View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19522_low_36 (Length: 212)
Name: NF19522_low_36
Description: NF19522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19522_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 25682478 - 25682297
Alignment:
| Q |
14 |
cagagacagcacagcatcacatttcacagtctcacacacatgacatcctctgctagctactcactgctgtctattaattcatacatttcttactgctttt |
113 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25682478 |
cagagacagcacagcatcacatttcacagtctctcacacatgacatcctctgctagctactcactgctgtctattaattcatacatttcttactgctttt |
25682379 |
T |
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| Q |
114 |
cagctatgtatagctggtaattaatatatttgcaatagtatagtattatataagtaattgttaggttttaacccttcgactt |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25682378 |
cagctatgtatagctggtaattaatatatttgcaatagtatagtattatataagtaattgttaggttttaacccttcgactt |
25682297 |
T |
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