View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19520_low_79 (Length: 235)
Name: NF19520_low_79
Description: NF19520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19520_low_79 |
 | |
|
| [»] chr7 (29 HSPs) |
| |
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| [»] chr4 (3 HSPs) |
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|
| [»] chr1 (3 HSPs) |
| |
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| [»] chr8 (2 HSPs) |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 27830569 - 27830798
Alignment:
| Q |
6 |
acaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaa |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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|
| T |
27830569 |
acaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagatcgcggaggcatatttgcaatcaccggttaa |
27830668 |
T |
|
| Q |
106 |
gaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27830669 |
gaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggccttaatgttatgcggataata |
27830768 |
T |
|
| Q |
206 |
agcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
27830769 |
agcgagcctactgctgcagctattgcatat |
27830798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 235
Target Start/End: Complemental strand, 8659837 - 8659608
Alignment:
| Q |
6 |
acaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaa |
105 |
Q |
| |
|
||||| |||||||||| ||||| |||||||||||||| ||||| ||||| |||||||| |||||||| |||| ||| ||||| | ||||| || || |
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|
| T |
8659837 |
acaagggtcaggagaagcacttttgtgcggaggaaatatcatctatggtacttacaaaaatgcgagaagttgcagagacatatctaatgtcacctgtgaa |
8659738 |
T |
|
| Q |
106 |
gaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataata |
205 |
Q |
| |
|
|||||| || | || ||||| || || |||||||| ||||| ||||||||||| |||||||||||||||||||||| |||||||| || | |||||| |
|
|
| T |
8659737 |
gaatgctgttgttacagtgcctgcatagttcaatgattctcagcgaaaagccaccatagattccggtgccattgctggccttaatgtcattcagataatt |
8659638 |
T |
|
| Q |
206 |
agcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
| || |||||||||||||||||||||||| |
|
|
| T |
8659637 |
aatgaacctactgctgcagctattgcatat |
8659608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 10494068 - 10494297
Alignment:
| Q |
6 |
acaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaa |
105 |
Q |
| |
|
||||| |||| ||||| ||||| ||||| |||||||| ||||| |||||||||| ||||||||||||| |||| |||||||||||| ||||| || || |
|
|
| T |
10494068 |
acaagggtcaagagaagcacttttgtgccgaggaaatatcatctatggtccttataaagatgcgagaggttgcagaggcatatttggggtcaccagtcaa |
10494167 |
T |
|
| Q |
106 |
gaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataata |
205 |
Q |
| |
|
|||||| || | || ||||| ||||| ||||| || ||||||||||| || ||| | ||| | ||||| |||||||| |||||||| || |||||||| |
|
|
| T |
10494168 |
gaatgctgttgttactgtgccggcttacttcaacgattctcaacgaaaggctactattgatgctggtgctattgctggccttaatgtcattcggataatc |
10494267 |
T |
|
| Q |
206 |
agcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
| || |||||||||||||||||||||||| |
|
|
| T |
10494268 |
aatgaacctactgctgcagctattgcatat |
10494297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 8671347 - 8671553
Alignment:
| Q |
29 |
tgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccag |
128 |
Q |
| |
|
||||| |||||||| || || ||||| |||||||||||||||||| |||||||||||||| || | |||||||| |||||||| || | |||||||||| |
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|
| T |
8671347 |
tgtgctgaggaaatatcttctatggtgcttacaaagatgcgagaggttgcggaggcatatctggagtcaccggtcaagaatgccgttgttaccgtgccag |
8671446 |
T |
|
| Q |
129 |
cttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagctat |
228 |
Q |
| |
|
|||| |||||||| ||||| |||| ||||| | ||| | ||| | |||||||| |||||||| || |||||||| | || ||||||||||||||||| |
|
|
| T |
8671447 |
cttacttcaatgattctcagcgaacggccaccattgatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgctgcagctat |
8671546 |
T |
|
| Q |
229 |
tgcatat |
235 |
Q |
| |
|
||||||| |
|
|
| T |
8671547 |
tgcatat |
8671553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 235
Target Start/End: Complemental strand, 8667893 - 8667664
Alignment:
| Q |
6 |
acaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaa |
105 |
Q |
| |
|
||||| |||| ||||| ||||| ||||| |||||||| || || ||||| |||||||||||||||||| |||||||||||||| || || ||||| || |
|
|
| T |
8667893 |
acaagggtcaagagaagcacttttgtgctgaggaaatatcttctatggtgcttacaaagatgcgagaggttgcggaggcatatctggggtcgccggtcaa |
8667794 |
T |
|
| Q |
106 |
gaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataata |
205 |
Q |
| |
|
|||||| || | || ||||||||||| |||||||| ||||| ||||| ||||| ||||| | ||| | |||||||| |||||||| || |||||||| |
|
|
| T |
8667793 |
gaatgccgttgttactgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggacttaatgtcattcggataatc |
8667694 |
T |
|
| Q |
206 |
agcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
| || |||||||| ||||||||||||||| |
|
|
| T |
8667693 |
aatgaacctactgcggcagctattgcatat |
8667664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 235
Target Start/End: Original strand, 13333151 - 13333379
Alignment:
| Q |
7 |
caagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaag |
106 |
Q |
| |
|
|||| |||| ||||| ||||| ||||| |||||||| ||||| |||||||||||||||||||||||| |||| ||||||||| || ||||| || ||| |
|
|
| T |
13333151 |
caagggtcaagagaagcacttttgtgccgaggaaatatcatctatggtccttacaaagatgcgagaggttgcagaggcatatatggggtcaccagtcaag |
13333250 |
T |
|
| Q |
107 |
aatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataa |
206 |
Q |
| |
|
||||| || | || ||||| ||||| |||||||| ||||| ||||| ||||| ||||| | ||||| |||||||| |||||| | || || ||||| | |
|
|
| T |
13333251 |
aatgccgttgttactgtgccggcttacttcaatgattctcagcgaaaggccaccatagatgctggtgctattgctggccttaatatcattcgaataatca |
13333350 |
T |
|
| Q |
207 |
gcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
13333351 |
atgaacctactgctgcagctattgcatat |
13333379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 235
Target Start/End: Complemental strand, 8629006 - 8628777
Alignment:
| Q |
6 |
acaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaa |
105 |
Q |
| |
|
||||| |||| ||||| || ||||||| |||||||| ||||| || ||||| |||| ||| ||||||| ||||| |||||| ||||||| || || |
|
|
| T |
8629006 |
acaagggtcaagagaagaacctatgtgctgaggaaatatcatctattatccttgcaaatatgaagaagattgcagaggcttatttgaaatcacctgtaaa |
8628907 |
T |
|
| Q |
106 |
gaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataata |
205 |
Q |
| |
|
|||||||| | |||||||| |||||||||||||| ||||| ||||||||||| | || | |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
8628906 |
aaatgcagttgtcaccgtgcctgcttatttcaatgattctcagcgaaaagccaccatgaatgctggtgccattgctggccttaatgttatgaggataatc |
8628807 |
T |
|
| Q |
206 |
agcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
| || || ||||||||||||||||||||| |
|
|
| T |
8628806 |
aatgaccccactgctgcagctattgcatat |
8628777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 235
Target Start/End: Original strand, 8585421 - 8585629
Alignment:
| Q |
27 |
tatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgcc |
126 |
Q |
| |
|
||||||| |||||||| ||||| || |||| ||||| ||| ||||||| ||| |||||||| ||||||| ||| | |||||||| | || ||||| |
|
|
| T |
8585421 |
tatgtgctgaggaaatatcatctatcatcctcacaaacatgaagaagattgcagagacatatttgaaatcacctgttcaaaatgcagttgtgactgtgcc |
8585520 |
T |
|
| Q |
127 |
agcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagct |
226 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| | ||| | |||||||||||||| |||||||||||| ||||||| | || || |||||||||||| |
|
|
| T |
8585521 |
tgcttatttcaatgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagct |
8585620 |
T |
|
| Q |
227 |
attgcatat |
235 |
Q |
| |
|
||||||||| |
|
|
| T |
8585621 |
attgcatat |
8585629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 235
Target Start/End: Complemental strand, 8602431 - 8602219
Alignment:
| Q |
23 |
cacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccg |
122 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||||||||||||||| || ||||| ||| | | || | ||||| || ||||||||||| | || | |
|
|
| T |
8602431 |
cacttctgtgctgaggaaatctcatcaatggtccttacaaagatgcgtgaaattgcagagaagtttctggagtcacctgtcaagaatgcagttgttactg |
8602332 |
T |
|
| Q |
123 |
tgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgc |
222 |
Q |
| |
|
|||| |||||||| ||||| ||||| ||||||||||| |||| | ||||||||||||||||| ||||| ||||||||||| | ||||| ||||| || |
|
|
| T |
8602331 |
tgccggcttattttaatgattctcagcgaaaagccacaaaagatgctggtgccattgctggtctcaatgtaatgcggataatcaatgagccaactgcagc |
8602232 |
T |
|
| Q |
223 |
agctattgcatat |
235 |
Q |
| |
|
||| |||||||| |
|
|
| T |
8602231 |
tgctcttgcatat |
8602219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 231
Target Start/End: Original strand, 8636066 - 8636262
Alignment:
| Q |
35 |
gaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatt |
134 |
Q |
| |
|
|||||||| || || |||||||| |||||||||||||||||||| ||||||||| || ||||| | || ||||||||||| || || ||||| ||||||| |
|
|
| T |
8636066 |
gaggaaatatcgtctatggtcctgacaaagatgcgagagattgctgaggcatatctggaatcatctgtcaagaatgcagtcattactgtgcccgcttatt |
8636165 |
T |
|
| Q |
135 |
tcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagctattgc |
231 |
Q |
| |
|
||||||| ||||| || ||| |||| |||| | ||||||||||| || |||||||| || |||||||| | || || |||||||||||| |||| |
|
|
| T |
8636166 |
tcaatgattctcagcgtaaatccaccaaagatgctggtgccattgccggccttaatgtaattcggataatcaatgaaccaactgctgcagcttttgc |
8636262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 6789957 - 6789788
Alignment:
| Q |
35 |
gaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatt |
134 |
Q |
| |
|
|||||| |||| || ||| |||| || |||||||| |||||||| ||| ||||||||| ||| | | || |||||||| || || ||||| ||||||| |
|
|
| T |
6789957 |
gaggaagtttcgtctatgatcctcaccaagatgcgggagattgctgagaaatatttgcagtcagagataaaaaatgcagttattactgtgcctgcttatt |
6789858 |
T |
|
| Q |
135 |
tcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataat |
204 |
Q |
| |
|
||||||| |||||||| ||||||||| ||||| | |||||||||||||||||||||||||| || ||||| |
|
|
| T |
6789857 |
tcaatgattctcaacggaaagccactttagatgctggtgccattgctggtcttaatgttatacgaataat |
6789788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 17268403 - 17268184
Alignment:
| Q |
16 |
ggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagta |
115 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| || ||||| || ||||||||||| |||||||| |||| |||| | ||||| |||||| |||||| || |
|
|
| T |
17268403 |
ggagaaacacttttgtgcagaggaaatttcgtctatggtactcacaaagatgcgggagattgctgaggaatatctagaatcatcggttatgaatgctgtc |
17268304 |
T |
|
| Q |
116 |
ataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagccta |
215 |
Q |
| |
|
|| || || || ||||| ||||| || ||||| ||||||||||| ||||| | |||| ||||||||| |||||||| || | |||| | || || | |
|
|
| T |
17268303 |
attactgtcccggcttacttcaacgattctcagcgaaaagccaccatagatgctggtgtcattgctggccttaatgtattgaaggtaatcaatgaaccaa |
17268204 |
T |
|
| Q |
216 |
ctgctgcagctattgcatat |
235 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
17268203 |
ctgctgcagctattgcatat |
17268184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 204
Target Start/End: Original strand, 7877444 - 7877625
Alignment:
| Q |
23 |
cacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccg |
122 |
Q |
| |
|
||||| ||||| |||||||| ||||| ||| |||||||||||||||| |||||||| ||| | |||| | ||||| || ||||||||||| | || | |
|
|
| T |
7877444 |
cacttttgtgccgaggaaatatcatccatgatccttacaaagatgcgcgagattgcagagaagtttttggagtcacctgtcaagaatgcagttgttactg |
7877543 |
T |
|
| Q |
123 |
tgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataat |
204 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||| |||| | ||||| |||| || || ||||||||||||||||| |
|
|
| T |
7877544 |
tgccggcttatttcaatgattctcaacgaaaagccacaaaagatgctggtgcagttgccggcctcaatgttatgcggataat |
7877625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 235
Target Start/End: Complemental strand, 8582117 - 8581945
Alignment:
| Q |
63 |
agatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgt |
162 |
Q |
| |
|
|||||||||||||||| ||||||| |||| | ||||| |||||||||||||| || || || || |||||||| ||||| || ||||||| ||||||| |
|
|
| T |
8582117 |
agatgcgagagattgcagaggcatttttggagtcacctgttaagaatgcagtgattactgtacctgcttattttaatgattcacaacgaagagccactaa |
8582018 |
T |
|
| Q |
163 |
agattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
|||| | |||| ||||| ||||| ||||| ||||||||||| | || || ||||| |||||| |||||||| |
|
|
| T |
8582017 |
agatgcaggtgaaattgcaggtctcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgcatat |
8581945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 8570731 - 8570556
Alignment:
| Q |
60 |
caaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccac |
159 |
Q |
| |
|
||||||||||||||||||| || |||| |||| | || || |||||||||||||| || || || || |||||||| ||||| || ||||||| |||||| |
|
|
| T |
8570731 |
caaagatgcgagagattgcagaagcatttttggagtctcctgttaagaatgcagtgattactgtacctgcttattttaatgattcacaacgaagagccac |
8570632 |
T |
|
| Q |
160 |
tgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
| |||| | |||| ||||||||||| ||||| ||||||||||| | || || ||||| |||||| |||||||| |
|
|
| T |
8570631 |
taaagatgcaggtgaaattgctggtctcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgcatat |
8570556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 204
Target Start/End: Complemental strand, 8576746 - 8576602
Alignment:
| Q |
60 |
caaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccac |
159 |
Q |
| |
|
||||||||||||||||||| ||||| | | |||| |||| |||||||||||||| || | ||||| |||||||| ||||| || ||||||| |||||| |
|
|
| T |
8576746 |
caaagatgcgagagattgcagaggcttttctgcagacacctgttaagaatgcagtgatttctgtgcctgcttattttaatgattcccaacgaagagccac |
8576647 |
T |
|
| Q |
160 |
tgtagattccggtgccattgctggtcttaatgttatgcggataat |
204 |
Q |
| |
|
| |||| | ||||| ||||||||||| ||||| |||| |||||| |
|
|
| T |
8576646 |
taaagatgcaggtgcaattgctggtctcaatgtcatgcagataat |
8576602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 235
Target Start/End: Complemental strand, 8654918 - 8654695
Alignment:
| Q |
12 |
gtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgc |
111 |
Q |
| |
|
|||| ||||| || || ||||| |||||||| ||||| ||| ||||||||||||||||||||||| |||||||| | |||||| || || |||| |
|
|
| T |
8654918 |
gtcaagagaagcaattttgtgctgaggaaatatcatctgcggttcttacaaagatgcgagagattgcagaggcataccttggatcacccgtcaaaaatgt |
8654819 |
T |
|
| Q |
112 |
agtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgag |
211 |
Q |
| |
|
|| | || ||||| || || |||||||||||||| |||||||| || ||||| | |||||||||||||| ||||| || || |||||| | | || |
|
|
| T |
8654818 |
cgttgttactgtgccggcatacttcaatgactctcagcgaaaagcaaccatagatgctggtgccattgctggacttaacgtcattcggatactcaatgaa |
8654719 |
T |
|
| Q |
212 |
cctactgctgcagctattgcatat |
235 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
8654718 |
cctactgccgcagctattgcatat |
8654695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 1301938 - 1301752
Alignment:
| Q |
6 |
acaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaa |
105 |
Q |
| |
|
||||| |||||||||| ||||| || | ||||||||| ||||| ||||||||||| ||||||||||| ||||| ||| ||||| | ||||| || | |
|
|
| T |
1301938 |
acaagggtcaggagaagcacttttgcgtggaggaaatatcatctatggtccttacgaagatgcgagaaattgcagagacatatctaatgtcaccagtgac |
1301839 |
T |
|
| Q |
106 |
gaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgt |
192 |
Q |
| |
|
||||| || | || ||||| || |||||||||| ||||| ||||||||||| ||||| ||||||| |||||||| |||||||| |
|
|
| T |
1301838 |
aaatgctgttgttactgtgcctgcacatttcaatgattctcagcgaaaagccaccatagatgccggtgcaattgctggccttaatgt |
1301752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 3147738 - 3147521
Alignment:
| Q |
14 |
caggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcag |
113 |
Q |
| |
|
|||||||| ||| ||||||| || ||||| ||||| ||||| || ||||||||||| ||| ||| |||| | ||| ||| || || |||||||||| |
|
|
| T |
3147738 |
caggagaagcacctatgtgctgaagaaatctcatctatggttctaacaaagatgcgcaagactgcagaggagtttttagaattgcctgtcaagaatgcag |
3147639 |
T |
|
| Q |
114 |
taataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcc |
213 |
Q |
| |
|
| | ||||| || |||||||||||||| |||| || ||||| || ||||| | |||| |||||||| |||||| ||||||||||||| | || || |
|
|
| T |
3147638 |
ttgttaccgtacctgcttatttcaatgatgctcagcggaaagcgacaatagatgctggtgttattgctggccttaatattatgcggataatcaatgaacc |
3147539 |
T |
|
| Q |
214 |
tactgctgcagctattgc |
231 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
3147538 |
tactgctgcagctattgc |
3147521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 8647328 - 8647153
Alignment:
| Q |
29 |
tgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccag |
128 |
Q |
| |
|
||||| |||||||| ||||| ||| |||| ||||||||||||||| |||| ||| |||||| || || || ||||||||||| | || ||||| | |
|
|
| T |
8647328 |
tgtgctgaggaaatatcatcgatgatcctcacaaagatgcgagaggttgcagagaaatatttaatgtcccctgtaaagaatgcagttgttactgtgcctg |
8647229 |
T |
|
| Q |
129 |
cttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataat |
204 |
Q |
| |
|
| || |||||||| | ||| |||||||||||| ||||| |||| ||||||||||| |||||| | || |||||||| |
|
|
| T |
8647228 |
catacttcaatgattatcagcgaaaagccactatagatgccggggccattgctggccttaatatcatccggataat |
8647153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 17260705 - 17260486
Alignment:
| Q |
16 |
ggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagta |
115 |
Q |
| |
|
|||||||||||| ||||| |||||||| || || ||||| ||| |||||||| |||||||| |||| |||| | ||||| |||||| |||| || |
|
|
| T |
17260705 |
ggagaaacacttttgtgcagaggaaatctcgtctatggtacttgtgaagatgcgggagattgctgaggtatatcttgaatcatcggttattaatgttgtt |
17260606 |
T |
|
| Q |
116 |
ataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagccta |
215 |
Q |
| |
|
|| || || || |||||||||||||| ||||| ||||||||||| ||||| | |||| |||||||| ||| ||||| || | |||| | || |||| |
|
|
| T |
17260605 |
attactgttcctgcttatttcaatgattctcagcgaaaagccaccatagatgctggtgttattgctggcctttatgttttgaagttaattaatgaaccta |
17260506 |
T |
|
| Q |
216 |
ctgctgcagctattgcatat |
235 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
17260505 |
ttgctgcagctattgcatat |
17260486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 235
Target Start/End: Original strand, 8382579 - 8382799
Alignment:
| Q |
15 |
aggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagt |
114 |
Q |
| |
|
|||| |||||| | ||||| |||||||| || || |||||||| | ||||||||| |||||||| ||| | |||| | ||||| | |||||| ||| |
|
|
| T |
8382579 |
aggaaaaacacctttgtgccgaggaaatctcctctatggtcctcaaaaagatgcgtgagattgcagagaattttttggagtcacctatcgagaatgtagt |
8382678 |
T |
|
| Q |
115 |
aataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcct |
214 |
Q |
| |
|
| |||||||| || ||||||||||| |||||||| |||||||| |||| | ||||| |||||||| || ||||| ||||||||||| | ||||| |
|
|
| T |
8382679 |
tgttaccgtgcctgcatatttcaatgattctcaacggaaagccacaaaagatgctggtgcgattgctggcctcaatgtaatgcggataatcaatgagcca |
8382778 |
T |
|
| Q |
215 |
actgctgcagctattgcatat |
235 |
Q |
| |
|
||||| || ||| |||||||| |
|
|
| T |
8382779 |
actgccgctgctcttgcatat |
8382799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 8591089 - 8590914
Alignment:
| Q |
29 |
tgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccag |
128 |
Q |
| |
|
|||||||||||||| ||||| ||||| || |||||||||||||||||||| || | |||| | ||||| || ||||||||||| | || ||||||| |
|
|
| T |
8591089 |
tgtgcggaggaaatctcatccatggttctcacaaagatgcgagagattgctgaaaagtttttggagtcacctgtcaagaatgcagttgttactgtgccag |
8590990 |
T |
|
| Q |
129 |
cttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataat |
204 |
Q |
| |
|
||||||| ||||| ||||| | ||||| || |||| | |||| ||||||||| | ||||| ||||||||||| |
|
|
| T |
8590989 |
cttattttaatgattctcagaggaaagctaccaaagatgctggtgtcattgctggcttgaatgtaatgcggataat |
8590914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 8538499 - 8538282
Alignment:
| Q |
17 |
gagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaa |
116 |
Q |
| |
|
||||||||||| | ||| || ||||| ||| | |||||||| ||||||||||| ||| | || || | || |||| | ||||| || || |||||||| | |
|
|
| T |
8538499 |
gagaaacacttttttgctgaagaaatatcagctatggtcctcacaaagatgcgggagttcgctgaagtatttttggagtcacctgtcaaaaatgcagtga |
8538400 |
T |
|
| Q |
117 |
taaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctac |
216 |
Q |
| |
|
| || || || |||||||||||||| || || |||| |||||| |||| | |||| ||||||||| || ||||| ||||||||||| | || ||||| |
|
|
| T |
8538399 |
ttacagtacctgcttatttcaatgattcacagcgaagagccaccaaagatgctggtgtcattgctggcctcaatgtaatgcggataatcaatgaacctac |
8538300 |
T |
|
| Q |
217 |
tgctgcagctattgcata |
234 |
Q |
| |
|
||||| ||| ||||||| |
|
|
| T |
8538299 |
agctgctgctcttgcata |
8538282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 204
Target Start/End: Complemental strand, 8546049 - 8545908
Alignment:
| Q |
63 |
agatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgt |
162 |
Q |
| |
|
|||||||||||||||| ||||||| |||| | ||||| |||||||||||||| || || || || |||||||| ||||| || |||| || | |||| |
|
|
| T |
8546049 |
agatgcgagagattgcagaggcatttttggagtcacctgttaagaatgcagtgattactgtacctgcttattttaatgattcacaacaaagatccacaaa |
8545950 |
T |
|
| Q |
163 |
agattccggtgccattgctggtcttaatgttatgcggataat |
204 |
Q |
| |
|
|||| | |||| ||||| ||||| ||||| ||||||||||| |
|
|
| T |
8545949 |
agatgcaggtgaaattgccggtctaaatgtcatgcggataat |
8545908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 204
Target Start/End: Complemental strand, 8559750 - 8559609
Alignment:
| Q |
63 |
agatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgt |
162 |
Q |
| |
|
|||||||||||||||| || |||| |||| | || ||||| ||||||| || || ||||| || |||||||| ||||| |||||| ||| |||||| |
|
|
| T |
8559750 |
agatgcgagagattgcagaagcatttttggagtcgacggttgagaatgctgtgattaccgtacctgcttattttaatgattctcaaagaagagccaccaa |
8559651 |
T |
|
| Q |
163 |
agattccggtgccattgctggtcttaatgttatgcggataat |
204 |
Q |
| |
|
|||| | |||| ||||||||||||||||| |||| |||||| |
|
|
| T |
8559650 |
agatgcaggtgaaattgctggtcttaatgtaatgcagataat |
8559609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 29577392 - 29577561
Alignment:
| Q |
35 |
gaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatt |
134 |
Q |
| |
|
|||||||| || || ||| |||| ||||||||| |||||||| ||| || |||| | | ||| || ||||||||||| || || ||||||||||||| |
|
|
| T |
29577392 |
gaggaaatatcgtctatgatcctctcaaagatgcaggagattgcagagaaatttttggagttacccgtaaagaatgcagtgatcacagtgccagcttatt |
29577491 |
T |
|
| Q |
135 |
tcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataat |
204 |
Q |
| |
|
||||||| ||||| ||||||||||| |||| |||| |||||||| || ||||| ||||||||||| |
|
|
| T |
29577492 |
tcaatgattctcagcgaaaagccaccaaagatgccggcattattgctggcctcaatgtaatgcggataat |
29577561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 159
Target Start/End: Original strand, 29581564 - 29581688
Alignment:
| Q |
35 |
gaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatt |
134 |
Q |
| |
|
|||||||| ||||| ||| |||| ||||||||| || ||||| ||| || |||| ||| || || ||||||||||| || |||||||| ||||||| |
|
|
| T |
29581564 |
gaggaaatatcatctatgatcctctcaaagatgcatgatattgcagagaaatttttggaattgcctgtaaagaatgcagtgattaccgtgcctgcttatt |
29581663 |
T |
|
| Q |
135 |
tcaatgactctcaacgaaaagccac |
159 |
Q |
| |
|
||||||| ||||| ||||||||||| |
|
|
| T |
29581664 |
tcaatgattctcagcgaaaagccac |
29581688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 201
Target Start/End: Complemental strand, 8610366 - 8610196
Alignment:
| Q |
31 |
tgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagct |
130 |
Q |
| |
|
|||||||||||||||||| ||| ||||| |||| ||| |||||| || ||| || |||| | ||| |||||| ||||||| || || ||||| ||| |
|
|
| T |
8610366 |
tgcggaggaaatttcatctatgatccttgcaaaaatgaaagagatagccgagaaatttttggagtcaaaggttaaagatgcagtgatcactgtgcctgct |
8610267 |
T |
|
| Q |
131 |
tatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggat |
201 |
Q |
| |
|
||||| ||||| ||||| || |||||||| |||| | |||| |||| |||| |||||||| || ||||| |
|
|
| T |
8610266 |
tattttaatgattctcagcggaaagccacaaaagatgctggtgtcatttctggccttaatgtaatccggat |
8610196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 82; Significance: 7e-39; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 30775718 - 30775497
Alignment:
| Q |
14 |
caggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcag |
113 |
Q |
| |
|
|||||||||| | | ||||| ||||||||||||||||| ||||| ||||| ||| |||||||||| ||| |||||| |||| || ||||| ||||||| |
|
|
| T |
30775718 |
caggagaaactcctctgtgccgaggaaatttcatcaatagtcctcacaaatatgagagagattgcagagatgtatttggaatccccagttaaaaatgcag |
30775619 |
T |
|
| Q |
114 |
taataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcc |
213 |
Q |
| |
|
| || || ||||| |||||||||||||| | || |||||||||||| | ||| | ||||||||||||||||||||||||||| | ||||| | ||||| |
|
|
| T |
30775618 |
ttatcactgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcc |
30775519 |
T |
|
| Q |
214 |
tactgctgcagctattgcatat |
235 |
Q |
| |
|
||||| ||||||||||||||| |
|
|
| T |
30775518 |
cactgcagcagctattgcatat |
30775497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 9335585 - 9335814
Alignment:
| Q |
6 |
acaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaa |
105 |
Q |
| |
|
||||| |||| ||||| ||||| ||||| |||||||| || || ||| | |||||||||||| ||||| ||||||||||||||||| || ||||| || |
|
|
| T |
9335585 |
acaagggtcaagagaagcacttttgtgctgaggaaatatcttctatgttgcttacaaagatgagagaggttgcggaggcatatttggggtcgccggtcaa |
9335684 |
T |
|
| Q |
106 |
gaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataata |
205 |
Q |
| |
|
|||||| || | |||||||||||||| |||||||| ||||| ||||| ||||| ||||| | ||| | |||||||| |||||||| || |||||||| |
|
|
| T |
9335685 |
gaatgccgttgttaccgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggccttaatgtcattcggataatc |
9335784 |
T |
|
| Q |
206 |
agcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
| || |||||||||||||||||||||||| |
|
|
| T |
9335785 |
aatgaacctactgctgcagctattgcatat |
9335814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 196
Target Start/End: Complemental strand, 35132895 - 35132732
Alignment:
| Q |
31 |
tgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagct |
130 |
Q |
| |
|
|||||| ||| | ||||| ||||| || |||||||||||||| ||||| |||||||||| ||||| | |||||||||||||| | || ||||| ||| |
|
|
| T |
35132895 |
tgcggaagaagtatcatccatggtactcacaaagatgcgagaaattgc--aggcatatttagaatcaactgttaagaatgcagttgttactgtgcctgct |
35132798 |
T |
|
| Q |
131 |
tatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatg |
196 |
Q |
| |
|
||||| | ||| |||||||||||||||||| ||||| | ||||| |||||||||| ||||||||| |
|
|
| T |
35132797 |
tattttagtgattctcaacgaaaagccactatagatgctggtgctattgctggtcccaatgttatg |
35132732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 235
Target Start/End: Original strand, 34466493 - 34466716
Alignment:
| Q |
12 |
gtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgc |
111 |
Q |
| |
|
|||||||||| ||| ||||||| |||||||| ||||| ||| ||||| |||||||||| || | ||| |||| ||||||| ||||||| |||||||||| |
|
|
| T |
34466493 |
gtcaggagaagcacctatgtgctgaggaaatctcatctatgatcctttcaaagatgcgggatactgcagaggaatatttggaatcaccaattaagaatgc |
34466592 |
T |
|
| Q |
112 |
agtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgag |
211 |
Q |
| |
|
||| || |||||||| |||||||| ||||| ||||| |||||||| ||||| ||| | ||| | |||||||| ||||||||| ||| ||||| | || |
|
|
| T |
34466593 |
agttatcaccgtgcctgcttattttaatgattctcagcgaaaagctactgtggatgctggtactattgctggccttaatgttttgcaaataatcaatgaa |
34466692 |
T |
|
| Q |
212 |
cctactgctgcagctattgcatat |
235 |
Q |
| |
|
|| ||||||||||||||||||||| |
|
|
| T |
34466693 |
cccactgctgcagctattgcatat |
34466716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 15595402 - 15595317
Alignment:
| Q |
119 |
accgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataat |
204 |
Q |
| |
|
|||||||| |||||| ||||||| |||||||||||||||||| ||||| | |||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
15595402 |
accgtgcctgcttatctcaatgattctcaacgaaaagccactatagatgcaggtgccattgctggccttaatgttatacgggtaat |
15595317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 4678380 - 4678481
Alignment:
| Q |
134 |
ttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagctattgcat |
233 |
Q |
| |
|
|||||||| |||||||||||||| || ||||| | |||||||||||||| |||||||| || | ||||| | ||| ||||||| |||||||||||||| |
|
|
| T |
4678380 |
ttcaatgattctcaacgaaaagctaccatagatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgttgcagctattgcat |
4678479 |
T |
|
| Q |
234 |
at |
235 |
Q |
| |
|
|| |
|
|
| T |
4678480 |
at |
4678481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 12235125 - 12234973
Alignment:
| Q |
44 |
tcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgact |
143 |
Q |
| |
|
||||| ||||| || |||||||||||||| || || ||||||||||| |||| || |||||||||||||| | |||||||| |||||||||||||| | |
|
|
| T |
12235125 |
tcatctatggtactcacaaagatgcgagaaatcgctgaggcatatttacaatttccagttaagaatgcagttgttaccgtgcctgcttatttcaatgatt |
12235026 |
T |
|
| Q |
144 |
ctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatg |
196 |
Q |
| |
|
||||||||||||| ||| ||||| | |||| ||||||||| || ||||||||| |
|
|
| T |
12235025 |
ctcaacgaaaagcaactatagatgctggtgtcattgctggcctcaatgttatg |
12234973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 16657234 - 16657440
Alignment:
| Q |
29 |
tgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccag |
128 |
Q |
| |
|
||||| |||||||| ||||| ||| ||||||||||||||||||| |||| ||||||| | || | || || || |||||||| || | || ||||||| |
|
|
| T |
16657234 |
tgtgctgaggaaatatcatctatgatccttacaaagatgcgagaagttgctgaggcatttatggagtcgcctgtcaagaatgctgttgttactgtgccag |
16657333 |
T |
|
| Q |
129 |
cttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagctat |
228 |
Q |
| |
|
|||| |||||||| || || ||||||||||| ||||| | |||||||| ||||| |||||||| || || || || | || ||||||||||||||||| |
|
|
| T |
16657334 |
cttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccatcgctggccttaatgtcattcgaattatcaatgaacctactgctgcagctat |
16657433 |
T |
|
| Q |
229 |
tgcatat |
235 |
Q |
| |
|
||||||| |
|
|
| T |
16657434 |
tgcatat |
16657440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 11999860 - 11999691
Alignment:
| Q |
14 |
caggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcag |
113 |
Q |
| |
|
|||||||| || ||||||| || ||| | ||||| ||||| || || ||||||||||| ||||| ||||||||||| |||||||||| ||||||| | |
|
|
| T |
11999860 |
caggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccggtaaagaatgttg |
11999761 |
T |
|
| Q |
114 |
taataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctgg |
183 |
Q |
| |
|
| | || || ||||||||||| | ||| |||||||||||||||||| ||||| ||||||| |||||||| |
|
|
| T |
11999760 |
ttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctgg |
11999691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 16661686 - 16661915
Alignment:
| Q |
6 |
acaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaa |
105 |
Q |
| |
|
||||| |||||||||| | | | ||||| |||||||| ||||| || ||||| ||||| ||| ||| |||| ||||| |||||| ||||||||||||| |
|
|
| T |
16661686 |
acaagggtcaggagaagctcctttgtgccgaggaaatctcatctattgtcctcacaaacatgaaggaggttgcagaggcttatttggaatcaccggttaa |
16661785 |
T |
|
| Q |
106 |
gaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataata |
205 |
Q |
| |
|
|||||||| | || || || |||||||| || || ||||| ||||||||||| | ||| | |||||||||||||| ||||| ||| || ||||||| |
|
|
| T |
16661786 |
aaatgcagttgtcactgttcctgcttattttaacgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaacgttgtgaggataatc |
16661885 |
T |
|
| Q |
206 |
agcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
| || || ||||| ||||||||||||||| |
|
|
| T |
16661886 |
aatgaacccactgcagcagctattgcatat |
16661915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 12245108 - 12245329
Alignment:
| Q |
14 |
caggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcag |
113 |
Q |
| |
|
|||||||| || ||||||| || ||| | ||||| ||||| || |||||||||||||| ||||| ||||||||||| |||||||||| |||||||| | |
|
|
| T |
12245108 |
caggagaagcagctatgtgctgaagaagtatcatctatggtactaacaaagatgcgagaaattgctgaggcatatttagaatcaccggtaaagaatgctg |
12245207 |
T |
|
| Q |
114 |
taataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcc |
213 |
Q |
| |
|
| | || || || |||||||| | ||| ||||| |||||||| || ||||| | || | ||||||||||| ||||||||| || |||| | || || |
|
|
| T |
12245208 |
ttgttactgtacctgcttattttagtgattctcagcgaaaagcaacgatagatgctggctcaattgctggtctcaatgttatgagggtaatgaatgaacc |
12245307 |
T |
|
| Q |
214 |
tactgctgcagctattgcatat |
235 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
12245308 |
cactgctgcagctgttgcatat |
12245329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 235
Target Start/End: Complemental strand, 7542662 - 7542471
Alignment:
| Q |
44 |
tcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgact |
143 |
Q |
| |
|
||||| ||||| || |||||||||||||| ||||| ||| | ||||| || || | || | ||||||||| | || || || |||||||| ||||| | |
|
|
| T |
7542662 |
tcatctatggtactcacaaagatgcgagaaattgctgagtcgtatttagaaacaactgtgacgaatgcagttgttactgtacctgcttattttaatgatt |
7542563 |
T |
|
| Q |
144 |
ctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
||||||||||||||||| ||||| | |||||||||||||| || ||||||||| || ||| | || |||||||| |||||| |||||||| |
|
|
| T |
7542562 |
ctcaacgaaaagccactatagatgcgggtgccattgctggcctcaatgttatgagggcaatgaatgaacctactgccgcagctgttgcatat |
7542471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 235
Target Start/End: Complemental strand, 14703826 - 14703653
Alignment:
| Q |
62 |
aagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactg |
161 |
Q |
| |
|
||||||||||| ||||| ||| ||||||| | ||| | |||||||||||||| | || ||||| |||||||| | ||| |||||| ||||||||||| |
|
|
| T |
14703826 |
aagatgcgagaaattgctgagacatatttagagtcaactgttaagaatgcagttgttacggtgcctgcttattttagtgattctcaaagaaaagccacta |
14703727 |
T |
|
| Q |
162 |
tagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
| ||| | |||| ||||| || || ||||||||| || |||| | || ||||| |||||||||||||||||| |
|
|
| T |
14703726 |
tggatgctggtgttattgccggcctcaatgttatgagggtaatgaatgaacctacagctgcagctattgcatat |
14703653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 12258328 - 12258504
Alignment:
| Q |
59 |
acaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagcca |
158 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| ||||||| |||||||||||||| | || ||||| || ||||| | ||| || ||| | ||||||| |
|
|
| T |
12258328 |
acaaagatgcgagaaattgctgaggcatatttagaatcacccgttaagaatgcagttgttactgtgcctgcatattttagtgattcacaaaggaaagcca |
12258427 |
T |
|
| Q |
159 |
ctgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
|| ||||| ||| |||| ||| || ||||||||| |||| ||| || ||||||||||||||| |||||||| |
|
|
| T |
12258428 |
ctatagatgtgggtaatattgttggcctgaatgttatgaagatattaaatgaacctactgctgcagcttttgcatat |
12258504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 43745313 - 43745094
Alignment:
| Q |
14 |
caggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcag |
113 |
Q |
| |
|
|||||||| ||| ||||||| || ||||| ||||| ||| | || ||||||||||| |||||||| ||| ||| |||||||| || || |||||||||| |
|
|
| T |
43745313 |
caggagaagcacctatgtgccgaagaaatctcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaattgcctgtcaagaatgcag |
43745214 |
T |
|
| Q |
114 |
taataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcc |
213 |
Q |
| |
|
| | || ||||| |||||||||||||| | ||| || |||||||| ||||| | |||||||||||||| ||| |||||||| |||||| | || || |
|
|
| T |
43745213 |
ttgttactgtgccggcttatttcaatgattatcagcggaaagccac--tagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacc |
43745116 |
T |
|
| Q |
214 |
tactgctgcagctattgcatat |
235 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
43745115 |
cactgctgcagctattgcatat |
43745094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 235
Target Start/End: Complemental strand, 12528921 - 12528749
Alignment:
| Q |
63 |
agatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgt |
162 |
Q |
| |
|
|||||||||||||||| || |||| | | | ||||| |||||||||||||| || || |||||||| ||||||||||| || || ||| |||||| |
|
|
| T |
12528921 |
agatgcgagagattgcagatgcatttcttgagtcacctgttaagaatgcagtgattacggtgccagcgtatttcaatgattcgcagcgacgagccaccaa |
12528822 |
T |
|
| Q |
163 |
agattccggtgccattgctggtcttaatgttatgcggataataagcgagcctactgctgcagctattgcatat |
235 |
Q |
| |
|
||| | |||| ||||||||| || ||||| || |||||||| | ||| || ||||| || ||| |||||||| |
|
|
| T |
12528821 |
ggatgctggtgtcattgctggcctcaatgtaatacggataatcaacgaaccaactgcagctgctcttgcatat |
12528749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 28220417 - 28220196
Alignment:
| Q |
14 |
caggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagattgcggaggcatatttgcaatcaccggttaagaatgcag |
113 |
Q |
| |
|
|||||||| ||| ||||||| || ||||| ||||| ||||| || ||||||||||| |||||||| ||||| | |||| ||| || || |||||||||| |
|
|
| T |
28220417 |
caggagaagcacctatgtgccgaagaaatctcatctatggttctaacaaagatgcgtgagattgcagaggcctttttggaatttcctgtcaagaatgcag |
28220318 |
T |
|
| Q |
114 |
taataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggtcttaatgttatgcggataataagcgagcc |
213 |
Q |
| |
|
| || || ||||| |||||||||||||| | ||| || |||||||| ||||| | ||| ||||||||||||| |||||| | ||||| | | || || |
|
|
| T |
28220317 |
ttattactgtgcctgcttatttcaatgattatcagcggaaagccaccatagatgcaggtaccattgctggtctaaatgttctaaggatagtcaatgaacc |
28220218 |
T |
|
| Q |
214 |
tactgctgcagctattgcatat |
235 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
28220217 |
cactgctgctgctattgcatat |
28220196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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