View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19522_high_14 (Length: 384)
Name: NF19522_high_14
Description: NF19522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19522_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 88 - 368
Target Start/End: Complemental strand, 37697155 - 37696875
Alignment:
| Q |
88 |
gtaccgttgtacatgggaggaggagagatggagtagcaaaggaaatcctggttttgatcgtaattagagcaatcaaggctagtattatatccacttttac |
187 |
Q |
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| T |
37697155 |
gtaccgttgtacatgggaggaggagagatggagtcccaaaggaaatcctggttttgatcgtaattagagcaatcaaggctagtattatatccacttttac |
37697056 |
T |
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| Q |
188 |
aaacacaaacaaatccacttcctggaggagcatatccacacacaccaccactactctcacaactagtacactcagtggtcacaatgtcatcaaaaacacc |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
37697055 |
aaacacaaacaaatccacttcctggaggagcatatccacacacaccaccactactctcacaactagtacacttagtggtcacaatgtcatcaaaaacacc |
37696956 |
T |
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| Q |
288 |
atgtgtatatttcaatgccactccataaacccaatgagtaggatcagtagggttatcaccaagtgacacgaccgaagtata |
368 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37696955 |
atgtgtatatttcaatgccactccataaacccaatgagtaggatcagtagggttatcaccaagtgacacgaccgaagtata |
37696875 |
T |
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