View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19522_high_28 (Length: 250)
Name: NF19522_high_28
Description: NF19522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19522_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 9 - 249
Target Start/End: Complemental strand, 25683001 - 25682759
Alignment:
| Q |
9 |
gaagaaaatatagacacagagagaggaaaattaatgagaaaaattatatgaatgtaagtttcaatacttgcatatattcatatcatgtagacactgnnnn |
108 |
Q |
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| T |
25683001 |
gaagaatatatagacacagagagaggaaaattaatgagcaaaattaaatgaatgtaagtttcaatacttgcatatattcatatcatgtagacactgaaaa |
25682902 |
T |
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| Q |
109 |
nnntgaatgaatagtataatatattnnnnnnnntgacaatataaagttacatatatagtctatagacttcaaaagaataagaaataatggtgatatgtat |
208 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25682901 |
aaatgaatgaatagtataatatattaaaaaaaatgacaatataaagttacatatatagtctatagacttcaaaagaataagaaataatggtgatatgtat |
25682802 |
T |
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| Q |
209 |
tgtattgaaagtgaatttgagtt--ttttgtctctttcaatat |
249 |
Q |
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||||||||||||||||||||||| |||||||||||||||||| |
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| T |
25682801 |
tgtattgaaagtgaatttgagttttttttgtctctttcaatat |
25682759 |
T |
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