View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19522_high_32 (Length: 245)
Name: NF19522_high_32
Description: NF19522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19522_high_32 |
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Alignment Details
Target: chr2 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 3035951 - 3035753
Alignment:
| Q |
16 |
ctagttaagttaatcatgcatagtttaggtacatatatatttacaacagaaacaaaattgtgtnnnnnnnttaacagtatagtgtgctggatagtatatt |
115 |
Q |
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| T |
3035951 |
ctagttaagttaatcatgcatagtttaggtacatatatatttacaacagaaacaaaattgtgtaaaaaaattaacagtatagtgtgctggatagtatatt |
3035852 |
T |
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| Q |
116 |
tacatcatattaggcannnnnnnnnnnnnnnnngttgtgcttgtaagttaaggttggattattgtcttttaccaaaaataaggtaggactgttgtcata |
214 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
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| T |
3035851 |
tacatcatattaggcattttttattatttttttgttgtgcttgtaagttaaggttggattattgtcttttaccaaaaataagatgggactgttgtcata |
3035753 |
T |
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