View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19520_low_60 (Length: 291)
Name: NF19520_low_60
Description: NF19520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19520_low_60 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 41697112 - 41697375
Alignment:
| Q |
9 |
gaagaatatggctaggtatctgtcagtaattatatgcagtgttaattcaatatatgaacgagggtgcgagcgtgtgtgtgtg----ggataaaacaagac |
104 |
Q |
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| T |
41697112 |
gaagaaaatggctaggtatctgtcagtaattatatgcagtgttaattcaatatatgaacgagggtgcgtgtgtgtgtgtgtgtgggggataaaacaagac |
41697211 |
T |
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| Q |
105 |
ttgtattttctgaaaaacttacctgattaatatgtaggtgacgatacatgtttgcatggaagaaaggtgtttctccaacctcgtgaattgaaattcgctt |
204 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
41697212 |
ttgtattttctgaaaaacttacctgattaatatgtaggtgacggtacatgtttgcatggaagaaaggcgtttctccaacctcgtgaattgaaattcgctt |
41697311 |
T |
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| Q |
205 |
tttggatgcagtttcaacattaacaatcctacgagtacttatttcaattaggttataagaatgc |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41697312 |
tttggatgcagtttcaacattaacaatcctacgagtacttatttcaattaggttataagaatgc |
41697375 |
T |
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