View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19520_low_9 (Length: 678)

Name: NF19520_low_9
Description: NF19520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19520_low_9
NF19520_low_9
[»] chr2 (2 HSPs)
chr2 (1-662)||(45402054-45402715)
chr2 (219-316)||(18812132-18812229)
[»] chr3 (4 HSPs)
chr3 (108-662)||(23361641-23362196)
chr3 (541-615)||(28696533-28696607)
chr3 (269-303)||(47351668-47351702)
chr3 (500-540)||(47351506-47351546)
[»] chr5 (1 HSPs)
chr5 (156-662)||(19611202-19611709)
[»] chr6 (1 HSPs)
chr6 (159-655)||(7599963-7600460)
[»] chr4 (4 HSPs)
chr4 (159-655)||(28462062-28462559)
chr4 (541-615)||(54188531-54188605)
chr4 (541-615)||(8570573-8570647)
chr4 (560-601)||(2550273-2550314)
[»] chr8 (2 HSPs)
chr8 (331-550)||(8835612-8835833)
chr8 (558-605)||(23241019-23241066)
[»] chr7 (3 HSPs)
chr7 (560-618)||(7710913-7710971)
chr7 (541-615)||(3367619-3367693)
chr7 (560-609)||(22884134-22884183)


Alignment Details
Target: chr2 (Bit Score: 580; Significance: 0; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 580; E-Value: 0
Query Start/End: Original strand, 1 - 662
Target Start/End: Complemental strand, 45402715 - 45402054
Alignment:
Q  1 ctgcaaggttataaaatatccggttaggctctatccatgatttttgttgcagggatagagaccaggtaatgtttgtgagtagcattatgataaaaaatag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45402715 ctgcaaggttataaaatatccggttaggctctatccatgatttttgttgcaaggatagagaccaggtaatgtttgtgagtagcattatgataaaaaatag 45402616  T
Q  101 tagggtgtattatgattagactacgtgcatataataatctaataaagtggactacaacactttttaactccctgccaccaatattttaccctataatctg 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45402615 tagggtgtattacgattagactacgtgcatataataatctaataatgtggactacaacactttttaactccctgccaccaatattttaccctataatatg 45402516  T
Q  201 agaaaattctagttcacctatttttcctcctctgccaagaaacaactttccaacttgtgaattaaaagctctactaagtaccaatatacaatcagttata 300  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45402515 agaaatttctagttcacctattttacctcctctgccaagaaacaactttccaacttgtgaattaaaagctctactaagtaccaatatacaatcagttata 45402416  T
Q  301 taagcatacacaacgagcatgtctaaagtgataacaatgacattagaatagaacaaaagagaatttgaaaagnnnnnnnnnncacttttggattaacaaa 400  Q
    |||||||||| || |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||          ||||||||||||||||||    
T  45402415 taagcatacataatgagcatgtctaaagtgataacattgacattagaatagaacaaaagggaatttgaaaagaaaaaaaaaacacttttggattaacaaa 45402316  T
Q  401 gtccaacataaaattgcagcctaagagaatttagagaatttaaaactaaagcatagagaagaaattaaaggcagtgcagaaagagacctctgaaatcgta 500  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45402315 gtccaacataaaattgcagcctaaaagaatttagagaatttaaaattgaagcatagagaagaaattaaaggcagtgcagaaagagacctctgaaatcgta 45402216  T
Q  501 tccaacaccgaaacctcaaccaacaccaaaacctgcaaaaacaattgcaaaacaggttcaaatttcattgagacaatttatcaaacacctcctatgcaac 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45402215 tccaacaccgaaacctcaaccaacaccaaaacctgcaaaaacaattgcaaaacaggttcaaatttcattgagacaatttatcaaacacctcctatgcaac 45402116  T
Q  601 acaataataccttgcaagagaaaatttcactgtcaaatttcacaataatacaacgagggaaa 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45402115 acaataataccttgcaagagaaaatttcactgtcaaatttcacaataatacaacgagggaaa 45402054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 18812229 - 18812132
Alignment:
Q  219 tatttttcctcctctgccaagaaacaactttccaacttgtgaattaaaagctctactaagtaccaatatacaatcagttatataagcatacacaacga 316  Q
    |||||||| ||| || |||||||| |||| | || | || ||||||||| ||||||||| |||||||||||||| ||||||||||||||||| |||||    
T  18812229 tatttttcatccactaccaagaaaaaactattcatcatgggaattaaaacctctactaaataccaatatacaataagttatataagcatacataacga 18812132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 470; Significance: 0; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 108 - 662
Target Start/End: Complemental strand, 23362196 - 23361641
Alignment:
Q  108 tattatgattagactacgtgcatataataatctaataaagtggactacaacactttttaactccctgccaccaatattttaccctataatctgagaaaat 207  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23362196 tattacgattagactacgtgcatataataatctaataatgtggactacaacactttttaactccctgccaccaatattttaccctataatctgagaaaat 23362097  T
Q  208 tctagttcacctatttttcctcctctgccaagaaacaactttccaacttgtgaattaaaagctctactaagtaccaatatacaatcagttatataagcat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23362096 tctagttcacctatttttcctcctctgccaagaaacaactttccaacttgtgaattaaaagctctactaagtaccaatatacaatcagttatataagcat 23361997  T
Q  308 acacaacgagcatgtctaaagtgataacaatgacattagaatagaacaaaagagaatttgaaaagnnnnnnnnnn-cacttttggattaacaaagtccaa 406  Q
    ||| ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||           ||||||||||||||||||||||||    
T  23361996 acataacgagcatgtctaaagtgataacatttacattagaatagaacaaaagggaatttgaaaaggaaaaaaaaaacacttttggattaacaaagtccaa 23361897  T
Q  407 cataaaattgcagcctaagagaatttagagaatttaaaactaaagcatagagaagaaattaaaggcagtgcagaaagagacctctgaaatcgtatccaac 506  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23361896 cataaaattgcagcctaaaagaatttagagaatttaaaattgaagcatagagaagaaattaaaggcattgcagaaagagacctctgaaatcgtatccaac 23361797  T
Q  507 accgaaacctcaaccaacaccaaaacctgcaaaaacaattgcaaaacaggttcaaatttcattgagacaatttatcaaacacctcctatgcaacacaata 606  Q
    || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23361796 actgaaacctcaaccaacaccaaaacctgcaaaaataattgcaaaacaggttcaaatttcattgagacaatttatcaaacacctcctatgcaacacaata 23361697  T
Q  607 ataccttgcaagagaaaatttcactgtcaaatttcacaataatacaacgagggaaa 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23361696 ataccttgcaagagaaaatttcactgtcaaatttcacaataatacaacgagggaaa 23361641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 615
Target Start/End: Complemental strand, 28696607 - 28696533
Alignment:
Q  541 acaattgcaaaacaggttcaaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttgc 615  Q
    ||||||||||||||   ||||||||||||| | ||| ||||| |||||||  || ||| ||||||||||||||||    
T  28696607 acaattgcaaaacatagtcaaatttcattgcgtcaaattatcgaacacctgataggcagcacaataataccttgc 28696533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 269 - 303
Target Start/End: Complemental strand, 47351702 - 47351668
Alignment:
Q  269 ctctactaagtaccaatatacaatcagttatataa 303  Q
    ||||||||| |||||||||||||||||||||||||    
T  47351702 ctctactaaataccaatatacaatcagttatataa 47351668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 500 - 540
Target Start/End: Complemental strand, 47351546 - 47351506
Alignment:
Q  500 atccaacaccgaaacctcaaccaacaccaaaacctgcaaaa 540  Q
    |||||||||| ||||| ||||||||||| ||||||||||||    
T  47351546 atccaacaccaaaaccgcaaccaacaccgaaacctgcaaaa 47351506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 438; Significance: 0; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 156 - 662
Target Start/End: Complemental strand, 19611709 - 19611202
Alignment:
Q  156 aacactttttaactccctgccaccaatattttaccctataatctgagaaaattctagttcacctatttttcctcctctgccaagaaacaactttccaact 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19611709 aacactttttaactccctgccaccaatattttaccctataatctgagaaaattctagttcacctatttttcctcctctgccaagaaacaactttccaact 19611610  T
Q  256 tgtgaattaaaagctctactaagtaccaatatacaatcagttatataagcatacacaacgagcatgtctaaagtgataacaatgacattagaatagaaca 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||    
T  19611609 tgtgaattaaaagctctactaagtaccaatatacaatcagttatataagcatacataatgagcatgtctaaagtgataacattgacattagaatagaaca 19611510  T
Q  356 aaagagaatttgaaaagnnnnnnnnnn-cacttttggattaacaaagtccaacataaaattgcagcctaagagaatttagagaatttaaaactaaagcat 454  Q
    |||| ||||||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||    
T  19611509 aaagggaatttgaaaagaaaaaaaaaaacacttttggattaacaaagtccaacataaaattgcagcctaaaagaatttagagaatttaaaattgaagcat 19611410  T
Q  455 agagaagaaattaaaggcagtgcagaaagagacctctgaaatcgtatccaacaccgaaacctcaaccaacaccaaaacctgcaaaaacaattgcaaaaca 554  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19611409 agagaagaaattaaaggcagtgcagaaagagacctctgaaatcgtatccaacaccgaaacctcaaccaacaccaaaacctgcaaaaaaaattgcaaaaca 19611310  T
Q  555 ggttcaaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttgcaagagaaaatttcactgtcaaatttcacaataatacaac 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19611309 ggttcaaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttgcaagagaaaatttcactgtcaaatttcacaataatacaac 19611210  T
Q  655 gagggaaa 662  Q
    ||||||||    
T  19611209 gagggaaa 19611202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 416; Significance: 0; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 159 - 655
Target Start/End: Complemental strand, 7600460 - 7599963
Alignment:
Q  159 actttttaactccctgccaccaatattttaccctataatctgagaaaattctagttcacctatttttcctcctctgccaagaaacaactttccaacttgt 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7600460 actttttaactccctgccaccaatattttaccctataatctgagaaaattctagttcacctatttttcctcctctgccaagaaacaactttccaacttgt 7600361  T
Q  259 gaattaaaagctctactaagtaccaatatacaatcagttatataagcatacacaacgagcatgtctaaagtgataacaatgacattagaatagaacaaaa 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  7600360 gaattaaaagctctactaagtaccaatatacaatcagttatataagcatacataatgagcatgtctaaagtgataacattgacattagaatagaacaaaa 7600261  T
Q  359 gagaatttgaaaagnnnnnnnnnn-cacttttggattaacaaagtccaacataaaattgcagcctaagagaatttagagaatttaaaactaaagcataga 457  Q
    | ||||||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||    
T  7600260 gggaatttgaaaagaaaaaaaaaaacacttttggattaacaaagtccaacataaaattgcagcctaaaagaatttagagaatttaaaattgaagcataga 7600161  T
Q  458 gaagaaattaaaggcagtgcagaaagagacctctgaaatcgtatccaacaccgaaacctcaaccaacaccaaaacctgcaaaaacaattgcaaaacaggt 557  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7600160 gaagaaattaaaggcagtgcagaaagagacctctgaaatcgtatccaacacagaaacctcaaccaacaccaaaacctgcaaaaacaattgcaaaacaggt 7600061  T
Q  558 tcaaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttgcaagagaaaatttcactgtcaaatttcacaataatacaacg 655  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  7600060 tcaaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttggaagaaaaaacttcactgtcaaatttcacaataatacaacg 7599963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 410; Significance: 0; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 159 - 655
Target Start/End: Original strand, 28462062 - 28462559
Alignment:
Q  159 actttttaactccctgccaccaatattttaccctataatctgagaaaattctagttcacctatttttcctcctctgccaagaaacaactttccaacttgt 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28462062 actttttaactccctgccaccaatattttaccctataatctgagaaaattctagttcacctatttttcctcctctgccaagaaacaactttccaacttgt 28462161  T
Q  259 gaattaaaagctctactaagtaccaatatacaatcagttatataagcatacacaacgagcatgtctaaagtgataacaatgacattagaatagaacaaaa 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  28462162 gaattaaaagctctactaagtaccaatatacaatcagttatataagcatacataatgagcatgtctaaagtgataacattgacattagaatagaacaaaa 28462261  T
Q  359 gagaatttgaaaagnnnnnnnnnn--cacttttggattaacaaagtccaacataaaattgcagcctaagagaatttagagaatttaaaactaaagcatag 456  Q
    | ||||||||||||            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||    
T  28462262 gggaatttgaaaagaaaaaaaaaaaacacttttggattaacaaagtccaacataaaattgcagcctaaaagaatttagagaatttaaaattgaagcatag 28462361  T
Q  457 agaagaaattaaaggcagtgcagaaagagacctctgaaatcgtatccaacaccgaaacctcaaccaacaccaaaacctgcaaaaacaattgcaaaacagg 556  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28462362 agaagaaattaaaggcagtgcagaaagagacctctgaaatcgtatccaacacagaaacctcaaccaacaccaaaacctgcaaaaacaattgcaaaacagg 28462461  T
Q  557 ttcaaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttgcaagagaaaatttcactgtcaaatttcacaataatacaacg 655  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  28462462 ttcaaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttggaaga-aaaacttcactgtcaaatttcacaataatacaacg 28462559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 615
Target Start/End: Original strand, 54188531 - 54188605
Alignment:
Q  541 acaattgcaaaacaggttcaaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttgc 615  Q
    ||||||||||||||   ||||||||||||||| ||| ||||| |||||||  || ||| ||||||||||||||||    
T  54188531 acaattgcaaaacacagtcaaatttcattgagtcaaattatcgaacacctgataggcagcacaataataccttgc 54188605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 615
Target Start/End: Complemental strand, 8570647 - 8570573
Alignment:
Q  541 acaattgcaaaacaggttcaaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttgc 615  Q
    ||||||||||||||   ||||||||||||| | ||| ||||| |||||||  || ||| ||||||||||||||||    
T  8570647 acaattgcaaaacatagtcaaatttcattgcgtcaaattatcgaacacctgataggcagcacaataataccttgc 8570573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 601
Target Start/End: Original strand, 2550273 - 2550314
Alignment:
Q  560 aaatttcattgagacaatttatcaaacacctcctatgcaaca 601  Q
    ||||||||||||| ||| |||||||||||||| |||||||||    
T  2550273 aaatttcattgagtcaaattatcaaacacctcatatgcaaca 2550314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 331 - 550
Target Start/End: Original strand, 8835612 - 8835833
Alignment:
Q  331 ataacaatgacattagaatagaacaaaagagaatttgaaaagnnnnnnnnnncacttttggattaacaaagtccaacataaaattgcagcctaagagaat 430  Q
    |||||| ||||||||||||||||||||||  |||||||||            |||||||||||||||||||||||  ||||||||||||||||| | |||    
T  8835612 ataacattgacattagaatagaacaaaaggaaatttgaaagaaagagaaaaacacttttggattaacaaagtccattataaaattgcagcctaaaataat 8835711  T
Q  431 ttagagaatttaaaactaaagcatagagaagaaattaaagg--cagtgcagaaagagacctctgaaatcgtatccaacaccgaaacctcaaccaacacca 528  Q
    || |||||||||||| | |||||||||||||||||||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||||||||| |    
T  8835712 tttgagaatttaaaattgaagcatagagaagaaattaaaggtagagtgcagaaagagacctttgaaatcccatccaacaccgaaacctcaaccaacacaa 8835811  T
Q  529 aaacctgcaaaaacaattgcaa 550  Q
    ||| ||||||||||||||||||    
T  8835812 aaaactgcaaaaacaattgcaa 8835833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 605
Target Start/End: Complemental strand, 23241066 - 23241019
Alignment:
Q  558 tcaaatttcattgagacaatttatcaaacacctcctatgcaacacaat 605  Q
    ||||||||||||||| ||| ||||||||||| || |||||||||||||    
T  23241066 tcaaatttcattgagtcaaattatcaaacacttcatatgcaacacaat 23241019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 560 - 618
Target Start/End: Complemental strand, 7710971 - 7710913
Alignment:
Q  560 aaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttgcaag 618  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||    
T  7710971 aaatttcattgagtcaaattatcaaacacctcatatgcaacacaatcataccttgcaag 7710913  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 615
Target Start/End: Original strand, 3367619 - 3367693
Alignment:
Q  541 acaattgcaaaacaggttcaaatttcattgagacaatttatcaaacacctcctatgcaacacaataataccttgc 615  Q
    ||||||||||||||   ||||||||||||||| ||| |||||||||||||  || ||| ||||||||||||||||    
T  3367619 acaattgcaaaacacagtcaaatttcattgagtcaaattatcaaacacctgataggcagcacaataataccttgc 3367693  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 22884183 - 22884134
Alignment:
Q  560 aaatttcattgagacaatttatcaaacacctcctatgcaacacaataata 609  Q
    ||||||||||||| ||| ||||||||||||||  | ||||||||||||||    
T  22884183 aaatttcattgagtcaaattatcaaacacctcacacgcaacacaataata 22884134  T

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