View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19522_high_22 (Length: 319)
Name: NF19522_high_22
Description: NF19522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19522_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 19 - 309
Target Start/End: Complemental strand, 53597473 - 53597183
Alignment:
| Q |
19 |
acattatactcagattgtgtggaaaagtactagaagaattggttgtgcaagagttgtgtgtgatgatggagatgtgttcatgacttgtaactatgatcct |
118 |
Q |
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| T |
53597473 |
acattatactcagattgtgtggaaaagtactagaagaattggttgtgcaagagttgtgtgtgatgatggagatgtgttcatgacttgtaactatgatcct |
53597374 |
T |
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| Q |
119 |
gttggtaattatgttggagaacgaccatattaatttaattaatcatataagtatgtatattggttatatatggtagtgtgaattcagttctttagtcctt |
218 |
Q |
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| T |
53597373 |
gttggtaattatgttggagaacgaccatattaatttaattaatcatataagtatgtatattggttatatatggtagtgtgaattcagttatttagtcctt |
53597274 |
T |
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| Q |
219 |
ttaaactagcaatatgagtatattgtatgttggtataaattgagcaaatgtgtatggttgagatttgtgaatagttattaaattgcctttg |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| |||| |
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| T |
53597273 |
ttaaactagcaatatgagtatattgtatgttggtataaattgagcgaatgtgtatggttgtgacttgtgaatagttattaaattgcatttg |
53597183 |
T |
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