View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19522_low_26 (Length: 263)
Name: NF19522_low_26
Description: NF19522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19522_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 3768421 - 3768654
Alignment:
| Q |
19 |
caagatgatcaaatatgatcttgtcaaaggtccgccatggaacgttttttgtgtccatctttggcatatttggagagagctgaatttcttgatctttggt |
118 |
Q |
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| T |
3768421 |
caagatgatcaaatatgatcttgtcaaaggtccgccatggaacgttttttgtgtccatctttggcatatttggagagagctgaatttcttgatctttggt |
3768520 |
T |
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| Q |
119 |
ataaattcctgtaatagataaataaaatcattagtactctgacatttttacttttactactggtaattaacttagaatccaaggcgagtaatgtgaaact |
218 |
Q |
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|||||||||||||||||| |||| |||||||||| ||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| |
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| T |
3768521 |
ataaattcctgtaatagaaaaattaaatcattagaactctgatatttttacttttactactagtaattaactgagactccaaggcgagtaatgtgaaact |
3768620 |
T |
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| Q |
219 |
gaatccttgatcccctgcaaagaactattttcat |
252 |
Q |
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|||||||||||| ||||||||||||||||||||| |
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| T |
3768621 |
gaatccttgatctcctgcaaagaactattttcat |
3768654 |
T |
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