View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19522_low_30 (Length: 245)
Name: NF19522_low_30
Description: NF19522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19522_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 12 - 227
Target Start/End: Original strand, 41813377 - 41813591
Alignment:
| Q |
12 |
agagaaaattatgtattagtggccacaaattctctttagtaacatgtatacattgtatatctcttgtaaagttaacaaaattaattaaatgctttgtgca |
111 |
Q |
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| T |
41813377 |
agagaaaattatgtattagtggccacaaatactcttaagtaacatgtatacattgtatatctcttgtaaagttaacaaaattaattaaatgctttgtgca |
41813476 |
T |
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| Q |
112 |
ttgttttttaataaaatgctttgtttgaataactattgtaaaagaaaattctattataaaagttgatcaatgttaatttcattttgactttttagtttaa |
211 |
Q |
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| T |
41813477 |
ttgttttttaataaaatgctttgtttgaataactattgtataagaaaattctattataaaagttgatcaatgttaatttcattttgac-ttttagtttaa |
41813575 |
T |
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| Q |
212 |
tttgtatgcaccaata |
227 |
Q |
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| T |
41813576 |
tttgtatgcaccaata |
41813591 |
T |
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