View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19525_low_12 (Length: 215)
Name: NF19525_low_12
Description: NF19525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19525_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 38109782 - 38109963
Alignment:
| Q |
13 |
gaaaataacagtgatagatataaatacgtatttcatactactttcgtccttaaatataaaacttactccatgtatactaccaccaaagtaatattaaatt |
112 |
Q |
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| T |
38109782 |
gaaaataacagtgatagatataaatacgtatttcatactactttcatccttaaatataaaacttactccatgtatactaccaccaaagtaatattaaatt |
38109881 |
T |
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| Q |
113 |
tgtcgataatcaatgttatgttacatgtttactcttaagatagaaagagagaattaatttatatttccattgcaacatttgt |
194 |
Q |
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| T |
38109882 |
tgtcgataatcaatgttatgttacgtgtttactcttaagatagaaagagagaattaatttatatttccattgcaacatttgt |
38109963 |
T |
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