View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19522_high_6 (Length: 497)

Name: NF19522_high_6
Description: NF19522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19522_high_6
NF19522_high_6
[»] chr8 (13 HSPs)
chr8 (12-477)||(391428-391893)
chr8 (395-458)||(8751291-8751354)
chr8 (360-458)||(27782936-27783036)
chr8 (157-242)||(1192706-1192791)
chr8 (405-458)||(24860551-24860604)
chr8 (405-453)||(42602627-42602675)
chr8 (187-242)||(27652984-27653039)
chr8 (189-239)||(17773000-17773050)
chr8 (405-458)||(3396046-3396099)
chr8 (405-458)||(41857964-41858017)
chr8 (414-458)||(485880-485924)
chr8 (414-458)||(18441283-18441327)
chr8 (187-235)||(28991475-28991523)
[»] chr5 (20 HSPs)
chr5 (389-473)||(7576746-7576830)
chr5 (389-453)||(37396248-37396312)
chr5 (405-458)||(35928639-35928692)
chr5 (407-458)||(20192505-20192556)
chr5 (397-458)||(34594846-34594908)
chr5 (405-458)||(1401294-1401347)
chr5 (405-458)||(3600505-3600558)
chr5 (405-458)||(8537354-8537407)
chr5 (405-458)||(11346196-11346249)
chr5 (405-458)||(35564434-35564487)
chr5 (158-234)||(7085123-7085199)
chr5 (405-458)||(7876-7929)
chr5 (405-458)||(11027280-11027333)
chr5 (405-458)||(18307420-18307473)
chr5 (405-458)||(27662034-27662087)
chr5 (405-458)||(28880512-28880565)
chr5 (405-458)||(30709095-30709148)
chr5 (405-458)||(38853657-38853710)
chr5 (405-458)||(42865645-42865698)
chr5 (414-458)||(19037300-19037344)
[»] chr2 (18 HSPs)
chr2 (396-458)||(20988042-20988104)
chr2 (402-458)||(40679452-40679508)
chr2 (389-473)||(13567231-13567311)
chr2 (405-458)||(29093673-29093726)
chr2 (405-458)||(35490803-35490856)
chr2 (407-458)||(43491290-43491341)
chr2 (362-436)||(13562295-13562369)
chr2 (405-458)||(10365633-10365686)
chr2 (405-458)||(16580666-16580719)
chr2 (405-458)||(26858351-26858404)
chr2 (401-450)||(28747572-28747621)
chr2 (405-458)||(39393217-39393270)
chr2 (405-458)||(39800487-39800540)
chr2 (405-458)||(41500065-41500118)
chr2 (414-458)||(2648298-2648342)
chr2 (414-458)||(3937682-3937726)
chr2 (405-453)||(24512355-24512403)
chr2 (414-458)||(43982398-43982442)
[»] chr6 (15 HSPs)
chr6 (405-458)||(26856072-26856125)
chr6 (405-458)||(30765786-30765839)
chr6 (397-434)||(17523906-17523943)
chr6 (405-458)||(29065906-29065959)
chr6 (405-458)||(29074919-29074972)
chr6 (405-458)||(29079683-29079736)
chr6 (405-458)||(29107492-29107545)
chr6 (405-458)||(20242919-20242972)
chr6 (405-458)||(22136903-22136956)
chr6 (405-458)||(29061448-29061501)
chr6 (405-458)||(32034235-32034288)
chr6 (414-458)||(6205026-6205070)
chr6 (414-458)||(11691993-11692037)
chr6 (405-453)||(22305304-22305352)
chr6 (414-458)||(27639724-27639768)
[»] chr4 (23 HSPs)
chr4 (405-453)||(958453-958501)
chr4 (405-455)||(8876773-8876823)
chr4 (405-458)||(24074654-24074707)
chr4 (405-458)||(25143586-25143639)
chr4 (405-458)||(44561171-44561224)
chr4 (407-458)||(34154269-34154320)
chr4 (187-230)||(41534972-41535015)
chr4 (405-452)||(56138430-56138477)
chr4 (412-458)||(11866776-11866822)
chr4 (405-458)||(243186-243239)
chr4 (405-458)||(4786182-4786235)
chr4 (405-458)||(6283316-6283369)
chr4 (405-458)||(11287661-11287714)
chr4 (405-458)||(13181948-13182001)
chr4 (405-458)||(21017833-21017886)
chr4 (405-458)||(28081647-28081700)
chr4 (405-458)||(29700153-29700206)
chr4 (405-458)||(40354430-40354483)
chr4 (405-458)||(51429180-51429233)
chr4 (406-458)||(1042114-1042166)
chr4 (414-458)||(6177940-6177984)
chr4 (414-458)||(41795186-41795230)
chr4 (414-458)||(49094283-49094327)
[»] chr1 (17 HSPs)
chr1 (160-235)||(3287793-3287866)
chr1 (405-458)||(13972239-13972292)
chr1 (405-458)||(24364558-24364611)
chr1 (405-458)||(26637094-26637147)
chr1 (405-458)||(27487518-27487571)
chr1 (405-458)||(49927355-49927408)
chr1 (189-239)||(19445015-19445065)
chr1 (405-458)||(6434935-6434988)
chr1 (405-458)||(14174754-14174807)
chr1 (405-458)||(19159815-19159868)
chr1 (405-458)||(19263289-19263342)
chr1 (405-458)||(29709157-29709210)
chr1 (405-458)||(35526865-35526918)
chr1 (405-458)||(49395767-49395820)
chr1 (405-458)||(49426876-49426929)
chr1 (405-453)||(13635951-13635999)
chr1 (405-453)||(29435138-29435186)
[»] chr7 (16 HSPs)
chr7 (395-469)||(1804839-1804913)
chr7 (405-458)||(17838839-17838892)
chr7 (405-458)||(42682182-42682235)
chr7 (405-458)||(45364071-45364124)
chr7 (405-458)||(48316164-48316217)
chr7 (406-458)||(3381428-3381480)
chr7 (405-453)||(28115379-28115427)
chr7 (405-453)||(40587840-40587888)
chr7 (407-458)||(34140060-34140111)
chr7 (405-452)||(41047956-41048003)
chr7 (401-454)||(7066244-7066297)
chr7 (405-458)||(21649912-21649965)
chr7 (405-458)||(28980013-28980066)
chr7 (405-458)||(30355082-30355135)
chr7 (405-458)||(48269820-48269873)
chr7 (414-458)||(9367554-9367598)
[»] chr3 (24 HSPs)
chr3 (401-451)||(4095326-4095376)
chr3 (396-458)||(17267937-17267999)
chr3 (405-458)||(4004644-4004697)
chr3 (405-458)||(19454194-19454247)
chr3 (405-458)||(24703260-24703313)
chr3 (405-458)||(34694264-34694317)
chr3 (405-458)||(41803167-41803220)
chr3 (405-458)||(49609551-49609604)
chr3 (406-458)||(2426651-2426703)
chr3 (406-458)||(52570400-52570452)
chr3 (407-458)||(20366374-20366425)
chr3 (405-458)||(2271144-2271197)
chr3 (405-458)||(2647530-2647583)
chr3 (405-458)||(13896707-13896760)
chr3 (405-458)||(36134512-36134565)
chr3 (405-458)||(49219633-49219686)
chr3 (405-458)||(50343403-50343456)
chr3 (405-458)||(51402252-51402305)
chr3 (405-458)||(51696426-51696479)
chr3 (405-458)||(55207494-55207547)
chr3 (356-433)||(33798379-33798458)
chr3 (414-458)||(34049279-34049323)
chr3 (414-458)||(46402555-46402599)
chr3 (414-458)||(54389994-54390038)
[»] scaffold0199 (1 HSPs)
scaffold0199 (405-458)||(12219-12272)
[»] scaffold0176 (1 HSPs)
scaffold0176 (407-458)||(985-1036)
[»] scaffold0192 (1 HSPs)
scaffold0192 (405-458)||(18730-18783)


Alignment Details
Target: chr8 (Bit Score: 406; Significance: 0; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 12 - 477
Target Start/End: Complemental strand, 391893 - 391428
Alignment:
Q  12 atgaagggggtctaaaatagaaatcttctttacaaattattacgatcgaagcccatgttagaacaaggaaagggcttgtagcagtgaatccgaataataa 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  391893 atgaggggggtctaaaatagaaatcttctttacaaattattacgagtgaagcccatgttagaacaaggaaagggcttgtagcagtgaattccaataataa 391794  T
Q  112 gaattgaattgatgttatttatgattggaatttttcactatcaatttagaaaattgttttttacacatctaaacgttcttaaaaacatatgaaaaatacg 211  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  391793 gaattgaattgatgttatttatcattggaatttttcactatcaatttagaaaattgttttttacacatctaaactttcttaaaaacacatgaaaaatacg 391694  T
Q  212 tttttacctccaacggtacttaactaccatttgatcattttagaggtagttaactatcgttcgcttatattatctaacggtagttaactaccattacgat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  391693 tttttacctccaacggtacttaactaccatttgatcattttagaggtagttaactatcgtacgcttatattatctaacggtagttaactaccgttacgat 391594  T
Q  312 ctagacatattccatattgcaatagcagttaaccatttgcatgtaaacactcaaactctaccaaattcacacaatctttttcacgaaaatcatccaaatt 411  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  391593 ctagacatattccatatcgcaatagcaattaaccatttgcatgtaaacactcaaactctatcaaattcacccgatctttttcacgaaaatcatccaaatt 391494  T
Q  412 tcttcaacaaaatcataagtaagtaatcctaatgctattaacatacaatgtaatttgtatagtgtg 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  391493 tcttcaacaaaatcataagtaagtaatcctaatgctattaacatacaatgtaatttgtatagtgtg 391428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 458
Target Start/End: Original strand, 8751291 - 8751354
Alignment:
Q  395 cgaaaatcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||    
T  8751291 cgaaattcatccaaatttattcaacaaaatcacaagtaagtaatcatagtgctattaacataca 8751354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 458
Target Start/End: Original strand, 27782936 - 27783036
Alignment:
Q  360 actcaaactctaccaaattcacacaatct--ttttcacgaaaatcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacatac 457  Q
    ||||||| |||| |||| |||||||||||  ||||  ||||| |||||||||||| ||||||||||||| |||||||||||  || || |||||||||||    
T  27782936 actcaaaatctatcaaaatcacacaatctcattttttcgaaattcatccaaatttattcaacaaaatcacaagtaagtaataatagtgttattaacatac 27783035  T
Q  458 a 458  Q
    |    
T  27783036 a 27783036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 1192706 - 1192791
Alignment:
Q  157 ttagaaaattgttttttacacatctaaacgttcttaaaaacatatgaaaaatacgtttttacctccaacggtacttaactaccatt 242  Q
    ||||| ||||| ||||||||||| | ||| |||||||||||| ||||||| ||||||||| | ||||||| || ||||| ||||||    
T  1192706 ttagagaattgctttttacacatgtgaactttcttaaaaacacatgaaaagtacgtttttgcttccaacgatagttaacgaccatt 1192791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 24860551 - 24860604
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  24860551 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 24860604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 42602627 - 42602675
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaac 453  Q
    |||||||| ||||||||||||| |||||||||||  |||||||||||||    
T  42602627 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaac 42602675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 27652984 - 27653039
Alignment:
Q  187 ttcttaaaaacatatgaaaaatacgtttttacctccaacggtacttaactaccatt 242  Q
    |||||||||||| ||||||||||| ||||| |||||  ||||| ||||||||||||    
T  27652984 ttcttaaaaacacatgaaaaatacattttttcctccggcggtagttaactaccatt 27653039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 17773000 - 17773050
Alignment:
Q  189 cttaaaaacatatgaaaaatacgtttttacctccaacggtacttaactacc 239  Q
    |||||||||| |||||||  ||||||||||| ||||||||| |||||||||    
T  17773000 cttaaaaacacatgaaaatgacgtttttacccccaacggtagttaactacc 17773050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 3396046 - 3396099
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||| ||||  ||||||||||||| ||||    
T  3396046 ccaaatttattcaacaaaatcacaagtaaataattataatgctattaacttaca 3396099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 41858017 - 41857964
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| ||| |||||||  ||||||||||||| ||||    
T  41858017 ccaaatttattcaacaaaatcacaagaaagtaattataatgctattaacttaca 41857964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 485924 - 485880
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  485924 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 485880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 18441327 - 18441283
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  18441327 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 18441283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 28991475 - 28991523
Alignment:
Q  187 ttcttaaaaacatatgaaaaatacgtttttacctccaacggtacttaac 235  Q
    |||||||||||| ||||||||||| ||||| || ||||||||| |||||    
T  28991475 ttcttaaaaacacatgaaaaatacatttttgcccccaacggtagttaac 28991523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 473
Target Start/End: Complemental strand, 7576830 - 7576746
Alignment:
Q  389 ttttcacgaaaatcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacatacaatgtaatttgtatag 473  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||| ||||| ||||||||||| || |||||||||    
T  7576830 ttttcacgaaattcatccaaatttcttcaacaaaatcacaagtaagcaattctagtgctaataacatacaatttagtttgtatag 7576746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 453
Target Start/End: Original strand, 37396248 - 37396312
Alignment:
Q  389 ttttcacgaaaatcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaac 453  Q
    ||||||||||| ||||| |||||||||||||||||| | |||||||||||| || ||||||||||    
T  37396248 ttttcacgaaattcatcaaaatttcttcaacaaaattacaagtaagtaatcatagtgctattaac 37396312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 35928692 - 35928639
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||    
T  35928692 ccaaatttattcaacaaaatcacaagtaagtaatcataatgctattaacttaca 35928639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 458
Target Start/End: Original strand, 20192505 - 20192556
Alignment:
Q  407 aaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||| ||||||||||||| |||||||||||  ||||||||||||||||||    
T  20192505 aaatttattcaacaaaatcacaagtaagtaattataatgctattaacataca 20192556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 34594846 - 34594908
Alignment:
Q  397 aaaatcatccaaatttcttcaacaaaatcataagtaagtaatc-ctaatgctattaacataca 458  Q
    |||||||||||||  | |||| |||||||| |||||||||||| |||||||||||||||||||    
T  34594846 aaaatcatccaaaaattttcatcaaaatcacaagtaagtaatcactaatgctattaacataca 34594908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 1401347 - 1401294
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  1401347 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 1401294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 3600505 - 3600558
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  3600505 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 3600558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 8537354 - 8537407
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  8537354 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 8537407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 11346196 - 11346249
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  11346196 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 11346249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 35564434 - 35564487
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  35564434 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 35564487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 7085123 - 7085199
Alignment:
Q  158 tagaaaattgttttttacacatctaaacgttcttaaaaacatatgaaaaatacgtttttacctccaacggtacttaa 234  Q
    |||||||||| |||| |||||| ||||  |||||||||||| |||||||||||| ||||  | ||||||||| ||||    
T  7085123 tagaaaattgcttttcacacatataaattttcttaaaaacacatgaaaaatacgcttttgtccccaacggtagttaa 7085199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 7929 - 7876
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  7929 ccaactttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 7876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 11027280 - 11027333
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  11027280 ccaacttttttcaacaaaatcacaagtaagtaattataatgctattaacttaca 11027333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 18307420 - 18307473
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  |||| |||||||| ||||    
T  18307420 ccaaatttattcaacaaaatcacaagtaagtaattataatactattaacttaca 18307473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 27662087 - 27662034
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  27662087 ccaactttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 27662034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 28880512 - 28880565
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  28880512 ccaacttttttcaacaaaatcacaagtaagtaatattaatgctattaacttaca 28880565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 30709095 - 30709148
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  30709095 ccaactttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 30709148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 38853657 - 38853710
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  38853657 ccaacttttttcaacaaaatcacaagtaagtaattataatgctattaacttaca 38853710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 42865698 - 42865645
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||| ||||||  ||||||||||||| ||||    
T  42865698 ccaaatttattcaacaaaatcacaagttagtaattataatgctattaacttaca 42865645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 19037344 - 19037300
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  19037344 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 19037300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 20988042 - 20988104
Alignment:
Q  396 gaaaatcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||| |||||    
T  20988042 gaaattcatccaaatttattcaacaaaatcacaagtaagtaatcatagtgctattaaaataca 20988104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 458
Target Start/End: Complemental strand, 40679508 - 40679452
Alignment:
Q  402 catccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  40679508 catccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 40679452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 473
Target Start/End: Complemental strand, 13567311 - 13567231
Alignment:
Q  389 ttttcacgaaaatcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacatacaatgtaatttgtatag 473  Q
    |||| |||||| ||||| ||||| || |||||||||||     |||||||||||||||||||||||||||||||| ||| |||||    
T  13567311 ttttgacgaaattcatcaaaattactccaacaaaatca----caagtaatcctaatgctattaacatacaatgtagtttctatag 13567231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 29093726 - 29093673
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  29093726 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 29093673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 35490803 - 35490856
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  35490803 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 35490856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 458
Target Start/End: Original strand, 43491290 - 43491341
Alignment:
Q  407 aaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  43491290 aaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 43491341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 436
Target Start/End: Complemental strand, 13562369 - 13562295
Alignment:
Q  362 tcaaactctaccaaattcacacaatctttttcacgaaaatcatccaaatttcttcaacaaaatcataagtaagta 436  Q
    ||||||||||||||| ||||    || ||||||||||| ||||||||||| || ||| ||||||| |||||||||    
T  13562369 tcaaactctaccaaaatcaccagctcattttcacgaaattcatccaaattactccaaaaaaatcaaaagtaagta 13562295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 10365686 - 10365633
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||| ||||||| ||||    
T  10365686 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaacttaca 10365633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 16580666 - 16580719
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||| ||||||| ||||    
T  16580666 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaacttaca 16580719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 26858351 - 26858404
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| || ||||||||  ||||||||||||| ||||    
T  26858351 ccaaatttattcaacaaaatcacaactaagtaattataatgctattaacttaca 26858404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 28747621 - 28747572
Alignment:
Q  401 tcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctatt 450  Q
    |||||||||||| ||||||||||||| |||||||| ||| || |||||||    
T  28747621 tcatccaaatttattcaacaaaatcacaagtaagttatcatagtgctatt 28747572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 39393217 - 39393270
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| |||| |||||||| |||||||||||  ||||||||||||| ||||    
T  39393217 ccaaatttattcaccaaaatcacaagtaagtaattataatgctattaacttaca 39393270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 39800540 - 39800487
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  39800540 ccaacttttttcaacaaaatcacaagtaagtaattataatgctattaacttaca 39800487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 41500118 - 41500065
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||| ||||||||| ||||    
T  41500118 ccaaatttattcaacaaaatcacaagtaagtaattataacgctattaacttaca 41500065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 2648298 - 2648342
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  2648298 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 2648342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 3937726 - 3937682
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  3937726 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 3937682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 24512355 - 24512403
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaac 453  Q
    |||| ||| ||||||||||||| |||||||||||  |||||||||||||    
T  24512355 ccaagtttattcaacaaaatcacaagtaagtaattataatgctattaac 24512403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 43982398 - 43982442
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  43982398 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 43982442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 26856072 - 26856125
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||    
T  26856072 ccaaatttattcaacaaaatcacaagtaagtaatcataatgctattaacttaca 26856125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 30765839 - 30765786
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||| || |||||||||||||||    
T  30765839 ccaaatttattcaacaaaatcacaagtaagtaatcatagtgctattaacataca 30765786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 17523943 - 17523906
Alignment:
Q  397 aaaatcatccaaatttcttcaacaaaatcataagtaag 434  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17523943 aaaatcatccaaatttcctcaacaaaatcataagtaag 17523906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 29065906 - 29065959
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  29065906 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 29065959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 29074919 - 29074972
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  29074919 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 29074972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 29079683 - 29079736
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  29079683 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 29079736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 29107492 - 29107545
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  29107492 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 29107545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 20242972 - 20242919
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  || |||||||||| ||||    
T  20242972 ccaaatttattcaacaaaatcacaagtaagtaataatagtgctattaacttaca 20242919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 22136956 - 22136903
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  || |||||||||| ||||    
T  22136956 ccaaatttattcaacaaaatcacaagtaagtaataatagtgctattaacttaca 22136903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 29061448 - 29061501
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||   |||||||||||| ||||    
T  29061448 ccaaatttattcaacaaaatcacaagtaagtaattacaatgctattaacttaca 29061501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 32034288 - 32034235
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| |||| |||||||| |||||||||||  ||||||||||||| ||||    
T  32034288 ccaaatttattcagcaaaatcacaagtaagtaattataatgctattaacttaca 32034235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 6205026 - 6205070
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  6205026 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 6205070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 11691993 - 11692037
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  11691993 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 11692037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 22305304 - 22305352
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaac 453  Q
    |||| ||| ||||||||||||| |||||||||||  |||||||||||||    
T  22305304 ccaacttttttcaacaaaatcacaagtaagtaattataatgctattaac 22305352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 27639724 - 27639768
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  27639724 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 27639768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 958501 - 958453
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaac 453  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||||    
T  958501 ccaaatttattcaacaaaatcataagtaagtaattataatgctattaac 958453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 455
Target Start/End: Complemental strand, 8876823 - 8876773
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacat 455  Q
    |||||||| ||||||||||||| |||||||||||| || ||||||||||||    
T  8876823 ccaaatttattcaacaaaatcacaagtaagtaatcatagtgctattaacat 8876773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 24074654 - 24074707
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||  |||||||||||| |||||||||||| || |||||||||||||||    
T  24074654 ccaaatttactcaacaaaatcacaagtaagtaatcatagtgctattaacataca 24074707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 25143586 - 25143639
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||| ||||  ||||||||||||    
T  25143586 ccaaatttattcaacaaaatcacaagtaagtaatcataataatattaacataca 25143639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 44561224 - 44561171
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  44561224 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 44561171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 458
Target Start/End: Complemental strand, 34154320 - 34154269
Alignment:
Q  407 aaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  34154320 aaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 34154269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 41535015 - 41534972
Alignment:
Q  187 ttcttaaaaacatatgaaaaatacgtttttacctccaacggtac 230  Q
    |||||||||||| |||| |||||||||||||||| |||||||||    
T  41535015 ttcttaaaaacacatgacaaatacgtttttaccttcaacggtac 41534972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 452
Target Start/End: Original strand, 56138430 - 56138477
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaa 452  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||    
T  56138430 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaa 56138477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 458
Target Start/End: Complemental strand, 11866822 - 11866776
Alignment:
Q  412 tcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||| ||||||||||||||| || |||||||||||||||    
T  11866822 tcttcaaccaaaacataagtaagtaatcatactgctattaacataca 11866776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 243239 - 243186
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| || ||||||||  ||||||||||||| ||||    
T  243239 ccaaatttattcaacaaaatcacaattaagtaattataatgctattaacttaca 243186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 4786235 - 4786182
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||  ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  4786235 ccaaattaattcaacaaaatcacaagtaagtaattataatgctattaacttaca 4786182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 6283369 - 6283316
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  | ||||||||||| ||||    
T  6283369 ccaaatttattcaacaaaatcacaagtaagtaattatgatgctattaacttaca 6283316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 11287661 - 11287714
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| |||||| ||| || |||||||||||| ||||||||||||| ||||    
T  11287661 ccaaatttattcaacgaaaccacaagtaagtaatcataatgctattaacttaca 11287714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 13182001 - 13181948
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  13182001 ccaacttttttcaacaaaatcacaagtaagtaattataatgctattaacttaca 13181948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 21017886 - 21017833
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  21017886 ccaactttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 21017833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 28081647 - 28081700
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  28081647 ccaactttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 28081700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 29700206 - 29700153
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||| ||||||| ||||    
T  29700206 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaacttaca 29700153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 40354483 - 40354430
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  40354483 ccaactttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 40354430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 51429233 - 51429180
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||| ||||||| ||||    
T  51429233 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaacttaca 51429180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 458
Target Start/End: Original strand, 1042114 - 1042166
Alignment:
Q  406 caaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||| |||||||||| || |||||||||||  ||||||||||||| ||||    
T  1042114 caaatttattcaacaaaaccacaagtaagtaattataatgctattaacttaca 1042166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 6177984 - 6177940
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  6177984 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 6177940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 41795230 - 41795186
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  41795230 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 41795186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 49094283 - 49094327
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  49094283 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 49094327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 3287866 - 3287793
Alignment:
Q  160 gaaaattgttttttacacatctaaacgttcttaaaaacatatgaaaaatacgtttttacctccaacggtacttaac 235  Q
    ||||||||||||||||||||   ||| |||||||||| | ||||||||||| |||||||||||| ||||| |||||    
T  3287866 gaaaattgttttttacacatg--aactttcttaaaaatacatgaaaaatacatttttacctccagcggtagttaac 3287793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 13972239 - 13972292
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  13972239 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 13972292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 24364611 - 24364558
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||| ||| ||||||||||||| ||||    
T  24364611 ccaaatttattcaacaaaatcacaagtaagtgatcataatgctattaacttaca 24364558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 26637147 - 26637094
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  26637147 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 26637094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 27487571 - 27487518
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||| |||||||||||||||||||  ||||||||||||| ||||    
T  27487571 ccaaatttattcaataaaatcataagtaagtaattataatgctattaacttaca 27487518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 49927408 - 49927355
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  49927408 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 49927355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 19445065 - 19445015
Alignment:
Q  189 cttaaaaacatatgaaaaatacgtttttacctccaacggtacttaactacc 239  Q
    |||||||||| |||||||  ||||||||||| ||||||||| |||||||||    
T  19445065 cttaaaaacacatgaaaatgacgtttttacccccaacggtagttaactacc 19445015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 6434935 - 6434988
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||| ||||  ||||||||||||| ||||    
T  6434935 ccaaatttattcaacaaaatcacaagtaaataattataatgctattaacttaca 6434988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 14174807 - 14174754
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||| ||||  ||||||||||||| ||||    
T  14174807 ccaaatttattcaacaaaatcacaagtaaataattataatgctattaacttaca 14174754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 19159815 - 19159868
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  19159815 ccaactttattcaacaaaatcaaaagtaagtaattataatgctattaacttaca 19159868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 19263342 - 19263289
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||| ||||||| |||||||||||| || | |||||||||||||    
T  19263342 ccaaatttattcaaaaaaatcacaagtaagtaatcatagttctattaacataca 19263289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 29709210 - 29709157
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||| ||||||| ||||    
T  29709210 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaacttaca 29709157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 35526918 - 35526865
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||| ||||||| ||||    
T  35526918 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaacttaca 35526865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 49395767 - 49395820
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  |||| |||||||| ||||    
T  49395767 ccaaatttattcaacaaaatcacaagtaagtaattataatactattaacttaca 49395820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 49426876 - 49426929
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||| ||||  ||||||||||||| ||||    
T  49426876 ccaaatttattcaacaaaatcacaagtaaataattataatgctattaacttaca 49426929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 13635999 - 13635951
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaac 453  Q
    |||| ||| ||||||||||||| |||||||||||  |||||||||||||    
T  13635999 ccaacttttttcaacaaaatcacaagtaagtaattataatgctattaac 13635951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 29435138 - 29435186
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaac 453  Q
    |||||||| ||||||||||||| |||||||||||  ||||| |||||||    
T  29435138 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaac 29435186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 469
Target Start/End: Complemental strand, 1804913 - 1804839
Alignment:
Q  395 cgaaaatcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacatacaatgtaatttgt 469  Q
    |||||||||||| |||||||||||  |||||| |||||||| ||| |||| ||||| |||| ||||||| |||||    
T  1804913 cgaaaatcatcctaatttcttcaagtaaatcacaagtaagtcatcttaatcctatttacatgcaatgtagtttgt 1804839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 17838839 - 17838892
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  17838839 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 17838892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 42682182 - 42682235
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  42682182 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 42682235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 45364124 - 45364071
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  45364124 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 45364071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 48316217 - 48316164
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  48316217 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 48316164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 3381480 - 3381428
Alignment:
Q  406 caaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||| ||||||||||||| |||||||||||| || |||||||||| ||||    
T  3381480 caaatttattcaacaaaatcacaagtaagtaatcatagtgctattaacttaca 3381428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 28115427 - 28115379
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaac 453  Q
    |||||||| ||||||||||||| |||||||||||  |||||||||||||    
T  28115427 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaac 28115379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 40587840 - 40587888
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaac 453  Q
    |||||||| ||||||||||||| |||||||||||  |||||||||||||    
T  40587840 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaac 40587888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 458
Target Start/End: Original strand, 34140060 - 34140111
Alignment:
Q  407 aaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  34140060 aaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 34140111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 452
Target Start/End: Original strand, 41047956 - 41048003
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaa 452  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||    
T  41047956 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaa 41048003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 7066244 - 7066297
Alignment:
Q  401 tcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaaca 454  Q
    |||||||||||| ||||||| ||||| |||||||||||| || || ||||||||    
T  7066244 tcatccaaatttattcaacagaatcacaagtaagtaatcatagtgttattaaca 7066297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 21649912 - 21649965
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||  ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  21649912 ccaaattaattcaacaaaatcacaagtaagtaattataatgctattaacttaca 21649965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 28980066 - 28980013
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||| ||||||| ||||    
T  28980066 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaacttaca 28980013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 30355135 - 30355082
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||| ||||||| ||||    
T  30355135 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaacttaca 30355082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 48269820 - 48269873
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||| ||||  ||||||||||||| ||||    
T  48269820 ccaaatttattcaacaaaatcacaagtaaataattataatgctattaacttaca 48269873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 9367598 - 9367554
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  9367598 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 9367554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 4095326 - 4095376
Alignment:
Q  401 tcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctatta 451  Q
    |||||||| ||||||||||||||||| |||||||||||| || ||||||||    
T  4095326 tcatccaagtttcttcaacaaaatcacaagtaagtaatcatagtgctatta 4095376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 17267999 - 17267937
Alignment:
Q  396 gaaaatcatccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| |||||||||||  ||||||||||||| |||||||||||| || ||||||||| |||||    
T  17267999 gaaattcatccaaattaattcaacaaaatcacaagtaagtaatcatagtgctattaagataca 17267937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 4004697 - 4004644
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  4004697 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 4004644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 19454247 - 19454194
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  19454247 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 19454194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 24703313 - 24703260
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  24703313 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 24703260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 34694317 - 34694264
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  34694317 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 34694264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 41803167 - 41803220
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  41803167 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 41803220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 49609551 - 49609604
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  49609551 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 49609604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 458
Target Start/End: Original strand, 2426651 - 2426703
Alignment:
Q  406 caaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  2426651 caaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 2426703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 52570452 - 52570400
Alignment:
Q  406 caaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  52570452 caaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 52570400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 458
Target Start/End: Original strand, 20366374 - 20366425
Alignment:
Q  407 aaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||| ||||||||| |||||||||||||||  ||||||||||||| ||||    
T  20366374 aaatttattcaacaaattcataagtaagtaattataatgctattaacttaca 20366425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 2271197 - 2271144
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||| ||||| ||||    
T  2271197 ccaaatttattcaacaaaatcacaagtaagtaattataatgctgttaacttaca 2271144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 2647583 - 2647530
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||| ||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  2647583 ccaactttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 2647530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 13896760 - 13896707
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||| ||||||| ||||    
T  13896760 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaacttaca 13896707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 36134512 - 36134565
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||| ||||||| ||||    
T  36134512 ccaaatttattcaacaaaatcacaagtaagtaattataatgttattaacttaca 36134565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 49219686 - 49219633
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||| ||  ||||||||||||| ||||    
T  49219686 ccaaatttattcaacaaaatcacaagtaagtgattataatgctattaacttaca 49219633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 50343456 - 50343403
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||| || || |||||| |||||    
T  50343456 ccaaatttattcaacaaaatcacaagtaagtaatcatagtgttattaatataca 50343403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 51402305 - 51402252
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| ||| |||||||  ||||||||||||| ||||    
T  51402305 ccaaatttattcaacaaaatcacaagcaagtaattataatgctattaacttaca 51402252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 51696479 - 51696426
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||| ||||||| |||||||||||  ||||||||||||| ||||    
T  51696479 ccaaatttattcaagaaaatcacaagtaagtaattataatgctattaacttaca 51696426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 55207547 - 55207494
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| | ||||||||||| |||||||||||  ||||||||||||| ||||    
T  55207547 ccaaatttatccaacaaaatcacaagtaagtaattataatgctattaacttaca 55207494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 33798458 - 33798379
Alignment:
Q  356 aaacactcaaactctaccaaattcacacaatct--ttttcacgaaaatcatccaaatttcttcaacaaaatcataagtaa 433  Q
    |||| |||||| ||||||||| |||| ||| ||  | ||||||||  |||||||||||||| ||||||||||| ||||||    
T  33798458 aaactctcaaattctaccaaaatcacccaaactcatcttcacgaagttcatccaaatttctccaacaaaatcacaagtaa 33798379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 34049279 - 34049323
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  34049279 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 34049323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 46402555 - 46402599
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  46402555 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 46402599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 54389994 - 54390038
Alignment:
Q  414 ttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  54389994 ttcaacaaaatcacaagtaagtaattataatgctattaacttaca 54390038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 12272 - 12219
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  12272 ccaaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 458
Target Start/End: Original strand, 985 - 1036
Alignment:
Q  407 aaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||| ||||||||||||| |||||||||||  ||||||||||||| ||||    
T  985 aaatttattcaacaaaatcacaagtaagtaattataatgctattaacttaca 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 18783 - 18730
Alignment:
Q  405 ccaaatttcttcaacaaaatcataagtaagtaatcctaatgctattaacataca 458  Q
    |||||||| ||||||||||||| || ||||||||  ||||||||||||| ||||    
T  18783 ccaaatttattcaacaaaatcacaaataagtaattataatgctattaacttaca 18730  T

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