chr8 (42-164)||(13143937-13144060)
chr8 (34-164)||(30575826-30575957)
chr8 (1-148)||(15957919-15958070)
chr8 (1-164)||(41086378-41086543)
chr8 (1-160)||(8107613-8107774)
chr8 (3-164)||(29920260-29920423)
chr8 (34-164)||(16358104-16358233)
chr8 (1-164)||(8709778-8709941)
chr8 (1-136)||(13143767-13143904)
chr8 (1-143)||(35456038-35456181)
chr8 (34-148)||(35525625-35525737)
chr8 (3-164)||(4046885-4047049)
chr8 (2-161)||(41362302-41362463)
chr8 (1-164)||(7499729-7499883)
chr8 (3-164)||(15824629-15824786)
chr8 (3-98)||(2052841-2052936)
chr8 (36-164)||(44663784-44663909)
chr8 (3-148)||(16879400-16879547)
chr8 (34-164)||(17713261-17713391)
chr8 (1-87)||(3642039-3642126)
chr8 (35-160)||(8745622-8745747)
chr8 (55-162)||(8712583-8712690)
chr8 (80-164)||(2052947-2053031)
chr8 (34-162)||(2628158-2628286)
chr8 (60-164)||(17336806-17336910)
chr8 (60-164)||(38072227-38072331)
chr8 (2-122)||(8673385-8673507)
chr8 (34-96)||(26954452-26954514)
chr8 (41-161)||(28497133-28497253)
chr8 (62-164)||(4038874-4038975)
chr8 (62-132)||(4480841-4480911)
chr8 (61-164)||(33563499-33563606)
chr8 (112-164)||(45190700-45190752)
chr8 (2-118)||(25195085-25195202)
chr8 (34-164)||(5217430-5217559)
chr8 (110-156)||(11158675-11158721)
chr8 (60-162)||(40773397-40773499)
chr8 (60-162)||(3100018-3100120)
chr8 (60-162)||(34713593-34713695)
chr8 (54-95)||(14576213-14576254)
chr8 (3-93)||(41755931-41756022)
chr8 (61-93)||(14693434-14693466)
[»] chr7 (45 HSPs)
chr7 (1-164)||(45485960-45486125)
chr7 (1-164)||(46760247-46760412)
chr7 (3-164)||(19912759-19912922)
chr7 (1-164)||(14805875-14806039)
chr7 (1-164)||(15252869-15253033)
chr7 (1-164)||(18102535-18102700)
chr7 (1-164)||(25737617-25737782)
chr7 (1-164)||(35923257-35923421)
chr7 (1-143)||(20123691-20123835)
chr7 (1-164)||(6191050-6191215)
chr7 (1-156)||(25944581-25944738)
chr7 (34-164)||(12632334-12632464)
chr7 (1-164)||(4910625-4910788)
chr7 (3-164)||(47779611-47779774)
chr7 (3-164)||(22632096-22632259)
chr7 (3-164)||(44682885-44683047)
chr7 (1-156)||(14574569-14574726)
chr7 (4-131)||(47557622-47557753)
chr7 (3-164)||(16917479-16917641)
chr7 (1-156)||(15995724-15995882)
chr7 (3-136)||(2610586-2610721)
chr7 (1-98)||(9158095-9158193)
chr7 (49-130)||(35068872-35068954)
chr7 (102-162)||(37767011-37767071)
chr7 (2-160)||(39170540-39170700)
chr7 (3-140)||(48413728-48413859)
chr7 (1-148)||(11780023-11780171)
chr7 (21-95)||(8015732-8015806)
chr7 (60-164)||(10248594-10248700)
chr7 (62-164)||(35887959-35888061)
chr7 (34-164)||(38260356-38260486)
chr7 (61-122)||(31768994-31769055)
chr7 (34-98)||(4069043-4069107)
chr7 (34-162)||(29713229-29713357)
chr7 (41-121)||(31549936-31550016)
chr7 (3-85)||(27810804-27810888)
chr7 (1-162)||(33153039-33153202)
chr7 (64-96)||(24151640-24151672)
chr7 (60-156)||(40560443-40560539)
chr7 (60-156)||(48879449-48879545)
chr7 (3-157)||(19492390-19492548)
chr7 (60-162)||(18206270-18206372)
chr7 (36-162)||(35084052-35084178)
chr7 (60-162)||(43107856-43107958)
chr7 (60-124)||(41815682-41815746)
[»] chr6 (23 HSPs)
chr6 (1-156)||(11082244-11082401)
chr6 (5-164)||(21542427-21542588)
chr6 (1-164)||(35129045-35129211)
chr6 (1-164)||(3095711-3095875)
chr6 (1-164)||(34177632-34177797)
chr6 (3-164)||(7274866-7275029)
chr6 (3-164)||(30794183-30794346)
chr6 (3-164)||(12461420-12461583)
chr6 (7-164)||(17751735-17751894)
chr6 (1-124)||(31107196-31107320)
chr6 (39-164)||(14573119-14573243)
chr6 (60-122)||(16524443-16524505)
chr6 (2-164)||(4031991-4032158)
chr6 (2-164)||(4987947-4988115)
chr6 (106-164)||(9428857-9428915)
chr6 (60-122)||(16013465-16013527)
chr6 (66-162)||(5822027-5822123)
chr6 (54-96)||(5300659-5300701)
chr6 (1-155)||(17598294-17598450)
chr6 (35-162)||(5881746-5881872)
chr6 (61-164)||(15830760-15830863)
chr6 (63-122)||(3888494-3888553)
chr6 (1-68)||(9428775-9428844)
[»] chr3 (74 HSPs)
chr3 (1-164)||(37042367-37042532)
chr3 (1-156)||(11054269-11054423)
chr3 (1-164)||(30189579-30189745)
chr3 (1-164)||(28875415-28875580)
chr3 (1-164)||(14752158-14752323)
chr3 (1-164)||(47864200-47864365)
chr3 (1-156)||(23311551-23311708)
chr3 (1-164)||(50650987-50651152)
chr3 (1-164)||(35963161-35963326)
chr3 (1-164)||(7866433-7866598)
chr3 (1-164)||(6075090-6075255)
chr3 (1-156)||(37074967-37075126)
chr3 (1-164)||(46711608-46711772)
chr3 (43-164)||(23910463-23910584)
chr3 (1-164)||(579095-579253)
chr3 (3-164)||(29235204-29235361)
chr3 (1-162)||(36546551-36546714)
chr3 (1-162)||(36561601-36561764)
chr3 (1-136)||(6438092-6438229)
chr3 (1-164)||(53270242-53270408)
chr3 (1-164)||(50730118-50730283)
chr3 (1-164)||(50782571-50782736)
chr3 (1-164)||(54464846-54465010)
chr3 (37-165)||(31836966-31837094)
chr3 (55-164)||(9264616-9264725)
chr3 (1-164)||(41476285-41476444)
chr3 (3-164)||(2927300-2927464)
chr3 (1-164)||(8703118-8703279)
chr3 (1-164)||(9055005-9055166)
chr3 (1-148)||(20847235-20847383)
chr3 (8-161)||(19464091-19464248)
chr3 (8-164)||(26208030-26208188)
chr3 (1-156)||(32619787-32619945)
chr3 (40-156)||(26724949-26725065)
chr3 (1-96)||(34722623-34722720)
chr3 (2-164)||(8096968-8097132)
chr3 (39-164)||(47115898-47116023)
chr3 (3-118)||(3972286-3972402)
chr3 (3-118)||(3997476-3997592)
chr3 (40-164)||(8769529-8769651)
chr3 (2-156)||(22479012-22479168)
chr3 (54-162)||(33973518-33973627)
chr3 (60-164)||(10114975-10115079)
chr3 (34-96)||(16033005-16033067)
chr3 (34-96)||(34194926-34194988)
chr3 (60-164)||(10014333-10014437)
chr3 (60-164)||(10252075-10252179)
chr3 (60-164)||(21214305-21214412)
chr3 (34-96)||(46918231-46918293)
chr3 (2-161)||(47443927-47444087)
chr3 (2-164)||(22455958-22456122)
chr3 (2-152)||(30454687-30454838)
chr3 (3-84)||(6752681-6752764)
chr3 (65-165)||(25242127-25242227)
chr3 (2-123)||(38401384-38401507)
chr3 (65-164)||(46557120-46557219)
chr3 (47-164)||(8764629-8764744)
chr3 (3-86)||(47866941-47867026)
chr3 (54-96)||(54725628-54725670)
chr3 (70-158)||(17587779-17587867)
chr3 (46-162)||(51309462-51309578)
chr3 (38-153)||(3084141-3084256)
chr3 (34-93)||(7886638-7886697)
chr3 (3-79)||(38674881-38674959)
chr3 (3-78)||(46557237-46557314)
chr3 (1-59)||(33974614-33974674)
chr3 (62-122)||(6784390-6784450)
chr3 (1-162)||(55400740-55400903)
chr3 (40-95)||(30612221-30612276)
chr3 (55-162)||(31292670-31292777)
chr3 (117-164)||(47866874-47866921)
chr3 (60-162)||(31126275-31126377)
chr3 (100-141)||(2878212-2878253)
chr3 (60-96)||(48291886-48291922)
[»] chr2 (48 HSPs)
chr2 (1-164)||(3201331-3201496)
chr2 (1-164)||(35517128-35517293)
chr2 (1-164)||(6110189-6110356)
chr2 (1-156)||(28599146-28599303)
chr2 (1-164)||(45085262-45085427)
chr2 (1-164)||(19264104-19264270)
chr2 (1-164)||(45660370-45660538)
chr2 (1-164)||(41528261-41528427)
chr2 (1-164)||(11617029-11617194)
chr2 (3-164)||(9864708-9864870)
chr2 (3-165)||(12938249-12938413)
chr2 (5-164)||(24204519-24204680)
chr2 (3-164)||(25572053-25572215)
chr2 (4-161)||(33198624-33198783)
chr2 (3-164)||(6765923-6766087)
chr2 (3-164)||(29524031-29524194)
chr2 (8-136)||(14873975-14874105)
chr2 (1-164)||(28858314-28858482)
chr2 (34-156)||(8701642-8701764)
chr2 (3-162)||(35022904-35023066)
chr2 (34-164)||(35115793-35115924)
chr2 (25-164)||(40808710-40808848)
chr2 (61-164)||(43415468-43415571)
chr2 (39-164)||(7645217-7645342)
chr2 (3-156)||(33677490-33677645)
chr2 (5-156)||(5963210-5963362)
chr2 (3-164)||(44454998-44455159)
chr2 (3-160)||(30830590-30830749)
chr2 (3-116)||(40584436-40584551)
chr2 (2-164)||(26998323-26998487)
chr2 (60-162)||(32010168-32010270)
chr2 (60-165)||(4891627-4891733)
chr2 (55-161)||(4707482-4707585)
chr2 (60-156)||(38071061-38071157)
chr2 (60-122)||(32273737-32273799)
chr2 (40-164)||(32428019-32428144)
chr2 (34-122)||(9709553-9709641)
chr2 (60-120)||(8032702-8032762)
chr2 (71-164)||(11825349-11825438)
chr2 (90-148)||(5280536-5280595)
chr2 (61-96)||(16494984-16495019)
chr2 (1-98)||(30421238-30421337)
chr2 (34-69)||(5280592-5280627)
chr2 (2-122)||(20380129-20380251)
chr2 (67-162)||(33932915-33933010)
chr2 (60-162)||(44803960-44804062)
chr2 (3-76)||(39696877-39696952)
chr2 (61-93)||(44442198-44442230)
[»] scaffold0300 (1 HSPs)
scaffold0300 (1-163)||(565-729)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-164)||(77962-78127)
[»] scaffold0442 (1 HSPs)
scaffold0442 (4-156)||(10053-10207)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-164)||(44762-44927)
[»] scaffold0774 (1 HSPs)
scaffold0774 (4-136)||(3447-3581)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-158)||(154866-155024)
[»] scaffold0009 (2 HSPs)
scaffold0009 (3-156)||(157801-157956)
scaffold0009 (3-164)||(52593-52756)
[»] scaffold0132 (2 HSPs)
scaffold0132 (1-164)||(1017-1182)
scaffold0132 (1-164)||(8977-9142)
[»] scaffold0111 (1 HSPs)
scaffold0111 (3-137)||(40186-40321)
[»] scaffold0565 (1 HSPs)
scaffold0565 (2-164)||(5866-6030)
[»] scaffold0330 (1 HSPs)
scaffold0330 (60-164)||(3234-3338)
[»] scaffold0012 (1 HSPs)
scaffold0012 (3-120)||(160257-160376)
[»] scaffold0010 (1 HSPs)
scaffold0010 (33-164)||(160910-161041)
[»] scaffold0005 (1 HSPs)
scaffold0005 (3-164)||(233478-233641)
[»] scaffold1786 (1 HSPs)
scaffold1786 (40-153)||(893-997)
[»] scaffold1157 (1 HSPs)
scaffold1157 (55-132)||(1690-1767)


Alignment Details
Target: chr4 (Bit Score: 131; Significance: 6e-68; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 47867882 - 47868047
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47867882 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 47867981  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  47867982 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 47868047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20281594 - 20281758
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcatt--ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||| ||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20281594 taaaattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 20281693  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgat 163  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  20281694 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgat 20281758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 2229254 - 2229415
Alignment:
Q  5 attaaatgcaaattatattcaattttcatt--ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    ||||||||||||||| ||||||||||| ||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  2229254 attaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttcca 2229353  T
Q  103 aagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  2229354 aagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 2229415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 4058718 - 4058883
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||  |||||||||||  |||  |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  4058718 taaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctataaaactttt 4058817  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4058818 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgatt 4058883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26916328 - 26916493
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcatt--ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||  ||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  26916328 taaaattaaatgcaaattacattcaattttatttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttt 26916427  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  26916428 ttcaaagaaaacacaaaaaaccatactccaaattcttatgttttagttttcttaataagtgtgatt 26916493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14332763 - 14332928
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||| ||||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  14332763 taaaattaaatgcaaattacattcaattttctctttctttcatttttttcataaccaatggccaataaaaattgtttttacatcttcctataaaactttt 14332862  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||| |||||||    
T  14332863 tccaaagaaaacacaaaaaaccatattccaaattcttatgttttagttttcttaataagtgtgatt 14332928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 20716183 - 20716348
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttc--attctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  20716183 taaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 20716282  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||| ||||  ||||| |||||||||||||||||||||||||| |||||||||||| |||||||    
T  20716283 tccaaacaaaagtcaaaagactatactccaaattcttatgttttagttttcttaataagtgtgatt 20716348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 39078160 - 39078324
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||| |||| ||||||||||| ||||  ||||||||||| ||||  ||||||||||||||||||||||||||||||| ||||||||||||    
T  39078160 taaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatcttc-tataaaactttt 39078258  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  39078259 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 39078324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 7654633 - 7654785
Alignment:
Q  14 aaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaaca 111  Q
    |||||| |||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  7654633 aaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaaca 7654732  T
Q  112 caaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  7654733 caaaaaactatactccaaatttttatgttttagttttcttaataagtgtgatt 7654785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 29203509 - 29203674
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||    
T  29203509 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaatt 29203608  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  29203609 tgcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgatt 29203674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 41414759 - 41414595
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||  |  |||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  41414759 taaaattaaatgcaaattacattcaattttttctctctttcattttttc-ataatcaatagccaataaaaattgtttttacatcttcctataaaactttt 41414661  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  41414660 ttcaaagaaaacacaaaaaactatactccatattcttatgttttagttttcttaataagtgtgatt 41414595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 56318219 - 56318062
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| |||||||||||  |||  |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  56318219 taaaattaaatgtaaattacattcaattttctctctctttcattttttccataaccaatagctaatgaaaattgtttttacatcttcctataaacctttt 56318120  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
     |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  56318119 tccaaagaaaacacaaaaaaccatactctaaattcttatgttttaatttttttaataa 56318062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 55580672 - 55580836
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcatttt-ttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttt 97  Q
    ||||||||||||||||||| ||| || ||||   |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  55580672 taaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatcttcctatacaacttt 55580771  T
Q  98 tcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
    | |||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  55580772 ttccaaagaaaacaaaaaaaactatactccaaattcttatgtttcagttttcttaataaatgtga 55580836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 10069700 - 10069865
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcatt--ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||| | ||||||||||| ||  |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  10069700 taaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 10069799  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      | ||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||| |||||||    
T  10069800 ttcgaagaaaatacaaaaaactatactacaaattcttatgttttagttttattaataagtgtgatt 10069865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 24940368 - 24940533
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| ||| |||||||  |||  |||||||| ||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||    
T  24940368 taaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaactttt 24940467  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  24940468 tccaaagaaaatacaaaaaactatactccaaattcttacgttttagttttcttaataaatgtgatt 24940533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 16604960 - 16604838
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    |||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  16604960 tctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactctaaattc 16604861  T
Q  134 ttatgttttaattttcttaataa 156  Q
    |||||||||| ||||||||||||    
T  16604860 ttatgttttagttttcttaataa 16604838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 17794690 - 17794525
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| |||||||||||  ||| |  || ||||||||||| |||||||||||||||||||||||||||||||||||||||| || |    
T  17794690 taaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaatttat 17794591  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||| |||||||||||||| ||||||||| | ||||| |||||||||||| |||||||    
T  17794590 ttcaaagaaaacgcaaaaaactatacttcaaattctttttttttagttttcttaataagtgtgatt 17794525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 28669149 - 28668985
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||| ||||||| |||||||||||  |||  ||||||||||| ||||  |||| |||||||||||||||||||||| |||||||||||| |||    
T  28669149 taaaattaaatacaaattacattcaattttctctctctttcattttttc-ataactaataaccaatgaaaattgtttttacattttcctataaaaccttt 28669051  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     | ||||||||||||||||||||||||  |||||||||||||||| |||||||||||| |||||||    
T  28669050 tctaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgtgatt 28668985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 35310889 - 35310726
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||| ||||||| ||| |||||||  ||| |  |||||||||||||| ||||||||||||||||||||||||||||||| | || |||||| | |    
T  35310889 aaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctttccatgaaacttattc 35310790  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||| |||||    
T  35310789 taaagaaaacacaaaaaactatgctacaaattcttatgttttagttttcttaataaatatgatt 35310726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 48793773 - 48793614
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    ||||||||||||||||| ||| |||||||  ||||| ||||||| ||||| |||| |||||||||||||||||||||||||||| || |||||| | |||    
T  48793773 aaattaaatgcaaattacatttaattttctctcttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattcca 48793674  T
Q  103 aagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||  |||||||| || |||||||||||| |||| |||||||||||| |||||||    
T  48793673 aagaaaacac--aaaactatgctacaaattcttatgctttagttttcttaataagtgtgatt 48793614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 8683451 - 8683290
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    ||||||||| ||||||| ||| |||||||  ||||| ||||||||||||| |||| ||||||||||||| ||||||||| || | || |||||| | |||    
T  8683451 aaattaaatacaaattacatttaattttctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccatgaaacttattcca 8683352  T
Q  103 aagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||||| || |||||||||||| |||| |||| ||||||| |||||||    
T  8683351 aagaaaacacaaaaaactatgctacaaattcttatgctttagtttttttaataagtgtgatt 8683290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 5483425 - 5483262
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||||||||| |||| |||||||||||  ||| |  |||||| ||||||| || ||||||||||||||||||||||||||||||||| |||||| |      
T  5483425 aaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctattaaacttattt 5483326  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||| |||||| |||||| |||||||||| ||||||||| || |||||||    
T  5483325 taaagaaaacacaaaaaattatacttcaaatttttatgttttagttttcttaacaagtgtgatt 5483262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 42915534 - 42915695
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattc---tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||||| ||| |||||||  ||   |||  |||||||||||| |||| |||||||||||||||||||||||||| | || |||||| |     
T  42915534 aaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctttccatgaaacttatt 42915633  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
    ||||||||||||||||||||||| || ||||||||||| ||||| |||| ||||||| ||||    
T  42915634 ccaaagaaaacacaaaaaactatgctacaaattcttatattttagtttttttaataagtgtg 42915695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 156
Target Start/End: Original strand, 16473828 - 16473908
Alignment:
Q  76 ttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  16473828 ttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatattttagttttcttaataa 16473908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 50080598 - 50080440
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||||||| ||| |  |||||| ||||||| ||||||||||| ||||||| ||||| || |||| ||     || | |    
T  50080598 aaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaaattggttttatattttcccat-----ttatac 50080504  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||    
T  50080503 aaaagaaaacacaaaaaattatactcaaaattcttatgttttagttttcttaataagtgtgatt 50080440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 1585496 - 1585333
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| |||||||||||  ||| |  |||||| ||||||| ||||||||||| ||||||||||| ||||||| | || |||||| |    
T  1585496 taaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttccatgaaacttat 1585397  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||  |||| ||||||||||| |||||||||||| ||||||||| || |||||||    
T  1585396 ttcaaagaaaacac--aaaattatactccaaaatcttatgttttacttttcttaacaagtgtgatt 1585333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 21722776 - 21722666
Alignment:
Q  54 caatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaa 153  Q
    |||||| ||||||||||| |||||||||||||||||||||||| |  ||||||||||| |||| ||||||||  |||||||||||||||| |||| ||||    
T  21722776 caatagtcaatgaaaattatttttacatcttcctataaaacttattacaaagaaaacataaaacactatacttaaaattcttatgttttagttttattaa 21722677  T
Q  154 taaatgtgatt 164  Q
    ||| |||||||    
T  21722676 taagtgtgatt 21722666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 12002782 - 12002617
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    ||||||||||||||||| ||||||| |    |||| || ||| ||||||| |||| |||||| ||||||||||||||||||| | || |||||  | |||    
T  12002782 aaattaaatgcaaattacattcaatatc---tcttccagtttctccataaccaatggccaataaaaattgtttttacatctttccatgaaactaattcca 12002686  T
Q  103 aagaaaa-------cacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    || ||||       |||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  12002685 aaaaaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 12002617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 46070668 - 46070517
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccc 101  Q
    ||||||||||||||| |  ||||||||| |  ||||||||||| || |||| ||| | ||||||||||||||||||||||||||||||||||||| |  |    
T  46070668 aaaattaaatgcaaagtgcattcaatttactctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttc 46070569  T
Q  102 aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaat 154  Q
    ||||| ||||| |||||||||  | |||| |  ||||||||| ||||||||||    
T  46070568 aaagacaacac-aaaaactatgttacaaactactatgttttagttttcttaat 46070517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 32203277 - 32203381
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||||||||||||||| ||||||| ||||||||| |  ||||||||  |||||||||||||||  |||||||||||||||| |||| ||||| | ||    
T  32203277 ccaatgaaaattgtttttatatcttcccataaaacttatttcaaagaaacaacaaaaaactatactttaaattcttatgttttagtttttttaattagtg 32203376  T
Q  160 tgatt 164  Q
    |||||    
T  32203377 tgatt 32203381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 32323349 - 32323246
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgt 160  Q
    |||||||||||||||||||||||||| ||||| ||| |   |||||||||||||||||| ||||| |||||| |||  ||||||||||||||| |||| |    
T  32323349 caatgaaaattgtttttacatcttcccataaatcttattttaaagaaaacacaaaaaacaatacttcaaatttttaaattttaattttcttaacaaattt 32323250  T
Q  161 gatt 164  Q
    ||||    
T  32323249 gatt 32323246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 47516305 - 47516190
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||| || |||| ||| | |||||||||||||||||||| |||||||||||||||| |  |||||| |||||||||||||||| | |||| |     
T  47516305 tctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttcctataaaacttatttcaaagataacacaaaaaactatattacaaacta 47516206  T
Q  134 ttatgttttaattttc 149  Q
     ||||||||| |||||    
T  47516205 ctatgttttacttttc 47516190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 164
Target Start/End: Complemental strand, 5064741 - 5064639
Alignment:
Q  62 aatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
    |||||||||||||||||||||||||| |||||||| |  |||||| ||||||||||| |||  | ||||||  ||||||||| |||||||||||| ||||    
T  5064741 aatgaaaattgtttttacatcttcctttaaaacttatttcaaagataacacaaaaaattatgttacaaattactatgttttagttttcttaataagtgtg 5064642  T
Q  162 att 164  Q
    |||    
T  5064641 att 5064639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 35529675 - 35529760
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatctt 84  Q
    |||||||||||||||||||  |||||||||  |  ||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  35529675 taaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacatctt 35529760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 5815474 - 5815598
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||  ||||| |||||||||||  ||| |  | |||||||||||| |||||| |||| |||||| |||||||||||||  ||||||||| |      
T  5815474 aaattaaatgtcaattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttctcataaaacttattt 5815573  T
Q  101 caaagaaaacacaaaaaactatact 125  Q
    |||||||||||||||||||||||||    
T  5815574 caaagaaaacacaaaaaactatact 5815598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 17186914 - 17186822
Alignment:
Q  29 ttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    |||| ||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||   ||  ||||||||| ||||||||||||    
T  17186914 ttcaatctttcattttttccataaccaatagccaatgaaacttatttttacatcttcctataaaaaaatt-tcaaagaaaatacaaaaaactat 17186822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 19351851 - 19352020
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcat---tctttcattttttccataaacaatagccaatgaaaattgttttt-acatcttcctataaaactttt 98  Q
    ||||||||||||||||| ||||||||||  |   | || |||| ||| |||||  ||||||||||||||||||||||| ||||||||| || |||||| |    
T  19351851 aaattaaatgcaaattacattcaatttttctctctattccattgttttcataactaatagccaatgaaaattgtttttaacatcttcccatgaaacttat 19351950  T
Q  99 cccaaagaaaacac---aaaaaactatactccaa-attcttatgttttaattttcttaataaatgtgatt 164  Q
      ||| ||||||||   |||||||||||||||||  || |||||||||| |||||||||||| |||||||    
T  19351951 ttcaatgaaaacacacaaaaaaactatactccaatttttttatgttttagttttcttaataagtgtgatt 19352020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 158
Target Start/End: Complemental strand, 17799244 - 17799124
Alignment:
Q  38 tcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttat 137  Q
    ||||||| |||||||  |||| ||||||||||||||||||||||||||| ||||||||  | ||||  | ||||| | ||| ||||||||||||| | ||    
T  17799244 tcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaactaattccaagaagaacaccagaaattatactccaaattatcat 17799145  T
Q  138 gttttaattttcttaataaat 158  Q
     ||||| ||||||||||||||    
T  17799144 attttagttttcttaataaat 17799124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 52535734 - 52535589
Alignment:
Q  1 taaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||||||||||||||||||  ||  ||||||| |||||| |||| |||||||||||||||||| ||||||   |||  ||||||| ||||    
T  52535734 taaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattattttta---ctttatataaaaatttt 52535638  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
     | ||||         |||||||||||||||||||||||| |||| ||||||||||||    
T  52535637 tctaaag---------aaaactatactccaaattcttatgctttagttttcttaataa 52535589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 25297369 - 25297204
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttc-attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||||||| |||||| |||||||||||  ||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||| | || |||||| |      
T  25297369 aaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatctttccatgaaacttatta 25297270  T
Q  101 c----aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |    ||| |||||||||||||||| |||| ||||   ||||| ||| |||||||||||| |||||||    
T  25297269 caaaaaaaaaaaacacaaaaaactagactctaaat--gtatgtattacttttcttaataagtgtgatt 25297204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 31280204 - 31280329
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    ||||||||| |||| |  |||||||||||  |||| ||||| | |||||| |||||||||||||||||| |||||||||      ||||||||| | |||    
T  31280204 aaattaaatacaaactgcattcaattttctctcttccatttct-ccataa-caatagccaatgaaaattatttttacat------ataaaacttattcca 31280295  T
Q  103 aagaaaacacaaaaaactatactccaaattctta 136  Q
    |||||||||||||||||||||||| |||||||||    
T  31280296 aagaaaacacaaaaaactatactctaaattctta 31280329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 32280111 - 32280009
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgt 139  Q
    ||||| ||||||| ||||||||||| |||||||||||||||| |    || |||| | | | ||||||||||||||||| ||||||||||||||||||||    
T  32280111 attttctccataatcaatagccaattaaaattgtttttacatatcttcatcaaacctattctaaagaaaacacaaaaaattatactccaaattcttatgt 32280012  T
Q  140 ttt 142  Q
    |||    
T  32280011 ttt 32280009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 14583734 - 14583897
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||| ||| ||| |  |||||| |   ||| | ||||||||||||||| ||||||||||||||| || |||||| |      
T  14583734 aaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaat-gtttttacatcttcccatgaaacttattt 14583832  T
Q  101 caaagaaaa-cacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||| |||||| |||||||    |||||||||| ||||| ||||||||||||||||||||    
T  14583833 taaagaaaaacacaaataactatatattaaattcttatattttagttttcttaataaatgtgatt 14583897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 5841893 - 5841805
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    |||||||||||||| |||| ||||| |||||||||||| ||||||||||||||||||||| || |  ||| || ||||||| |||||||    
T  5841893 tctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaatttatttcaaggataacacaagaaactat 5841805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 50145774 - 50145865
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactc 126  Q
    |||| |||||| ||||| | |||||||||||||||||||| |||||||||||| ||||||||| | |||||| ||||||||| || |||||||    
T  50145774 tcttccattttctccattatcaatagccaatgaaaattgtgtttacatcttcccataaaacttattccaaag-aaacacaaacaattatactc 50145865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 32410393 - 32410496
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgt 160  Q
    ||||||||||| |||||||||||||||||||||||| |  |||||| ||||||||||||| || |  ||| |  |||||| || |||||||||||| |||    
T  32410393 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaaactttattataaactactatgttgtagttttcttaataagtgt 32410492  T
Q  161 gatt 164  Q
    ||||    
T  32410493 gatt 32410496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 8013203 - 8013073
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||| || || |  |||| ||||| ||||||||||||||||||| |||| |||||| |  ||| || ||||||| |||||||  | |||| |     
T  8013203 tctttcattttctctatgactaataaccaataaaaattgtttttacatctttctatgaaacttatttcaaggataacacaagaaactatgttacaaacta 8013104  T
Q  134 ttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||| ||||||||||||||||||||    
T  8013103 ctatgttttagttttcttaataaatgtgatt 8013073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 29511490 - 29511551
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    |||||||||||||||||||||||||||||||||||| |   ||||| |||||||||||||||    
T  29511490 caatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaactat 29511551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 30012074 - 30011913
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||||  |||||||||    | ||| ||||| |||||||  | || ||||||| ||||||||||||||||| | || |||||| | |    
T  30012074 taaaattaaatgcaaattgcattcaatttgttcttttttattttctccataataattaaccaatgataattgtttttacatctttccatgaaacttattc 30011975  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
    |||| | ||||||||||| |||||  ||||||   || |||||| ||||||||||| |||||    
T  30011974 caaaaataacacaaaaaattatacctcaaattacaatattttaactttcttaataagtgtga 30011913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 164
Target Start/End: Complemental strand, 28142710 - 28142606
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||||||||||||||||||| ||||||||||||| |   ||||| ||||||||||| |||  | |||| | | || ||||| |||||||||||| ||    
T  28142710 ccaatgaaaattgtttttacatcctcctataaaacttattttaaagataacacaaaaaattatgttacaaactatcatattttagttttcttaataagtg 28142611  T
Q  160 tgatt 164  Q
    |||||    
T  28142610 tgatt 28142606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 8178387 - 8178265
Alignment:
Q  2 aaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  |||||||||  ||  ||||||||||| || |||| ||||| |||||  ||||||||||||||||||| |||||||||| |     
T  8178387 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaacttatt 8178288  T
Q  100 ccaaagaaaacacaaaaaactat 122  Q
     |||||| ||||||  |||||||    
T  8178287 tcaaagataacacatgaaactat 8178265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 7438760 - 7438810
Alignment:
Q  108 aacacaaaaaactatactccaaattcttatgttttaattttcttaataaat 158  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||||||||    
T  7438760 aacaccaaaaactatactccaaattattatgttttagttttcttaataaat 7438810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 49080321 - 49080379
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaa 118  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||| || ||||||||    
T  49080321 ccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataagacaaaaaa 49080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 23978263 - 23978169
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaac 94  Q
    ||||||||||||||| |  ||||||||| |  |||||  |||||| || |||| |||   |||||||||||||||||||||||||||||||||||    
T  23978263 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 28318505 - 28318445
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    |||||||||||||||||||||||||||||||||  || |  |||||| |||||||||||||||    
T  28318505 ccaatgaaaattgtttttacatcttcctataaa--ttatttcaaagataacacaaaaaactat 28318445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 29899774 - 29899876
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||| |||| |||||||||||| | ||||||||| | |||| || ||||||||||| |||||  |||||   || || ||| |||||||||||||||    
T  29899774 ccaatgagaattatttttacatctttccataaaacttattccaaggagaacacaaaaaattatacctcaaatcactacgtgttagttttcttaataaatg 29899873  T
Q  160 tga 162  Q
    |||    
T  29899874 tga 29899876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 37911948 - 37912010
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    |||||||||||||||||||||| || ||||||||||| |   ||||| |||||||||||||||    
T  37911948 ccaatgaaaattgtttttacatatttctataaaacttattttaaagataacacaaaaaactat 37912010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 53848518 - 53848628
Alignment:
Q  54 caatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaa 153  Q
    ||||| ||||| |||||||||||||| ||||||||||||| || |  ||| || ||||||| |||||||  | |||| |  ||||||||  |||||||||    
T  53848518 caataaccaattaaaattgtttttacgtcttcctataaaaattatttcaaggataacacaagaaactatgttgcaaactactatgtttttgttttcttaa 53848617  T
Q  154 taaatgtgatt 164  Q
    ||| |||||||    
T  53848618 taagtgtgatt 53848628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 31532496 - 31532444
Alignment:
Q  105 gaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaa 157  Q
    ||||||| |||||||||||||| ||||| | |||||||| |||||||||||||    
T  31532496 gaaaacataaaaaactatactctaaattgtaatgttttagttttcttaataaa 31532444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 4443126 - 4443084
Alignment:
Q  121 atactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  4443126 atactgcaaattcttatgttt-aattttcttaataaatgtgatt 4443084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 50768504 - 50768567
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactata 123  Q
    |||||||||||| |||||||||||| | || |||||| | |||| |||||||||||||| ||||    
T  50768504 ccaatgaaaattatttttacatctttccatgaaacttattccaaggaaaacacaaaaaattata 50768567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 29180473 - 29180371
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||| |||| |||||||||||| |||| |||||| | |||| || ||||||||||| |||||  |||||   || || ||| |||||||||||| ||    
T  29180473 ccaatgagaattatttttacatctttctatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtg 29180374  T
Q  160 tga 162  Q
    |||    
T  29180373 tga 29180371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 94
Target Start/End: Original strand, 40411165 - 40411199
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaac 94  Q
    ||||| |||||||||||||||||||||||||||||    
T  40411165 ccaataaaaattgtttttacatcttcctataaaac 40411199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 40553809 - 40553935
Alignment:
Q  36 tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacac----aaaaaactatactccaaat 131  Q
    ||||| ||| |||||||  |||| ||||||||| ||||||||||||||| |||| |||||| | | || || |||||    || |||||||||| ||||     
T  40553809 tttcactttctccataactaataaccaatgaaacttgtttttacatctttctatgaaacttattctaaggataacacaagaaagaaactatactgcaaac 40553908  T
Q  132 tcttatgttttaattttcttaataaat 158  Q
    |  ||||||||| |||||||| |||||    
T  40553909 tactatgttttagttttcttagtaaat 40553935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 25268523 - 25268631
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgt 139  Q
    ||||| ||||||| ||||| |||||||||||| ||||||  ||||| | | |||||| |  |||  | ||||||||||  ||||| ||||||| |||| |    
T  25268523 attttctccataaccaataaccaatgaaaattatttttatttcttcttgtgaaacttatttcaagtagaacacaaaaagatataccccaaattattatat 25268622  T
Q  140 tttaatttt 148  Q
    |||||||||    
T  25268623 tttaatttt 25268631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 9e-67; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 2126045 - 2126208
Alignment:
Q  3 aaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  2126045 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 2126144  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  2126145 caaagaaaacacaaaaaactatattccaaattcttatgttttagttttcttaataaatgtgatt 2126208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 33369558 - 33369720
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| |    
T  33369558 taaaattaaatgcaaattacattcaattttctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc-tcatataaaactttttc 33369656  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  33369657 caaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgatt 33369720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 15959796 - 15959631
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15959796 taaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 15959697  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  15959696 ttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataaatgtgatt 15959631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 24190475 - 24190639
Alignment:
Q  1 taaaattaaatgcaaattatattcaattt-tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||||||| ||| | ||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||     
T  24190475 taaaattaaatgcaaattacattaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccgtataaaacttttt 24190574  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  24190575 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 24190639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 13136707 - 13136545
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||  ||||      
T  13136707 taaaattaaatgcaaattatattcaattttctctctttcattttttccataaccaatagccaatggaaattgtttttacatcttcctat-aatttttttt 13136609  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13136608 taaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataagtgtgatt 13136545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 6786843 - 6787008
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||||| || |||||||||||| |||  |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||    
T  6786843 taaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttcatataaaactttt 6786942  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||    
T  6786943 tccaaagaaaacacaaaaaactatactccaaattctcatgttttagttttcttaataagtgtgatt 6787008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 32624161 - 32623996
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  32624161 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttt 32624062  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  32624061 ttcaaagaaaacacaaaaaactacactccaaattcttatgttttagttttcttaataattgtgatt 32623996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 39555742 - 39555577
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||| |||  |||  |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  39555742 taaaattaaatgcaaattacattcaatgttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 39555643  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  39555642 ttcaaagaaaacacaaaaacctatactccaaattcttatgttttaattttcttaataagtgtgatt 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43667457 - 43667294
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||||||||| |||||| |||||||||||  ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||      
T  43667457 taaaattaaatgtaaattacattcaattttctctctttcattttttccataaccaatggccaatgaaaattgtttttacgtcttcctataaaactttttt 43667358  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||| ||||||  |||||||||||| ||||||||||||||||||||||||    
T  43667357 caaagaaaacacaaaaaattatactttaaattcttatgtcttaattttcttaataaatgtgatt 43667294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 11241073 - 11241197
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgt 139  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11241073 attttttccataaccaatagccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 11241172  T
Q  140 tttaattttcttaataaatgtgatt 164  Q
    ||||||||| ||||||| |||||||    
T  11241173 tttaatttttttaataagtgtgatt 11241197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 12449123 - 12448969
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  || ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  12449123 taaaattaaatgcaaattacattcaattttctctctctttgattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttt 12449024  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaat 154  Q
      ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12449023 ttcaaagaaaacacaaaaaactatactccaaattcttat-ttttaattttcttaat 12448969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6785461 - 6785622
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||||| || |||||||||||  |||  |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  6785461 taaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcatataaaactttt 6785560  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
     | |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  6785561 tcaaaagaaaacacaaaaaactatactcc-aattcttatgttttagttttcttaataagtgtg 6785622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 28016900 - 28016737
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||| ||| |||||||||||  ||||| |||||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||      
T  28016900 taaaattaaatgcaagttacattcaattttctctcttttattttttttataaccaatagccaatgaaaattgtttttacatcttcctataaaacattttt 28016801  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  28016800 caaagaaaacaccaaaaactatactctaaattcttatgttttagttttcttaataagtgtgatt 28016737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 35691397 - 35691562
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcatttt-ttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttt 97  Q
    ||||||||||||||||||| |||||||||||   |||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  35691397 taaaattaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctccctataaaacttt 35691496  T
Q  98 tcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |  |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||    
T  35691497 tttcaaagaaaacacaaaaaattatactccaaattcttatgtttt-agtttcttaataaatgtgatt 35691562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 32983326 - 32983163
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||||||||||||||||||||  |||  |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  32983326 taaaattaaatgcaaattatattcaattttctctctctttcattttttccataaccaat-gccaatgaaaattgtttttacatcttcttataaaactttt 32983228  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    || |||||||||||||||||||||||| | |||| |||||||||| |||||||||||| |||||||    
T  32983227 cc-aaagaaaacacaaaaaactatacttccaatttttatgttttagttttcttaataagtgtgatt 32983163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45226143 - 45226308
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttc-at-tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  45226143 taaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctataaaactttt 45226242  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||| |||||||    
T  45226243 ttcaaagaaaatacataaaactatactctaaattattatgttttagttttcttaataagtgtgatt 45226308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 40718683 - 40718848
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   ||||||||||||||| || | |||||||||||||||||||||| |||| |||| ||||||||||||    
T  40718683 taaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctacaacttcatataaaactttt 40718782  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||||||||||||||||| |||| ||||| ||||| |||||| |||||||    
T  40718783 ttcaaagaaaacacaaaaaactatactccaaatttttatattttagttttcgtaataagtgtgatt 40718848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 42965970 - 42965815
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  42965970 taaaattaaatgcaaattacattcaattttctctctctttcattttt-ccataaccaatagccaatgaaaattgtttttacatcttcctataaaa-tttt 42965873  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
     |||||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||    
T  42965872 tccaaagaaaacacaaaaaactaaacttcaaatttttatgttttagttttcttaataa 42965815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 46542989 - 46543152
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||||  ||| |||||||  ||||||||||| |||| || |||||||||||| ||||||||||| ||||||||||||||  ||||      
T  46542989 taaaattaaatgcaaattgcatttaattttctctctttcattttctccacaaccaatagccaatggaaattgttttttcatcttcctataaatttttttt 46543088  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| |||||    
T  46543089 caaagaaaacacaaaaaactatactccaaatttttatgttttagtttttttaataaatatgatt 46543152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 47600195 - 47600030
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaac-ttt 97  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  47600195 taaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 47600096  T
Q  98 tcccaaaga--aaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
    |    ||||  | ||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  47600095 tttttaagattacacaaaaaaaactatactctaaattcttatgttttaatttttttaataaatgtg 47600030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 7468119 - 7467961
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttc-at-tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||  | ||| |||||||||||||||||||| ||||||||||||| ||||||||||    
T  7468119 taaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatcttcctttaaaactttt 7468020  T
Q  99 cccaaagaaaacacaaaaaacta-tactccaaattcttatgttttaattttcttaataa 156  Q
     ||||||||||||||||||| || |||| ||||||||||||||||| ||||||||||||    
T  7468019 tccaaagaaaacacaaaaaattattacttcaaattcttatgttttagttttcttaataa 7467961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 3076302 - 3076465
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattc--tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||| |||||||  ||  ||| ||||||||||||| |||| ||||||||||||| |||||||||||||| ||||||||| | |    
T  3076302 aaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccataaaacttattc 3076401  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||| ||||||||||||||||| || |||||||||||| ||||||||||||||||| |||||||    
T  3076402 caaataaaacacaaaaaactatgctacaaattcttatgctttaattttcttaataagtgtgatt 3076465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28120911 - 28120748
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |  |    
T  28120911 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcccataaaattcat 28120812  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
       ||| ||||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||    
T  28120811 tttaaaaaaaacacaaaaaactatactccacattcttatttcttagttttcttaataaatgtga 28120748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 3861849 - 3861699
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||||||||| ||||||  | |||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||||| | |    
T  3861849 taaaattaaatgcaaattatatttaatttttctcctttcatttttttcataatcaatagccaatgaaaattgtttttacatctttcaataaaacttattc 3861750  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttctt 151  Q
     |||||||||| |||||| |||||| |||||| |||||||||| |||||||    
T  3861749 taaagaaaacataaaaaattatacttcaaattattatgttttagttttctt 3861699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 44148986 - 44148827
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    |||||||||||||||||  || |||||||  ||||  ||||||||||||| |||| |||||||||||||||||||||||||||| || |||||| | |||    
T  44148986 aaattaaatgcaaattacgtttaattttctctctt--attttttccataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattcca 44148889  T
Q  103 aagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||||| || |||||||||||| |||| ||||| |||||| |||||||    
T  44148888 aagaaaacacaaaaaactatgctacaaattcttatgctttagttttcgtaataagtgtgatt 44148827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 24728781 - 24728617
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||| |||||||  |||  || ||||||||||||| |||| |||||||||||||||||||||||||||| || |||||| | |    
T  24728781 aaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccatgaaacttattc 24728682  T
Q  101 caaagaaaacacaa-aaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||| |||||||| || ||||||||||||||||| |||||||||||| |||||||    
T  24728681 gaaagaaaacacaaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtgatt 24728617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 52984979 - 52985103
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgt 139  Q
    ||||| ||| ||| |||||||||||||||||||||||||||||||||  | |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  52984979 attttatccctaatcaatagccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactatactccaaattcttatgt 52985078  T
Q  140 tttaattttcttaataaatgtgatt 164  Q
     ||| |||||||||||| |||||||    
T  52985079 attagttttcttaataagtgtgatt 52985103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 1820420 - 1820577
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||  |  ||||||||||||| ||||| ||| ||| |||||| ||| ||||||||||||||||||||||||||    
T  1820420 taaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaaaagctaatgaatatt-tttttacatcttcctataaaactttt 1820518  T
Q  99 cccaaagaaaacacaa-aaaactatactccaaattcttatgttttaattttcttaataa 156  Q
     ||||| ||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  1820519 tccaaaaaaagcacaataaaactatattccaaattcttatgttttagttttcttaataa 1820577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 33431566 - 33431729
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||| |||| ||||||| ||| |||||||  ||||||||||| || |||| |||||||||||||||||||||||| |||| |||||||||||||||      
T  33431566 taaaatgaaatacaaattacatttaattttctctctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcctataaaactttttt 33431665  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||| ||||||||||||||||| || |||||||||||| | || |||||||||||| |||||||    
T  33431666 aaaaaaaaacacaaaaaactatgctacaaattcttatgatctagttttcttaataagtgtgatt 33431729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3875177 - 3875010
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaata----gccaatgaaaattgtttttacatcttcctataaaac 94  Q
    ||||||||||||||||||  |||||||||||  |||  |||||||||||||||| |||||    |||||| |||||||||||||||| ||||||||||||    
T  3875177 taaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttacatattcctataaaac 3875078  T
Q  95 ttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||| | ||| |||||||  ||||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  3875077 tttttcaaaaaaaaacac--aaaactatacttcaaattcttatgttttacttttcttaataagtgtgatt 3875010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 37735537 - 37735395
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||||||  |||||  |||||| ||||||| ||||||||||| |||||||||||||| |||||| || |||||| | |    
T  37735537 aaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcccatgaaacttattc 37735438  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgtttta 143  Q
    ||||||||| ||||||||||||||| || ||||||||||||||    
T  37735437 caaagaaaatacaaaaaactatacttcagattcttatgtttta 37735395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 46818658 - 46818492
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattc--tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||| |||||||  |||| |||||  ||  ||||||||| |||||||  | |||||||||||||||||||||| |||||||||||||||||||    
T  46818658 taaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttttatatcttcctataaaactttt 46818559  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatta 165  Q
      ||||||||| |||||||||||||||  |||||||||||||||  |||||||||||| ||| ||||    
T  46818558 ttcaaagaaaatacaaaaaactatactttaaattcttatgtttttcttttcttaataagtgtaatta 46818492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 39932728 - 39932576
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||| ||||||| |||||||||||  |||  || ||||| ||||| | ||||||||||| ||||||||||||| |||||| |||||||||| |    
T  39932728 taaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttcttataaaacttat 39932629  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttctt 151  Q
       ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  39932628 taaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttctt 39932576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 47014612 - 47014487
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||  ||| |||||||||||||||  ||||||| ||||    
T  47014612 tctttcattttttccataaccaatagtcaatgaaaattgtttttacattttcctataaaacttttttcaacgaaaacacaaaaaac--tactccagattc 47014515  T
Q  134 ttatgttttaattttcttaataaatgtg 161  Q
    |||||||||| ||| |||| ||| ||||    
T  47014514 ttatgttttagtttacttagtaagtgtg 47014487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 1034917 - 1035025
Alignment:
Q  54 caatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaa 153  Q
    |||||| | |||||||||||||||| ||||||  ||||||||| | ||||||||||||||||| |  |||| ||||||||||||||||||||||||||||    
T  1034917 caatagtcgatgaaaattgtttttatatcttctcataaaacttattccaaagaaaacacaaaaca--atacgccaaattcttatgttttaattttcttaa 1035014  T
Q  154 taaatgtgatt 164  Q
    |||||||||||    
T  1035015 taaatgtgatt 1035025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 32742324 - 32742193
Alignment:
Q  33 ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaatt 132  Q
    |||||||||||||||||||| ||||    ||||||||||||||||| || ||  ||||||||||||   ||||||||||||||||||||||||| |||||    
T  32742324 ttctttcattttttccataatcaatgattaatgaaaattgtttttatatttttttataaaactttttttaaagaaaacacaaaaaactatactcaaaatt 32742225  T
Q  133 cttatgttttaattttcttaataaatgtgatt 164  Q
    |||||| |||| |||| ||||||| |||||||    
T  32742224 cttatgctttagtttttttaataagtgtgatt 32742193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 30221771 - 30221885
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgt 139  Q
    ||||| ||||||| ||||| ||||| |||| |||||||||||||||| ||||||||| |   ||||||||||||||||| |||| ||||| |||||||||    
T  30221771 attttctccataaccaatatccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacacaaaaaattatattccaagttcttatgt 30221870  T
Q  140 tttaattttcttaat 154  Q
    |||||||||||||||    
T  30221871 tttaattttcttaat 30221885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 43765301 - 43765438
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||| |||||||||| ||||||||||| |||| |  |||||| | |||||  |||| |||||||||| |||||||||||||||||||||||||| | |    
T  43765301 aaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctataaaacttattc 43765400  T
Q  101 caaagaaaacac-aaaaaactatactccaaattcttat 137  Q
     ||||||||||| ||||||||||||| |||||| ||||    
T  43765401 taaagaaaacacaaaaaaactatactacaaatttttat 43765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 2246170 - 2246026
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| |||||||  ||| |  || |||  ||| ||  ||||||||||||||||| ||||||||| |||||||||||||| |    
T  2246170 taaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatattcctataaaacttat 2246071  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgtttta 143  Q
      |||||||||||||||||||||||||| ||||| | ||||||||    
T  2246070 ttcaaagaaaacacaaaaaactatactctaaattttaatgtttta 2246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 25391689 - 25391824
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcat-tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||||||| |||||||||| || |||| || || | ||||||  | ||||||||||||||||||||||||| ||| |||||||||| |     
T  25391689 taaaattaaatgcaaattacattcaatttttatctcttccacttct-ccataactattagccaatgaaaattgtttttacattttcatataaaacttat- 25391786  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttat 137  Q
    | ||||||||||||||||| |||||| |||||||||||    
T  25391787 ctaaagaaaacacaaaaaattatacttcaaattcttat 25391824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6787145 - 6787050
Alignment:
Q  1 taaaattaaatgcaaattatattcaattt-tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaact 95  Q
    ||||| |||||||||| || ||||||||| ||  ||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  6787145 taaaaataaatgcaaactacattcaatttctctctctttcattttttccataaccaatagccaataaaaattatttttacatcttcctataaaact 6787050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 7876091 - 7875931
Alignment:
Q  8 aaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt----ttccc 101  Q
    |||||||||||| |||||||||||  |||  || ||||||||||||| |||||| |||| |||||| |||||||||||| ||||||||       |||      
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctataaaaaaaaaaattc-- 7875994  T
Q  102 aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||||||| | |||||| |||| |||||||||||||||||| |||||||    
T  7875993 aaagaaaacacaaaaaactataattcaaatttttatattttaattttcttaataagtgtgatt 7875931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 10558910 - 10558796
Alignment:
Q  3 aaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||||||| |||||| ||| ||||||  |  |||| |||||| ||||||| ||||||||||||||||||||||||||||||||| |||||| || | |    
T  10558910 aaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccataaaaattattc 10558811  T
Q  101 caaagaaaacacaaa 115  Q
    |||||||||||||||    
T  10558810 caaagaaaacacaaa 10558796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 164
Target Start/End: Complemental strand, 32318677 - 32318551
Alignment:
Q  38 tcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt-ttcccaaagaaaacacaaaaaactatactccaaattctta 136  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||   ||| |||| | |||||| ||||||||||||| |||    
T  32318677 tcattttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaacttatttaaaaacaaaaaagaaaaaattatactccaaattttta 32318578  T
Q  137 tgttttaattttcttaataaatgtgatt 164  Q
    | |||||||||| ||||||| |||||||    
T  32318577 tattttaatttt-ttaataattgtgatt 32318551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 47303060 - 47302903
Alignment:
Q  3 aaattaaatgcaaattatattcaattttca---ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||||| ||||| |||||    || ||||||||| | ||||| ||||||||||||||||||  |||||||||||||||| |||||| |     
T  47303060 aaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaaaatt-attttacatcttcctatgaaacttatt 47302962  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgt 160  Q
    || || |||||||  |||| |||||||||| ||||||| ||||| ||||||||| ||||||    
T  47302961 cctaaaaaaacac--aaaattatactccaatttcttatattttagttttcttaacaaatgt 47302903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16854145 - 16854244
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| ||||||  |  ||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||| |||||||||||    
T  16854145 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttccaataaaactttt 16854244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 50176588 - 50176692
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||| |||||||||||||||||||||||||||| || |  |||||| |||||||||||||||  | |||| |  ||||||||| |||||||||||||||    
T  50176588 ccaataaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataaatg 50176687  T
Q  160 tgatt 164  Q
    |||||    
T  50176688 tgatt 50176692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 33 - 164
Target Start/End: Original strand, 16688175 - 16688306
Alignment:
Q  33 ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaatt 132  Q
    |||||||||||| || |||| ||| | ||||||||||||||||||||||||||||||||||||| |  |||| | |||| ||||||||||  | |||| |    
T  16688175 ttctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaaaataacataaaaaactatgttacaaact 16688274  T
Q  133 cttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||  |||||| |||||||    
T  16688275 actatgttttaatttttctaataagtgtgatt 16688306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 4672924 - 4672998
Alignment:
Q  87 tataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  4672924 tataaaacttttttcaaagaaaatacaaaaaactatactccaaattcttatattttagttttcttaataagtgtg 4672998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 37538849 - 37538979
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||| || |||| ||| | |||||||||||||| |||||||||||||||||||||| |  ||| || ||||||| |||||||  | |||| |     
T  37538849 tctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaacta 37538948  T
Q  134 ttatgttttaattttcttaataaatgtgatt 164  Q
     ||| |||||||||||||||||| |||||||    
T  37538949 ctatattttaattttcttaataagtgtgatt 37538979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 7397712 - 7397876
Alignment:
Q  2 aaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  |||||||||  || || ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||| || |     
T  7397712 aaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaatttatt 7397811  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||| |||||||||||||||  | |||| |  ||| ||||| |||| ||||||| |||||||    
T  7397812 tcaaagataacacaaaaaactatgttacaaactactatattttagtttttttaataagtgtgatt 7397876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 45840220 - 45840057
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  |||||  ||||||||| |||| |||   |||||||||||||||||| |||||||||||||||| | |     
T  45840220 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttttctataatcaactaccaatgaaaattgttttt-catcttcctataaaacatatt 45840122  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||| | |||||||||||||||  | |||| | |||||||||| |||||||||||| |||||||    
T  45840121 tcaaaaataacacaaaaaactatgttacaaactattatgttttagttttcttaataagtgtgatt 45840057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 5950479 - 5950567
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||||| |  ||| || ||||||| |||||||    
T  5950479 tctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaagaaactat 5950567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 50370002 - 50370120
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    |||||||||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||             |||||||| ||||| |||||||    
T  50370002 tctttcattttttc-ataaccaatagccaatagaaattgtttttacatcttcctataaaactttt-----------ttcaaaaaacaatacttcaaattc 50370089  T
Q  134 ttatgttttaattttcttaataaatgtgatt 164  Q
    |||| |||||||||| |||||||||||||||    
T  50370090 ttatattttaatttttttaataaatgtgatt 50370120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 5858526 - 5858404
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  |||  |||||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||| |     
T  5858526 aaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatt 5858427  T
Q  100 ccaaagaaaacacaaaaaactat 122  Q
     ||| || ||||||| |||||||    
T  5858426 tcaaggataacacaagaaactat 5858404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 298791 - 298659
Alignment:
Q  33 ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaat- 131  Q
    ||||| |||||| ||||||| ||||||||||| |||||  |||||||||||||| || |||||| | | ||||||||||||  |||||||||| ||| |     
T  298791 ttcttccattttctccataatcaatagccaattaaaataatttttacatcttcccat-aaacttattctaaagaaaacacatcaaactatacttcaagtt 298693  T
Q  132 -tcttatgttttaattttcttaataaatgtgatt 164  Q
     | |||||||||| |||||||||||||| |||||    
T  298692 attttatgttttagttttcttaataaatatgatt 298659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 23392319 - 23392211
Alignment:
Q  3 aaattaaatgcaaattatattcaattt-tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccc 101  Q
    ||||||||||||||||| ||| | ||| || ||||| |||||| ||||||| |||||| ||||||||||| |||||| || || ||||||||||| | ||    
T  23392319 aaattaaatgcaaattacattaattttctctttcttccattttctccataaccaatagtcaatgaaaattatttttatatttttctataaaacttattcc 23392220  T
Q  102 aaagaaaac 110  Q
    |||||||||    
T  23392219 aaagaaaac 23392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 50012596 - 50012749
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||| ||||  || |||||||| ||||  |||| |||||||||||| |||||| || ||||||| ||          
T  50012596 taaaattaaatgcaaattacattcaattttctttctcttttattttttctataactaata-ccaatgaaaattatttttatatattcctatgaa------ 50012688  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaa-ttttcttaataaatgtgatt 164  Q
          ||||||||||||||||||||||||||||| ||| |||||| |||| ||||||| |||||||    
T  50012689 ------gaaaacacaaaaaactatactccaaattcctatattttaattttttttaataagtgtgatt 50012749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 8889798 - 8889729
Alignment:
Q  54 caatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactata 123  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |  ||| || ||||||| ||||||||    
T  8889798 caataaccaatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaataaactata 8889729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 14086966 - 14087030
Alignment:
Q  10 atgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtt 74  Q
    |||||||||| |||||||||||  ||||| |||||||||||||  ||||||||||||||||||||    
T  14086966 atgcaaattacattcaattttctctcttttattttttccataactaatagccaatgaaaattgtt 14087030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 164
Target Start/End: Complemental strand, 30701480 - 30701376
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||||||||| |||| ||||||||||||||||||| |  |||||| ||||||||||| |||  | |||| |  ||||||||| |||| ||||||| ||    
T  30701480 ccaatgaaaattattttcacatcttcctataaaacttatttcaaagataacacaaaaaattatgttacaaactactatgttttagtttttttaataagtg 30701381  T
Q  160 tgatt 164  Q
    |||||    
T  30701380 tgatt 30701376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 36383929 - 36384092
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattc--tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||  |||||||||   |||  ||| ||||| |||||||  | |||||||||| ||||||||||| ||||| | || ||| || |    
T  36383929 taaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataataattagccaatgataattgtttttatatctttccatgaaatttat 36384028  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
     ||||| | ||||||||||| ||||   |||||| | ||||||||| ||||||||||| |||||    
T  36384029 tccaaaaataacacaaaaaattatatctcaaattataatgttttaactttcttaataagtgtga 36384092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 52841545 - 52841438
Alignment:
Q  55 aatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaat 154  Q
    |||| ||||||||||||||||| ||||||| |||| |||||| |   || || || |||| |||||||||| |||| | || ||||||| ||||||||||    
T  52841545 aataaccaatgaaaattgttttaacatctttctatgaaacttattttaaggataagacaagaaactatactacaaactattgtgttttagttttcttaat 52841446  T
Q  155 aaatgtga 162  Q
    ||||||||    
T  52841445 aaatgtga 52841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 13351746 - 13351784
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13351746 ccaatgaaaattgtttttacatcttcctataaaactttt 13351784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 25185459 - 25185302
Alignment:
Q  2 aaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  |||||||||  ||  | ||||||||| || |||| |||   ||||||||| ||||||| ||||||||||||||||||| |     
T  25185459 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactaccaatgaaagttgttttcacatcttcctataaaacttatt 25185360  T
Q  100 ccaaagaaaacacaa-aaaactatactccaaattcttatgttttaattttcttaataa 156  Q
     |||||| ||||||| ||||||||  | |||| |  ||||||||| ||||||||||||    
T  25185359 tcaaagataacacaaaaaaactatgttacaaactactatgttttagttttcttaataa 25185302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 15912265 - 15912300
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  15912265 caatgaaaattgtttttacatcttcctataaaactt 15912300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 35366309 - 35366202
Alignment:
Q  49 ataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaatttt 148  Q
    |||| ||||| ||||| ||||||||||||||||||| |||||||| || |  ||| || ||||||| |||||||  | |||| |  ||||||||| ||||    
T  35366309 ataaccaataaccaattaaaattgtttttacatctttctataaaatttatttcaacgataacacaagaaactatgttgcaaactactatgttttagtttt 35366210  T
Q  149 cttaataa 156  Q
    ||||||||    
T  35366209 cttaataa 35366202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 44510374 - 44510252
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattc--tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  ||  ||||||||| || |||| ||||   |||||||||||||||||||| |||||||||||| || |     
T  44510374 aaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaaaattgtttttacaacttcctataaaatttatt 44510275  T
Q  100 ccaaagaaaacacaaaaaactat 122  Q
     |||| | |||||||||||||||    
T  44510274 tcaaaaataacacaaaaaactat 44510252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 25990810 - 25990914
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||||||||| ||||||||| || | || |||||| | |||| || ||||||||||| |||||  |||||   || || ||| |||||||||||||||    
T  25990810 ccaatgaaaattatttttacatatttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataaatg 25990909  T
Q  160 tgatt 164  Q
    |||||    
T  25990910 tgatt 25990914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 46949322 - 46949485
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattc--tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||||||| ||||||||||    ||  ||| ||||| |||||||    || |||||||||||| |||||||||||| | || |||||| |    
T  46949322 taaaattaaatgcaaattgtattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 46949421  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
     |||| || ||||||||||| ||||   |||||   || || ||| ||||||||||||||||||    
T  46949422 tccaaggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataaatgtga 46949485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 23873925 - 23873823
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||||||||| |||||||||||| | || |||||| | |||| || ||||||||||| |||||  |||||   || || ||| |||||||||||| ||    
T  23873925 ccaatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtg 23873826  T
Q  160 tga 162  Q
    |||    
T  23873825 tga 23873823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 35884273 - 35884375
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||||||||| |||||||||||| | |||||| || |  |||| | ||||||||||| |||||  ||||||  || |  ||| |||||||||||||||    
T  35884273 ccaatgaaaattatttttacatctttccataaaatttatttcaaaaagaacacaaaaaattatacctcaaattactaagagttagttttcttaataaatg 35884372  T
Q  160 tga 162  Q
    |||    
T  35884373 tga 35884375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 38942539 - 38942437
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||||||||| |||||||||||| | || |||||| | |||| || ||||||||||| |||||  |||||   || || ||| |||||||||||| ||    
T  38942539 ccaatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtg 38942440  T
Q  160 tga 162  Q
    |||    
T  38942439 tga 38942437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 41063747 - 41063840
Alignment:
Q  2 aaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaa 93  Q
    ||||||||||||||| |  |||||||||  ||  ||||| ||||| || ||||  |||| |||||||||||| |||||||||||| ||||||||    
T  41063747 aaaattaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttacatctttctataaaa 41063840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 46803760 - 46803670
Alignment:
Q  66 aaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    ||||||||||||||||||| |||| |||||| |  ||| || |||||||||||||||  | |||| |  ||||||||  ||||||||||||    
T  46803760 aaaattgtttttacatctttctatgaaacttattgcaaggataacacaaaaaactatgttgcaaactactatgttttggttttcttaataa 46803670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 47026655 - 47026736
Alignment:
Q  4 aattaaatgcaaattatattcaa--ttttcattctttcattttttccataaacaa-tagccaatgaaaattgtttttacatc 82  Q
    |||||||||||||||| ||||||  ||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||||    
T  47026655 aattaaatgcaaattacattcaaatttttttctctttcattttttccttaaccaattagccaatgaaaattatttatacatc 47026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 4e-66; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 6686389 - 6686555
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaac-ttt 97  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  6686389 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 6686488  T
Q  98 tcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6686489 ttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgatt 6686555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 42273654 - 42273817
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||||  |||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  42273654 taaaattaaatgcaaattgcattcaattttctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttc 42273753  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  42273754 caaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 42273817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43590118 - 43589953
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  43590118 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttt 43590019  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  43590018 tcaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 43589953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 20644021 - 20644184
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||||||  |||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  20644021 aaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 20644120  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  20644121 caaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgatt 20644184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 37522744 - 37522592
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcatt--ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    |||||||||||||||||| |||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37522744 aaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttt 37522645  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttctta 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  37522644 ccaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttctta 37522592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 37562918 - 37562752
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcatt--ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaac-ttt 97  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  37562918 taaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagctaatgaaaattgtttttacatcttcctataaaactttt 37562819  T
Q  98 tcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  37562818 tccaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 37562752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 11262040 - 11261875
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11262040 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 11261941  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||| ||||||||||||||| |||| ||| ||| |||||||| |||||||    
T  11261940 ttcaaagaaaacacaaaaaattatactccaaattctcatgtgttagtttacttaataagtgtgatt 11261875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 34425336 - 34425497
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct-ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    |||||||||||||||||||||||||||||||  ||| ||   ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||     
T  34425336 taaaattaaatgcaaattatattcaattttctctctcttttatttttccataatcaatagccaatgaaaattgtttttacatattcctataaaacttttt 34425435  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
     ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  34425436 tcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtg 34425497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20039107 - 20039270
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttc-at-tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| ||||||| || ||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||| |||    
T  20039107 taaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctataaaaccttt 20039206  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
      |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||    
T  20039207 ttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 20039270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 38130272 - 38130113
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| | |||| |||||||||||  |||  |||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  38130272 taaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcctataaaactttt 38130173  T
Q  99 cccaaagaaaacacaaaaa---actatactccaaattcttatgttttaattttcttaata 155  Q
     | ||||||||||||||||   |||||| ||||||||||||||||||| |||||||||||    
T  38130172 tctaaagaaaacacaaaaaactactatattccaaattcttatgttttagttttcttaata 38130113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8225468 - 8225608
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaa-attgtttttacatcttcctataaaacttttc 99  Q
    |||||||||||||||||||  ||||||||||  ||||||||||||||||||| |||||||||||||||  || ||||||||| ||||||||||||||||     
T  8225468 taaaattaaatgcaaattacgttcaattttctctctttcattttttccataaccaatagccaatgaaattttttttttacattttcctataaaacttttt 8225567  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgtt 140  Q
    |||||||||| ||||||||||||| ||||||||||| ||||    
T  8225568 ccaaagaaaatacaaaaaactatagtccaaattcttttgtt 8225608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 25840871 - 25841034
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||| |||||||  |||  || |||||||||||||||||| | |||||||||||||||||||||||||| || |||||| | |    
T  25840871 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccatgaaacttattc 25840970  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||||||| || |||||| ||||| |||| |||||||||||| |||||||    
T  25840971 caaagaaaacacaaaaaactatgctacaaatttttatgctttagttttcttaataagtgtgatt 25841034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 19413148 - 19413305
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||| |||||||  |||  || ||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| |      
T  19413148 aaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccataaaacttattt 19413247  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaat 158  Q
    |||||||||||||||||||||| || |||||||||||  |||| ||||||||||||||    
T  19413248 caaagaaaacacaaaaaactatgctacaaattcttatactttagttttcttaataaat 19413305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 32111007 - 32111144
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| |||||||  |||  ||||| |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  32111007 taaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcctatgaaactttt 32111106  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattctta 136  Q
      |||||||||||||||| | |||||||||||||||||    
T  32111107 ttcaaagaaaacacaaaacattatactccaaattctta 32111144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38280852 - 38280969
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||||||||||||||||||||  |||  |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||    
T  38280852 taaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacattttcctataaaactttt 38280951  T
Q  99 cccaaagaaaacacaaaa 116  Q
      |||||||| |||||||    
T  38280952 ttcaaagaaagcacaaaa 38280969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 17351395 - 17351558
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||||||| |||||| |||||||||||  ||| |  |||||| ||||||| ||||||||||| ||||||||||||||||||| | ||||||||| | |    
T  17351395 aaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccataaaacttattc 17351494  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||| ||||| | ||||||||||||||||| || ||| || ||| ||||||||||||||||||||    
T  17351495 caacgaaaataaaaaaaactatactccaagtttttacgtattagttttcttaataaatgtgatt 17351558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 43454476 - 43454322
Alignment:
Q  4 aattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccc 101  Q
    ||||||||| |||||| |||||||||||  |||  || ||||| | | ||| ||||||  |||||||||||||||||||| |||||||||||||| |  |    
T  43454476 aattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatattcctataaaacttatgac 43454377  T
Q  102 aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  43454376 aaagaaaacacaaaaaactatatttcaagttcttatgttttaattttcttaataa 43454322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 42104402 - 42104262
Alignment:
Q  3 aaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||||||||||| || ||||||||||  || |||| |||||| |||||||  |||||||||||||||||||||||||||||||| || |||||| | |    
T  42104402 aaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaacttgttc 42104303  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgtttta 143  Q
    |||||| |||||  |||| ||||||||||||||||||||||||    
T  42104302 caaagagaacac--aaaattatactccaaattcttatgtttta 42104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 39505386 - 39505223
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccc 101  Q
    ||||||||||||||||| ||| |||||||  ||| ||   |||||||||||  ||| |||||||||||||||||||||||||| | ||||||||| | ||    
T  39505386 aaattaaatgcaaattacatttaattttctctctcttttatttttccataacgaattgccaatgaaaattgtttttacatcttaccataaaacttattcc 39505287  T
Q  102 aaagaaaacac-aaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||| |||||||||| || |||||||||||  ||||||||| ||||||| |||||||    
T  39505286 aaagaaaacacaaaaaaactatgctacaaattcttatactttaatttttttaataagtgtgatt 39505223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 12912415 - 12912294
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    |||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||||||| ||||| | |    
T  12912415 tctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatattccaactac 12912316  T
Q  134 ttatgttttaattttcttaataa 156  Q
     ||||||||| ||||||||||||    
T  12912315 -tatgttttagttttcttaataa 12912294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 4463367 - 4463528
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||| ||||||||| ||| |||||||  |||  |||||||||||||||| ||||||||| ||||||||||||||||||||||| || || ||| | |    
T  4463367 aaattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcccatgaagcttattc 4463466  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||  | ||| || || |||||||||||| |||| |||||||||||| |||||||    
T  4463467 caaagaaaacac--acaaccatgctacaaattcttatgctttagttttcttaataagtgtgatt 4463528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 9957572 - 9957426
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||||| |||||| ||||  |||||||||||||| |||| |||||||||||||||||||||||||||||||               |    
T  9957572 taaaattaaatgcaaattacattcaactttctctctttcattttttc-ataaccaatagccaatgaaaattgtttttacatctt---------------c 9957489  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||    
T  9957488 caaagaaaacac-aaaaactatactccaaattctcatgttttagttttcttaataagtgtgatt 9957426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 12792897 - 12792777
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||         ||||||||||||||||||||||||||| |||    
T  12792897 tctttcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa---------aagaaaacacaaaaaactatactccaatttc 12792808  T
Q  134 ttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||| |||| ||||||| |||||||    
T  12792807 ttatgttttagtttttttaataagtgtgatt 12792777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 5984214 - 5984126
Alignment:
Q  49 ataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttat 137  Q
    |||| |||||| ||||||||||||||||||||| || ||||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  5984214 ataaccaatagtcaatgaaaattgtttttacatatttctataaaacttattccaaagaaaacacaaaaaactatactctaaattcttat 5984126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 23233451 - 23233581
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||| ||||||| ||||||  ||| |||| ||||||||||| ||||||||||  | ||  ||||||||||||||||||||||||  |||||||    
T  23233451 tctttcattttctccataaccaatagttaataaaaactgtttttacatattcctataaagttgttttcaaagaaaacacaaaaaactatacgtcaaattc 23233550  T
Q  134 ttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||  ||||| ||||| |||||||    
T  23233551 ttatgttttagatttctcaataagtgtgatt 23233581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 41625664 - 41625517
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccc 101  Q
    ||||||||| ||||||| ||| |||||||  ||| |||  ||||| ||||| ||||||| |||||||||  ||||||||||||||||| |||||| |  |    
T  41625664 aaattaaattcaaattacatttaattttccctctcttccattttttcataatcaatagcgaatgaaaataatttttacatcttcctatgaaacttatttc 41625565  T
Q  102 aaagaaaacacaaaaaactatactccaaattcttatgttttaattttct 150  Q
    |||||||||||||||||||||| |  |||||||||||||||| ||||||    
T  41625564 aaagaaaacacaaaaaactata-tttaaattcttatgttttagttttct 41625517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 164
Target Start/End: Complemental strand, 12729991 - 12729876
Alignment:
Q  38 tcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttat 137  Q
    ||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||         ||||||||||||||||||||||||||| |||||||    
T  12729991 tcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa---------aagaaaacacaaaaaactatactccaatttcttat 12729902  T
Q  138 gttttaattttcttaataaatgtgatt 164  Q
    |||||| |||| ||||||| |||||||    
T  12729901 gttttagtttt-ttaataagtgtgatt 12729876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32017709 - 32017803
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct-ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaac 94  Q
    ||||||||||||||||||| |||||| ||||  ||| ||   ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  32017709 taaaattaaatgcaaattacattcaactttctctctctttcgtttttccataaccaatagacaatgaaaattgtttttacatcttcctataaaac 32017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 62 - 164
Target Start/End: Complemental strand, 5736333 - 5736231
Alignment:
Q  62 aatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
    ||||||||||||||||||| |||||||||||| || |  |||||| |||| ||||||||||  | |||| |  |||||||||||||||||||||| ||||    
T  5736333 aatgaaaattgtttttacaacttcctataaaatttatttcaaagataacataaaaaactatgttacaaactactatgttttaattttcttaataagtgtg 5736234  T
Q  162 att 164  Q
    |||    
T  5736233 att 5736231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 32019911 - 32019980
Alignment:
Q  84 tcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaa 153  Q
    |||||||| || ||| | |||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  32019911 tcctataagacgttttctaaagaaaacacagaaaactatactccaaattcttatgttttagttttcttaa 32019980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 104335 - 104271
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||| |||||  |||||| ||||||||||||||||||||||| |||||||||||||    
T  104335 tctttcatttttttcataactaatagctaatgaaaattgtttttacatctttctataaaactttt 104271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 5369152 - 5369064
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    ||||||||||| || |||| ||| | ||||||||||||||||||||||||||||||||||||| |   ||| | |||||||||||||||    
T  5369152 tctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttattttaaaaataacacaaaaaactat 5369064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 8959707 - 8959767
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaacta 121  Q
    |||||||||||||||||||||||||||||||||||| |  |||||| ||||||||||||||    
T  8959707 caatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaacta 8959767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 10154083 - 10153987
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttc-at-tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||||||||||||| |  ||||||||| | || ||||||||||| || || | ||||| |||||||||||||||||||||||||||||||||||||    
T  10154083 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaactt 10153987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 16153440 - 16153353
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaatttt 148  Q
    ||||||||||| ||||||||||||||||||||||||| |  |||||| |||||||||||||||  | |||| | |||||||||| ||||    
T  16153440 ccaatgaaaat-gtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactattatgttttagtttt 16153353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24439575 - 24439738
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattc--tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||  |||||||||    ||  ||| |||||||||||||  | |||||||||| ||||||||||||||||| | || |||||| |    
T  24439575 taaaattaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaatgataattgtttttacatctttccatgaaacttat 24439674  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
     ||||  | ||||||||||| ||||   |||||| | ||||||||| ||| ||||||| |||||    
T  24439675 tccaagaataacacaaaaaattatatctcaaattataatgttttaacttttttaataagtgtga 24439738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 30893350 - 30893243
Alignment:
Q  55 aatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaat 154  Q
    |||| ||||| |||||| |||||||||||| | |||||| |  | | ||  ||||||||| ||||||||||||||||| | |||||||| ||||||||||    
T  30893350 aataaccaataaaaattatttttacatctttccataaaattaattctaagaaaaacacaagaaactatactccaaattatcatgttttagttttcttaat 30893251  T
Q  155 aaatgtga 162  Q
    || |||||    
T  30893250 aagtgtga 30893243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 7071245 - 7071342
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcat--tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||| ||||||| ||||||||||||   |||| |||||| ||| ||| |||||| ||||||||||| ||||||||| |||| || ||||||||    
T  7071245 aaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaattatttttacattttcccatgaaactttt 7071342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 3463970 - 3463808
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  |||||  |||||| || |||| |||   ||||| ||||||||||||| ||||||||||||||||| |     
T  3463970 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaacttatt 3463871  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||| ||||| |||||||||  | |||| |  ||||||||| |||||||||||||| |||||    
T  3463870 tcaaagataacac-aaaaactatgttacaaact-gtatgttttagttttcttaataaatatgatt 3463808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 32079573 - 32079666
Alignment:
Q  63 atgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    |||||||||||||||||||||| | || |||||  |  ||| || |||| ||||||||||| |||||||| | |||||||| ||||||||||||    
T  32079573 atgaaaattgtttttacatctttccattaaactaatttcaaggagaacataaaaaactataatccaaattataatgttttagttttcttaataa 32079666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 8506497 - 8506593
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    ||||||||||||||||||||||||| ||||||||||| |  ||| || |||| || |||||||  | |||| |  ||||||||| ||||||||||||    
T  8506497 ccaatgaaaattgtttttacatctttctataaaacttatttcaaggataacataagaaactatgttgcaaactactatgttttagttttcttaataa 8506593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 1144586 - 1144524
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    |||||||||||||||||||||| ||||||||||| || |   ||||| |||||||||||||||    
T  1144586 ccaatgaaaattgtttttacatattcctataaaatttattttaaagataacacaaaaaactat 1144524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 31690715 - 31690613
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||||||||| |||||||||||| ||||||||||  | ||||  | ||||||||||| |||||  |||||   || || |||||||||||||||| ||    
T  31690715 ccaatgaaaattatttttacatctttctataaaactcattccaagaagaacacaaaaaattatacctcaaatcactaagtattaattttcttaataagtg 31690616  T
Q  160 tga 162  Q
    |||    
T  31690615 tga 31690613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 29307282 - 29307221
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaacta 121  Q
    |||||||||||| |||||||||||||||||||||||| |   |||||  |||||||||||||    
T  29307282 ccaatgaaaattatttttacatcttcctataaaacttattttaaagattacacaaaaaacta 29307221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 13146793 - 13146857
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatac 124  Q
    ||||||| |||| |||||||||||| | ||||||||| | ||||||| ||||||||||| |||||    
T  13146793 ccaatgagaattatttttacatctttccataaaacttattccaaagagaacacaaaaaattatac 13146857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 30703641 - 30703725
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaa 118  Q
    ||||||||||| |  |||| ||||| ||||||||| || ||| ||||||||||||||||| || |  |||||| |||||||||||    
T  30703641 tctttcattttctgaataatcaataaccaatgaaacttttttatacatcttcctataaaatttatttcaaagataacacaaaaaa 30703725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 5659639 - 5659584
Alignment:
Q  36 tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataa 91  Q
    |||||||||||| |||| |||   ||||| ||||||||||||||||||||||||||    
T  5659639 tttcattttttctataatcaactaccaataaaaattgtttttacatcttcctataa 5659584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 16286178 - 16286076
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||| |||| ||||||||||||   || |||||| | ||||||| ||||||||||| |||||  |||||   || || |||||||||||||||| ||    
T  16286178 ccaatgagaattatttttacatcttttcatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtg 16286079  T
Q  160 tga 162  Q
    |||    
T  16286078 tga 16286076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29493668 - 29493592
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttc--attttttccataaacaatagccaatgaaaattgttt 75  Q
    ||||||| ||||||||||||||||||||| || ||| ||  ||||| ||||||| |||||  |||| ||||||||||    
T  29493668 taaaattgaatgcaaattatattcaatttacactctctcctattttctccataaccaataatcaataaaaattgttt 29493592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 6391909 - 6391997
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    ||||||||||| || ||||  |||| ||||| ||| ||||||||||||||| |||| |||||| |  ||||||  | ||||||||||||    
T  6391909 tctttcattttctctataactaataaccaataaaagttgtttttacatctttctatgaaacttatttcaaagatgatacaaaaaactat 6391997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 156
Target Start/End: Original strand, 8143978 - 8144094
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgt 139  Q
    ||||| ||||||| || || ||||||| ||||  |||||| |||| |||| |||||| | ||||  |||| |||||||  |||||  ||||||  |||||    
T  8143978 attttctccataatcattaaccaatgagaattcgttttacttctttctatgaaacttattccaagaaaaatacaaaaatttatacctcaaattaatatgt 8144077  T
Q  140 tttaattttcttaataa 156  Q
    |||| ||||||||||||    
T  8144078 tttatttttcttaataa 8144094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 18718645 - 18718741
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    ||||| ||||||| ||||||||||  ||||||||||| |  ||| || ||||||| |||||||| |  ||| |  ||| ||||||||||||||||||    
T  18718645 ccaattaaaattgcttttacatctatctataaaacttatttcaaggataacacaataaactatattataaactactatattttaattttcttaataa 18718741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 4e-63; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 34890331 - 34890166
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34890331 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 34890232  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  34890231 tccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgatt 34890166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 7022560 - 7022395
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  7022560 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctataaaactttt 7022461  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  7022460 ttcaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataaatgtgatt 7022395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26483535 - 26483700
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  26483535 taaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctataaaactttt 26483634  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  26483635 ttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtgatt 26483700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 7858531 - 7858696
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||||||||  ||||||||||  |||  |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||    
T  7858531 taaaattaaatgcaaattactttcaattttctctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatcttcctataaaactttt 7858630  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7858631 ttcaaataaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgatt 7858696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 36190775 - 36190940
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36190775 taaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 36190874  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||    
T  36190875 ttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttttcttaacaagtgtgatt 36190940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43216504 - 43216339
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| ||||||  |  ||||||||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  43216504 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctataaaactttt 43216405  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  43216404 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 43216339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 24892841 - 24893006
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttc-at-tctttcattttttccataaacaatagccaatgaaaattgtttttac---atcttcctataaaact 95  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||    ||| |||||||||||     
T  24892841 taaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgtttttattatatcctcctataaaacg 24892940  T
Q  96 tttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||| | |||||||||||| ||||    
T  24892941 ttttccaaagaaaacacaaaaaactatactctaaattcttatgtttaagttttcttaataagtgtg 24893006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 34158448 - 34158282
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  ||  |||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  34158448 taaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttt 34158349  T
Q  99 ccc-aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
        ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34158348 ttttaaagaaaacacaacaaactatactccagattcttatgttttaattttcttaataaatgtgatt 34158282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 28348614 - 28348769
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  |||||||| ||||||| |||||||||||| ||||||||||||||| ||||||||||||||||    
T  28348614 taaaattaaatgcaaattacattcaattttctctctctttcatttt-tccataaccaatagccaatggaaattgtttttacatattcctataaaactttt 28348712  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaata 155  Q
     |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||    
T  28348713 tccaaagaaaatacaaaatactatactccaaattcttatgtttttattttcgtaata 28348769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 31734120 - 31734255
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||||||  |||  |||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||      
T  31734120 aaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatcttcctataaaactttttt 31734219  T
Q  101 caaagaaaacacaaaaaactatactccaaattctta 136  Q
    ||||||||||||||||||||||||||||||||||||    
T  31734220 caaagaaaacacaaaaaactatactccaaattctta 31734255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 8711881 - 8712039
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    |||||||||||||||||| |||||||||||  |||  || ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||     
T  8711881 aaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaacttttt 8711980  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgat 163  Q
    ||||| |||||||||||||||||||||||||    ||||||||| |||| ||||||| ||||||    
T  8711981 ccaaa-aaaacacaaaaaactatactccaaa----tatgttttagtttttttaataagtgtgat 8712039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 164
Target Start/End: Complemental strand, 13144060 - 13143937
Alignment:
Q  42 tttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc-caaagaaaacacaaaaaactatactccaaattcttatgtt 140  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  13144060 tttttccataaccaataactaatgaaaattgtttttacatcttcctataaaactttttttcaaagaaaacacaaaaaactatactccaaattcttatgtt 13143961  T
Q  141 ttaattttcttaataaatgtgatt 164  Q
    ||| |||||||||||| |||||||    
T  13143960 ttagttttcttaataagtgtgatt 13143937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 30575957 - 30575826
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctat-aaaacttttcccaaagaaaacacaaaaaactatactccaaatt 132  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||||||   ||||||||||||||||||| |||||||||||    
T  30575957 tctttcattttttccataaccaatagccaatgaaaattgtttttacattttcctgtaaaaactttttttaaagaaaacacaaaaaactttactccaaatt 30575858  T
Q  133 cttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||| |||||||||||| |||||||    
T  30575857 tttatgttttagttttcttaataagtgtgatt 30575826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15958070 - 15957919
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct----ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||||||||||||||||| |||||||||||  |||    |||||||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||    
T  15958070 taaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattgtttttacttattcctataaaactt 15957971  T
Q  97 ttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaatttt 148  Q
    ||  |||||||||||||| |||||||||||||| ||||||| ||||| ||||    
T  15957970 ttttcaaagaaaacacaataaactatactccaatttcttatattttagtttt 15957919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 41086543 - 41086378
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| |||||||  |||  || ||||||||||| | |||||||||||||||||||||||||||||||  ||||||||||||    
T  41086543 taaaattaaatgcaaattacattgaattttctctctgttttattttttccattaccaatagccaatgaaaattgtttttacatctttatataaaactttt 41086444  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||||||||| | |||||| ||||  |||| |||||||||||||| |||||    
T  41086443 ttcaaagaaaacacaaaaaactataattcaaatttttattatttagttttcttaataaatatgatt 41086378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 8107774 - 8107613
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  ||||||| | |||||| ||||||||||||||||||||||||||||| |  | ||||||||||    
T  8107774 taaaattaaatgcaaattacattcaattttctctctctttcatttat-ccataaccaatagccaatgaaaattgtttttacatcatattgtaaaactttt 8107676  T
Q  99 cccaaagaaaacac-aaaaaactatactccaaattcttatgttttaattttcttaataaatgt 160  Q
      ||||||||| || ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  8107675 ttcaaagaaaatacaaaaaaactatactccaaattcttatattttaatttttttaataaatgt 8107613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 29920423 - 29920260
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttc-attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||| | ||||| |||||||||||  ||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||| || |||||| | |    
T  29920423 aaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcccatgaaacttattc 29920324  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||| ||||||||||| | |||| ||||||||||||||||| |||||||||||| |||||||    
T  29920323 caaagataacacaaaaaattgtacttcaaattcttatgttttagttttcttaataagtgtgatt 29920260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 16358233 - 16358104
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||| ||||||||  ||||||||||| ||||||||||||| ||||||     
T  16358233 tctttcatttttttcataatcaatagtcaatgaaaattgattttacatcttcctatgaaactttt-tcaaagaaaacaaaaaaaactatacttcaaattt 16358135  T
Q  134 ttatgttttaattttcttaataaatgtgatt 164  Q
    |||| |||||||||||||||||| |||||||    
T  16358134 ttatattttaattttcttaataagtgtgatt 16358104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8709941 - 8709778
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||||| |||||||||||  ||||  ||||| |||||||   |||| ||||||||| ||||||||| |||||| || | |||| |      
T  8709941 taaaattaaatgcaaattacattcaattttctctcttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccatgagacttattt 8709842  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||||    
T  8709841 caaagaaaacacaaaaaactatactccaaattcttatgttttagtttttttattaagtgtgatt 8709778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 13143767 - 13143904
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||  |  |||||||||||| ||| || ||| |||||||||||||||||||||||||||||||| ||||||||    
T  13143767 taaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcctatgaaactttt 13143866  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattctta 136  Q
      ||| |||||||||||||| |||||| ||||||||||    
T  13143867 ttcaacgaaaacacaaaaaattatacttcaaattctta 13143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 35456181 - 35456038
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| ||||| |||||  |||  || |||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  35456181 taaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttctataaaactttt 35456082  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgtttta 143  Q
      |||| |||||| ||||||||||||| |||||||||||||||||    
T  35456081 -tcaaaaaaaacataaaaaactatacttcaaattcttatgtttta 35456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 35525625 - 35525737
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||  ||||||||||||  |||||||||||| ||||||    
T  35525625 tcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcctgtaaaacttttttcaaagaaaacac--aaaactatactctaaattc 35525722  T
Q  134 ttatgttttaatttt 148  Q
    |||||||||| ||||    
T  35525723 ttatgttttagtttt 35525737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 4047049 - 4046885
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||| |||||||  |||  || ||||||||||||| |||| ||||||||||||| ||||||||| || | || |||||| |      
T  4047049 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccatgaaacttatta 4046950  T
Q  101 caaagaaaacaca-aaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||||| ||||||||| || |||||||||||  ||||||||||||||||| |||||||    
T  4046949 taaagaaaacacacaaaaactatgctacaaattcttatactttaattttcttaataagtgtgatt 4046885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 41362463 - 41362302
Alignment:
Q  2 aaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||| |||||  ||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| |     
T  41362463 aaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 41362364  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
     |||||| |||||||||||||||  | |||| |  ||||||||| |||||||||||||||||    
T  41362363 tcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataaatgtg 41362302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 7499729 - 7499883
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcatttt-ttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttt 97  Q
    |||||||||||| |||||| |||||||||||  |||  |||||||| |||||||| |||||||||||||||||||||||||||||||         ||||    
T  7499729 taaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacatctt---------cttt 7499819  T
Q  98 tcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
       |||||||||| ||||||  ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  7499820 ---caaagaaaacgcaaaaagttatactctaaattcctatgttttagttttcttaataaatgtgatt 7499883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 15824786 - 15824629
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||||||| |||||| ||| |||||||  ||| |  |||||||| ||||| |||||||||||      |||||||||||||| | || |||||| | |    
T  15824786 aaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagccaat------tgtttttacatctttccatgaaacttattc 15824693  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||    
T  15824692 taaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttactaaatgcgatt 15824629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 2052841 - 2052936
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||| |||||||||||  ||||  ||||| ||| ||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  2052841 aaattaaatgcaaattacattcaattttctctcttctattttctccctagccaatagccaatgaaaattgtttttacatcttcccataaaactttt 2052936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 164
Target Start/End: Complemental strand, 44663909 - 44663784
Alignment:
Q  36 tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattctt 135  Q
    ||||||||| ||| ||| ||||||||||| |||||| |||||||||||| | |||||| || | |||||||||||||   ||||||||||| ||||||||    
T  44663909 tttcattttgtccctaatcaatagccaataaaaattatttttacatctttccataaaatttattccaaagaaaacac---aaactatactctaaattctt 44663813  T
Q  136 atgttttaattttcttaataaatgtgatt 164  Q
    ||  |||| |||||||||||| |||||||    
T  44663812 ataatttagttttcttaataagtgtgatt 44663784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 16879547 - 16879400
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||| |||| || |||||||||||  |||  ||||||||  |||||| |||||| |||| |||||||||||||||| |||| || ||| || |      
T  16879547 aaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatattcccatgaaatttattt 16879448  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaatttt 148  Q
    |||||||||||||||||| |||||| ||||||||||| ||||| ||||    
T  16879447 caaagaaaacacaaaaaattatacttcaaattcttatattttagtttt 16879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 17713261 - 17713391
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    |||| ||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||| |  ||| || ||||||| |||||||  | |||| |     
T  17713261 tcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaaata 17713360  T
Q  134 ttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||| |||| ||||||| |||||||    
T  17713361 ctatgttttagtttttttaataagtgtgatt 17713391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3642126 - 3642039
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcct 87  Q
    |||||| |||||||||||| |||||||||||  |||  |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  3642126 taaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaat-aaaattgtttttacatcttcct 3642039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 8745622 - 8745747
Alignment:
Q  35 ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattct 134  Q
    |||| |||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||| |  |||  | ||||||| |||||||  | |||| |      
T  8745622 cttttattttttctataatcaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaagaataacacaagaaactatgttgcaaactac 8745721  T
Q  135 tatgttttaattttcttaataaatgt 160  Q
    ||||||||| ||||||||||||||||    
T  8745722 tatgttttagttttcttaataaatgt 8745747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 8712583 - 8712690
Alignment:
Q  55 aatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaat 154  Q
    |||| ||||| ||||||||||||||||||| ||||||||||| | ||||  | ||||||| |||||| ||| ||| ||  ||||||||| ||||||||||    
T  8712583 aataaccaataaaaattgtttttacatctttctataaaacttattccaataataacacaagaaactaaactgcaagttactatgttttagttttcttaat 8712682  T
Q  155 aaatgtga 162  Q
    ||||||||    
T  8712683 aaatgtga 8712690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 2052947 - 2053031
Alignment:
Q  80 atcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||| ||||||||| | | ||||||||||||||||| |||||| | |||| |||||||||| |||||||||||| |||||||    
T  2052947 atcttcccataaaacttattctaaagaaaacacaaaaaattatacttctaattattatgttttagttttcttaataagtgtgatt 2053031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 162
Target Start/End: Complemental strand, 2628286 - 2628158
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||| || |||| ||||| |||||||||||| |||||||||||||||||||||||| |   || || ||||||| |||||||  | |||| |     
T  2628286 tctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttattttaaggataacacaagaaactatgttgcaaacta 2628187  T
Q  134 ttatgttttaattttcttaataaatgtga 162  Q
     ||||||||  |||||||||||| |||||    
T  2628186 ctatgttttggttttcttaataagtgtga 2628158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 17336806 - 17336910
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||||||||||||||||||||||||||||||| || |  ||||||  ||||||||||||||  | |||| |  ||| ||||| |||||||||||| ||    
T  17336806 ccaatgaaaattgtttttacatcttcctataaaatttatttcaaagatgacacaaaaaactatgttacaaactactatattttagttttcttaataagtg 17336905  T
Q  160 tgatt 164  Q
    |||||    
T  17336906 tgatt 17336910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 38072227 - 38072331
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||||||||||||||||||| ||  ||||||||||    |||||| |||||||||||||||  | |||| |  ||||||||| |||||||||||||||    
T  38072227 ccaatgaaaattgtttttacatttttttataaaacttaattcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataaatg 38072326  T
Q  160 tgatt 164  Q
    |||||    
T  38072327 tgatt 38072331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 8673385 - 8673507
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| || ||||||||| |  |||||  |||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| |     
T  8673385 aaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcttataaaacttatt 8673484  T
Q  100 ccaaagaaaacacaaaaaactat 122  Q
     |||| | |||||||||||||||    
T  8673485 tcaaatataacacaaaaaactat 8673507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 26954514 - 26954452
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||||||||| || |||| ||| | |||||||||||||||||||||||||||||||||||||    
T  26954514 tctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaactt 26954452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 28497253 - 28497133
Alignment:
Q  41 ttttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgtt 140  Q
    ||||||| |||| |||||   ||||||||||||||||||||||||| ||||||||| |  ||| || ||||||| |||||||  | |||| |  ||| ||    
T  28497253 ttttttcaataaccaataagtaatgaaaattgtttttacatcttcccataaaacttatttcaaggataacacaagaaactatgttgcaaactactatatt 28497154  T
Q  141 ttaattttcttaataaatgtg 161  Q
    || ||||||||||||||||||    
T  28497153 tttattttcttaataaatgtg 28497133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 164
Target Start/End: Complemental strand, 4038975 - 4038874
Alignment:
Q  62 aatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
    |||||||||||||||||||||||| |||||||||| |  |||| | ||||| |||||||||  | |||| |  |||||||||||||| ||||||| ||||    
T  4038975 aatgaaaattgtttttacatcttcatataaaacttatttcaaaaataacac-aaaaactatgttacaaactactatgttttaatttttttaataagtgtg 4038877  T
Q  162 att 164  Q
    |||    
T  4038876 att 4038874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 4480841 - 4480911
Alignment:
Q  62 aatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaatt 132  Q
    |||||||||| |||||||||||||| ||||||||| |   ||||| |||||||||| ||||||||||||||    
T  4480841 aatgaaaattatttttacatcttccaataaaacttattttaaagataacacaaaaacctatactccaaatt 4480911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 33563606 - 33563499
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaaca----caaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    |||||||||||||||||||||||||| ||||||||| |   ||| |||| |    ||||||   ||| |  |||||||||||||||||||||||||||||    
T  33563606 caatgaaaattgtttttacatcttcccataaaacttatttaaaaaaaaaaaaatacaaaaagtaatattttaaattcttatgttttaattttcttaataa 33563507  T
Q  157 atgtgatt 164  Q
    ||||||||    
T  33563506 atgtgatt 33563499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 45190700 - 45190752
Alignment:
Q  112 caaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||| |||||||||||||||||||| ||||||||| || |||||||    
T  45190700 caaaaaactatgctccaaattcttatgttttagttttcttaacaagtgtgatt 45190752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 25195202 - 25195085
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  |||||  |||||| || |||| |||   |||||||||||||||||||||||||||||||||| || |     
T  25195202 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa-ttatt 25195104  T
Q  100 ccaaagaaaacacaaaaaa 118  Q
     |||||| |||||||||||    
T  25195103 tcaaagataacacaaaaaa 25195085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 5217430 - 5217559
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||| || ||||  |||| ||||| ||||||||||||||||||| |||| |||||| |  ||| || ||||||| ||||||  || ||| | |    
T  5217430 tctttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttatttcaaggataacacaagaaactacgctgcaactac 5217529  T
Q  134 ttatgttttaattttcttaataaatgtgatt 164  Q
     |||||| || |||||||||||| |||||||    
T  5217530 -tatgttatagttttcttaataagtgtgatt 5217559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 11158675 - 11158721
Alignment:
Q  110 cacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  11158675 cacaaaaaattatattccaaattcttatgttttagttttcttaataa 11158721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 40773499 - 40773397
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||| |||||| |||||||||||||   |||||||| | |  |  |||||||| |||| ||||||||||||| |||| ||||| |||| ||||||||||    
T  40773499 ccaataaaaattatttttacatcttctgttaaaacttattcttagaaaaacacacaaaattatactccaaattgttatattttagtttttttaataaatg 40773400  T
Q  160 tga 162  Q
    |||    
T  40773399 tga 40773397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 3100018 - 3100120
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||| |||| |||||||||||| | || |||||| | |||| || ||||||||||| |||||  |||||  ||| || ||| |||||||||||| ||    
T  3100018 ccaatgagaattatttttacatctttccatgaaacttattccaacgagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 3100117  T
Q  160 tga 162  Q
    |||    
T  3100118 tga 3100120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 34713593 - 34713695
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||| |||| |||||||||||| ||| ||||||| |  |||  ||||||||||||| |||||  |||||   || || ||| |||||||||||||||    
T  34713593 ccaatgagaattatttttacatctttctagaaaacttatttcaagaaaaacacaaaaaattatacctcaaatcactaagtattagttttcttaataaatg 34713692  T
Q  160 tga 162  Q
    |||    
T  34713693 tga 34713695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 14576254 - 14576213
Alignment:
Q  54 caatagccaatgaaaattgtttttacatcttcctataaaact 95  Q
    ||||| |||||||||||| |||||||||||| ||||||||||    
T  14576254 caataaccaatgaaaattatttttacatctttctataaaact 14576213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 41755931 - 41756022
Alignment:
Q  3 aaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaa 93  Q
    |||||||||| |||||| ||||||||||  |  ||||||||||| ||||||| |||||  ||||||| ||| ||||||||| || ||||||||    
T  41755931 aaattaaatgtaaattacattcaattttttctctctttcatttt-tccataagcaataatcaatgaacattatttttacatttttctataaaa 41756022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 14693434 - 14693466
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaa 93  Q
    ||||||||||||||||||||||||| |||||||    
T  14693434 caatgaaaattgtttttacatcttcttataaaa 14693466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 4e-63; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45485960 - 45486125
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  45485960 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttt 45486059  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  45486060 tccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgatt 45486125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 46760412 - 46760247
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||| |||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46760412 taaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 46760313  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  46760312 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 46760247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 19912922 - 19912759
Alignment:
Q  3 aaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||||||   |||||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||||||||| |    
T  19912922 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttttacattttactataaaactttttc 19912823  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19912822 caaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgatt 19912759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14805875 - 14806039
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14805875 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 14805974  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  14805975 -tcaaagaaaatacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 14806039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 15252869 - 15253033
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15252869 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 15252968  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  15252969 -tcaaagaaaatacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 15253033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 18102535 - 18102700
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||| |||  |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  18102535 taaaattaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttt 18102634  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  18102635 ttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgatt 18102700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 25737782 - 25737617
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25737782 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 25737683  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||||||| |||||||||| ||||||| |||||||||| |||||||||||| |||||||    
T  25737682 tccaaagaaaacacacaaaactataccccaaatttttatgttttagttttcttaataagtgtgatt 25737617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 35923257 - 35923421
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  35923257 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 35923356  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  35923357 tccaaagaaaacac-aaaaactatactccaaatttttatgttttagttttcttaataagtgtgatt 35923421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 20123835 - 20123691
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  20123835 taaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgctataaaactttt 20123736  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgtttta 143  Q
     |||||||| |||||||||||||||||||||||||||||||||||    
T  20123735 tccaaagaatacacaaaaaactatactccaaattcttatgtttta 20123691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 6191050 - 6191215
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| ||| ||||||  |  ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6191050 taaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 6191149  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
       |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  6191150 ttaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 6191215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 25944581 - 25944738
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  || ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  25944581 taaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttt 25944680  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
     ||||||||||||||||||  |||||||||||||||||| ||||| ||||||||||||    
T  25944681 tccaaagaaaacacaaaaacttatactccaaattcttatattttagttttcttaataa 25944738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 12632464 - 12632334
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||| |||||||||| |  |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||    
T  12632464 tcttttattttttccacagccaatagccaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacataaaaaactatactccaaattc 12632365  T
Q  134 ttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||||||||||||||||    
T  12632364 ttatgttttaattttcttaataaatgtgatt 12632334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 4910788 - 4910625
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||  |  ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  4910788 taaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctataaaactttt 4910689  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     | ||||||||||||||||  |||||| ||||||||||||||||| |||| | ||||| |||||||    
T  4910688 tctaaagaaaacacaaaaa--tatacttcaaattcttatgttttagttttttaaataagtgtgatt 4910625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 47779611 - 47779774
Alignment:
Q  3 aaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||| |||||||   |||||| ||||||||||||| || | |||||||||||||||||||||||||||| || |||||| | |    
T  47779611 aaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccatgaaacttattc 47779710  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||||| || |||||||||||| |||| |||||||||||| |||||||    
T  47779711 taaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtgatt 47779774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 22632096 - 22632259
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||| |||||||  ||| |  |||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||| |      
T  22632096 aaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcccatgaaacttattt 22632195  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||| |||| || |||| | ||||| |||| |||||||||||| |||||||    
T  22632196 caaagaaaacacaaaaatctatgctacaaacttttatgctttagttttcttaataagtgtgatt 22632259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 44682885 - 44683047
Alignment:
Q  3 aaattaaatgcaaattatattcaattttc-at-tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||| ||||||||| || |||||||| || |||||||||| | |||||| |||||| |||||||||||||||||||||||||  || |||||| | |    
T  44682885 aaattaattgcaaattacatccaattttctatatctttcatttct-ccataaccaatagtcaatgaaaattgtttttacatcttcgcatcaaacttattc 44682983  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||| ||||||||||| | |||||||||||||||||| || || |||||||||| |||||||||    
T  44682984 caaaaaaaacacaaaatattatactccaaattcttattttctagttttcttaatgaatgtgatt 44683047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 14574569 - 14574726
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| | |||||||||| ||| |  |||||| | ||||| |||||| ||||| ||||| |||||||||||||| || |||||| |    
T  14574569 taaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatcttcccatgaaacttat 14574668  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
        ||||||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  14574669 tatcaagaaaacacaaaaaactatactccaaattcttatattttggttttcttaataa 14574726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 47557753 - 47557622
Alignment:
Q  4 aattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaa--acttttc 99  Q
    |||||||||||||||| ||| ||||||| ||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    ||||     
T  47557753 aattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatcttcctataaatttttttta 47557654  T
Q  100 ccaaagaaaacacaaaaaactatactccaaat 131  Q
      ||| ||||||||||||||||||||||||||    
T  47557653 aaaaaaaaaacacaaaaaactatactccaaat 47557622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 16917479 - 16917641
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattctttcattttttc-cataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccc 101  Q
    |||||||||||||||||  ||||||||||  | ||||   ||||| ||||| ||||||  ||||||||||||||||||||||||| || |||||| | ||    
T  16917479 aaattaaatgcaaattactttcaattttctctatttcccattttcacataaccaatagttaatgaaaattgtttttacatcttcccatgaaacttattcc 16917578  T
Q  102 aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||| ||||||   |||| | |||||| ||||||||||||||||||||||| |||||||    
T  16917579 aaagaaaaaacaaaatgttatatttcaaatttttatgttttaattttcttaataagtgtgatt 16917641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 15995724 - 15995882
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| | |||||||||| ||| |  |||||| | ||||| ||||| |||||| ||||| |||||||||||| | || |||||| |    
T  15995724 taaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatctttccatgaaacttat 15995823  T
Q  99 cccaaagaaaacacaaaa-aactatactccaaattcttatgttttaattttcttaataa 156  Q
        |||||||||||||| ||||||||||||||||||||| ||||  ||||||||||||    
T  15995824 tatgaagaaaacacaaaaaaactatactccaaattcttatattttggttttcttaataa 15995882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 2610721 - 2610586
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||| ||||||||| ||||||||||  |||| |  |||||| ||||||| |||||||||| ||||| |||||||||||||| |||||||  || | |    
T  2610721 aaattaagtgcaaattacattcaatttttcttctcttccattttctccataaccaatagccaaagaaaaatgtttttacatctttctataaattttattc 2610622  T
Q  101 caaagaaaacacaaaaaactatactccaaattctta 136  Q
    ||||| || | ||||||| |||||||||||||||||    
T  2610621 caaaggaagcgcaaaaaaatatactccaaattctta 2610586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9158095 - 9158193
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||| |||  ||||  ||||||||||| |||| |||| ||||| ||||||||||||||||||||||||||||||||||    
T  9158095 taaaattaaatgcaaattacattcaaatttttttctctttcattttttc-ataaccaatggccaaagaaaattgtttttacatcttcctataaaactttt 9158193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 130
Target Start/End: Complemental strand, 35068954 - 35068872
Alignment:
Q  49 ataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaa-aaaactatactccaaa 130  Q
    |||| ||||||| ||| |||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||| ||||||    
T  35068954 ataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaaactatattccaaa 35068872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 37767071 - 37767011
Alignment:
Q  102 aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
    ||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  37767071 aaagaaaacacaaaaaactatactccaaattatcatgttttagttttcttaataaatgtga 37767011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 39170540 - 39170700
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttc-at-tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| | || ||||||||||| || |||| ||||  | |||||||||||||||||||||||| |||||||||| |     
T  39170540 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttcgtataaaacttatt 39170639  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgt 160  Q
     ||| || ||||||| |||||||  | |||| |  ||| ||||||||||||||||||||||    
T  39170640 tcaaggataacacaataaactatgttacaaactactatattttaattttcttaataaatgt 39170700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 48413728 - 48413859
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    ||||||||||||||||| |||||||||||  ||||  ||||| ||||||| |||||| ||||||||||||||||| |||||||  ||||||||| |        
T  48413728 aaattaaatgcaaatta-attcaattttctctcttctattttctccataaccaatagtcaatgaaaattgtttttgcatcttctcataaaacttat---t 48413823  T
Q  103 aagaaaacacaaaaaactatactccaaattcttatgtt 140  Q
    || |||||||  |||| |||||||||||||||||||||    
T  48413824 aaaaaaacac--aaaattatactccaaattcttatgtt 48413859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 11780023 - 11780171
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||  |||||||   ||||| |||||| | |||||  ||||| |||||||| || |||||||||||||| |||||| || |    
T  11780023 taaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataagaaatagtcaatgaaa-ttatttttacatcttccaataaaatttat 11780121  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaatttt 148  Q
       ||||||||||| |||||||||| ||||||||||||| ||||| ||||    
T  11780122 tttaaagaaaacacgaaaaactatattccaaattcttatattttagtttt 11780171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 8015806 - 8015732
Alignment:
Q  21 attcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaact 95  Q
    |||||||||||  |||| ||||||||| |||| ||||| ||||| |||||||||||||||||||| |||||||||    
T  8015806 attcaattttctctcttgcattttttctataatcaataaccaataaaaattgtttttacatcttcttataaaact 8015732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 10248594 - 10248700
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaa-aaaactatactccaaa-ttcttatgttttaattttcttaataaa 157  Q
    ||||||||||||||||||||||||| ||||||||||| |  ||| || ||||||| ||||||||  | |||| | || |||||||| |||||||||||||    
T  10248594 ccaatgaaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaaactatgttacaaactactaatgttttagttttcttaataaa 10248693  T
Q  158 tgtgatt 164  Q
    |||||||    
T  10248694 tgtgatt 10248700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 164
Target Start/End: Complemental strand, 35888061 - 35887959
Alignment:
Q  62 aatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
    |||||||||||||||||||||||||||||||| || |  |||||| ||||||||||| |||  | |||| |  ||||||||| |||| ||||||| ||||    
T  35888061 aatgaaaattgtttttacatcttcctataaaagttatttcaaagataacacaaaaaattatgttacaaactactatgttttagtttttttaataagtgtg 35887962  T
Q  162 att 164  Q
    |||    
T  35887961 att 35887959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 38260356 - 38260486
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||| || ||||  |||| |||||||||||| |||||||| ||| ||||||||||| |  |||  | |||||||||||||||| | |||| |     
T  38260356 tctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatttcaagaataacacaaaaaactatattacaaacta 38260455  T
Q  134 ttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||| ||||||| |||||||    
T  38260456 caatgttttaatttttttaataagtgtgatt 38260486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 31769055 - 31768994
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    |||||||||||||||||||||||||||||||||||| |  ||||||  ||||||||||||||    
T  31769055 caatgaaaattgtttttacatcttcctataaaacttatttcaaagatgacacaaaaaactat 31768994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 4069043 - 4069107
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||| |||||| ||||||| ||||| |||||||||||| |||||||||||| |||||||||||||    
T  4069043 tcttccattttctccataaccaataaccaatgaaaattctttttacatctttctataaaactttt 4069107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 29713229 - 29713357
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    ||||||||||| || ||||  |||| ||||||||||||||||||||| ||| |||| ||| || | | |||||  |||||| |||||||||| ||||       
T  29713229 tctttcattttctctataattaatatccaatgaaaattgtttttacaactttctatgaaagttattctaaagatgacacaagaaactatactacaaacaa 29713328  T
Q  134 ttatgttttaattttcttaataaatgtga 162  Q
    | |||| ||| ||||||||||||||||||    
T  29713329 tgatgtcttagttttcttaataaatgtga 29713357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 31550016 - 31549936
Alignment:
Q  41 ttttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaacta 121  Q
    ||||| |||||| |||| | |||||||| |||||||||||||||||||||||| || | | ||||||||| ||||||||||    
T  31550016 tttttcccataaccaattgtcaatgaaagttgtttttacatcttcctataaaatttattctaaagaaaacgcaaaaaacta 31549936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 27810888 - 27810804
Alignment:
Q  3 aaattaaatgcaaattatattcaattttc-at-tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttc 85  Q
    ||||||||||||||||| ||||||||||| || |||| |||||| |  |||| ||||| ||||| ||||||||||||||||||||    
T  27810888 aaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacatcttc 27810804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 33153039 - 33153202
Alignment:
Q  1 taaaattaaatgcaaattatattcaattt-tcattctttc-attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||  ||||||||| |  | ||||| ||||| ||||||| || || ||||| | ||||||||||||||||| | |||||| || |    
T  33153039 taaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattgtttttacatctttccataaaatttat 33153138  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
      |||  | ||||||||||| |||||| |||| | |||||||||  |||| ||||||| |||||    
T  33153139 ttcaagaagaacacaaaaaattatacttcaaactattatgtttttgtttttttaataagtgtga 33153202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 24151672 - 24151640
Alignment:
Q  64 tgaaaattgtttttacatcttcctataaaactt 96  Q
    |||||||||||||||||||||||||||||||||    
T  24151672 tgaaaattgtttttacatcttcctataaaactt 24151640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 40560443 - 40560539
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    ||||||| |||| |||||||||||| ||||||||||| |  ||| || ||||||||||| |||||  |||||| ||| || ||| |||| |||||||    
T  40560443 ccaatgagaattatttttacatctttctataaaacttatttcaaggagaacacaaaaaattatacctcaaattattaagtgttagtttttttaataa 40560539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 48879449 - 48879545
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    ||||||| |||| |||||||||||| ||||||||||| | |||| || || |||||||| |||||  |||||  ||| || ||| ||||||||||||    
T  48879449 ccaatgagaattatttttacatctttctataaaacttattccaaggagaatacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 48879545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 19492548 - 19492390
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttc-attttttccataaacaatagccaatgaaaattgtttttacatcttcctataa--aactttt 98  Q
    ||||||||| ||||||||||||||||||| |||| ||| ||||| ||||||| ||| || | || |||||||||||| ||| || | || |  || |||     
T  19492548 aaattaaatacaaattatattcaattttctttctcttctattttctccataaccaacagtcgataaaaattgtttttgcatattaccatgatgaaattta 19492449  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaa 157  Q
       ||| |||| |||||||  ||||||| ||||| |||||||||| |||||||||||||    
T  19492448 ttaaaaaaaaatacaaaaagttatactctaaatttttatgttttagttttcttaataaa 19492390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 18206372 - 18206270
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||| |||| |||||||||||| | || |||||| | |||| || ||||||||||| |||||  |||||   || || |||||||||||||||| ||    
T  18206372 ccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtg 18206273  T
Q  160 tga 162  Q
    |||    
T  18206272 tga 18206270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 162
Target Start/End: Complemental strand, 35084178 - 35084052
Alignment:
Q  36 tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattctt 135  Q
    ||||||||| ||||||| || || ||||| | |||||||||||||||||  ||| |||||| |  |||  | ||||||||||||||||   ||||||  |    
T  35084178 tttcattttctccataatcattatccaataagaattgtttttacatctttttatgaaacttatttcaagaagaacacaaaaaactataactcaaattact 35084079  T
Q  136 atgttttaattttcttaataaatgtga 162  Q
     ||||||| |||||||| ||| |||||    
T  35084078 gtgttttagttttcttattaagtgtga 35084052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 43107958 - 43107856
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||| |||| |||||||||||| | || |||||| | |||| || ||||||||||| |||||  |||||   || || ||| |||||||||||||||    
T  43107958 ccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataaatg 43107859  T
Q  160 tga 162  Q
    |||    
T  43107858 tga 43107856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 41815746 - 41815682
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatac 124  Q
    ||||||| |||| |||||||||||| | ||||||||| | |||| || ||||||||||| |||||    
T  41815746 ccaatgagaattatttttacatctttccataaaacttattccaaggagaacacaaaaaattatac 41815682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 4e-63; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11082401 - 11082244
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  11082401 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttt 11082302  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11082301 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 11082244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 21542427 - 21542588
Alignment:
Q  5 attaaatgcaaattatattcaattttcatt--ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    ||||||||||||||| ||||||||||| ||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  21542427 attaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttcca 21542526  T
Q  103 aagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  21542527 aagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 21542588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 35129211 - 35129045
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgttt-ttacatcttcctataaaacttt 97  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  35129211 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaacttt 35129112  T
Q  98 tcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  35129111 ttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 35129045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3095875 - 3095711
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3095875 taaaattaaatgcaaattacattcaattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttt 3095776  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||| |||||    
T  3095775 -ccaaagaaaacacaaaaaactatactccaaatttttatgctttagttttcttaataaatatgatt 3095711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 34177797 - 34177632
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||| ||   |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||    
T  34177797 taaaattaaatgcaaattacattcaattatctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaatttttt 34177698  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  34177697 tccaaagaaaacacaaaaaactatattccaaattcttatgttttaattttcttaataagtgtgatt 34177632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 7275029 - 7274866
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||| ||||||| ||| |||||||  |||  |||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||| | |    
T  7275029 aaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaaacttattc 7274930  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||| |||||||||||| || ||||||||||||||||| |||||||||||| |||||||    
T  7274929 caaagaaaatacaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtgatt 7274866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 30794346 - 30794183
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttc-attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||| |||||||  ||| ||| ||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||| | |    
T  30794346 aaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctataaaacttattc 30794247  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||| |||||| |||||| |||||| ||||||||||| ||||| |||||||||||||| |||||    
T  30794246 caaataaaacataaaaaattatacttcaaattcttatattttagttttcttaataaatctgatt 30794183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 12461583 - 12461420
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttc-attttttccataaacaatagccaatgaaaattgtttttacatcttcctat-aaaacttttc 99  Q
    ||||||||| ||||||| |||||||||||  ||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||||| |     
T  12461583 aaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctttctataaaaacttatt 12461484  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||| | ||||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  12461483 tcaaagaaaata-aaaaaactatattccaaattctcatgttttagttttcttaataaatgtgatt 12461420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 7 - 164
Target Start/End: Complemental strand, 17751894 - 17751735
Alignment:
Q  7 taaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaa 104  Q
    ||||||||||||| ||||||||||  |  |||| |||||| ||||||| |||||||||||||  | ||||||||||| ||   | |||||||   | |||    
T  17751894 taaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacattttttaaaaaaacttaatctaaa 17751795  T
Q  105 gaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  17751794 gaaaacacaaaaaactatactccaaattcttatattttaattttcttaataagtgtgatt 17751735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 31107196 - 31107320
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcat-tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||||||| |||||||||   | |||||||||||||| |||| |||||| |||| |||||  ||||||||| ||| ||||||  ||||     
T  31107196 taaaattaaatgcaaattacattcaatttctttctctttcattttttctataatcaatagtcaataaaaatcatttttacattttcttataaattttttt 31107295  T
Q  100 ccaaagaaaacacaaaaaactatac 124  Q
     ||||||||||||||||||||||||    
T  31107296 tcaaagaaaacacaaaaaactatac 31107320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 164
Target Start/End: Complemental strand, 14573243 - 14573119
Alignment:
Q  39 cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatg 138  Q
    |||||| ||||||| ||| |  ||||||||||| |||||||||| ||| |||| |||| |  ||||||||| |||||||  |||||||||||||| |||     
T  14573243 cattttctccataatcaacaaacaatgaaaattatttttacatcatcccataatacttatttcaaagaaaatacaaaaat-tatactccaaattcatata 14573145  T
Q  139 ttttaattttcttaataaatgtgatt 164  Q
    ||||| ||||||||||||||||||||    
T  14573144 ttttagttttcttaataaatgtgatt 14573119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 16524443 - 16524505
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||||||    
T  16524443 ccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactat 16524505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 4031991 - 4032158
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  |||||  |||||| || |||| |||   ||||||||||||||||||||||||||| ||||||||| |     
T  4031991 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaacttatt 4032090  T
Q  100 ccaaagaaaacacaaaaaactatactccaaa-ttct--tatgttttaattttcttaataaatgtgatt 164  Q
     |||||| |||||||||||||||  | |||| | ||  ||||||||| |||||||||||| |||||||    
T  4032091 tcaaagataacacaaaaaactatgttacaaactactactatgttttagttttcttaataagtgtgatt 4032158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 4987947 - 4988115
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattc--tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  ||  ||||||||| || |||| |||   |||||||||||| |||||||||||||||||||||||| |     
T  4987947 aaaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 4988046  T
Q  100 ccaaagaaaacacaaaaaactatactccaaa----ttcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||| |||||||||||||||  | ||||    | | ||| |||||||||| |||||||||||||||    
T  4988047 tcaaagataacacaaaaaactatgttacaaactactacctatattttaatttttttaataaatgtgatt 4988115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 9428857 - 9428915
Alignment:
Q  106 aaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||| |||||| ||||||||||||||||| |||| |||||||||||||||    
T  9428857 aaaacacaaaaaattatacttcaaattcttatgttttagttttattaataaatgtgatt 9428915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 16013527 - 16013465
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||| || ||||||||||||    
T  16013527 ccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaaaaactat 16013465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 5822123 - 5822027
Alignment:
Q  66 aaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
    ||||||||||||||||||| |||| |||||| | ||||||| ||||||| ||| |||||| |||| | | || ||||| |||||||||||| |||||    
T  5822123 aaaattgtttttacatctttctatgaaacttattccaaagataacacaagaaattatactacaaactataatattttagttttcttaataagtgtga 5822027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 5300701 - 5300659
Alignment:
Q  54 caatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  5300701 caataaccaatgaaaattgtttttacatcttcctataaaactt 5300659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 17598294 - 17598450
Alignment:
Q  1 taaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||  |||||||||  ||  | ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |||||| || |    
T  17598294 taaaattaaatgcaaattgcattcaatttattctcttttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaatttat 17598393  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaata 155  Q
     ||||||| ||||||||||| |||||  |||||  ||| || |||||||||||||||    
T  17598394 tccaaagagaacacaaaaaattatacctcaaatcattaagtgttaattttcttaata 17598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 5881872 - 5881746
Alignment:
Q  35 ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattct 134  Q
    |||||||||| || ||||  |||| ||||| ||||||||||||||||||| |||| ||||||   ||||||| |||| || ||| |||||| |||| | |    
T  5881872 ctttcattttctctataattaataaccaattaaaattgtttttacatctttctatgaaacttagtccaaagataacagaagaaattatactgcaaactat 5881773  T
Q  135 tatgttttaattttcttaataaatgtga 162  Q
     || |||| | |||||||||||||||||    
T  5881772 aatatttt-agtttcttaataaatgtga 5881746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 15830760 - 15830863
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgt 160  Q
    ||||||||||| ||||||||||||||||| |||||| |   ||| | ||||||||||| |||  |  ||| | |||||||||| |||| |||||||||||    
T  15830760 caatgaaaattttttttacatcttcctattaaacttattttaaaaataacacaaaaaattatgttagaaactattatgttttagtttttttaataaatgt 15830859  T
Q  161 gatt 164  Q
    ||||    
T  15830860 gatt 15830863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 3888494 - 3888553
Alignment:
Q  63 atgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    ||||||||||||| |||||||||||||||||||| |  |||| | |||||||| ||||||    
T  3888494 atgaaaattgtttctacatcttcctataaaacttatttcaaatataacacaaataactat 3888553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9428775 - 9428844
Alignment:
Q  1 taaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaa 68  Q
    ||||||| ||||||||||||||| |||||  ||  ||||| |||||||| |||| |||||||||||||||    
T  9428775 taaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagccaatgaaa 9428844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 4e-63; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 37042532 - 37042367
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37042532 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttt 37042433  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  37042432 tccaacgaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgatt 37042367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11054423 - 11054269
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaac-ttttc 99  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||     
T  11054423 taaaattaaatgcaaattacattcaattttc--tctttcattttttccataaccaatagccaatgaaaattgtttttaaatcttcctataaaactttttt 11054326  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  11054325 ccaaagaaaacacaaaaaactatactccaaattcttatattttagttttcttaataa 11054269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 30189579 - 30189745
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcatttt-ttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttt 97  Q
    |||||||||||| |||||| ||||||| |||   |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30189579 taaaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 30189678  T
Q  98 tcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  30189679 tttcaaagaaaacacaaaaaactatactccaaattcttatgttttaatttttttaataagtgtgatt 30189745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28875415 - 28875580
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcatt--ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||| ||||||| ||||||||||| ||  |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  28875415 taaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 28875514  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  28875515 tccaaagaaaacacaaataactatagtccaaattcttatgctttagttttcttaataaatgtgatt 28875580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 14752323 - 14752158
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||  ||||    
T  14752323 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaatttttt 14752224  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||    
T  14752223 tccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttctaaataagtgtgatt 14752158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 47864200 - 47864365
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||  |  ||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  47864200 taaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctataaaactttt 47864299  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||  ||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  47864300 ttcaaagaaaatgcaaaaaactatactccaaattctcatgttttagttttcttaataaatgtgatt 47864365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 23311708 - 23311551
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| | |||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23311708 taaaattaaatgtatattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 23311609  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
      ||||||||||||| |||||||||||| ||||| |||||||||| ||||||||||||    
T  23311608 ttcaaagaaaacacacaaaactatactctaaatttttatgttttagttttcttaataa 23311551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 50651152 - 50650987
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  || ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  50651152 taaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttt 50651053  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||||||||| | ||||||||||||||||| |||||||||||| |||||||    
T  50651052 tgcaaagaaaacacaaaaaactatatttcaaattcttatgttttagttttcttaataagtgtgatt 50650987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 35963161 - 35963326
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||  ||| |||||||  |||  |||||||| ||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||    
T  35963161 taaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctataaaactttt 35963260  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  35963261 tccaaacaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 35963326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 7866598 - 7866433
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttc-at-tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| ||||||||||| || ||||| ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||    
T  7866598 taaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcttataaaactttt 7866499  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||| | |||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  7866498 ttcaaagaaaataaaaaaaactatactctaaattcttatgttttagttttcttaataagtgtgatt 7866433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 6075090 - 6075255
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  |||||||||| ||||| |||| ||||||||||||||||||||| ||||||| ||| ||||||    
T  6075090 taaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttcttcctgtaacactttt 6075189  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||| ||||||||||||||||||  |||| |||||||||||| |||||||    
T  6075190 tccaaagaaaacacaaaaaattatactccaaattcttatactttagttttcttaataagtgtgatt 6075255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 37074967 - 37075126
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt----cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||||||||||||||||| ||||||||||    |  | |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||    
T  37074967 taaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttcctataaaactt 37075066  T
Q  97 ttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    || ||||||||||||||||||| |||||| ||||||||||||||||| |||| |||||||    
T  37075067 tttccaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttttttaataa 37075126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 46711772 - 46711608
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||| ||||||| |||||| ||||  |||  ||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  46711772 taaaattaaatacaaattacattcaaatttctctctctttcattttttc-ataaccaatagccaatgaatattgtttttacatcttcctataaaactttt 46711674  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||| |||||||||||||||||||||||  |||||||||||| |||||||    
T  46711673 ttcaaagaaaacacaaaaaattatactccaaattcttatgttttcgttttcttaataagtgtgatt 46711608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 23910584 - 23910463
Alignment:
Q  43 ttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgtttt 142  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||    
T  23910584 ttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttacaaagaaaacacaaaaagctatactctaaattcttatgtttt 23910485  T
Q  143 aattttcttaataaatgtgatt 164  Q
    |||||||||||||| |||||||    
T  23910484 aattttcttaataagtgtgatt 23910463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 579253 - 579095
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  579253 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatcttcctataaaactttt 579154  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||||       |||||||||||||||||| |||||||||||| |||||||    
T  579153 ttcaaagaaaacacaaaaaa-------ccaaattcttatgttttagttttcttaataagtgtgatt 579095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 29235204 - 29235361
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    |||||||||| |||||| |||||||| ||    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||| ||| | |    
T  29235204 aaattaaatgtaaattacattcaattctc----tttcattttttccataaccaatagccaatgaaaattatttttacatcttcctattaaacgttttcta 29235299  T
Q  103 aagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  29235300 aagaaaatacaaaaaactatactctaaattcttatgttttagttttcttaataagtgtgatt 29235361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 36546551 - 36546714
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| |||| ||  |||  ||||||||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  36546551 taaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttt 36546650  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
     |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||| |||||    
T  36546651 tccaaagaaaatacaaaaaactatactctaaatttttatgttttagttttcttaataagtgtga 36546714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 36561764 - 36561601
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| |||| ||  |||  ||||||||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  36561764 taaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttt 36561665  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
     |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||| |||||    
T  36561664 tccaaagaaaatacaaaaaactatactctaaatttttatgttttagttttcttaataagtgtga 36561601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 6438092 - 6438229
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| ||||||  |  ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  6438092 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaagctttt 6438191  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattctta 136  Q
      ||||||||||||||||||||||||||||||||||||    
T  6438192 ttcaaagaaaacacaaaaaactatactccaaattctta 6438229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 53270242 - 53270408
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct----ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||||||||| ||||||| ||||||||||| ||||    |||||||||||||||| |||||| ||||||||||| ||||| |||||| |||| ||||||    
T  53270242 taaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattattttttcatctttctatgaaactt 53270341  T
Q  97 ttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||    
T  53270342 ttttcaaagaaaacacaaaaaactatactccaaattcttatg-tttaattttcttaatgagtgtgatt 53270408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 50730118 - 50730283
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttc--attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| |||||||||||  |||||   ||||||||||||| |||||| ||||||   || ||||||||||||||||||||||||||    
T  50730118 taaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatgattttt-tttttacatcttcctataaaactttt 50730216  T
Q  99 cccaaagaaaacacaaaa-aactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50730217 tccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgatt 50730283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 50782736 - 50782571
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttc--attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| |||||||||||  |||||   ||||||||||||| |||||| ||||||   || ||||||||||||||||||||||||||    
T  50782736 taaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatgattttt-tttttacatcttcctataaaactttt 50782638  T
Q  99 cccaaagaaaacacaaaaaa-ctatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  50782637 tccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgatt 50782571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 54465010 - 54464846
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||| |||||||| |||||||||||  |||  |||| ||||||||||| |||||||||| ||||||||||||||||||||||||| ||  ||||    
T  54465010 taaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatcttcctat-aatttttt 54464912  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
       ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||    
T  54464911 tttaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtgatt 54464846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 37 - 165
Target Start/End: Original strand, 31836966 - 31837094
Alignment:
Q  37 ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattctta 136  Q
    |||||||| |||| || |||||| ||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  31836966 ttcattttctccacaaccaatagtcaatgaaaattgtttttgcatattcctataaaactttttccaaagaaaatacaaaaaactatactccaacttctta 31837065  T
Q  137 tgttttaattttcttaataaatgtgatta 165  Q
    ||||||| |||||||||||| ||||||||    
T  31837066 tgttttagttttcttaataagtgtgatta 31837094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 9264616 - 9264725
Alignment:
Q  55 aatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaat 154  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  9264616 aatagccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaaactatactcaaaattcatatgttttagttttcttaat 9264715  T
Q  155 aaatgtgatt 164  Q
    || |||||||    
T  9264716 aagtgtgatt 9264725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 41476444 - 41476285
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattc--tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||| |||  ||||||||||||| ||       ||||||||||||| |||||||||||| |||||||||||||    
T  41476444 taaaattaaatgcaaattagattcaattttctttccctttcattttttcccta-------gccaatgaaaattatttttacatctttctataaaactttt 41476352  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatg-ttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||||    
T  41476351 ttcaaagaaaacacaaaaaactatactccaaatttttatgtttttagttttcttaataagtgtgatt 41476285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 2927300 - 2927464
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttc-attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||| ||||||| ||| |||||||  ||| ||| ||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||||| | |    
T  2927300 aaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcccataaaacttattc 2927399  T
Q  101 caaagaaaacac-aaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||| || |||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  2927400 caaagaaaatacaaaaaaactatgctacaaattcttatgttttagttttcttaataaatgtgatt 2927464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 8703118 - 8703279
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| ||||||| ||||  ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||  ||||    
T  8703118 taaaattaaatgcaaattacattaaattttctttctctttcattttt-ccataatcaatagccaatgaaa-ttgtttttacatcttcctataaatttttt 8703215  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||| || |||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||    
T  8703216 tccaaa-aacacacaaaa-actatactccaaattcttatgttttagtttttttaataagtgtgatt 8703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9055005 - 9055166
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| ||||||| ||||  ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||  ||||    
T  9055005 taaaattaaatgcaaattacattaaattttctttctctttcattttt-ccataatcaatagccaatgaaa-ttgtttttacatcttcctataaatttttt 9055102  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||| || |||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||    
T  9055103 tccaaa-aacacacaaaa-actatactccaaattcttatgttttagtttttttaataagtgtgatt 9055166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 20847383 - 20847235
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||  |  ||||||||||| ||||||| ||||  ||||||||||||||||  |||||||||||| |||||| |    
T  20847383 taaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatgaaacttat 20847284  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaatttt 148  Q
     |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  20847283 tccaaagaaaacaca-aaaattatactccaaattcttatgttttaatttt 20847235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 19464091 - 19464248
Alignment:
Q  8 aaatgcaaattatattcaa--ttttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaag 105  Q
    |||||||||||| ||||||  |||||  |||||||||||| |||||| |||||   ||||||||||||||||  |||||||||||||||||||  |||||    
T  19464091 aaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatcttcctataaaacttttttcaaag 19464190  T
Q  106 aaaacacaaaaaac--tatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
    ||||||||||||||  |||||||||||||||||||||||| |||| ||||||| ||||    
T  19464191 aaaacacaaaaaactatatactccaaattcttatgttttagttttgttaataagtgtg 19464248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 164
Target Start/End: Original strand, 26208030 - 26208188
Alignment:
Q  8 aaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaag 105  Q
    |||||| ||||| |||||||||||   ||||| |||||| |||| ||  |||||||||||||||||||||||||||||| | || |||||| | ||| |     
T  26208030 aaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatcttaccatgaaacttattccagac 26208129  T
Q  106 aaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  26208130 aaaacacaaaaaactatactctaaattcttatgttttagttttcttaataagtgtgatt 26208188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 32619945 - 32619787
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattctttc--attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  ||| ||  | ||| ||||||| |||||||||||||||||| ||||||||||||| |||||||| | |    
T  32619945 taaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatcttcttataaaacctat 32619846  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgtt-ttaattttcttaataa 156  Q
     ||||||||||||||||| | ||||||||||||||| |||||  || ||||||||||||    
T  32619845 tccaaagaaaacacaaaatattatactccaaattctcatgttcatagttttcttaataa 32619787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 156
Target Start/End: Complemental strand, 26725065 - 26724949
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgt 139  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||||  | ||||||| | ||||||||||||||||||| |||||| ||||||||||| |    
T  26725065 attttctccataatcaataaccaatgaaaattgtttttacatcttctcagaaaacttattccaaagaaaacacaaaaaattatacttcaaattcttatat 26724966  T
Q  140 tttaattttcttaataa 156  Q
    |||| ||||||||||||    
T  26724965 tttagttttcttaataa 26724949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34722720 - 34722623
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattc--tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    |||||||||||| |||||| |||||||||||  ||  ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  34722720 taaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttcttataaaactt 34722623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 8097132 - 8096968
Alignment:
Q  2 aaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  |||||||||  ||  ||||||||||| || |||| ||||| |||||||||||| |||||||||||||||||||||||| |     
T  8097132 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 8097033  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||| || ||||||| |||||||  | |||| |  ||||||||| |||||||||||| |||||||    
T  8097032 tcaaggataacacaagaaactatgttgcaaactactatgttttagttttcttaataagtgtgatt 8096968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 164
Target Start/End: Original strand, 47115898 - 47116023
Alignment:
Q  39 cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatg 138  Q
    |||||| ||||||| ||||| |||| |||||||| ||||||||||| | |||||| || | | |||  |||||||||||| ||||||| |||||||||||    
T  47115898 cattttatccataatcaataaccaaagaaaattgcttttacatctttccataaaatttattctaaaacaaacacaaaaaattatactctaaattcttatg 47115997  T
Q  139 ttttaattttcttaataaatgtgatt 164  Q
    ||||| |||| |||||||||||||||    
T  47115998 ttttagtttttttaataaatgtgatt 47116023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 3972286 - 3972402
Alignment:
Q  3 aaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||||  ||  |||| |||||| | | ||| ||||||| ||||||||||||||||||||||||| ||||||||| |      
T  3972286 aaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccataaaacttat-t 3972384  T
Q  101 caaagaaaacacaaaaaa 118  Q
    ||||||||||||||||||    
T  3972385 caaagaaaacacaaaaaa 3972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 3997592 - 3997476
Alignment:
Q  3 aaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||||  ||  |||| |||||| | | ||| ||||||| ||||||||||||||||||||||||| ||||||||| |      
T  3997592 aaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccataaaacttat-t 3997494  T
Q  101 caaagaaaacacaaaaaa 118  Q
    ||||||||||||||||||    
T  3997493 caaagaaaacacaaaaaa 3997476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 8769651 - 8769529
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgt 139  Q
    ||||| ||||||| || |||||||| |||||| |||||||| ||||| || || |||||   ||| ||||||| |||||||||||||| |||| ||||||    
T  8769651 attttctccataatcattagccaataaaaattatttttacaacttcccatgaatcttttt--aaaaaaaacaccaaaaactatactcctaattgttatgt 8769554  T
Q  140 tttaattttcttaataaatgtgatt 164  Q
    |||| |||||||||||| |||||||    
T  8769553 tttagttttcttaataagtgtgatt 8769529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 22479168 - 22479012
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  |||||  |||||| || |||| |||   |||||||||| |||||||||||||||||||||||||| |     
T  22479168 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaacttatt 22479069  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
     |||||| |||||||||||||||  | |||| |  ||||||||| ||||||||||||    
T  22479068 tcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataa 22479012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 33973627 - 33973518
Alignment:
Q  54 caatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaa-aaaactatactccaaattcttatgttttaattttctta 152  Q
    ||||||||| |||||||| |||| || |||| |||||||||||||   ||||||||||||| |||||||||||||||||| |||| ||||| |||| |||    
T  33973627 caatagccactgaaaattattttgacgtctttctataaaactttttttaaagaaaacacaaaaaaactatactccaaatttttatattttagttttgtta 33973528  T
Q  153 ataaatgtga 162  Q
    |||| |||||    
T  33973527 ataagtgtga 33973518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 10114975 - 10115079
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||| || |||||||| |||  | |||| |  ||||||||| |||||||||||| ||    
T  10114975 ccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaaaaattatgttacaaactactatgttttagttttcttaataagtg 10115074  T
Q  160 tgatt 164  Q
    |||||    
T  10115075 tgatt 10115079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 16033067 - 16033005
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    |||||||||||||| ||||  |||| |||||||||||||||||||||||||||||||||||||    
T  16033067 tctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctataaaactt 16033005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 34194926 - 34194988
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  34194926 tctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaactt 34194988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 10014333 - 10014437
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||| || ||||| || |||  | |||| |  ||||||||| |||||||||||| ||    
T  10014333 ccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaacaattatgttacaaactactatgttttagttttcttaataagtg 10014432  T
Q  160 tgatt 164  Q
    |||||    
T  10014433 tgatt 10014437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 10252075 - 10252179
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||| || ||||| || |||  | |||| |  ||||||||| |||||||||||| ||    
T  10252075 ccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaacaattatgttacaaactactatgttttagttttcttaataagtg 10252174  T
Q  160 tgatt 164  Q
    |||||    
T  10252175 tgatt 10252179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 21214305 - 21214412
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaa-ttct--tatgttttaattttcttaataa 156  Q
    ||||||||||||||||||||||||| ||||||||||| |  |||| | |||||||||||||||  | |||| | ||  ||||||||||||||||||||||    
T  21214305 ccaatgaaaattgtttttacatctttctataaaacttatttcaaaaataacacaaaaaactatgttacaaactactactatgttttaattttcttaataa 21214404  T
Q  157 atgtgatt 164  Q
     |||||||    
T  21214405 gtgtgatt 21214412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 46918293 - 46918231
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||||||||| || |||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  46918293 tctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaactt 46918231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 47444087 - 47443927
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  |||||  |||||| || |||| |||   ||| |||||||||||||||||||||| ||||||| || |     
T  47444087 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactaccagtgaaaattgtttttacatcttc-tataaaatttatt 47443989  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
     |||||| |||||||||||||||  | |||| |  ||||||||| |||||||||||||||||    
T  47443988 tcaaagataacacaaaaaactatgttacaaactaatatgttttagttttcttaataaatgtg 47443927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 22456122 - 22455958
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  |||||  |||||| || |||| |||   ||||| ||||||||||||| ||||||||||||||||| |     
T  22456122 aaaattaaatgcaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaacttatt 22456023  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||  |||||||||||||||  | |||| |  ||||||||| |||||||||||  |||||||    
T  22456022 tcaaagttaacacaaaaaactatgttacaaactactatgttttagttttcttaatatttgtgatt 22455958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 30454838 - 30454687
Alignment:
Q  2 aaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  |||||||||  ||  ||||||||||| || |||| ||||| ||||| ||||||||||||||||||| ||||||||||| |     
T  30454838 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctataaaacttatt 30454740  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttctta 152  Q
     ||| || ||||||| |||||||  | |||| |  ||||||||| ||||||||    
T  30454739 tcaaggataacacaagaaactatgttgcaaactactatgttttagttttctta 30454687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 6752681 - 6752764
Alignment:
Q  3 aaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatctt 84  Q
    ||||||||||||||||| ||||| |||  ||  |||| |||||| ||||||| ||||||||||| |||||||||||||||||||    
T  6752681 aaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatctt 6752764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 25242227 - 25242127
Alignment:
Q  65 gaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||| |||||| ||||||||||| |   ||||| |||||||||||||||  | |||| |  ||||||||| |||||||||||| |||||||    
T  25242227 gaaaattgttttttcatctttctataaaacttattttaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataagtgtgatt 25242128  T
Q  165 a 165  Q
    |    
T  25242127 a 25242127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 38401384 - 38401507
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| || ||| |||||||  |||||  |||||| || ||||  ||   |||||||||||| ||||||||||| |||||||||||| |     
T  38401384 aaaattaaatgcaaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttacatctccctataaaacttatt 38401483  T
Q  100 ccaaagaaaacacaaaaaactata 123  Q
     |||||| ||||||||||||||||    
T  38401484 tcaaagataacacaaaaaactata 38401507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 164
Target Start/End: Complemental strand, 46557219 - 46557120
Alignment:
Q  65 gaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaa-ctatactccaaattcttatgttttaattttcttaataaatgtgat 163  Q
    ||||||| |||||||||||||| || |||||| | | ||||||||||||||||| ||||  |  ||||||||||| |||| |||||||||||||||||||    
T  46557219 gaaaattatttttacatcttcccatgaaacttattctaaagaaaacacaaaaaaactatgata-aaattcttatgctttagttttcttaataaatgtgat 46557121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 164
Target Start/End: Complemental strand, 8764744 - 8764629
Alignment:
Q  47 ccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaatt 146  Q
    |||||| || |||||||| |||||| |||||||| ||||| || ||  ||||   ||| |||||||||||| ||||||||| |||| |||||||||| ||    
T  8764744 ccataatcattagccaataaaaattatttttacaacttcccatgaattttttt--aaaaaaaacacaaaaagctatactcctaattgttatgttttagtt 8764647  T
Q  147 ttcttaataaatgtgatt 164  Q
    || ||||||| |||||||    
T  8764646 tttttaataagtgtgatt 8764629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 47867026 - 47866941
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcc 86  Q
    ||||||||||||||||| |||||||||||  ||| |  || ||| ||||||| ||||||||||||||||| |||||||||| ||||    
T  47867026 aaattaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacatattcc 47866941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 54725670 - 54725628
Alignment:
Q  54 caatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  54725670 caataaccaatgaaaattgtttttacatcttcctataaaactt 54725628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 17587779 - 17587867
Alignment:
Q  70 ttgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaat 158  Q
    ||||||||||||||||||||||||||| |  |||  | |||| || |||||||| | ||||||  ||||||||| ||||||||||||||    
T  17587779 ttgtttttacatcttcctataaaacttatttcaagaataacaaaagaaactatattgcaaattactatgttttagttttcttaataaat 17587867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 51309462 - 51309578
Alignment:
Q  46 tccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaat 145  Q
    ||||||| || || ||||| | |||||||| |||||||| |||| |||||| | ||||  | ||||||||||| |||||  |||| |  |||||||| ||    
T  51309462 tccataatcattaaccaataagaattgtttatacatctttctatgaaacttattccaagaagaacacaaaaaattatacctcaaactactatgtttttat 51309561  T
Q  146 tttcttaataaatgtga 162  Q
    |||||||||||||||||    
T  51309562 tttcttaataaatgtga 51309578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 3084256 - 3084141
Alignment:
Q  38 tcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttat 137  Q
    ||||||| |||||||  |||| |||||||| |||||||||||||||||| ||||||||  |   || ||  |||||| ||| |||||| |||||||| ||    
T  3084256 tcattttctccataacaaataaccaatgaatattgtttttacatcttcccataaaactaattttaaggaggacacaagaaattatacttcaaattctcat 3084157  T
Q  138 gttttaattttcttaa 153  Q
     ||||| |||||||||    
T  3084156 attttagttttcttaa 3084141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 7886697 - 7886638
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaa 93  Q
    ||||||||||| || ||||  |||| ||||||||||||||||||||||||| ||||||||    
T  7886697 tctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctataaaa 7886638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 38674881 - 38674959
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttac 79  Q
    ||||||||| ||||||| |||||||||||  |||  |||||||| | ||||| |||||| |||||||||||||||||||    
T  38674881 aaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttac 38674959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 46557314 - 46557237
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgttttta 78  Q
    |||||||||| |||||| ||| |||||||  |||  ||||||||||||||||  ||||||||||||||||| ||||||    
T  46557314 aaattaaatgtaaattacatttaattttctctctctttcattttttccataactaatagccaatgaaaattattttta 46557237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33974674 - 33974614
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcat--tctttcattttttccataaacaatag 59  Q
    ||||||||||||||||||| ||| ||||||| |  ||||||||||||||||||| ||||||    
T  33974674 taaaattaaatgcaaattacattaaattttctttctctttcattttttccataaccaatag 33974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 6784390 - 6784450
Alignment:
Q  62 aatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    |||||||||| ||||||||||||||||||||| || |   ||||| |||||||||||||||    
T  6784390 aatgaaaattatttttacatcttcctataaaatttatttgaaagataacacaaaaaactat 6784450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 55400740 - 55400903
Alignment:
Q  1 taaaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||  |||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  55400740 taaaattaaatgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 55400839  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
     ||||||| ||||||||||| |||||  |||||   || || ||| |||||||||||| |||||    
T  55400840 tccaaagagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtga 55400903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 30612221 - 30612276
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaact 95  Q
    ||||||||||||| || || ||||||| ||||||||||||||||| |||| |||||    
T  30612221 attttttccataatcattaaccaatgagaattgtttttacatctttctatgaaact 30612276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 31292670 - 31292777
Alignment:
Q  55 aatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaat 154  Q
    |||| ||||||||||||||||||||||||||| ||| ||||  | |||| || |||| || ||| |||||| ||||||   |||||||| |||| | |||    
T  31292670 aataaccaatgaaaattgtttttacatcttcccatagaactaattccaaggagaacaaaagaaattatacttcaaattaccatgttttagttttttcaat 31292769  T
Q  155 aaatgtga 162  Q
    || |||||    
T  31292770 aagtgtga 31292777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 47866921 - 47866874
Alignment:
Q  117 aactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||||||||| | || ||||||| |||||||    
T  47866921 aactatactccaaattcttatgttttagtctttttaataagtgtgatt 47866874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 31126275 - 31126377
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||||||||| |||||||||||| | ||||||||| |  ||| || ||||||||||| |||||  |||||   || || ||| |||||||||||| ||    
T  31126275 ccaatgaaaattatttttacatctttccataaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtg 31126374  T
Q  160 tga 162  Q
    |||    
T  31126375 tga 31126377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 2878212 - 2878253
Alignment:
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttt 141  Q
    ||||||| |||||||||||||||| || ||||||||||||||    
T  2878212 ccaaagataacacaaaaaactatattctaaattcttatgttt 2878253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 48291886 - 48291922
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    |||||||||||| |||||||| |||||||||||||||    
T  48291886 ccaatgaaaattatttttacaccttcctataaaactt 48291922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 9e-61; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 3201331 - 3201496
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||  | |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  3201331 taaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 3201430  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| |||||||    
T  3201431 tccaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgtgatt 3201496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 35517128 - 35517293
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||||    
T  35517128 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctcactataaaactttt 35517227  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  35517228 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 35517293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 6110356 - 6110189
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct----ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||||||||||||||||| |||||||||||  |||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6110356 taaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 6110257  T
Q  97 ttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    || || ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||    
T  6110256 tttccgaagaaaacacaaaaagctatactccaaattcttatgttttagttttcttaataagtgtgatt 6110189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 28599303 - 28599146
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||| |||| |||||||||||   |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  28599303 taaaattaaatgcatattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaatctttt 28599204  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28599203 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 28599146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45085262 - 45085427
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  |||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||    
T  45085262 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggctaatgaaaattgtttttacatcttcctataaaactttt 45085361  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45085362 ttcaaagaaaatacaaaaaactatactccaaattcttatgttttaattttcttaataagtgtgatt 45085427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19264104 - 19264270
Alignment:
Q  1 taaaattaaatgcaaa-ttatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttt 97  Q
    |||||||||||||||| ||| |||||||||||  |||  || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19264104 taaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 19264203  T
Q  98 tcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    | ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||    
T  19264204 ttccaaagaaaacacaaaaaattatactctaaattcttatgttttagttttcttaataagtgtgatt 19264270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45660370 - 45660538
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| ||||||  |  ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45660370 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 45660469  T
Q  99 cccaaagaaaacacaaaaaactatactccaa---attcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  45660470 ttcaaagaaaacacaaaaaactatactccaaattattcttatgttttagttttcttaataaatgtgatt 45660538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 41528261 - 41528427
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    |    
T  41528261 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaaat 41528360  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatg-ttttaattttcttaataaatgtgatt 164  Q
      ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  41528361 ttcaaagaaaacacaaaaaactatacttcaaattcttatgtttttaattttcttaataagtgtgatt 41528427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 11617029 - 11617194
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||| |||||||||||  |||||||||||  |||  || |||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11617029 taaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 11617128  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11617129 ttcaaagaaaataccaaaaactatactccaaattcttatgttttaattttcttaataagtgtgatt 11617194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 9864870 - 9864708
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    ||||||||||||||||| ||||||||||   |||| |||||| ||||||| |||| ||||||||||||||||||||| |||||| || |||||| | |||    
T  9864870 aaattaaatgcaaattacattcaattttatctcttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccatgaaacttattcca 9864771  T
Q  103 aagaaaacacaa-aaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  9864770 aagaaaacacaaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatt 9864708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 12938249 - 12938413
Alignment:
Q  3 aaattaaatgcaaattatattca-attt-tcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||||| |||| ||  ||||| ||||| ||||||| |||||||||||||||||||||||||||  |||||||||||||| |      
T  12938249 aaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacactttcctataaaacttattt 12938348  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatta 165  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  12938349 caaagaaagcacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatta 12938413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 24204680 - 24204519
Alignment:
Q  5 attaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    |||||||| ||||||||||||||||||  ||| |  |||||| | ||||| ||||||||||||||||||| |||||||| |||||||||||||| | |||    
T  24204680 attaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcctataaaacttattcca 24204581  T
Q  103 aagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||| ||| ||||||||||||||||| |||||| ||||||| ||||||||||||    
T  24204580 aagaaaacacaataaattatactccaaattcttaggttttagttttcttgataaatgtgatt 24204519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 25572053 - 25572215
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccc 101  Q
    ||||||||||||||||| ||| |||||||  ||| |||  ||||||||||| ||||| ||||||||||||||||||||||||||| || |||||| | ||    
T  25572053 aaattaaatgcaaattacatttaattttctctctcttccatttttccataaccaatatccaatgaaaattgtttttacatcttcccatgaaacttattcc 25572152  T
Q  102 aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||||||||||||| || |||||||||||| |||| |||||||||||| |||||||    
T  25572153 aaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtgatt 25572215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 33198783 - 33198624
Alignment:
Q  4 aattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccc 101  Q
    |||||||||||||||| |||||||||||  |||  |||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||| |       
T  33198783 aattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctataaaacttctttt 33198684  T
Q  102 aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtg 161  Q
    |||||||||||||||||||| | ||||||||||||| ||||| |||||||||||| ||||    
T  33198683 aaagaaaacacaaaaaactagagtccaaattcttatattttagttttcttaataagtgtg 33198624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 6766087 - 6765923
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttc--attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    |||||||||| |||||| |||||||||||  ||| |||   |||||||||||| |||||| |||| |||||||||||||||||||||||||||| || |     
T  6766087 aaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatcttcctataaaatttatt 6765988  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  6765987 ccaatgaaaacataaaaaactatacttcaaatttttatgttttaattttcttaataagtgtgatt 6765923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 29524194 - 29524031
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||| |||||||  |||  || ||||||||||||| |||| |||||||||||||||||||||||||||| || |||||| | |    
T  29524194 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattc 29524095  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||||||| ||| || |||||||||||| |||| ||||| |||||| |||||||    
T  29524094 caaagaaaacacaaaaaattatgctacaaattcttatgctttagttttcataataagtgtgatt 29524031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 14873975 - 14874105
Alignment:
Q  8 aaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaag 105  Q
    |||||||||||| ||| ||||||  |  ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||    
T  14873975 aaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttcctataaaacttttttcaaag 14874074  T
Q  106 aaaacacaaaaaactatactccaaattctta 136  Q
    ||||||||||||||||||||||||| |||||    
T  14874075 aaaacacaaaaaactatactccaaactctta 14874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28858314 - 28858482
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| |||||||||||  |||  ||||||||| | |||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  28858314 taaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttctataaaactttt 28858413  T
Q  99 cccaaagaaaacacaaaaaacta---tactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||||||   || |  |||||||||||||||| |||||||||||  |||||||    
T  28858414 ttcaaagaaaacacaaaaaactactatattttaaattcttatgttttagttttcttaatatgtgtgatt 28858482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 34 - 156
Target Start/End: Original strand, 8701642 - 8701764
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattc 133  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||| || |||||| | |||||||||||| |||||||||| || ||||||     
T  8701642 tcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacataaaaaactatgctacaaattt 8701741  T
Q  134 ttatgttttaattttcttaataa 156  Q
    |||||||||| ||||||||||||    
T  8701742 ttatgttttagttttcttaataa 8701764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 35022904 - 35023066
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaata--gccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||||||| ||||||||||||  ||| |  |||||| ||| |||||||||  || |||||||||||||||||||||||||||| ||||||      
T  35022904 aaattaaatgcaaattgtattcaattttctctctctaccattttctccttaaacaatatagcaaatgaaaattgtttttacatcttcctatgaaacttac 35023003  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
     ||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||    
T  35023004 tccaaa-aaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 35023066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 35115924 - 35115793
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt-ttcccaaagaaaacacaaaaaactatactccaaatt 132  Q
    |||| |||||| ||||||| ||||| | ||||||||||||||||||||||| ||||||||||| ||   ||| |||||||||||||||||||||||||||    
T  35115924 tcttccattttctccataaccaataacaaatgaaaattgtttttacatctttctataaaacttattaaaaaaaaaaacacaaaaaactatactccaaatt 35115825  T
Q  133 cttatgttttaattttcttaataaatgtgatt 164  Q
    ||||||||||| || ||||||||| |||||||    
T  35115824 cttatgttttagttctcttaataagtgtgatt 35115793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 25 - 164
Target Start/End: Complemental strand, 40808848 - 40808710
Alignment:
Q  25 aattttcattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatac 124  Q
    |||||||  ||||| ||||||||| ||| |||| || ||||||||||||||||||||||||| || |||||| | ||||||||||||||||||||||| |    
T  40808848 aattttctctcttttattttttccctaaccaattgctaatgaaaattgtttttacatcttcc-atgaaacttattccaaagaaaacacaaaaaactatgc 40808750  T
Q  125 tccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    | |||||||||||| |||| |||||||||||| |||||||    
T  40808749 tacaaattcttatgctttagttttcttaataagtgtgatt 40808710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 43415468 - 43415571
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgt 160  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||| ||||||||||| ||||| |||||||| ||| |||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttagtaagtgt 43415567  T
Q  161 gatt 164  Q
    ||||    
T  43415568 gatt 43415571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 164
Target Start/End: Complemental strand, 7645342 - 7645217
Alignment:
Q  39 cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatg 138  Q
    |||||| |||||||  ||||||||||||||||||||||||||| |||| || ||| || | | || |||||||||||| | |||||||||||||||||||    
T  7645342 cattttctccataattaatagccaatgaaaattgtttttacatgttcccatgaaatttattctaaggaaaacacaaaatattatactccaaattcttatg 7645243  T
Q  139 ttttaattttcttaataaatgtgatt 164  Q
    ||||| |||||||||||| |||||||    
T  7645242 ttttagttttcttaataagtgtgatt 7645217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 33677490 - 33677645
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttcattttt-tccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||| ||| | ||||||||||| |||| |||| |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||        
T  33677490 aaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaacttagta 33677589  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
     ||| |||||| |||||||||| || |||||| |||||||||| ||||| ||||||    
T  33677590 aaaaaaaaacataaaaaactattcttcaaatttttatgttttagttttcgtaataa 33677645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 5963210 - 5963362
Alignment:
Q  5 attaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccca 102  Q
    ||||||||||||||| |||||||||||  ||| |  |||||| | ||||| ||||||||||| |||||| ||||||||||| || ||||||||| | | |    
T  5963210 attaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatctccc-ataaaacttattcta 5963308  T
Q  103 aagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    |||||||||||||||| || |||| |||||||||| ||||| ||||||||||||    
T  5963309 aagaaaacacaaaaaattagactctaaattcttatattttagttttcttaataa 5963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 44454998 - 44455159
Alignment:
Q  3 aaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||||||||||  |  |||| |||||| || |||| ||||||||||||||  || ||||||| | |||| || |||||| | |    
T  44454998 aaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaatgaa--ttttttttacgttttcccatgaaacttattc 44455095  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||| |||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||    
T  44455096 aaaataaaacacaaaaaactatactccaaattcatatattttagttttcttaataaatatgatt 44455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 30830749 - 30830590
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| || ||||||||  |||||  |||||| || |||| ||||| ||||||||| || |||||| ||||||  || |||||| |      
T  30830749 aaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcatgaaacttattt 30830650  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgt 160  Q
    |||| ||||||||||||   ||||||||| ||||||||||||||||||||||||||||||    
T  30830649 caaaaaaaacacaaaaagacatactccaatttcttatgttttaattttcttaataaatgt 30830590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 40584551 - 40584436
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||||||  |||  ||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||||| | |    
T  40584551 aaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttcccataaaacttattc 40584452  T
Q  101 caaagaaaacacaaaa 116  Q
     |||||||||||||||    
T  40584451 taaagaaaacacaaaa 40584436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 26998323 - 26998487
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  |||||  |||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| |     
T  26998323 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 26998422  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      ||||| |||||||||||||||  | |||| |   |||||||| ||||||||||||||||||||    
T  26998423 ttaaagataacacaaaaaactatcttacaaactaccatgttttagttttcttaataaatgtgatt 26998487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 32010168 - 32010270
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||||||||| |||||||||||||||||||||||| |  |||||| |||||||||||||||| | |||| |  ||||| ||| |||||||||||| ||    
T  32010168 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaaactatattacaaactactatgtattagttttcttaataagtg 32010267  T
Q  160 tga 162  Q
    |||    
T  32010268 tga 32010270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 4891733 - 4891627
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaa-aaaactatactccaaattcttatgttttaattttcttaataaat 158  Q
    ||||| ||||||||||||||||||||||||||||||| |  |||||| ||||||| ||||||||  | |||| |  ||| ||||| ||||||||||||||    
T  4891733 ccaataaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaaactatgttacaaactactatattttagttttcttaataaat 4891634  T
Q  159 gtgatta 165  Q
    |||||||    
T  4891633 gtgatta 4891627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 161
Target Start/End: Original strand, 4707482 - 4707585
Alignment:
Q  55 aatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaat 154  Q
    |||| ||||||||||||||||| |||||||||  | |||||| | | || ||||||||||||||||||||||||||   | |||||||| | ||||||||    
T  4707482 aataaccaatgaaaattgttttaacatcttcccgttaaacttattctaaggaaaacacaaaaaactatactccaaa---tcatgttttagtgttcttaat 4707578  T
Q  155 aaatgtg 161  Q
    |||||||    
T  4707579 aaatgtg 4707585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 38071061 - 38071157
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    |||||||||||||||||||||||||||| |||||||| |  |||||| |||||||||||||||  | |||| |   |||||||| ||||||||||||    
T  38071061 ccaatgaaaattgtttttacatcttcctgtaaaacttatttcaaagataacacaaaaaactatgttacaaactaccatgttttagttttcttaataa 38071157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 32273737 - 32273799
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    ||||||||||||||||||| ||||||||||||||||| |  |||||| |||||||||||||||    
T  32273737 ccaatgaaaattgtttttatatcttcctataaaacttatttcaaagataacacaaaaaactat 32273799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 32428019 - 32428144
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt-ttcccaaagaaaacacaaaaaactatactccaaattcttatg 138  Q
    ||||| ||| ||| |||||| ||||||||||| ||||||||| || | || |||||| ||   ||| ||||||| ||  |||||||||||||||||||||    
T  32428019 attttctccgtaatcaatagtcaatgaaaattatttttacatgtttccatgaaacttattataaaaaaaaacaccaaggactatactccaaattcttatg 32428118  T
Q  139 ttttaattttcttaataaatgtgatt 164  Q
    ||||| |||| ||||||||| |||||    
T  32428119 ttttagtttttttaataaatatgatt 32428144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 9709553 - 9709641
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactat 122  Q
    ||||||||||| || |||| ||||| | ||||||||||||||| ||||||||||||||||||| |  ||| || ||||||| |||||||    
T  9709553 tctttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctataaaacttgtttcaaggataacacaagaaactat 9709641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 8032762 - 8032702
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaact 120  Q
    ||||| |||||||||||||||||||||||||||||||  | |||| | |||||||||||||    
T  8032762 ccaataaaaattgtttttacatcttcctataaaacttaacacaaaaataacacaaaaaact 8032702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 11825438 - 11825349
Alignment:
Q  71 tgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
    |||||||||||||| | || |||||| | |||||||||||||||     |||| || |||||||||||||||| |||||||||||| |||||||    
T  11825438 tgtttttacatctttccatgaaacttattccaaagaaaacacaat----tatattcaaaattcttatgttttagttttcttaataagtgtgatt 11825349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 5280595 - 5280536
Alignment:
Q  90 aaaacttttcccaaagaaaacacaaaaaa-ctatactccaaattcttatgttttaatttt 148  Q
    ||||||||| || |||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  5280595 aaaactttttcccaagaaaacacaaaaaaactatagtccaaattcttatgttttagtttt 5280536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 16495019 - 16494984
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaactt 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  16495019 caatgaaaattgtttttacatcttcctataaaactt 16494984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 30421337 - 30421238
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| ||| |||||||   ||||||||||||||  | ||  ||||  | || |||||||||||||||||||| ||||||||||||    
T  30421337 taaaattaaatgtaaattacatttaattttctctttctttcatttttttaaaaattaataatcgataaaaattgtttttacatcttcttataaaactttt 30421238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 5280627 - 5280592
Alignment:
Q  34 tctttcattttttccataaacaatagccaatgaaaa 69  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5280627 tctttcattttttccataaccaatagccaatgaaaa 5280592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 20380129 - 20380251
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattc--tttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  ||  ||||||||| || |||| |||   ||||||||  || ||||||||| |||||||||||||| |     
T  20380129 aaaattaaatgcaaagtgcattcaatttgctctcgttttcattttctctataatcaactaccaatgaattttttttttacattttcctataaaacttatt 20380228  T
Q  100 ccaaagaaaacacaaaaaactat 122  Q
     |||||| |||||||||||||||    
T  20380229 tcaaagataacacaaaaaactat 20380251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 33933010 - 33932915
Alignment:
Q  67 aaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtga 162  Q
    ||||||| |||||||||| |||||||||||   ||||  | || |||||||| |||||| |||| |  ||||||||| |||||||||||| |||||    
T  33933010 aaattgtgtttacatctttctataaaacttaatccaagaataatacaaaaaattatactacaaaatactatgttttagttttcttaataagtgtga 33932915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 44803960 - 44804062
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    ||||||| |||| |||||||||||| | || |||||| | |||| || ||||||||||| |||||  |||||   || || |||||||||||||||| ||    
T  44803960 ccaatgagaattatttttacatctttccattaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtg 44804059  T
Q  160 tga 162  Q
    |||    
T  44804060 tga 44804062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 39696952 - 39696877
Alignment:
Q  3 aaattaaatgcaaattatattcaattt--tcattctttcattttttccataaacaatagccaatgaaaattgtttt 76  Q
    ||||||||||||||||| ||| |||||  || ||||| |||||| || || | ||||||| |||||||||||||||    
T  39696952 aaattaaatgcaaattacatttaattttctctttcttccattttctctatgatcaatagctaatgaaaattgtttt 39696877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 44442198 - 44442230
Alignment:
Q  61 caatgaaaattgtttttacatcttcctataaaa 93  Q
    ||||||||||||||||||||||||| |||||||    
T  44442198 caatgaaaattgtttttacatcttcatataaaa 44442230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 729 - 565
Alignment:
Q  1 taaaattaaatgcaaattatattcaatttt--cattctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||||||||||  | |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  729 taaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttt 630  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgat 163  Q
      ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  629 ttcaaagaaaacacataaaactatactccaaattcttatgttttagttttcttaataagtgtgat 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 77962 - 78127
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||||| |||||| ||||||||||||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||    
T  77962 taaaattaaatgtaaattacattcaattttcactttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctatacaactttt 78061  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  78062 ttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttttcttaataagtgtgatt 78127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 10053 - 10207
Alignment:
Q  4 aattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccc 101  Q
    |||||||||||||||| |||||||||||  |||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |     
T  10053 aattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttttct 10152  T
Q  102 aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  10153 aaagaaaacacaaaaaactacattccaaattcttatgttttaattttcttaataa 10207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 44927 - 44762
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| |||||||  |||  |||||||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||    
T  44927 taaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttttaatattcctataaaactttt 44828  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  44827 tccaaagaaaacacaaaaaaatatactccaaattattatgttttagttttcttaataaatgtgatt 44762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 3581 - 3447
Alignment:
Q  4 aattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttccc 101  Q
    |||||||||||||||| |||||||||||  |||  |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |     
T  3581 aattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttca 3482  T
Q  102 aaagaaaacacaaaaaactatactccaaattctta 136  Q
    |||||||||||||||||||||||||||||||||||    
T  3481 aaagaaaacacaaaaaactatactccaaattctta 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 154866 - 155024
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcatt--ctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    ||||||||||||||||||| ||| |||||||  |  |||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  154866 taaaattaaatgcaaattacattaaattttctctatctttcattttttccataaccaatagccaatgtaaattgtttttacatctttctataaaactttt 154965  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaat 158  Q
      ||||||||| || |||||||||| | || |||||||||||||| ||||||||||||||    
T  154966 ttcaaagaaaatac-aaaaactatatttcagattcttatgttttagttttcttaataaat 155024  T

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Target: scaffold0009 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 157801 - 157956
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| ||| |||||||  |||  || ||||||||||||| |||| ||||||||||||||||||||||||| || || |||||| | |    
T  157801 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccatgaaacttattc 157900  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataa 156  Q
    |||||||||||||||||||||| || |||||||||||| |||| ||||||||||||    
T  157901 caaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataa 157956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 52756 - 52593
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct-ttc-attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||| ||||| ||| |||||||  ||| ||| ||||| ||||||| |||||| ||||||||||||||||||||| || | || |||||| |      
T  52756 aaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacatatttccatcaaacttat-- 52659  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttatgttt---taattttcttaataaatgtgatt 164  Q
     ||| ||| |||||||||   ||||| |||||||||| |||   ||||||| |||||||||||||||    
T  52658 taaaaaaatcacaaaaaa-actactctaaattcttatattttactaattttattaataaatgtgatt 52593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 1017 - 1182
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcat--tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||| |||||||| ||| |||||||    ||||||||||||||||||| |||||  ||||||||| |||||||||||||| |||||||||||||    
T  1017 taaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctataaaactttt 1116  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
       ||| ||||||||||||||||||||||||||| |||| ||||| ||||  ||||||||||||||    
T  1117 ttaaaaaaaaacacaaaaaactatactccaaatttttatattttagtttttataataaatgtgatt 1182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 8977 - 9142
Alignment:
Q  1 taaaattaaatgcaaattatattcaattttcat--tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 98  Q
    |||||||||| |||||||| ||| |||||||    ||||||||||||||||||| |||||  ||||||||| |||||||||||||| |||||||||||||    
T  8977 taaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctataaaactttt 9076  T
Q  99 cccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
       ||| ||||||||||||||||||||||||||| |||| ||||| ||||  ||||||||||||||    
T  9077 ttaaaaaaaaacacaaaaaactatactccaaatttttatattttagtttttataataaatgtgatt 9142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 40186 - 40321
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattct--ttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||| ||||  |||  | ||||||||| |||| ||||||||||||||||||||||||||| ||| |||||||| || | |    
T  40186 aaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttctataaaatttattc 40285  T
Q  101 caaagaaaacacaaaaaactatactccaaattcttat 137  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  40286 caaagaaaacacaaaaagctatact-caaattcttat 40321  T

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Target: scaffold0565 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 6030 - 5866
Alignment:
Q  2 aaaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttc 99  Q
    ||||||||||||||| |  ||||||||| |  |||||  ||||||||| |||| |||    ||| |||||||||||||||||||||||||||||||| |     
T  6030 aaaattaaatgcaaagtgcattcaatttactctctttttcattttttctataatcaactatcaaggaaaattgtttttacatcttcctataaaacttatt 5931  T
Q  100 ccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     ||| || |||||||||||||||| | |||| |  |||||||||||||||||||||| |||||||    
T  5930 tcaatgataacacaaaaaactatattacaaactactatgttttaattttcttaataagtgtgatt 5866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 3234 - 3338
Alignment:
Q  60 ccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataaatg 159  Q
    |||||| |||||||||||| ||||||||||||||||| |  |||||| |||||||||||||||  | |||| |  |||||||||||||||||||||| ||    
T  3234 ccaatggaaattgtttttagatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatgttttaattttcttaataagtg 3333  T
Q  160 tgatt 164  Q
    |||||    
T  3334 tgatt 3338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 160257 - 160376
Alignment:
Q  3 aaattaaatgcaaattatattcaattttca--ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    |||||||||  |||||| |||||||||||   ||||| ||||||| |||||| |||||||||||||||| || ||||||||||||| || ||  || | |    
T  160257 aaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatcttcccatgaattttattc 160356  T
Q  101 caaagaaaacacaaaaaact 120  Q
    ||||||||||||||||||||    
T  160357 caaagaaaacacaaaaaact 160376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 161041 - 160910
Alignment:
Q  33 ttctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaatt 132  Q
    |||||||||||| || ||||  |||| ||||||||||||||||||||| ||| |||| |||||| |  ||| || ||||||| |||||||  | |||| |    
T  161041 ttctttcattttctcaataacaaataaccaatgaaaattgtttttacaactttctatcaaacttatttcaaggataacacaagaaactatgttgcaaact 160942  T
Q  133 cttatgttttaattttcttaataaatgtgatt 164  Q
      |||||||||||||||||||||| |||||||    
T  160941 actatgttttaattttcttaataagtgtgatt 160910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 233641 - 233478
Alignment:
Q  3 aaattaaatgcaaattatattcaattttcattcttt--cattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcc 100  Q
    ||||||||||||||||| |||||||| ||| ||| |  |||||| |   ||| | ||||||||||||||| ||||||||||||||| || |||||| |      
T  233641 aaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaat-gtttttacatcttcccatgaaacttattt 233543  T
Q  101 caaagaaaa-cacaaaaaactatactccaaattcttatgttttaattttcttaataaatgtgatt 164  Q
     |||||||| |||||| |||||||    |||||||||| ||||| ||||||||||||||||||||    
T  233542 taaagaaaaacacaaataactatatattaaattcttatattttagttttcttaataaatgtgatt 233478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 893 - 997
Alignment:
Q  40 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaattcttatgt 139  Q
    ||||| ||||||| |||||| ||||||||||| |||||| ||||| ||||||||||| | ||||||         ||||||||||| |||||||||||||    
T  893 attttctccataaccaatagtcaatgaaaattatttttatatctttctataaaacttattccaaag---------aaaactatacttcaaattcttatgt 983  T
Q  140 tttaattttcttaa 153  Q
    ||||||||| ||||    
T  984 tttaatttttttaa 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1157 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 1767 - 1690
Alignment:
Q  55 aatagccaatgaaaattgtttttacatcttcctataaaacttttcccaaagaaaacacaaaaaactatactccaaatt 132  Q
    |||| |||||||||| |||||||||||||||| || |||||  | |||| |||||||||| ||| |||| ||||||||    
T  1767 aataaccaatgaaaaatgtttttacatcttcccatgaaactaattccaaggaaaacacaataaattataatccaaatt 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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