View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19525_low_5 (Length: 334)

Name: NF19525_low_5
Description: NF19525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19525_low_5
NF19525_low_5
[»] chr6 (49 HSPs)
chr6 (19-320)||(25316494-25316798)
chr6 (19-320)||(26203988-26204292)
chr6 (1-264)||(6407773-6408032)
chr6 (1-249)||(11570661-11570906)
chr6 (1-259)||(12688899-12689154)
chr6 (1-262)||(8747707-8747964)
chr6 (1-262)||(2700019-2700277)
chr6 (1-261)||(33687515-33687772)
chr6 (1-161)||(17964471-17964632)
chr6 (1-161)||(16836068-16836229)
chr6 (60-263)||(21308958-21309154)
chr6 (1-208)||(29892173-29892381)
chr6 (11-260)||(12406275-12406531)
chr6 (1-215)||(14508952-14509166)
chr6 (1-208)||(20748197-20748404)
chr6 (1-207)||(24589077-24589283)
chr6 (111-261)||(19674239-19674385)
chr6 (1-112)||(11534623-11534735)
chr6 (1-112)||(11560133-11560245)
chr6 (121-255)||(11427975-11428106)
chr6 (28-204)||(13736617-13736794)
chr6 (46-208)||(11614049-11614212)
chr6 (1-132)||(4157281-4157413)
chr6 (146-261)||(11534736-11534847)
chr6 (146-261)||(11560246-11560357)
chr6 (1-161)||(22609589-22609750)
chr6 (46-197)||(22695228-22695380)
chr6 (88-179)||(19478153-19478243)
chr6 (11-124)||(19995325-19995439)
chr6 (107-172)||(35129640-35129704)
chr6 (4-207)||(9751724-9751928)
chr6 (1-59)||(11428134-11428192)
chr6 (109-159)||(12851836-12851886)
chr6 (107-161)||(32815082-32815135)
chr6 (88-179)||(12183000-12183091)
chr6 (88-179)||(13605092-13605182)
chr6 (17-115)||(15991668-15991767)
chr6 (17-115)||(15999330-15999429)
chr6 (88-179)||(22698243-22698333)
chr6 (88-179)||(31981565-31981655)
chr6 (88-179)||(34142085-34142175)
chr6 (88-179)||(34154701-34154791)
chr6 (90-179)||(3901917-3902006)
chr6 (192-258)||(17964634-17964696)
chr6 (88-179)||(5600972-5601063)
chr6 (66-129)||(2760233-2760293)
chr6 (88-161)||(10642732-10642805)
chr6 (252-300)||(15991901-15991948)
chr6 (252-300)||(15999563-15999610)
[»] chr4 (66 HSPs)
chr4 (1-303)||(51697798-51698099)
chr4 (1-306)||(37259789-37260090)
chr4 (1-306)||(31273403-31273704)
chr4 (1-263)||(37264476-37264735)
chr4 (1-259)||(31268962-31269217)
chr4 (1-261)||(8693637-8693894)
chr4 (1-261)||(16420956-16421212)
chr4 (1-261)||(5928131-5928388)
chr4 (1-263)||(5271331-5271588)
chr4 (1-261)||(19101903-19102160)
chr4 (1-264)||(55251644-55251902)
chr4 (28-261)||(8030415-8030645)
chr4 (1-264)||(13521902-13522165)
chr4 (1-262)||(12823813-12824065)
chr4 (1-243)||(13059354-13059592)
chr4 (15-277)||(32082017-32082274)
chr4 (1-263)||(47244169-47244431)
chr4 (1-173)||(31729299-31729472)
chr4 (1-320)||(19106488-19106791)
chr4 (1-215)||(33463269-33463483)
chr4 (1-256)||(33468886-33469137)
chr4 (17-201)||(42758683-42758868)
chr4 (71-237)||(31765832-31765998)
chr4 (4-209)||(2819818-2820024)
chr4 (28-245)||(47574566-47574781)
chr4 (113-255)||(51696931-51697072)
chr4 (1-208)||(12878214-12878420)
chr4 (1-211)||(19906223-19906432)
chr4 (1-193)||(48276562-48276749)
chr4 (1-208)||(4550973-4551180)
chr4 (41-208)||(12874514-12874682)
chr4 (1-196)||(19541073-19541269)
chr4 (154-306)||(32221163-32221310)
chr4 (97-208)||(13065777-13065888)
chr4 (82-162)||(16953106-16953186)
chr4 (16-158)||(16948030-16948169)
chr4 (8-209)||(32545068-32545270)
chr4 (1-101)||(8649543-8649643)
chr4 (1-101)||(8661350-8661450)
chr4 (88-179)||(653048-653138)
chr4 (71-172)||(20513118-20513217)
chr4 (85-201)||(1151294-1151411)
chr4 (90-179)||(10120811-10120899)
chr4 (87-172)||(16595933-16596017)
chr4 (108-207)||(6070563-6070662)
chr4 (88-179)||(8083027-8083118)
chr4 (88-179)||(36354181-36354271)
chr4 (88-179)||(36359299-36359389)
chr4 (88-179)||(39999074-39999164)
chr4 (88-179)||(40004032-40004122)
chr4 (88-179)||(53797634-53797724)
chr4 (88-179)||(54343208-54343298)
chr4 (88-179)||(54348362-54348452)
chr4 (198-260)||(55810257-55810315)
chr4 (88-179)||(8980285-8980375)
chr4 (88-179)||(8985405-8985495)
chr4 (88-179)||(13700515-13700605)
chr4 (88-179)||(21299833-21299923)
chr4 (88-179)||(41393250-41393340)
chr4 (1-47)||(41816919-41816966)
chr4 (88-179)||(51019373-51019463)
chr4 (88-179)||(54991491-54991581)
chr4 (71-161)||(33722904-33722992)
chr4 (1-34)||(13065728-13065761)
chr4 (88-161)||(15020466-15020538)
chr4 (216-256)||(13065917-13065957)
[»] chr2 (43 HSPs)
chr2 (1-295)||(25478210-25478503)
chr2 (1-306)||(9180636-9180937)
chr2 (1-304)||(10160638-10160935)
chr2 (1-261)||(1934905-1935162)
chr2 (1-304)||(30650813-30651112)
chr2 (1-261)||(25497238-25497498)
chr2 (8-306)||(30658145-30658438)
chr2 (1-261)||(9189715-9189972)
chr2 (4-261)||(18344357-18344611)
chr2 (1-261)||(19892378-19892635)
chr2 (1-261)||(35601848-35602105)
chr2 (1-261)||(29677694-29677950)
chr2 (4-261)||(31326665-31326918)
chr2 (11-247)||(29677321-29677554)
chr2 (1-261)||(12796851-12797108)
chr2 (49-261)||(35638957-35639166)
chr2 (46-262)||(42926716-42926930)
chr2 (28-237)||(7737790-7737996)
chr2 (1-208)||(21523637-21523839)
chr2 (4-255)||(28603230-28603483)
chr2 (17-207)||(19094422-19094614)
chr2 (1-261)||(30631505-30631765)
chr2 (1-205)||(40847511-40847712)
chr2 (1-261)||(19578327-19578595)
chr2 (1-208)||(17545210-17545419)
chr2 (88-193)||(160031-160136)
chr2 (112-208)||(20711420-20711516)
chr2 (88-172)||(14104602-14104685)
chr2 (6-73)||(17453497-17453564)
chr2 (3-132)||(13291455-13291584)
chr2 (88-176)||(5089286-5089373)
chr2 (88-179)||(42723451-42723541)
chr2 (88-179)||(42728620-42728710)
chr2 (88-179)||(42914647-42914737)
chr2 (88-179)||(44096307-44096397)
chr2 (88-179)||(44754596-44754686)
chr2 (88-179)||(44759762-44759852)
chr2 (170-261)||(15489796-15489883)
chr2 (88-161)||(44957437-44957509)
chr2 (17-119)||(32079443-32079546)
chr2 (88-179)||(40518472-40518562)
chr2 (88-161)||(40392342-40392414)
chr2 (217-262)||(40847735-40847780)
[»] chr3 (58 HSPs)
chr3 (5-320)||(7571134-7571446)
chr3 (1-263)||(23666035-23666294)
chr3 (1-263)||(24038283-24038542)
chr3 (1-306)||(18471888-18472188)
chr3 (1-261)||(39775640-39775897)
chr3 (1-306)||(3692498-3692798)
chr3 (1-256)||(758280-758532)
chr3 (1-271)||(29350154-29350421)
chr3 (1-261)||(14438607-14438864)
chr3 (1-261)||(18467149-18467406)
chr3 (1-262)||(3672509-3672766)
chr3 (1-264)||(20519975-20520235)
chr3 (1-306)||(23661376-23661664)
chr3 (1-262)||(3418917-3419176)
chr3 (6-262)||(8883093-8883345)
chr3 (1-306)||(8887810-8888110)
chr3 (9-256)||(3033573-3033816)
chr3 (1-259)||(49971336-49971591)
chr3 (1-261)||(8069603-8069859)
chr3 (1-215)||(32474591-32474805)
chr3 (1-258)||(55431242-55431496)
chr3 (1-306)||(12965786-12966085)
chr3 (1-261)||(3657152-3657409)
chr3 (1-163)||(27708954-27709117)
chr3 (28-306)||(12112580-12112866)
chr3 (59-259)||(29715570-29715766)
chr3 (8-207)||(12971553-12971752)
chr3 (1-161)||(46964035-46964196)
chr3 (1-119)||(6596270-6596388)
chr3 (1-98)||(2207661-2207759)
chr3 (1-110)||(55325847-55325957)
chr3 (131-261)||(27708803-27708928)
chr3 (1-192)||(25726701-25726897)
chr3 (141-263)||(2207760-2207878)
chr3 (60-208)||(28125090-28125239)
chr3 (86-155)||(20507679-20507748)
chr3 (70-161)||(16013729-16013821)
chr3 (88-172)||(48432420-48432503)
chr3 (88-179)||(13022032-13022122)
chr3 (28-161)||(19276859-19276993)
chr3 (4-128)||(47567111-47567235)
chr3 (88-179)||(20090662-20090752)
chr3 (88-179)||(20095787-20095877)
chr3 (88-179)||(26962064-26962154)
chr3 (88-179)||(33089343-33089433)
chr3 (88-179)||(34129169-34129259)
chr3 (75-172)||(48435816-48435911)
chr3 (88-179)||(17364068-17364160)
chr3 (88-179)||(3476946-3477036)
chr3 (88-179)||(15763030-15763120)
chr3 (88-179)||(15768191-15768281)
chr3 (88-179)||(17368724-17368814)
chr3 (88-179)||(20810377-20810467)
chr3 (88-179)||(53119532-53119622)
chr3 (87-132)||(1741108-1741153)
chr3 (88-161)||(2617256-2617329)
chr3 (88-161)||(38436991-38437063)
chr3 (88-179)||(17357841-17357933)
[»] chr5 (50 HSPs)
chr5 (2-261)||(10759734-10759992)
chr5 (2-306)||(561349-561649)
chr5 (1-262)||(35679788-35680048)
chr5 (1-261)||(7451684-7451941)
chr5 (1-261)||(29167885-29168142)
chr5 (1-261)||(12102950-12103208)
chr5 (2-262)||(556620-556877)
chr5 (1-306)||(39522930-39523232)
chr5 (1-261)||(41587074-41587329)
chr5 (1-261)||(26667198-26667455)
chr5 (1-261)||(26938795-26939052)
chr5 (1-306)||(42001316-42001611)
chr5 (1-265)||(39518332-39518593)
chr5 (4-262)||(12501814-12502070)
chr5 (1-261)||(37248708-37248964)
chr5 (1-259)||(36423565-36423820)
chr5 (1-262)||(6514513-6514770)
chr5 (1-261)||(12045052-12045309)
chr5 (1-256)||(36428640-36428892)
chr5 (1-215)||(36942178-36942392)
chr5 (1-262)||(41996590-41996842)
chr5 (1-215)||(36937424-36937638)
chr5 (1-261)||(3665857-3666114)
chr5 (1-262)||(6155331-6155589)
chr5 (1-254)||(40147828-40148078)
chr5 (1-179)||(32461462-32461640)
chr5 (1-266)||(11981193-11981455)
chr5 (1-261)||(20180975-20181233)
chr5 (14-262)||(12041858-12042102)
chr5 (85-261)||(37652827-37652999)
chr5 (60-207)||(12102803-12102950)
chr5 (29-201)||(16116189-16116362)
chr5 (1-208)||(9911128-9911332)
chr5 (1-200)||(15414794-15414993)
chr5 (1-117)||(4871988-4872104)
chr5 (88-179)||(13582690-13582780)
chr5 (88-179)||(24435869-24435959)
chr5 (85-138)||(37550029-37550082)
chr5 (88-179)||(7805076-7805166)
chr5 (88-179)||(14374140-14374230)
chr5 (71-172)||(18265489-18265588)
chr5 (88-179)||(36253831-36253921)
chr5 (193-261)||(37550106-37550170)
chr5 (87-179)||(1414050-1414141)
chr5 (88-179)||(17510063-17510153)
chr5 (241-306)||(36937638-36937702)
chr5 (1-37)||(1429907-1429943)
chr5 (40-79)||(9726638-9726678)
chr5 (1-37)||(13301395-13301431)
chr5 (87-179)||(24771356-24771447)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-267)||(7024-7287)
[»] chr8 (56 HSPs)
chr8 (1-261)||(33416473-33416729)
chr8 (1-261)||(44925836-44926092)
chr8 (1-263)||(18876279-18876537)
chr8 (1-306)||(17025818-17026117)
chr8 (1-306)||(17556310-17556609)
chr8 (1-304)||(34118350-34118649)
chr8 (1-262)||(31449779-31450036)
chr8 (1-262)||(1807397-1807656)
chr8 (9-209)||(19166608-19166809)
chr8 (4-277)||(38182152-38182420)
chr8 (1-202)||(40125797-40125999)
chr8 (1-211)||(36683551-36683762)
chr8 (1-208)||(24090602-24090805)
chr8 (1-262)||(1910881-1911139)
chr8 (17-207)||(17953800-17953992)
chr8 (17-207)||(15875596-15875787)
chr8 (4-259)||(28559570-28559821)
chr8 (1-179)||(2965634-2965813)
chr8 (4-208)||(23548547-23548752)
chr8 (110-306)||(4238337-4238529)
chr8 (124-265)||(40130722-40130859)
chr8 (110-256)||(4243076-4243218)
chr8 (87-215)||(2355458-2355586)
chr8 (1-111)||(43302604-43302714)
chr8 (51-152)||(12820370-12820472)
chr8 (85-178)||(43302715-43302809)
chr8 (1-117)||(15951467-15951584)
chr8 (71-161)||(34517264-34517351)
chr8 (23-142)||(10933473-10933592)
chr8 (88-179)||(33616727-33616817)
chr8 (88-209)||(29220240-29220359)
chr8 (1-80)||(4238254-4238333)
chr8 (1-80)||(4242993-4243072)
chr8 (88-179)||(19430019-19430109)
chr8 (88-179)||(19435521-19435611)
chr8 (88-179)||(19566168-19566258)
chr8 (88-179)||(19571670-19571760)
chr8 (88-179)||(31030533-31030623)
chr8 (88-179)||(32015705-32015795)
chr8 (182-261)||(19915073-19915148)
chr8 (87-172)||(2469986-2470070)
chr8 (221-257)||(5883913-5883949)
chr8 (60-179)||(7902567-7902686)
chr8 (86-161)||(17793475-17793550)
chr8 (88-179)||(17955789-17955879)
chr8 (229-304)||(40126000-40126074)
chr8 (107-161)||(19954295-19954348)
chr8 (109-170)||(19949832-19949892)
chr8 (124-172)||(4544286-4544334)
chr8 (88-179)||(13584355-13584453)
chr8 (88-179)||(21644081-21644171)
chr8 (82-201)||(24673319-24673438)
chr8 (5-155)||(27415539-27415689)
chr8 (1-46)||(8331270-8331316)
chr8 (1-46)||(34818612-34818658)
chr8 (88-176)||(42514374-42514461)
[»] chr7 (55 HSPs)
chr7 (1-256)||(4930164-4930416)
chr7 (1-262)||(44423049-44423308)
chr7 (1-307)||(8268174-8268477)
chr7 (1-249)||(26341137-26341382)
chr7 (1-276)||(13314148-13314419)
chr7 (17-207)||(4579484-4579675)
chr7 (17-207)||(23246861-23247052)
chr7 (1-179)||(23866072-23866250)
chr7 (5-215)||(44510594-44510804)
chr7 (1-243)||(27238185-27238425)
chr7 (1-264)||(9650877-9651140)
chr7 (1-261)||(8075975-8076226)
chr7 (1-208)||(3357543-3357752)
chr7 (1-201)||(25543275-25543475)
chr7 (1-306)||(10388279-10388589)
chr7 (1-208)||(12254054-12254261)
chr7 (73-204)||(29150913-29151044)
chr7 (1-138)||(12799455-12799593)
chr7 (105-258)||(42627214-42627364)
chr7 (1-306)||(21671066-21671377)
chr7 (1-120)||(30258163-30258283)
chr7 (1-261)||(3879922-3880178)
chr7 (1-204)||(9008142-9008345)
chr7 (17-159)||(6590911-6591054)
chr7 (115-265)||(30256776-30256922)
chr7 (1-113)||(42626503-42626616)
chr7 (1-170)||(3284740-3284911)
chr7 (1-160)||(13142813-13142973)
chr7 (47-208)||(15642209-15642371)
chr7 (1-119)||(26287058-26287176)
chr7 (17-200)||(16372381-16372560)
chr7 (1-161)||(3045587-3045738)
chr7 (42-161)||(45748595-45748716)
chr7 (88-179)||(17495408-17495498)
chr7 (88-179)||(17557716-17557806)
chr7 (88-179)||(24528359-24528449)
chr7 (88-179)||(33238007-33238097)
chr7 (88-179)||(47998980-47999070)
chr7 (101-161)||(25832648-25832708)
chr7 (125-158)||(29478191-29478224)
chr7 (87-179)||(9973467-9973558)
chr7 (91-179)||(28292506-28292592)
chr7 (89-172)||(1289334-1289416)
chr7 (88-179)||(2234630-2234720)
chr7 (88-179)||(16539412-16539502)
chr7 (88-179)||(16626160-16626250)
chr7 (88-179)||(32212654-32212744)
chr7 (88-179)||(33226419-33226509)
chr7 (88-179)||(33243184-33243274)
chr7 (88-179)||(42571950-42572040)
chr7 (88-179)||(43892863-43892953)
chr7 (88-175)||(47993809-47993895)
chr7 (1-46)||(40865266-40865312)
chr7 (108-161)||(6898376-6898428)
chr7 (88-179)||(21081039-21081131)
[»] chr1 (52 HSPs)
chr1 (1-306)||(16649525-16649825)
chr1 (1-263)||(26927634-26927893)
chr1 (1-306)||(51041375-51041674)
chr1 (1-261)||(19798925-19799182)
chr1 (3-266)||(33301094-33301354)
chr1 (1-266)||(40165901-40166163)
chr1 (3-261)||(10135382-10135637)
chr1 (1-262)||(23192731-23192987)
chr1 (1-303)||(10139974-10140279)
chr1 (11-266)||(47451147-47451399)
chr1 (1-256)||(38620624-38620875)
chr1 (6-263)||(16035526-16035784)
chr1 (125-306)||(25855053-25855229)
chr1 (1-261)||(39588279-39588536)
chr1 (5-153)||(8137969-8138118)
chr1 (1-259)||(18784470-18784716)
chr1 (60-261)||(47455358-47455555)
chr1 (110-267)||(3094033-3094187)
chr1 (1-119)||(25843820-25843939)
chr1 (60-208)||(12259971-12260119)
chr1 (1-208)||(11806334-11806542)
chr1 (1-144)||(16833523-16833666)
chr1 (87-172)||(2493817-2493901)
chr1 (88-172)||(12906166-12906248)
chr1 (86-208)||(8900229-8900351)
chr1 (140-263)||(16832025-16832144)
chr1 (182-261)||(25843738-25843813)
chr1 (71-172)||(33380905-33381004)
chr1 (87-179)||(10106108-10106199)
chr1 (73-161)||(5346685-5346773)
chr1 (88-172)||(36724720-36724803)
chr1 (88-179)||(38734280-38734370)
chr1 (75-172)||(23193211-23193306)
chr1 (71-172)||(24159783-24159882)
chr1 (88-161)||(27761839-27761911)
chr1 (1-80)||(3094191-3094270)
chr1 (216-260)||(28434709-28434753)
chr1 (88-179)||(5602425-5602515)
chr1 (88-179)||(5724984-5725074)
chr1 (1-59)||(8267743-8267802)
chr1 (88-179)||(13890818-13890908)
chr1 (88-179)||(36684715-36684805)
chr1 (88-179)||(39747165-39747255)
chr1 (9-161)||(28434495-28434646)
chr1 (107-172)||(31063968-31064032)
chr1 (88-179)||(3584606-3584696)
chr1 (88-179)||(11251113-11251203)
chr1 (88-179)||(26651166-26651256)
chr1 (88-179)||(34318224-34318314)
chr1 (88-179)||(37404416-37404506)
chr1 (124-161)||(25661858-25661895)
chr1 (216-264)||(46696593-46696641)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-261)||(4000-4257)
scaffold0002 (1-262)||(443858-444102)
[»] scaffold0182 (1 HSPs)
scaffold0182 (2-261)||(9800-10056)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-320)||(82932-83248)
[»] scaffold0054 (2 HSPs)
scaffold0054 (1-263)||(25323-25582)
scaffold0054 (23-120)||(29218-29316)
[»] scaffold0057 (1 HSPs)
scaffold0057 (38-263)||(35558-35780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-261)||(165999-166256)
[»] scaffold0008 (1 HSPs)
scaffold0008 (18-208)||(255792-255983)
[»] scaffold2020 (1 HSPs)
scaffold2020 (1-208)||(343-560)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-208)||(164935-165152)
[»] scaffold0128 (1 HSPs)
scaffold0128 (4-161)||(13294-13451)
[»] scaffold1050 (1 HSPs)
scaffold1050 (14-172)||(1151-1309)
[»] scaffold0240 (2 HSPs)
scaffold0240 (85-208)||(3966-4089)
scaffold0240 (1-59)||(4098-4156)
[»] scaffold0184 (1 HSPs)
scaffold0184 (18-201)||(2291-2474)
[»] scaffold0097 (1 HSPs)
scaffold0097 (112-208)||(15259-15355)
[»] scaffold0011 (4 HSPs)
scaffold0011 (88-179)||(1570-1660)
scaffold0011 (88-178)||(7052-7141)
scaffold0011 (60-114)||(155490-155544)
scaffold0011 (17-59)||(146362-146404)
[»] scaffold0018 (1 HSPs)
scaffold0018 (107-172)||(171734-171798)
[»] scaffold0132 (2 HSPs)
scaffold0132 (88-179)||(2772-2862)
scaffold0132 (88-179)||(10732-10822)
[»] scaffold0060 (3 HSPs)
scaffold0060 (88-179)||(37015-37105)
scaffold0060 (1-46)||(47770-47816)
scaffold0060 (1-46)||(52813-52859)
[»] scaffold0055 (1 HSPs)
scaffold0055 (88-179)||(3063-3153)
[»] scaffold0052 (1 HSPs)
scaffold0052 (88-179)||(81382-81472)
[»] scaffold0690 (1 HSPs)
scaffold0690 (1-59)||(5415-5473)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-46)||(45920-45966)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-46)||(152821-152867)
[»] scaffold0594 (1 HSPs)
scaffold0594 (88-179)||(9208-9298)
[»] scaffold0166 (1 HSPs)
scaffold0166 (88-179)||(13740-13830)
[»] scaffold0014 (1 HSPs)
scaffold0014 (88-179)||(31550-31640)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-46)||(1139-1185)
[»] scaffold0015 (1 HSPs)
scaffold0015 (17-161)||(8912-9057)


Alignment Details
Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 19 - 320
Target Start/End: Original strand, 25316494 - 25316798
Alignment:
Q  19 atatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttggag---gcggcgtggttga 115  Q
    ||||||||||||| |||| ||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||   ||||||||||| |    
T  25316494 atatttgagggtgcaattctcgaacagttttctacagtgcatagttaaccgcacggttgtagatgaacttgttttatcctggagacggcggcgtggttca 25316593  T
Q  116 tagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaat 215  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  25316594 tagtttgctttgcacaattttgggcagtgccacaaaacgtcttaaattgagcgacctggtcgcgactcaatctagtaacaatttcggtagataatagaat 25316693  T
Q  216 gaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagttactattaaagtt 315  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25316694 gaatttggaaatccaaatataatagtttggaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagttactattaaagtt 25316793  T
Q  316 cagtt 320  Q
     ||||    
T  25316794 aagtt 25316798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 19 - 320
Target Start/End: Original strand, 26203988 - 26204292
Alignment:
Q  19 atatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttggag---gcggcgtggttga 115  Q
    ||||||||||||| |||| ||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||   ||||||||||| |    
T  26203988 atatttgagggtgcaattctcgaacagttttctacagtgcatagttaaccgcacggttgtagatgaacttgttttatcctggagacggcggcgtggttca 26204087  T
Q  116 tagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaat 215  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  26204088 tagtttgctttgcacaattttgggcagtgccacaaaacgtcttaaattgagcgacctggtcgcgactcaatctagtaacaatttcggtagataatagaat 26204187  T
Q  216 gaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagttactattaaagtt 315  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26204188 gaatttggaaatccaaatataatagtttggaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagttactattaaagtt 26204287  T
Q  316 cagtt 320  Q
     ||||    
T  26204288 aagtt 26204292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 6407773 - 6408032
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    |||||||||||||||||||||||||  ||||||||| | ||||| ||||||||||||  ||||||||||||||||||||| ||||||||||||||| |||    
T  6407773 aagagtggtcttagtaccatatttggaggtgtaattcttgaacggttttctacagtgagtagttaaccgcacagttgtagctgagcttgttttatcctgg 6407872  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||| ||  |||||||||| |||||  |||| ||||||||||||||    
T  6407873 aggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtcttcaagagagcgacctgatcgtgactcaacctagtaacaacttc 6407972  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatt 264  Q
    |||||||||||    ||||||| |||||||||||||| |||||| |||| ||||||||||||||    
T  6407973 ggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaacaatt 6408032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 11570661 - 11570906
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||| ||||| | ||||| |||||||||| | | ||||| ||||||||||||||| ||||||||||||||| ||    
T  11570661 aagagtggtcttagtaccatatttgagggtataattctggaacggttttctacagcggagtagttcaccgcacagttgtagctgagcttgttttatcctg 11570760  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||  |||| |||||||||||||    
T  11570761 gaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactcaacctagtaacaactt 11570860  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaat 249  Q
    ||||||||||||    ||||||  |||||||||||||| |||||||||||    
T  11570861 cggtagataata----gaatttcgaaatccaaatacaacagtttgaaaat 11570906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 12689154 - 12688899
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||| |||||| ||||||| |||||||||||||| ||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||||||| ||    
T  12689154 aagagtcgtcttaataccataattgagggtgtaattgtcgaacggttttctacagtgtagtagttaaccgcacagttgtagctgagcttgttttatcctg 12689055  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||| |||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||  ||| ||||||||| ||  |||| |||||||||||||    
T  12689054 gagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtcttaaagagagtgacctggtcatgactcaacctagtaacaactt 12688955  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaa 259  Q
    |||| |||||||    ||||||| |||||||||||||| ||||||||||| |||||||||    
T  12688954 cggtggataata----gaatttggaaatccaaatacaacagtttgaaaatccaaaaacaa 12688899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 8747964 - 8747707
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||||| || ||||| || ||||||||||||||| ||    
T  8747964 aagagtggtcttagtaccatatt-gaaggtgtaattttcgaacggttttctacagtgcagtagttaaccacatagttgcagctgagcttgttttatcctg 8747866  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||| ||||||||  || ||||||||||||||||||||| |||| |||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  8747865 gaggcggcgttgttgatagcctgtcttgcacaattttgggcagtgtcacggaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 8747766  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    |  |||||||||    ||||||| |||||||||||||| |||||| |||| ||||||||||||    
T  8747765 caatagataata----gaatttggaaatccaaatacaacagtttgtaaatccaaaaacaacaa 8747707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 2700019 - 2700277
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| |||||||||||||||||  ||||||||| |||| ||||||||||||||||| ||||||| || |||||||||| || |||||||||||| ||    
T  2700019 aagagtgatcttagtaccatatttggaggtgtaattctcga-cgattttctacagtgcagtagttaatcgaacagttgtagttgggcttgttttatcctg 2700117  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    || ||||||||||||||||| || ||||||||||||||  ||||||||||||||||||||||  |||||| |||||||||  |||| |||||||||||||    
T  2700118 gaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaactt 2700217  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatac-aatagtttgaaaattcaaaaacaacaa 262  Q
    ||||||||| ||    |||||||||||||||||||| ||  |||||||||||||||||||||||    
T  2700218 cggtagatagta----gaatttgaaaatccaaatactaacggtttgaaaattcaaaaacaacaa 2700277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 33687515 - 33687772
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||| |||||||||||||||||||||||| | ||||| ||||||||||| |||| ||||||||||||||||||||| |||| |||||||||| ||    
T  33687515 aagagtggttttagtaccatatttgagggtgtaaatctcgaaggattttctacaatgcagtagttaaccgcacagttgtagttgagtttgttttatcctg 33687614  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||| |||| ||||||||||| || ||||||||||||||| ||||||||||||||||||||||  |||||||||||| ||   |||| ||| |||||| ||    
T  33687615 gagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacctggtggtaactcaacctaataacaattt 33687714  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||||||||| |     ||||| ||||||||||||||| |||||| |||| |||||||||||    
T  33687715 cggtagataaca----aaatttaaaaatccaaatacaacagtttggaaatccaaaaacaaca 33687772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 17964471 - 17964632
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||| || || |||||||||||| ||    
T  17964471 aagagtggtcttagtaccatatttgaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgggcttgttttatcctg 17964570  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  17964571 gaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaa 17964632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16836068 - 16836229
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| |||||||||||||| ||  ||||||||||||||||| || |||||||||||| ||    
T  16836068 aagagtggtcttagtaccaaatatgagggtgtaattctcgaacggttttctacagtgcagtaactaaccgcacagttgtagctgggcttgttttatcctg 16836167  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16836168 gaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaa 16836229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 60 - 263
Target Start/End: Complemental strand, 21309154 - 21308958
Alignment:
Q  60 tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtctta 159  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  21309154 tagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacgtctta 21309055  T
Q  160 aattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaa 259  Q
    ||  ||||||  |||| |||  |||| ||||||||||||||| |||||||||    ||||||| ||||||||||||   ||||||||||| |||||||||    
T  21309054 aagagagcgatatggtagtgactcaacctagtaacaacttcgatagataata----gaatttggaaatccaaatac---agtttgaaaatccaaaaacaa 21308962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 29892173 - 29892381
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| |||||||||||||||||||||||||| | ||||| | ||||||||| |||| ||||||||| ||||||||||| ||  ||||||||||| ||    
T  29892173 aagagtgatcttagtaccatatttgagggtgtaaatatcgaaaggttttctacaatgcaatagttaaccacacagttgtagctggacttgttttatcctg 29892272  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||| || ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||  ||||||||||  ||||  |||| |||||||||||||    
T  29892273 gaggaggtgtggttgatagtttgtcttgcacaattttgggcagtgccaccaaacttcttaaagagagcgacctgaccgtgactcaacctagtaacaactt 29892372  T
Q  200 cggtagata 208  Q
    || ||||||    
T  29892373 cgatagata 29892381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 11 - 260
Target Start/End: Original strand, 12406275 - 12406531
Alignment:
Q  11 ttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgt 109  Q
    |||||| ||||||||||||| ||| | ||  ||| |||||||| ||||| ||||||||| ||||||||||| ||||| ||||||||| || |||||||||    
T  12406275 ttagtatcatatttgagggtataaatctctcacggttttctacggtgcagtagttaaccacacagttgtagttgagcatgttttatcatgaaggcggcgt 12406374  T
Q  110 ggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagata- 208  Q
    | |||||||| | |||||||||| ||| |||| |||||||||||||||| ||  ||||||||||||||||  ||||||||||||||||||||||| |||     
T  12406375 gattgatagtcttccttgcacaactttaggcactgccacgaaacgtctttaagagagcgacctggtcgtgactcaatctagtaacaacttcggtatatat 12406474  T
Q  209 -----atagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaac 260  Q
         | | ||  || |||||||||||||||||| ||||||||||| ||||||||||    
T  12406475 tctttaaaaaaaaaaattgaaaatccaaatacaacagtttgaaaatccaaaaacaac 12406531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 14509166 - 14508952
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| ||||||| ||||||||||||||||| |||| ||||||| || |||||||||||||||||||||||||||||    
T  14509166 aagaatggtcttggtaccatattggagg-tgtaattctcgaacgattttctacaatgcagtagttaatcgaacagttgtagatgagcttgttttatcttg 14509068  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    || ||||||||||||||| | || ||||||||||||||  ||||| ||||||||||||| ||  ||||||| || || |  ||||  ||| |||||||||    
T  14509067 gaagcggcgtggttgataatctgtcttgcacaattttgaacagtgacacgaaacgtcttgaagagagcgacatgatcataaatcatcctaataacaactt 14508968  T
Q  200 cggtagataatagaat 215  Q
     |||||||||||||||    
T  14508967 tggtagataatagaat 14508952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 20748197 - 20748404
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||| |||||||||||||| ||| ||||||| ||||||  |||||||| ||||| ||||||||||||||||||||||||  ||||||||||  ||    
T  20748197 aagagtggttttagtaccatatttaagg-tgtaattctcgaaccgttttctacggtgcagtagttaaccgcacagttgtagatggacttgttttattctg 20748295  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||||||||||||||||  ||||||||||||||||| |||| ||| ||||| | |||||  | ||||||||||||||  |||| |||||||||||||    
T  20748296 gaggcggcgtggttgatagtcggccttgcacaattttggacagtaccatgaaacatgttaaagagggcgacctggtcgtgactcaacctagtaacaactt 20748395  T
Q  200 cggtagata 208  Q
     | ||||||    
T  20748396 tgatagata 20748404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 24589077 - 24589283
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||| ||  ||||||||||| ||    
T  24589077 aagagtggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacaatgcagtagttaaccgcacagttgtagttggacttgttttatcctg 24589175  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||| |||||||||||||||| |  |||||||||||||||  |||| |||||||||| |||||  |||||| ||| |||||  ||||  ||||||||||||    
T  24589176 gagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcgatctgatcgtgactcaacttagtaacaactt 24589275  T
Q  200 cggtagat 207  Q
    || |||||    
T  24589276 cgatagat 24589283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 261
Target Start/End: Complemental strand, 19674385 - 19674239
Alignment:
Q  111 gttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataat 210  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||  |||| |||||||||||||||||| |||||    
T  19674385 gttgatagtctgtcttgcacaattttgggcagtgccatgaaacgtcttaaagagagtgacctggtcgtgactcaacctagtaacaacttcggtaaataat 19674286  T
Q  211 agaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |    |||||||||||||||||||||| ||||||||||| |||||||||||    
T  19674285 a----gaatttgaaaatccaaatacaacagtttgaaaatccaaaaacaaca 19674239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 11534623 - 11534735
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||| ||||| ||||||||||||||| ||||||||||||||| ||    
T  11534623 aagagtggtcttagtaccatatttgagggtgtaattctggaacggttttctacaatgcagtagttcaccgcacagttgtagttgagcttgttttatcctg 11534722  T
Q  100 gaggcggcgtggt 112  Q
    |||||||||||||    
T  11534723 gaggcggcgtggt 11534735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 11560133 - 11560245
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||| ||||| ||||||||||||||| ||||||||||||||| ||    
T  11560133 aagagtggtcttagtaccatatttgagggtgtaattctggaacggttttctacaatgcagtagttcaccgcacagttgtagttgagcttgttttatcctg 11560232  T
Q  100 gaggcggcgtggt 112  Q
    |||||||||||||    
T  11560233 gaggcggcgtggt 11560245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 255
Target Start/End: Complemental strand, 11428106 - 11427975
Alignment:
Q  121 tgccttgcacaa-ttttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaat 219  Q
    |||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||  |||||||| |||||||||||||| ||||||     |||    
T  11428106 tgccttgcacaacttttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaatctaataacaacttcggtaaataata----aaat 11428011  T
Q  220 ttgaaaatccaaatacaatagtttgaaaattcaaaa 255  Q
    ||||||||||||||||||||||||| |||| |||||    
T  11428010 ttgaaaatccaaatacaatagtttggaaatccaaaa 11427975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 204
Target Start/End: Original strand, 13736617 - 13736794
Alignment:
Q  28 ggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgcctt 126  Q
    ||||||| | ||||||  |||||||||||||| ||||||  |||||| ||||||||| |||||||||||| ||||||| | ||||||| |||| | ||||    
T  13736617 ggtgtaaatctcgaacagttttctacagtgcagtagttattcgcacatttgtagatgtgcttgttttatcctggaggcagtgtggttggtagtcttcctt 13736716  T
Q  127 gcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggta 204  Q
    |||||||||| ||||||||||||||||||| ||||  ||| |||||||| | |  |||| ||||||||||||||||||    
T  13736717 gcacaattttaggcagtgccacgaaacgtcgtaaagagagggacctggtggcgactcaacctagtaacaacttcggta 13736794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 208
Target Start/End: Original strand, 11614049 - 11614212
Alignment:
Q  46 ttttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtg 144  Q
    ||||||| ||||||| ||||||||||||| |||||  || |||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  11614049 ttttctaaagtgcattagttaaccgcacaattgtaattgtgcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtg 11614148  T
Q  145 ccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagata 208  Q
    |||  |||||| |||||  || | ||||  |||||  |||| ||||||||||||||| ||||||    
T  11614149 ccataaaacgttttaaagagaacaacctcatcgtgactcaacctagtaacaacttcgatagata 11614212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 4157281 - 4157413
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| | |||| ||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||| |     
T  4157281 aagagtgatattagcaccatatttaagggtgtaaatttcgaacgattttctacagtgcagtagttaaccgcaccgttgtagctgagtttgttttatccta 4157380  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaa 132  Q
    ||||| | |||||||| ||| || |||||||||    
T  4157381 gaggcagtgtggttgaaagtatgtcttgcacaa 4157413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 11534736 - 11534847
Alignment:
Q  146 cacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttga 245  Q
    ||||||||||||||||  ||||||||||||| ||  |||| |||||||||||||| ||||||||||    ||||||  |||||||||||||| |||||||    
T  11534736 cacgaaacgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttcagtagataata----gaatttcgaaatccaaatacaacagtttga 11534831  T
Q  246 aaattcaaaaacaaca 261  Q
    |||| |||||||||||    
T  11534832 aaatccaaaaacaaca 11534847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 11560246 - 11560357
Alignment:
Q  146 cacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttga 245  Q
    ||||||||||||||||  ||||||||||||| ||  |||| |||||||||||||| ||||||||||    ||||||  |||||||||||||| |||||||    
T  11560246 cacgaaacgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttcagtagataata----gaatttcgaaatccaaatacaacagtttga 11560341  T
Q  246 aaattcaaaaacaaca 261  Q
    |||| |||||||||||    
T  11560342 aaatccaaaaacaaca 11560357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 22609750 - 22609589
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||| || ||||||||| |||| ||||||| |||||   |||||||| ||||| | ||||| | | ||||||||| ||||||||||||||| ||    
T  22609750 aagagtggtcatattaccatattggagg-tgtaattctcgaatagttttctaccgtgcagttgttaatcacgcagttgtagttgagcttgttttatcctg 22609652  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaa-ttttgggcagtgccacgaaacgtcttaaa 161  Q
    |||||||||||  |||||||||  ||| ||||| |||| |||||| |||||||||||||||||    
T  22609651 gaggcggcgtgactgatagtttatcttccacaatttttaggcagtaccacgaaacgtcttaaa 22609589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 197
Target Start/End: Original strand, 22695228 - 22695380
Alignment:
Q  46 ttttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtg 144  Q
    ||||||||| |||| | ||||||||||||||||||| ||  ||||||||||| ||||||||| ||| ||||| || || |||||||||||||| ||| ||    
T  22695228 ttttctacaatgcagtggttaaccgcacagttgtagctgtacttgttttatcgtggaggcggtgtgattgattgtatgtcttgcacaattttgagcaatg 22695327  T
Q  145 ccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaac 197  Q
     |||||||||| |||||  |||| || |  |||||| |||| |||||||||||    
T  22695328 tcacgaaacgtgttaaagagagcaacataatcgtgtctcaacctagtaacaac 22695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 19478243 - 19478153
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  19478243 tgttttatcgtggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 19478153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 19995325 - 19995439
Alignment:
Q  11 ttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgt 109  Q
    ||||||| |||||||||||||||| | ||||| | |||||||| ||| | |||||||||||| |||||||| || ||||||||||||  | ||| | |||    
T  19995325 ttagtacgatatttgagggtgtaaatctcgaaaggttttctacggtgtagtagttaaccgcatagttgtagctgggcttgttttatcccgaaggtgccgt 19995424  T
Q  110 ggttgatagtttgcc 124  Q
    |||||||||| ||||    
T  19995425 ggttgatagtctgcc 19995439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 35129704 - 35129640
Alignment:
Q  107 cgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||  |||||||||    
T  35129704 cgtggttgatagtctgc-ttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacct 35129640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 9751724 - 9751928
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggag 102  Q
    |||||||||||| ||||||| |||| ||||||| ||||| | | |||||||||||| ||||||| |||||| |||||| |   ||| ||||||| |  ||    
T  9751724 agtggtcttagtgccatattggagg-tgtaattctcgaatggtgttctacagtgcagtagttaatcgcacaattgtagttagacttattttatcctacag 9751822  T
Q  103 gcggcgtggttgatagtttgccttgcacaa--ttttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
     || |||| |||||||||  ||||||||||  ||||||| |||||||| ||| ||||||||  |||||| ||  |||||  |||| ||||| |||||||     
T  9751823 acgacgtgattgatagttccccttgcacaattttttgggtagtgccacaaaatgtcttaaagagagcga-ctattcgtgactcaacctagtgacaacttt 9751921  T
Q  201 ggtagat 207  Q
    |||||||    
T  9751922 ggtagat 9751928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11428192 - 11428134
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca 59  Q
    |||||| ||||||||||||||||||| ||||||| | ||||||| ||||||||||||||    
T  11428192 aagagtagtcttagtaccatatttgatggtgtaaatctcgaacggttttctacagtgca 11428134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 12851886 - 12851836
Alignment:
Q  109 tggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtctta 159  Q
    |||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  12851886 tggttgatagtttgccttgcacaattttgggcagtggcgcgaaacatctta 12851836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 32815082 - 32815135
Alignment:
Q  107 cgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  32815082 cgtggttgatagtctgc-ttgcacaattttgggcagtgccgcgaaacgtcttaaa 32815135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 12183000 - 12183091
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||  |||||||| || ||||| |||| | | ||||||||  ||||| |||||| ||||||||||||||  ||||||||||||||||    
T  12183000 tgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 12183091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 13605092 - 13605182
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||||||  ||||| |||||| ||||||||||||||  |||| |||| ||||||    
T  13605092 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtg 13605182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 15991668 - 15991767
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttga 115  Q
    ||||||||||  |||||||| || |||| ||||| |||||||| |||||||| ||||| ||| || ||| ||||||||||| | |||||||| |||||||    
T  15991668 ccatatttgattgtgtaattctcaaacggttttcgacagtgcagtagttaactgcacaattgcagctgaacttgttttatcctagaggcggcttggttga 15991767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 15999330 - 15999429
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttga 115  Q
    ||||||||||  |||||||| || |||| ||||| |||||||| |||||||| ||||| ||| || ||| ||||||||||| | |||||||| |||||||    
T  15999330 ccatatttgattgtgtaattctcaaacggttttcgacagtgcagtagttaactgcacaattgcagctgaacttgttttatcctagaggcggcttggttga 15999429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 22698243 - 22698333
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  22698243 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 22698333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 31981655 - 31981565
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| ||| || |||||| ||||||||||||||   |||||||||||||||    
T  31981655 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 31981565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 34142175 - 34142085
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||| || ||||||||||||||||||   |||||||||||||||    
T  34142175 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-gggtagagccacgaaacgtcttaaagaaagcgacctggtcgtg 34142085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 34154791 - 34154701
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||| || ||||||||||||||||||   |||||||||||||||    
T  34154791 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-gggtagagccacgaaacgtcttaaagaaagcgacctggtcgtg 34154701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 3902006 - 3901917
Alignment:
Q  90 ttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||| ||||||||||| ||||| || | | ||||||||||  ||||  |||||| | ||||||||||||  ||||||||||||||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtg 3901917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 17964634 - 17964696
Alignment:
Q  192 aacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaaca 258  Q
    ||||||||||||||||||||||||    ||| |||||||||||||| |||||| |||| ||||||||    
T  17964634 aacaacttcggtagataatagaat----ttggaaatccaaatacaacagtttggaaatccaaaaaca 17964696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 5600972 - 5601063
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||||||||||||||| ||||| || | | |||| |||||  | ||| |||| | ||||||||||||||   |||||||||||||||    
T  5600972 tgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtg 5601063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 2760233 - 2760293
Alignment:
Q  66 accgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgca 129  Q
    |||||| |||||||  ||||||||||||||| ||||   ||||||||||||||| |||||||||    
T  2760233 accgcaaagttgtatttgagcttgttttatcctgga---ggcgtggttgatagtctgccttgca 2760293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 10642805 - 10642732
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||||||||  |||||||||| ||||| |||| | ||||||||||  | ||  |||||||||||||||||||||    
T  10642805 tgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaa 10642732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 15991901 - 15991948
Alignment:
Q  252 aaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaa 300  Q
    ||||||||||||||| |||| |||||||| ||| |||||||||||||||    
T  15991901 aaaaacaacaatttt-aagaggtttctttctgtcatgtctaccgaagaa 15991948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 15999563 - 15999610
Alignment:
Q  252 aaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaa 300  Q
    ||||||||||||||| |||| |||||||| ||| |||||||||||||||    
T  15999563 aaaaacaacaatttt-aagaggtttctttctgtcatgtctaccgaagaa 15999610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 51698099 - 51697798
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    ||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| |||    
T  51698099 aagagtgatcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcatagttaaccgcacaattgtagttgagcttgttttatcctgg 51698000  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| || |||||||||||||  |||||| |||||||||  |||| ||||||||||||||    
T  51697999 aggcggcgtggttgatagtctgccttgcacaattttgagcagtgtcatgaaacgtcttaaaaagagcgatctggtcgtgactcaacctagtaacaacttc 51697900  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaa 300  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || ||||||||  ||||| |||||||||||||||||||||    
T  51697899 ggtagataatagaatgaatttggaaatccaaatacaatagtttgaaaatccaaaaacaataa-ttttaagatatttctatatgttatgtctaccgaagaa 51697801  T
Q  301 gtt 303  Q
    |||    
T  51697800 gtt 51697798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 37259789 - 37260090
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||| ||    
T  37259789 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctgggcttgttttatcctg 37259888  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||   |||||||||||||||  |||| |||||||||||||    
T  37259889 gaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtcgtgactcaacctagtaacaactt 37259988  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  37259989 cggtagataata----gaatttggaaatccaaatacaacagtttggaaattcaaaaacaacaa-ttttaagacgtttcattatgttatgtctactgaaga 37260083  T
Q  300 agttact 306  Q
    |||||||    
T  37260084 agttact 37260090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 31273704 - 31273403
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||| ||||||||||| || |||||||||||| ||    
T  31273704 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccacacagttgtagctgggcttgttttatcctg 31273605  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  31273604 gaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 31273505  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||  | || || ||||||||||||    
T  31273504 cggtagataata----gaatttggaaatccaaatacaacagtttggaaattcaaaaacaacaa-ttttaagacgtttcaatctgctacgtctaccgaaga 31273410  T
Q  300 agttact 306  Q
    |||||||    
T  31273409 agttact 31273403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 37264476 - 37264735
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||| |||||| || |||||||||||| ||    
T  37264476 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacaattgtagctgggcttgttttatcctg 37264575  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  37264576 gaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 37264675  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaat 263  Q
    || |||||||||    ||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  37264676 cgatagataata----gaatttggaaatccaaatacaacagtttggaaattcaaaaacaacaat 37264735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 31269217 - 31268962
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||| ||| ||||||| ||  ||||||||||| ||    
T  31269217 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccacacggttgtagctggacttgttttatcctg 31269118  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  31269117 gaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 31269018  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaa 259  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| ||||||||||||||    
T  31269017 cggtagataata----gaatttggaaatccaaatacaacagtttggaaattcaaaaacaa 31268962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 8693894 - 8693637
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||| || |||||||||| ||||||||||||||| |     
T  8693894 aagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatcctt 8693795  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || |||||||||||||||| || ||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  8693794 gaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 8693695  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    || |||| ||||    ||||||| |||||||||||||| ||||||||||| |||||||||||    
T  8693694 cgatagacaata----gaatttggaaatccaaatacaacagtttgaaaatccaaaaacaaca 8693637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 16421212 - 16420956
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| || ||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| || |||||||||||| ||    
T  16421212 aagagtggtcttagtaccatattcgaaggtgtaaatctcggacggttttctacagtgcagtagttaaccgcacagttgtagctgggcttgttttatcctg 16421113  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||   ||||||||||||||||  |||| |||||||||||||    
T  16421112 taggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggtcgtgactcaacctagtaacaactt 16421013  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||||||     || ||||| |||||||| |||||| |||| |||||||||||    
T  16421012 cggtagataatagaat-----tggaaatctaaatacaacagtttggaaatccaaaaacaaca 16420956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 5928131 - 5928388
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| | |||||||||||||||||||| ||||||| || ||||||| || || |||||||||||| ||    
T  5928131 aagagtggtcttagtaccatatttggaggtgtaattcttgaacgattttctacagtgcagtagttaatcgaacagttgcagctgggcttgttttatcctg 5928230  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||| |||| |||||||  ||||||||||||||||  |||| || ||||||||||    
T  5928231 gaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatcttaaagagagcgacctggtcgtgactcaacctggtaacaactt 5928330  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    |||||||||| ||||||||||| |||||| ||||  ||||||||||    
T  5928331 cggtagataata----gaatttgaaactccaaatacaacagtttggaaatctaaaaacaaca 5928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 5271331 - 5271588
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||| |||| || |  |||||||||| ||  ||||||||||| ||    
T  5271331 aagagtggtcttagcaccatatttggaggtgtaattctcgaacgattttctacagtgcaatagtgaatcaaacagttgtagttggacttgttttatcctg 5271430  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  5271431 gaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 5271530  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaat 263  Q
    ||||||||||||||||    ||| |||| ||||||  | |||||| |||| |||||||||||||    
T  5271531 cggtagataatagaat----ttggaaattcaaata--acagtttggaaatccaaaaacaacaat 5271588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 19102160 - 19101903
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||  ||||||||||| ||    
T  19102160 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagttggacttgttttatcctg 19102061  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||| ||||||||||||| ||  ||||||||||||| | |||||||||||||||||||||  ||| ||||| ||||||  | || |||||||||||||    
T  19102060 gaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacgtcttaaacagagtgacctcgtcgtgacttaacctagtaacaactt 19101961  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
     | |||||||||    ||||||| |||||||||||||| |||||  |||| |||||||||||    
T  19101960 tgatagataata----gaatttggaaatccaaatacaacagtttataaatccaaaaacaaca 19101903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 55251902 - 55251644
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||  | ||||||| | ||||||| |||||||||||||| |||||||||| |||||||||| || |||||||||||| ||    
T  55251902 aagagtggtcttagtaccatattcaaaggtgtaaatctcgaacggttttctacagtgcagtagttaaccgtacagttgtagttgggcttgttttatcctg 55251803  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||| ||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  55251802 gaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaaa-gagcgacctggtcgtgactcaacctagtaacaactt 55251704  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatt 264  Q
    |  |||||||||||||     || |||||||||||||| |||||| ||||  |||||||||||||    
T  55251703 caatagataatagaat-----tggaaatccaaatacaacagtttggaaatcgaaaaacaacaatt 55251644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 261
Target Start/End: Original strand, 8030415 - 8030645
Alignment:
Q  28 ggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgcctt 126  Q
    ||||||||||||||||| |||||||||||||| ||||||| || ||| |||||| || |||||||||||| ||||||| |||| ||||||||| |  |||    
T  8030415 ggtgtaattttcgaacggttttctacagtgcagtagttaatcgaacatttgtagctgggcttgttttatcctggaggcagcgttgttgatagtctatctt 8030514  T
Q  127 gcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaa 226  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||| | |||  |||| |||||||||||||||||||||||||    |||||||||||    
T  8030515 gcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctgattgtgattcaacctagtaacaacttcggtagataata----gaatttgaaaa 8030610  T
Q  227 tccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    | ||||||||| |||||||||||||||||||||||    
T  8030611 ttcaaatacaacagtttgaaaattcaaaaacaaca 8030645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 13521902 - 13522165
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtaga---tgagcttgttttatc 96  Q
    |||||||||||||||||||||||  | | ||||||| ||||||| |||||||||||||| |||| ||||| ||||||| ||    ||  |||||||||||    
T  13521902 aagagtggtcttagtaccatattaaaag-tgtaattctcgaacggttttctacagtgcagtagtcaaccgtacagttgcagcagctggacttgttttatc 13522000  T
Q  97 ttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaa 196  Q
     |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| ||||||||||    
T  13522001 ctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaa 13522100  T
Q  197 cttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatt 264  Q
    |||||||||| || |||||   || ||||| | |||||||| ||||||||||| ||||||||||||||    
T  13522101 cttcggtagaaaacagaat---ttggaaaaccaaaatacaacagtttgaaaatccaaaaacaacaatt 13522165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 12823813 - 12824065
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| || ||||||| | ||||||| |||||||||||||| |||||| |||||      ||||||  ||||||||||| ||    
T  12823813 aagagtggtcttagtaccatattcgaaggtgtaaatctcgaacggttttctacagtgcagtagttagccgca------tagatggacttgttttatcctg 12823906  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||  |||| ||| |||||||||    
T  12823907 gaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcatgactcaacctaataacaactt 12824006  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    ||||||| ||||    ||||||| |||||||||||||| |||||  ||||  |||||||||||    
T  12824007 cggtagaaaata----gaatttggaaatccaaatacaacagtttagaaatcaaaaaacaacaa 12824065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 13059592 - 13059354
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||| ||||||||||| |||||||| | |||||| ||||||||| |||| ||||||||| ||||||||||| ||||||||||||||  |     
T  13059592 aagagtggtcttagaaccatatttgaaggtgtaatct-cgaacggttttctacaatgcagtagttaaccacacagttgtagctgagcttgttttattcta 13059494  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||| |||||||||||| || |||||||||||||  |||||||||||||||||||||||  |||||| |||||| ||  |||| ||||||| |||||    
T  13059493 gaggcggagtggttgatagtctgtcttgcacaattttatgcagtgccacgaaacgtcttaaagagagcgatctggtcatgactcaacctagtaataactt 13059394  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagttt 243  Q
    ||||||||||||    |||||||||||||||||||||| |||||    
T  13059393 cggtagataata----gaatttgaaaatccaaatacaacagttt 13059354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 277
Target Start/End: Original strand, 32082017 - 32082274
Alignment:
Q  15 taccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggtt 113  Q
    ||||||||  || ||||||| | ||||| | ||||||||| |||| |||||||||||||| |||||  ||||||||||||||| ||||||||||||||||    
T  32082017 taccatatccgaaggtgtaaatctcgaatggttttctacactgcagtagttaaccgcacaattgtaactgagcttgttttatcctggaggcggcgtggtt 32082116  T
Q  114 gatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataataga 213  Q
    ||||||| ||||||||||||||||| |||||||| |||| ||||||||  ||| || |||||||||  |||| ||||||||||||||||| |||||||      
T  32082117 gatagtt-gccttgcacaattttggacagtgccatgaaatgtcttaaaaagagtgatctggtcgtgactcaacctagtaacaacttcggttgataata-- 32082213  T
Q  214 atgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttc 277  Q
      ||||||| |||||||||||||| |||||| |||| |||||||||||| ||||||||||||||    
T  32082214 --gaatttggaaatccaaatacaacagtttggaaatccaaaaacaacaa-ttttaagacgtttc 32082274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 47244431 - 47244169
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||| ||    
T  47244431 aagagtggtcttagtaccatatttgggggtttaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagttgtgcttgttttatcctg 47244332  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |  |||  | |||||||  ||||||||||||||||||||||  | |||||||| |||||  |||| ||| |||||||||    
T  47244331 gaggcggcgtggttgatagtctttcttcaataattttgaacagtgccacgaaacgtcttaaagagggcgacctgatcgtgactcaacctactaacaactt 47244232  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagttt-gaa--aattcaaaaacaacaat 263  Q
    || |||||||||     |||||| |||||||||||||| ||||| |||  |||||||||||||||||    
T  47244231 cgatagataata----taatttggaaatccaaatacaacagtttagaaataattcaaaaacaacaat 47244169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 31729299 - 31729472
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| || ||  ||||||||||| ||    
T  31729299 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctggacttgttttatcctg 31729398  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctg 173  Q
    ||||||||||| ||||| || ||||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  31729399 gaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacctg 31729472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 19106791 - 19106488
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| || |           ||||||||  ||    
T  19106791 aagagtgatcttaataccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcaaaggt-----------tgttttattctg 19106703  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||| |||||||||||||  |||||||||||||||||||||||| | |||||||||||||   ||||| ||| | |||  |||| |||||||||||||    
T  19106702 gaggcgacgtggttgatagtcagccttgcacaattttgggcagtgctatgaaacgtcttaaagaaagcgatctgcttgtgactcaacctagtaacaactt 19106603  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||||||||||||  | ||||||||| |||||||||||| |||||| ||||||||||||||||||  |||||||||    
T  19106602 cggtagataata----gaatttggaaatccaaatacagcaatttgaaaatccaaaaacaacaa-ttttaatacgtttctttatgttatg--taccgaaga 19106510  T
Q  300 agttac-tattaaagttcagtt 320  Q
    | |||| |||||| ||||||||    
T  19106509 atttacttattaaggttcagtt 19106488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 33463269 - 33463483
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| |||| || |||||||||| || ||||||||| ||||||| ||||||||| |||| ||||||| || |||||||||| || |||||||||||| ||    
T  33463269 aagaatggttttggtaccatatt-gaaggtgtaattctcgaacggttttctacaatgcagtagttaatcgaacagttgtagttgtgcttgttttatcctg 33463367  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||||| |||||| | | |||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  33463368 gaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 33463467  T
Q  200 cggtagataatagaat 215  Q
    || |||||||||||||    
T  33463468 cgatagataatagaat 33463483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 33468886 - 33469137
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| ||||||| || |||  | ||| |||||||| ||||||| || ||| |||||| ||||||||||||||| ||    
T  33468886 aagaatggtcttggtaccatattggagg-tgtaattctcaaaccttattcaacagtgcagtagttaatcgaacaattgtagctgagcttgttttatcatg 33468984  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||| ||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||  || |||||| ||||||  |||| |||||||||||||    
T  33468985 gaggtggcgtggttgacagtctgccttgcacaactttgggcagtgccacaaaacgtcttaaagagaacgacctagtcgtgactcaacctagtaacaactt 33469084  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaa 256  Q
    | ||||||||||    |||||||||||||||||||||| |||||| |||| ||||||    
T  33469085 cagtagataata----gaatttgaaaatccaaatacaacagtttggaaatccaaaaa 33469137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 201
Target Start/End: Original strand, 42758683 - 42758868
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttga 115  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||||||||   ||  || |||||||  |||||||| |||||||||    
T  42758683 ccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaatcgcacagttgtttttggactagttttattctggaggcgacgtggttga 42758782  T
Q  116 tagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcg 201  Q
    |||| || |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||  |||| |||||||||||||||    
T  42758783 tagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 42758868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 71 - 237
Target Start/End: Complemental strand, 31765998 - 31765832
Alignment:
Q  71 acagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgac 170  Q
    |||||||||| ||  ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||| |||    
T  31765998 acagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgac 31765899  T
Q  171 ctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaa 237  Q
    ||||| |||  |||| ||||||||||||||||||||||||  |  ||||||| ||||||||| ||||    
T  31765898 ctggttgtgactcaacctagtaacaacttcggtagataattaatagaatttggaaatccaaaaacaa 31765832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 209
Target Start/End: Complemental strand, 2820024 - 2819818
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttggag 102  Q
    ||||||||||||  ||||||||||||||||| | ||||||||||||||| ||||||  ||||||  ||| |||||||| | | ||||||||||| ||||     
T  2820024 agtggtcttagtgtcatatttgagggtgtaaatctcgaacgattttctatagtgcaacagttaattgcatagttgtagctaaacttgttttatcctggac 2819925  T
Q  103 gcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcgg 202  Q
    ||||| |||| |||||| | |||||||||||||||| |||| ||||||||| |||||||   | |||||||||||||  ||||||||||||||||||||     
T  2819924 gcggcatggtagatagtctaccttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacctggtcgtgactcaatctagtaacaacttcga 2819825  T
Q  203 tagataa 209  Q
    |||||||    
T  2819824 tagataa 2819818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 28 - 245
Target Start/End: Complemental strand, 47574781 - 47574566
Alignment:
Q  28 ggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgcctt 126  Q
    ||||||||| ||||||  |||||||||  ||| ||||||||||||||||||||| ||  ||||||||||| |||| |||||||| |||||| |||| |||    
T  47574781 ggtgtaattctcgaacagttttctacatggcagtagttaaccgcacagttgtagctggacttgttttatcctggatgcggcgtgattgatattttgtctt 47574682  T
Q  127 gcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaa 226  Q
    ||||||||||||| |||| || |||||||||||||  |||||||||| | |||  |||| ||| |||||| ||||||||||||||||||   || |||||    
T  47574681 gcacaattttgggtagtgtcaagaaacgtcttaaagagagcgacctgattgtgactcaacctaataacaaattcggtagataatagaat---ttggaaaa 47574585  T
Q  227 tccaaatacaatagtttga 245  Q
    || |||||||| |||||||    
T  47574584 tcaaaatacaacagtttga 47574566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 51697072 - 51696931
Alignment:
Q  113 tgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatag 212  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||  |||| |||||||||| || | ||||||||||    
T  51697072 tgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaggagagcgacctggtcgtgactcaacctagtaacaa-tttgatagataatag 51696974  T
Q  213 aatgaatttgaaaatccaaatacaatagtttgaaaattcaaaa 255  Q
    ||||||||||||||||||||||||| |||||| |||| |||||    
T  51696973 aatgaatttgaaaatccaaatacaaaagtttggaaatccaaaa 51696931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 12878420 - 12878214
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||| |||||| |||| ||||||| ||||||| |||||||| ||||| || |||||  ||||||||||| ||| ||||||||||  ||    
T  12878420 aagagtggtcttagtatcatattggagg-tgtaattctcgaacggttttctac-gtgcagtaattaacaacacagttgtagctgaacttgttttattctg 12878323  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||| |||||| |||||||| ||| |||||||||||||   |||| ||||||||||||||||  |||||||||| |||||  |||| |||||||||||||    
T  12878322 gaggtggcgtgattgatagtctgctttgcacaattttgaaaagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaacctagtaacaactt 12878223  T
Q  200 cggtagata 208  Q
    | |||||||    
T  12878222 ccgtagata 12878214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 19906432 - 19906223
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| ||||||||||||||| ||||||| || ||| |||||| |   |||||||||| ||||||||||||||| ||    
T  19906432 aagaatggtcttggtaccatattggagg-tgtaattttcgaacggttttctaaagcgcagtagttatcaa-acagttgtagttgagcttgttttatcctg 19906335  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||  ||||||||| || ||||||||||||| | ||||| |||  |||||||||||  |||||||||| |||||  |||| ||| ||| |||||    
T  19906334 gaggcggcggagttgatagtctgtcttgcacaattttagacagtgtcactgaacgtcttaaaaagagcgacctgatcgtgactcaacctaataataactt 19906235  T
Q  200 cggtagataata 211  Q
    ||||||||||||    
T  19906234 cggtagataata 19906223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 48276562 - 48276749
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| ||||||| ||||| | |||||||||||||| ||||||| || |||||||||| ||| ||||||||||| ||    
T  48276562 aagaatggtcttggtaccatattggagg-tgtaattctcgaatggttttctacagtgcagtagttaatcgaacagttgtagctgaacttgttttatcctg 48276660  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaa 193  Q
    ||||||||||||||||||||     |||||||||||||  |||||| || ||||||||||||  |||||||||| |||||  |||| |||||||    
T  48276661 gaggcggcgtggttgatagt-----ttgcacaattttgaacagtgcaacaaaacgtcttaaagagagcgacctgatcgtgattcaacctagtaa 48276749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 4551180 - 4550973
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||||||||||||||||| ||||||| | |  |||| |||||||||||||| ||||||| |||| |||||||  |||| |||||||||| ||    
T  4551180 aagaatggtcttagtaccatatttgatggtgtaaatcttaaacggttttctacagtgcagtagttaatcgcagagttgtaattgagtttgttttatcctg 4551081  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||| ||||||||| || ||||||||| |||| |||||| ||  ||| |||||||| ||| ||||||  || ||  |||| |||||||||||||    
T  4551080 gaggcggcgtagttgatagtctgtcttgcacaactttgagcagtggcataaaatgtcttaaa-tgaacgacctaatcatgactcaacctagtaacaactt 4550982  T
Q  200 cggtagata 208  Q
    || ||||||    
T  4550981 cgatagata 4550973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 208
Target Start/End: Complemental strand, 12874682 - 12874514
Alignment:
Q  41 aacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttggg 139  Q
    |||| |||||||||||| | |||||||||||||| || ||| ||||||||||||||| ||||||||||||| ||||| || ||| |||||||||||| |     
T  12874682 aacggttttctacagtgtagtagttaaccgcacaattttagctgagcttgttttatcctggaggcggcgtgattgatggtctgctttgcacaattttaga 12874583  T
Q  140 cagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagata 208  Q
    ||||||||||||  ||||||||  |||||| ||| | |||  |||| ||| |||||||||| |||||||    
T  12874582 cagtgccacgaattgtcttaaagagagcgatctgattgtgactcaacctaataacaacttcagtagata 12874514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 19541073 - 19541269
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| ||||||||| |||| ||||||| || || ||||||| ||  ||||||||||| |     
T  19541073 aagagtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacaatgcagtagttaatcgaactgttgtagctggacttgttttatccta 19541172  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaa 196  Q
     ||||||||||||||||||| || |||| ||||||||   || ||||||||||  |||||||  || ||| ||| |||||  |||| ||||||||||    
T  19541173 taggcggcgtggttgatagtctgtcttgtacaattttaaacaatgccacgaaatatcttaaaaagaacgatctgatcgtgactcaacctagtaacaa 19541269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 154 - 306
Target Start/End: Original strand, 32221163 - 32221310
Alignment:
Q  154 gtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaa 253  Q
    ||||||||  ||||||||||||||||  |||| |||||||||| ||||||||||||||||||    |||||||||||||||||| | ||||||||| |||    
T  32221163 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaatttcggtagataatagaat----ttgaaaatccaaatacaacaatttgaaaatccaa 32221258  T
Q  254 aaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagttact 306  Q
    ||||||||| |||||||| | |||  | || |||||||||||||||| |||||    
T  32221259 aaacaacaa-ttttaagatggttcgatctgctatgtctaccgaagaaattact 32221310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 13065777 - 13065888
Alignment:
Q  97 ttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaa 196  Q
    |||||||| |||||||||||||| | |||| ||||| |||||||||||||| |||||||||||||  ||||||| | ||||||  |||| ||||||||||    
T  13065777 ttggaggctgcgtggttgatagtctccctttcacaactttgggcagtgccatgaaacgtcttaaagagagcgacatagtcgtgactcaacctagtaacaa 13065876  T
Q  197 cttcggtagata 208  Q
    ||||||||||||    
T  13065877 cttcggtagata 13065888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 16953186 - 16953106
Alignment:
Q  82 tgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaat 162  Q
    ||||||||||||||| ||||||||  |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  16953186 tgagcttgttttatcctggaggcgttgtggttgatagtctgccttgcacaattttgggtagtaccacgaaacgtcttaaat 16953106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 16948169 - 16948030
Alignment:
Q  16 accatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttg 114  Q
    |||||||| |||||||||||| | ||| ||||  |||||||| | ||||||| |||||||||||  |||| ||||||||||| |||||||||||| ||||    
T  16948169 accatattcgagggtgtaattctagaatgattagctacagtgtagtagttaatcgcacagttgtcaatgaacttgttttatcctggaggcggcgtagttg 16948070  T
Q  115 atagtttgccttgcacaattttgggcagtgccacgaaacgtctt 158  Q
    |||||    ||||||||||||| |||||| ||| ||| ||||||    
T  16948069 atagt----cttgcacaattttaggcagtaccatgaatcgtctt 16948030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 32545270 - 32545068
Alignment:
Q  8 gtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcgg 106  Q
    ||||||||| |||||| |||  ||||||| ||||||||||   ||||||||| ||||||  |||||| |||||| ||||||||||||||| ||||  |      
T  32545270 gtcttagtaacatattggagt-tgtaattctcgaacgattaattacagtgcagtagttagtcgcacaattgtagttgagcttgttttatcatggatacaa 32545172  T
Q  107 cgtggttgatagtttgccttg-cacaa-ttttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggta 204  Q
    ||||||||||||| || |||| ||||| |||| ||| |||||||||||| |||||||  ||  |||||| |||||  |||| |||||||||||||| |||    
T  32545171 cgtggttgatagtctgtcttgacacaatttttaggcggtgccacgaaacatcttaaa-agattgacctgatcgtgactcaacctagtaacaacttcagta 32545073  T
Q  205 gataa 209  Q
    |||||    
T  32545072 gataa 32545068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8649543 - 8649643
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||| ||||||||||||| || ||||||||| ||||||  |||||||||||| | ||||||||||||||||||||| |  |||||||||||| ||    
T  8649543 aagagtggtgttagtaccatatt-gaaggtgtaattctcgaacagttttctacagtgtagtagttaaccgcacagttgtagttaggcttgttttatcctg 8649641  T
Q  100 ga 101  Q
    ||    
T  8649642 ga 8649643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8661350 - 8661450
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||| ||||||||||||| || ||||||||| ||||||  |||||||||||| | ||||||||||||||||||||| |  |||||||||||| ||    
T  8661350 aagagtggtgttagtaccatatt-gaaggtgtaattctcgaacagttttctacagtgtagtagttaaccgcacagttgtagttaggcttgttttatcctg 8661448  T
Q  100 ga 101  Q
    ||    
T  8661449 ga 8661450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 653138 - 653048
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  653138 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaatt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 653048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 20513217 - 20513118
Alignment:
Q  71 acagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgac 170  Q
    |||||||||| |||| |||||||||| |||   || ||||||||||||| ||| ||||||||||||| ||||||||||||||| |||||||  |||||||    
T  20513217 acagttgtagctgag-ttgttttatcctgggaacgtcgtggttgatagtctgc-ttgcacaattttgagcagtgccacgaaacatcttaaagagagcgac 20513120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 1151294 - 1151411
Alignment:
Q  85 gcttgttttatcttggagg-cggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatc 183  Q
    |||||||||||  |||||| ||||||| ||||||||| | |||||||||||||||  |||| || |||||||||||||  ||| || ||| ||| |  ||    
T  1151294 gcttgttttatactggagggcggcgtgattgatagttagtcttgcacaattttggatagtgtcatgaaacgtcttaaagagagtgatctgatcgcgactc 1151393  T
Q  184 aatctagtaacaacttcg 201  Q
    || |||||||||||||||    
T  1151394 aacctagtaacaacttcg 1151411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 10120811 - 10120899
Alignment:
Q  90 ttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||| ||||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  |||||||||| |||||    
T  10120811 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtg 10120899  T

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Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 16595933 - 16596017
Alignment:
Q  87 ttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    |||||||||| ||| | || ||||||||| ||| ||| |||||||||||||| ||||||||| ||||||||||||  |||||||||    
T  16595933 ttgttttatcctggggacgtcgtggttgacagtctgc-ttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacct 16596017  T

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Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 6070662 - 6070563
Alignment:
Q  108 gtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagat 207  Q
    |||||| |||||||  |||||||||||||   || ||||| ||||| |||||||  |||||| |||||| ||  |||||||||||||||||| |||||||    
T  6070662 gtggttaatagtttctcttgcacaattttaaacaatgccaggaaacatcttaaagagagcgatctggtcatgactcaatctagtaacaactttggtagat 6070563  T

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Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 8083027 - 8083118
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||||||||||||||| ||||| |||| | |||||||| |  ||||  ||||||  |||||||||||||  |||||||||| |||||    
T  8083027 tgttttatcttggaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctgatcgtg 8083118  T

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Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 36354271 - 36354181
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  36354271 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 36354181  T

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Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 36359389 - 36359299
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  36359389 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 36359299  T

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Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 39999164 - 39999074
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  39999164 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 39999074  T

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Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 40004122 - 40004032
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  40004122 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 40004032  T

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Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 53797724 - 53797634
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| ||| || |||||| ||||||||||||||   |||||||||||||||    
T  53797724 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 53797634  T

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Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 54343298 - 54343208
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| || || ||||| ||||| |||| | ||||||||||||  ||| |||||| ||||||||||||||  ||||||||||||||||    
T  54343298 tgttttatcctgtagacggcgcggttgctagtctaccttgcacaattc-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 54343208  T

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Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 54348452 - 54348362
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  54348452 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 54348362  T

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Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 55810257 - 55810315
Alignment:
Q  198 ttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaac 260  Q
    ||||||||||||||||||    ||| |||||||||||||| ||||||||||| ||||||||||    
T  55810257 ttcggtagataatagaat----ttggaaatccaaatacaacagtttgaaaatccaaaaacaac 55810315  T

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Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 8980285 - 8980375
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  8980285 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 8980375  T

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Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 8985405 - 8985495
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  8985405 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 8985495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 13700605 - 13700515
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  13700605 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 13700515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 21299833 - 21299923
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  21299833 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 21299923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 41393340 - 41393250
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  41393340 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 41393250  T

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Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41816966 - 41816919
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt-tcgaacgatt 47  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  41816966 aagagtggtcttagtaccatattagagggtgttatttctcgaacgatt 41816919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 51019373 - 51019463
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  51019373 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 51019463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 54991581 - 54991491
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  54991581 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 54991491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 33722904 - 33722992
Alignment:
Q  71 acagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||||||||| || ||| |||||||| ||| | || |||||| ||| || ||| |||||||||||||| ||||| ||||||||||||||||    
T  33722904 acagttgtagctgggct-gttttatcctggggacgtcgtggtcgatggtctgc-ttgcacaattttggacagtgtcacgaaacgtcttaaa 33722992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13065728 - 13065761
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaa 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  13065728 aagagtggttttagtaccatatttgagggtgtaa 13065761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 15020466 - 15020538
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    ||||||||| |||  ||| ||||||||||||| ||  ||||||||||||||| |||| |||||||||| |||||    
T  15020466 tgttttatcctgggagcgtcgtggttgatagtctgt-ttgcacaattttgggaagtgtcacgaaacgttttaaa 15020538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 13065917 - 13065957
Alignment:
Q  216 gaatttgaaaatccaaatacaatagtttgaaaattcaaaaa 256  Q
    ||||||| ||||| |||||||| ||||||||||||||||||    
T  13065917 gaatttggaaatcaaaatacaacagtttgaaaattcaaaaa 13065957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 25478210 - 25478503
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    ||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||  ||||||||||||| || |||||||||||  |||    
T  25478210 aagagtggtcttagtactatatttgagggtgtaattcttgaacggttttctacagtgcatagttattcgcacagttgtagctgggcttgttttattctgg 25478309  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||  |||||||||||| |||  |||| ||||||||||||||    
T  25478310 aggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctggttgtgactcaacctagtaacaacttc 25478409  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccg 295  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  25478410 ggtagataatagaatgaatttggaaatccaaatacaatagtttgaaaatccaaaaacaacaa-ttttaagacgtttctttatgttatgtctaccg 25478503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 9180636 - 9180937
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |  |||||||||| || |||||||||||| ||    
T  9180636 aagagtggtcttagtaccatatttgagggtgtaattctcgaacgattttctacagtgcagtagttaatcaaacagttgtagctgggcttgttttatcctg 9180735  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  9180736 gaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 9180835  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||| | || |||||||||||||||    
T  9180836 cggtagataata----gaatttgaaaatccaaatacaacagtttggaaattcaaaaacaacaa-ttttaagacgtttctatctgctatgtctaccgaaga 9180930  T
Q  300 agttact 306  Q
    |||||||    
T  9180931 agttact 9180937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 10160638 - 10160935
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| |||    
T  10160638 aagaatggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcatagttaaccgcacagttgcagctgagcttgttttatcctgg 10160736  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| ||||||||||||||    
T  10160737 aggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 10160836  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaa 300  Q
    |||||||||||    ||||||  |||||||||||||| |||||| |||| |||||||||||| ||||||||||||  | | || ||||||||||||||||    
T  10160837 ggtagataata----gaatttagaaatccaaatacaagagtttggaaatccaaaaacaacaa-ttttaagacgttcttatctgctatgtctaccgaagaa 10160931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 1934905 - 1935162
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| || || |||||||||||| ||    
T  1934905 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcattagttaaccgcacagttgcagctgggcttgttttatcctg 1935004  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  1935005 gaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 1935104  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    ||||||| |||||||||||||| |||||||||||||||||||||||    
T  1935105 cggtagataata----gaatttggaaatccaaatacaacagtttgaaaattcaaaaacaaca 1935162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 30651112 - 30650813
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||| || |||||||||||||||    
T  30651112 aagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacggtgcagtagttaatcgaacagttgtagctgggcttgttttatcttg 30651013  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||  |||| |||||||||||||    
T  30651012 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaactt 30650913  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||| |||||||||||| ||||||||||||||  | || || ||||||||||||    
T  30650912 cggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaacaa-ttttaagacgtttcgatctgctacgtctaccgaaga 30650818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 25497238 - 25497498
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| |||    
T  25497238 aagagtggtcttagtatcatatttgagggtgtaattctcgaacggttttctacagtgcatagttaaccgcacagttgtagctgggcttgttttatcctgg 25497337  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| || ||||||||| |||||||||||  |||||||||||||||  ||||||||||||||||  |||| |||||||||| |||    
T  25497338 aggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaatttc 25497437  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||| |||| |||||||||||    
T  25497438 ggtagataatagaatgagtttggaaatctaaatacaatagtttggaaatccaaaaacaaca 25497498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 8 - 306
Target Start/End: Complemental strand, 30658438 - 30658145
Alignment:
Q  8 gtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcgg 106  Q
    |||||||||||||||| || ||||||||| ||||||| |||||||||||||| |||||||||||||||||| || || |||||||||||| |||||||||    
T  30658438 gtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcgg 30658340  T
Q  107 cgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtaga 206  Q
    ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||  ||||||||||||||||  ||||  |||||||||||||||||||    
T  30658339 cgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacatagtaacaacttcggtaga 30658240  T
Q  207 taatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagttact 306  Q
    ||||||||     ||| |||| ||||||||| |||||| |||| |||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  30658239 taatagaac----ttggaaatgcaaatacaacagtttggaaatccaaaaacaacaatttt-aagacgtttttttatgttatgtctatcgaagaagttact 30658145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 9189715 - 9189972
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |  |||||||||| || |||||||||||| ||    
T  9189715 aagagtggtcttagtaccatatttgagggtgtaattctcgaacgattttctacagtgcagtagttaatcaaacagttgtagctgggcttgttttatcctg 9189814  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||| |||||||||||  |||| |||||||||||||    
T  9189815 gaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtcgtgactcaacctagtaacaactt 9189914  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||| |||||||||||    
T  9189915 cggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 9189972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 4 - 261
Target Start/End: Complemental strand, 18344611 - 18344357
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggag 102  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||| || |||||||||| || |||||||||||| |||||    
T  18344611 agtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggag 18344512  T
Q  103 gcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcgg 202  Q
     |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||||||||    
T  18344511 ccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaatctagtaacaacttcgg 18344412  T
Q  203 tagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    | |||||||    |||||||||||||||||||||| |||||| |||| |||||||||||    
T  18344411 ttgataata----gaatttgaaaatccaaatacaacagtttggaaatccaaaaacaaca 18344357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 19892378 - 19892635
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||| || |||||||||| ||||||||||||||| ||    
T  19892378 aagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatcctg 19892477  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||  |||||||||||||| |||||||| |||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  19892478 gaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 19892577  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||| |||||||||||    
T  19892578 cggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 19892635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 35602105 - 35601848
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||   |||||||| ||||||| |||||||||||||| ||||||| || ||| |||||| || | |||||||||| ||    
T  35602105 aagagtggtcttagtaccatatttggatgtgtaattctcgaacggttttctacagtgcagtagttaatcgaacaattgtagctgggtttgttttatcctg 35602006  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||| | || ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  35602005 gaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacctggtcgtgattcaacctagtaacaactt 35601906  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  35601905 cggtagataata----gaatttgaaaatccaaatacaatagtttggaaatccaaaaacaaca 35601848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 29677950 - 29677694
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| || |||| ||||||| ||    
T  29677950 aagagtggtcttagtaccatatttgtgggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctgggctttttttatcctg 29677851  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
     ||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||||||   ||||||||||||||||  |||| |||||||||||||    
T  29677850 taggcggcttggttgatagtttgccttgcacaatttttggcagtgccactaaatgtcttaatgagagcgacctggtcgtgactcaacctagtaacaactt 29677751  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    || |||||||||    ||||||| |||||||||||||| |||||| |||| |||||||||||    
T  29677750 cgctagataata----gaatttggaaatccaaatacaacagtttg-aaatccaaaaacaaca 29677694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 4 - 261
Target Start/End: Complemental strand, 31326918 - 31326665
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggag 102  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||| ||||||||||||| || |||||||||||| |||||    
T  31326918 agtggtcttagtaccatatttgagggtgtaattctcgaacggttttcta-agtgcagtagttaatcgcacagttgtagttgggcttgttttatcctggag 31326820  T
Q  103 gcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcgg 202  Q
    | ||||||||||||||| |||||||||||||||||||||||| || |||||||||||||  ||||||||||||||||  |||| ||||||||||||||||    
T  31326819 gtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgg 31326720  T
Q  203 tagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||||||||    ||||||| |||| ||| ||||| | |||| |||| |||||||||||    
T  31326719 tagataata----gaatttggaaattcaattacaacattttggaaatccaaaaacaaca 31326665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 247
Target Start/End: Complemental strand, 29677554 - 29677321
Alignment:
Q  11 ttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgt 109  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||  ||| ||||||| ||||||||||||    
T  29677554 ttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctggacttattttatcctggaggcggcgt 29677455  T
Q  110 ggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataa 209  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||  ||||||| || |||||  |||| ||||||||||||||| |||||||    
T  29677454 ggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatgatcgtgactcaacctagtaacaacttcgctagataa 29677355  T
Q  210 tagaatgaatttgaaaatccaaatacaatagtttgaaa 247  Q
    ||    |||||||||||| ||||||||| |||||||||    
T  29677354 ta----gaatttgaaaattcaaatacaacagtttgaaa 29677321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 12797108 - 12796851
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||||||  |  ||||||||||| ||    
T  12797108 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacggtgcagtagttaaccgcacagttgtagccggacttgttttatcctg 12797009  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||| |||||||||||||||| || |||| |||||||||||||||||||| ||||||||||||  |||||| |||||||||  |||| ||| |||||||||    
T  12797008 gagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacgtcttaaagagagcgatctggtcgtgactcaacctaataacaactt 12796909  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||| ||||||||    |||||||||||| ||||||||| ||| || |||| |||||||||||    
T  12796908 cggcagataata----gaatttgaaaattcaaatacaacagtgtggaaatccaaaaacaaca 12796851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 49 - 261
Target Start/End: Original strand, 35638957 - 35639166
Alignment:
Q  49 tctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgcca 147  Q
    ||||||||||| ||||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||   || ||||||||||||||||||||||||    
T  35638957 tctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatacgctgtcttgcacaattttgggcagtgcca 35639056  T
Q  148 cgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaa 247  Q
    ||||||||||||||  |||||||||| |||||  ||||  ||||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||    
T  35639057 cgaaacgtcttaaaaagagcgacctgatcgtgattcaacttagtaacaacttcggtagataata----gaatttgaaaatccaaatacaatagtttggaa 35639152  T
Q  248 attcaaaaacaaca 261  Q
    || |||||||||||    
T  35639153 atccaaaaacaaca 35639166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 46 - 262
Target Start/End: Original strand, 42926716 - 42926930
Alignment:
Q  46 ttttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtg 144  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  42926716 ttttctacggtgcagtagttaaccgcacagttgtagttgagcttgtattatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcagtg 42926815  T
Q  145 ccacgaaac--gtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtt 242  Q
    |||||||||  ||||||||  ||||| |||| |||||  |||| |||||||||||||||||||||||||    ||||||| ||||||||||| || ||||    
T  42926816 ccacgaaacgtgtcttaaagagagcggcctgatcgtgactcaacctagtaacaacttcggtagataata----gaatttggaaatccaaata-aacagtt 42926910  T
Q  243 tgaaaattcaaaaacaacaa 262  Q
    ||||||| ||||||||||||    
T  42926911 tgaaaatccaaaaacaacaa 42926930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 28 - 237
Target Start/End: Original strand, 7737790 - 7737996
Alignment:
Q  28 ggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgcctt 126  Q
    ||||||||| ||||||| |||||||||||||| ||||||| || ||| |||||| || |||||||||||| |||||||||||||||||||||| || |||    
T  7737790 ggtgtaattctcgaacggttttctacagtgcaatagttaatcgaacaattgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgtctt 7737889  T
Q  127 gcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaa 226  Q
    |||||||||||||||||||||| |||| |||||||  ||||||| ||||||||  |||| ||||||||||||||||| |||||||    |||||||||||    
T  7737890 gcacaattttgggcagtgccacaaaacttcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtggataata----gaatttgaaaa 7737985  T
Q  227 tccaaatacaa 237  Q
    |||||||||||    
T  7737986 tccaaatacaa 7737996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 21523637 - 21523839
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||    |||||||||||||||||||| ||| ||||||||| | | |    
T  21523637 aagagtggtcttagtaccatatttgagggtgtaaatctcgaacgattttctacagt----agttaaccgcacagttgtagctgaacttgttttaacctag 21523732  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    | ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||   ||| |||||||||||  |||| ||| |||||||| |    
T  21523733 aagcggcgtggttgatagtctcccttgcacaattttgggcagtgccacgaaacgt-ttaaagatagcaacctggtcgtgactcaacctattaacaactcc 21523831  T
Q  201 ggtagata 208  Q
     |||||||    
T  21523832 agtagata 21523839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 255
Target Start/End: Complemental strand, 28603483 - 28603230
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgtttt-atcttgga 101  Q
    ||||||||||||||||||||||  ||||||||| | ||||| |||| ||||||||| ||||||| || |||||||||| ||| |||||||| ||| ||||    
T  28603483 agtggtcttagtaccatatttggaggtgtaattcttgaacggttttttacagtgcagtagttaatcgaacagttgtagctgaacttgtttttatcctgga 28603384  T
Q  102 ggcgg----cgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaac 197  Q
    ||  |    ||||||||||||| || ||||||||||||||| ||||| |||||||||| |||||  ||||||||||||||||  |||| |||||||||||    
T  28603383 ggtaggtagcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgttttaaagagagcgacctggtcgtgactcaacctagtaacaac 28603284  T
Q  198 ttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaa 255  Q
    ||||||||||||||    ||||||| |||||||||||||| |||||| |||| |||||    
T  28603283 ttcggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaa 28603230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 19094422 - 19094614
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgtttt-atcttggaggcggcgtggttg 114  Q
    |||||||||||||||||||| ||||||| |||||||||||||| || |||| ||||||||||||| |||||||||||| ||| ||||||||| |||||||    
T  19094422 ccatatttgagggtgtaattctcgaacggttttctacagtgcagtaattaatcgcacagttgtagctgagcttgtttttatcctggaggcggtgtggttg 19094521  T
Q  115 atagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagat 207  Q
    ||| ||||||||||||||||||||||||| |||  |||||| ||||   |||||||||| |||||  |||| ||| |||||||||||||||||    
T  19094522 atattttgccttgcacaattttgggcagtaccaaaaaacgttttaaggagagcgacctgatcgtgactcaacctaataacaacttcggtagat 19094614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 30631765 - 30631505
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt-tcgaacgattttctacagtgca-tagttaaccgcaca---gttgtagatgagcttgttttat 95  Q
    |||||| |||||||||||||||| || ||||||| || ||||||| |||||||||||||| ||| ||||||||||   |||| || || |||||||||||    
T  30631765 aagagttgtcttagtaccatatt-gaaggtgtaaattctcgaacggttttctacagtgcagtagataaccgcacaacagttgcagttgggcttgttttat 30631667  T
Q  96 cttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaaca 195  Q
    | |||||| ||||||||||||||| |  ||||||||||||| |||| |||||||||| || |||||  ||| |||||  |||||  |||| |||||||||    
T  30631666 cctggaggtggcgtggttgatagtctttcttgcacaatttttggcaatgccacgaaaagttttaaagagagtgacctaatcgtgactcaacctagtaaca 30631567  T
Q  196 acttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||||||||||||||||||     ||| |||||||||||||| |||||| |||| |||||||||||    
T  30631566 acttcggtagataatagaac----ttggaaatccaaatacaacagtttggaaatccaaaaacaaca 30631505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 40847511 - 40847712
Alignment:
Q  1 aagagtggtcttagta-ccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||| ||| ||||||||||| |||||| | ||||||| ||||||| |||    |||||||| ||||||||||| ||  |||||||||||  |    
T  40847511 aagagtggtcttggtaaccatatttgagagtgtaaatctcgaacggttttctatagt----agttaaccacacagttgtagttggacttgttttatccag 40847606  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||| |||||||||||||||||||||||||||| ||||  ||||||||| ||||||||||||  || |||| ||||||||  ||||||||||||||||||    
T  40847607 gaggtggcgtggttgatagtttgccttgcacaactttgaacagtgccacaaaacgtcttaaagagaacgacatggtcgtgactcaatctagtaacaactt 40847706  T
Q  200 cggtag 205  Q
    ||||||    
T  40847707 cggtag 40847712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 19578327 - 19578595
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| | ||| ||||||||| || ||||||| | |||||||||||||||||||||| ||||||||||| || |||||| ||  ||||||||| | ||    
T  19578327 aagagtgattttaataccatatt-gaaggtgtaaatctcgaacgattttctacagtgcaatagttaaccgcccaattgtagttggacttgttttaccctg 19578425  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||| || ||||||||||| | |||||||||||||| || |||||||| ||||||||||||  |||||| |||||||||  |||| ||| |||||||||    
T  19578426 gaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctggtcgtgactcaacctaataacaactt 19578525  T
Q  200 cggtagataat-------agaat-gaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||| |       | | | ||||||||||||||||||||||||||||| |||| ||||| |||||    
T  19578526 cggtagatattctctttcaaagtagaatttgaaaatccaaatacaatagtttggaaatccaaaaccaaca 19578595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 17545210 - 17545419
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||| ||||||||||||||||| | ||||| ||||||||||| ||| | |||||||||||| |||||||||| |||||||||||| |     
T  17545210 aagagtggtcttagtatcatatttgagggtgtaaatctcgaatgattttctacaatgcgttagttaaccgcactgttgtagatgtgcttgttttatcctc 17545309  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaa-attgagcgacctggtcgtgtatcaatctagtaacaact 198  Q
    |||| ||||||||||||||| |   |||||||| ||||   |||| ||||||||||||||| |   | ||||||| ||||   |||| ||||||||||||    
T  17545310 gaggtggcgtggttgatagtcttttttgcacaactttgaaaagtgtcacgaaacgtcttaagaaaaaacgacctgatcgtaactcaacctagtaacaact 17545409  T
Q  199 tcggtagata 208  Q
    ||||||||||    
T  17545410 tcggtagata 17545419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 160136 - 160031
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatc 187  Q
    |||||||||| ||||||| || |||||||||  | ||||||||||||||||| |||| |  ||||||| |||||  ||||||||||||||||| |||| |    
T  160136 tgttttatctcggaggcgacgcggttgatagcctaccttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctcaacc 160037  T
Q  188 tagtaa 193  Q
    ||||||    
T  160036 tagtaa 160031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 20711516 - 20711420
Alignment:
Q  112 ttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagata 208  Q
    |||||||| || |||||||||||||| ||||||| ||||||| |||||||  ||| ||  ||||||||  |||| ||||||||||||||||||||||    
T  20711516 ttgatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggtcgtgactcaacctagtaacaacttcggtagata 20711420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 14104685 - 14104602
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    ||||||||| ||| | || ||||||||||||||||  ||||||||||||| |||||| ||||||||||||||||  |||||||||    
T  14104685 tgttttatcatggggacgtcgtggttgatagtttgt-ttgcacaattttgagcagtgacacgaaacgtcttaaagagagcgacct 14104602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 17453497 - 17453564
Alignment:
Q  6 tggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcaca 73  Q
    |||||||||||||||||| || ||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  17453497 tggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcaca 17453564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 13291455 - 13291584
Alignment:
Q  3 gagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttgga 101  Q
    ||||||| ||||||| ||||| |||| | ||||| ||||||| |||||||| | ||| ||||||| |||| |||||||| ||| ||| || |||| | |     
T  13291455 gagtggttttagtacgatattggaggtt-taattatcgaacggttttctactgagcaatagttaatcgcatagttgtagctgaacttattctatcatagt 13291553  T
Q  102 ggcggcgtggttgatagtttgccttgcacaa 132  Q
    ||||||||||||||||||||  |||||||||    
T  13291554 ggcggcgtggttgatagtttatcttgcacaa 13291584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 5089373 - 5089286
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtc 176  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||||||  ||||  |||||| ||||||||||||||  |||||||||||||    
T  5089373 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaagagagcgacctggtc 5089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 42723451 - 42723541
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  42723451 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 42723541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 42728620 - 42728710
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  42728620 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 42728710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 42914737 - 42914647
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||||||  || || |||||| ||||||||||||||  || |||||||||||||    
T  42914737 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtg 42914647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 44096397 - 44096307
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  44096397 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 44096307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 44754596 - 44754686
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  44754596 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 44754686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 44759762 - 44759852
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  44759762 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 44759852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 15489796 - 15489883
Alignment:
Q  170 cctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||  |||| |||||||||||||||||||||||||    |||||||||||| | ||||||| |  ||| |||| |||||||||||    
T  15489796 cctggtcgtgactcaacctagtaacaacttcggtagataata----gaatttgaaaattctaatacaacatattggaaatccaaaaacaaca 15489883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 44957437 - 44957509
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    ||||||||| |||||  | ||||||||||||| ||| ||||||||||||  |||||||||| ||||||||||||    
T  44957437 tgttttatcctggagatgtcgtggttgatagtctgc-ttgcacaattttttgcagtgccacaaaacgtcttaaa 44957509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 32079546 - 32079443
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgc-atagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttga 115  Q
    |||||||| ||||||||||| ||||||||||  ||| | ||| |||||||| ||||||||||||| ||| | | ||||||| ||||| |  |||| ||||    
T  32079546 ccatatttaagggtgtaattctcgaacgattagctataatgcaatagttaatcgcacagttgtagctgaaccttttttatcctggagacaacgtgattga 32079447  T
Q  116 tagt 119  Q
    ||||    
T  32079446 tagt 32079443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 40518472 - 40518562
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||| |||| ||  |||||| ||||||||||||||   |||||||||||||||    
T  40518472 tgttttatcctggagacggcgcggttgctagtctaccttgcactatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 40518562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 40392414 - 40392342
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||||||  || || |||||| ||||||||||||||    
T  40392414 tgttttatcctggagacggcgtggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa 40392342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 40847735 - 40847780
Alignment:
Q  217 aatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    |||||| |||||||||||||| |||||||||||  |||||||||||    
T  40847735 aatttggaaatccaaatacaacagtttgaaaatctaaaaacaacaa 40847780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 320
Target Start/End: Original strand, 7571134 - 7571446
Alignment:
Q  5 gtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggagg 103  Q
    |||||||||||||||||||||  ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||    
T  7571134 gtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctgagcttgttttatcctggagg 7571233  T
Q  104 cggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggt 203  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||||||    
T  7571234 cggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 7571333  T
Q  204 agataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagtt 303  Q
    ||||||||    ||||||| |||||||||||||| |||||| |||| |||||||||||| ||||||||||||||  | || |||||||||||||||||||    
T  7571334 agataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaacaa-ttttaagacgtttcgatctgctatgtctaccgaagaagtt 7571428  T
Q  304 ac-tattaaagttcagtt 320  Q
    || |||||| ||||||||    
T  7571429 acttattaaggttcagtt 7571446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 23666035 - 23666294
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| || || |||||||||||| ||    
T  23666035 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcattagttaaccgcacagttgcagctgggcttgttttatcctg 23666134  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  23666135 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 23666234  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaat 263  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  23666235 cggtagataata----gaatttggaaatccaaatacaacagtttggaaattcaaaaacaacaat 23666294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 24038283 - 24038542
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| || || |||||||||||| ||    
T  24038283 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcattagttaaccgcacagttgcagctgggcttgttttatcctg 24038382  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  24038383 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 24038482  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaat 263  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  24038483 cggtagataata----gaatttggaaatccaaatacaacagtttggaaattcaaaaacaacaat 24038542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 18472188 - 18471888
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||| ||||||| || |||||||||| || |||||||||||| ||    
T  18472188 aagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacaatgcagtagttaatcgaacagttgtagctgggcttgttttatcctg 18472089  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||| ||| || ||||  ||||||||||||||||  |||| |||||||||||||    
T  18472088 gaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacg-aacatcgtaaagagagcgacctggtcgtgactcaacctagtaacaactt 18471990  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||||||||||||  |||||  ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  18471989 cggtagataata----gaatttggaaatccaaatacatcagtttagaaattcaaaaacaacaa-ttttaagacgtttctatatgttatatctaccgaaga 18471895  T
Q  300 agttact 306  Q
    |||||||    
T  18471894 agttact 18471888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 39775640 - 39775897
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| || |||||||||| ||||||||||||||| ||    
T  39775640 aagagttgtcttagtaccatatttggaggtgtaattttcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatcctg 39775739  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||| ||||||    
T  39775740 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtagcaactt 39775839  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||| |||||||||||    
T  39775840 cggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 39775897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 3692798 - 3692498
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||||| ||||||| || |||||||||| || |||||||||||| ||    
T  3692798 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctg 3692700  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  3692699 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 3692600  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||| |||||||||||| ||||||||||||||  | || |  ||||||||||||    
T  3692599 cggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaacaa-ttttaagacgtttcgatctgctgcgtctaccgaaga 3692505  T
Q  300 agttact 306  Q
    |||||||    
T  3692504 agttact 3692498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 758280 - 758532
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| || || |||||||||||| ||    
T  758280 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgggcttgttttatcctg 758379  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||||  |||| |||||||||||||    
T  758380 gaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaactt 758479  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaa 256  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||| ||||||    
T  758480 cggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaa 758532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 29350421 - 29350154
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |||||| ||||||||||| ||||||||||||||| ||    
T  29350421 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtaattaaccacacagttgtagttgagcttgttttatcctg 29350322  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||| |||| ||| || |||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||  |||| |||||||||||||    
T  29350321 gaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgtgactcaacctagtaacaactt 29350222  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaaga 271  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||| ||||||||||| ||| |||||    
T  29350221 cggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaacagtttataaga 29350154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 14438607 - 14438864
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| || || |||||||||||| ||    
T  14438607 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgggcttgttttatcctg 14438706  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||  |||| |||||||||||||    
T  14438707 gaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggtcgtgactcaacctagtaacaactt 14438806  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||||||||||||||     ||| |||||||||||||| ||||||  ||| |||||||||||    
T  14438807 cggtagataatagaac----ttggaaatccaaatacaacagtttgggaatccaaaaacaaca 14438864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 18467406 - 18467149
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||   |||||||| |||||||||||||||||||||| ||||||| || ||| |||||| ||  ||||||||||| ||    
T  18467406 aagagtggtcttagtaccatatttggaagtgtaattctcgaacgattttctacagtgcagtagttaatcgaacaattgtagttggacttgttttatcctg 18467307  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  18467306 gaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 18467207  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    |||||||||||||||||||||  |||||| ||||||||||||||||    
T  18467206 cggtagataata----gaatttgaaaatccaaatacatcagtttggaaattcaaaaacaaca 18467149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 3672766 - 3672509
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||||| ||||||| || |||||||||| || |||||||||||| ||    
T  3672766 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctg 3672668  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  3672667 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 3672568  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||| ||||||||||||    
T  3672567 cggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaacaa 3672509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 20520235 - 20519975
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||| |||||||| ||||||| | ||||||  ||||||||||| || ||||||||||||||||||||| ||  ||||||||||||||    
T  20520235 aagagtggtcttagtactatatttgaaggtgtaaatctcgaacagttttctacagtacagtagttaaccgcacagttgtagctggacttgttttatcttg 20520136  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||  |||| |||||||||||||    
T  20520135 gaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggtcgtgactcaacctagtaacaactt 20520036  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatt 264  Q
    || |||||||||    ||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  20520035 cgctagataata----gaatttggaaatccaaatacaacagtttgaaaattcgaaaacaacaatt 20519975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 23661376 - 23661664
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| || || |||||||||||| ||    
T  23661376 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcattagttaaccgcacagttgcagctgggcttgttttatcctg 23661475  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||              |||||||||||||||  |||| |||||||||||||    
T  23661476 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacga--------------agcgacctggtcgtgactcaacctagtaacaactt 23661561  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttcttta-tgttatgtctaccgaag 298  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| ||||||||||||||||| |||||| ||||||   || || ||||||||||||||    
T  23661562 cggtagataata----gaatttggaaatccaaatacaacagtttggaaattcaaaaacaacaa-ttttaaaacgttttggtactgctatgtctaccgaag 23661656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 3419176 - 3418917
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||| | || |||| ||||||||  |||| |||||||||||||||||| || ||||||||||||||| ||    
T  3419176 aagagtggtcttagtaccatatttgagggtgtaaatctcaaacggttttctacgatgcaatagttaaccgcacagttgcagttgagcttgttttatcctg 3419077  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
     ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||  |||| |||||||||||||    
T  3419076 aaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacttggtcgtgactcaacctagtaacaactt 3418977  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaat-tcaaaaacaacaa 262  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| ||||  ||||||||||||    
T  3418976 cggtagataata----gaatttggaaatccaaatacaacagtttggaaataccaaaaacaacaa 3418917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 6 - 262
Target Start/End: Complemental strand, 8883345 - 8883093
Alignment:
Q  6 tggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggc 104  Q
    ||||||| |||||||||| || ||||||||| ||||||| |||||||||||||| |||||||||||||||||| || || |||||||||||| |||||||    
T  8883345 tggtctttgtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggc 8883247  T
Q  105 ggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggta 204  Q
     |||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  || | ||||||||||||||||||    
T  8883246 agcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcgacctagtaacaacttcggta 8883147  T
Q  205 gataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    |||||||    |||||||||||||||||||||| |||||| |||| ||||| ||||||    
T  8883146 gataata----gaatttgaaaatccaaatacaacagtttggaaatccaaaatcaacaa 8883093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 8888110 - 8887810
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||| | |||||||||||||||||| || ||   |||||||||| ||    
T  8888110 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgtagtagttaaccgcacagttgcagctggatttgttttatcctg 8888012  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||| | || ||||||||||||||| |||||| || ||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  8888011 gaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 8887912  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||| ||||||||| |||||| |||| ||||| |||||| ||||||||||||||  | || |||||||| ||||||    
T  8887911 cggtagataata----gaatttggaaattcaaatacaacagtttggaaatccaaaatcaacaa-ttttaagacgtttcgatctgctatgtctatcgaaga 8887817  T
Q  300 agttact 306  Q
    |||||||    
T  8887816 agttact 8887810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 3033816 - 3033573
Alignment:
Q  9 tcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggc 107  Q
    ||||||||||||||| || ||||||||| ||||||| |||||||||||||| ||||||| || |||||||||| ||||||||||||||| | |||||||     
T  3033816 tcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatccttgaggcggt 3033718  T
Q  108 gtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagat 207  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||  |||| |||||||||||||||||||||    
T  3033717 gtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 3033618  T
Q  208 aatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaa 256  Q
    ||||    ||||||| |||||||||||| | |||||| |||| ||||||    
T  3033617 aata----gaatttggaaatccaaatactacagtttggaaatccaaaaa 3033573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 49971336 - 49971591
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| | |||||||| ||||||||| || ||  ||||||||||| ||    
T  49971336 aagagtggtctcagtaccatatttgagggtgtaattctcgaacggttttctacagtgaagtagttaactgcacagttgcagctggacttgttttatcctg 49971435  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||  || |||||||||||||  |||| |||||||||||||    
T  49971436 gaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtcgtgactcaacctagtaacaactt 49971535  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaa 259  Q
    ||||||||||||     || ||| |||||||||||||| |||||| |||| |||||||||    
T  49971536 cggtagataata----aaacttggaaatccaaatacaacagtttggaaatccaaaaacaa 49971591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 8069859 - 8069603
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| || ||||||||||| |||||||||||||||||| || || |||||||||||| ||    
T  8069859 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttatctacagtgcagtagttaaccgcacagttgcagctgggcttgttttatcctg 8069761  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || |||||||||||| || ||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  8069760 gaggcggcgtggttgatagtctgtcttgcacaattt-ggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 8069662  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||   |  ||||||| ||||||||||||||  ||||| |||| |||||||||||    
T  8069661 cggtagataa---atagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 8069603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 32474591 - 32474805
Alignment:
Q  1 aagagtggtctt-agtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatctt 98  Q
    |||||||||||| ||||||||||||   ||| ||||| |||||||||||||||||||||| ||||||| || |||||||||| || |||||||||||| |    
T  32474591 aagagtggtctttagtaccatatttagaggtataattctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcct 32474690  T
Q  99 ggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaact 198  Q
    |||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||  |||||||||||||||||    
T  32474691 ggagacggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaga--gagcgacctggtcgtggctcaatctagtaacaact 32474788  T
Q  199 tcggtagataatagaat 215  Q
    |||||||||||||||||    
T  32474789 tcggtagataatagaat 32474805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 55431496 - 55431242
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||||||||||| |||| ||||||  |||||||||||||| ||||||||||||||||||||| ||  ||||||||||| ||    
T  55431496 aagagtggtcttagtaccatatttgagggtgcaattctcgaacagttttctacagtgcagtagttaaccgcacagttgtagctggacttgttttatcctg 55431397  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||| |||||| | ||||| ||||||||||||||||  |||||||||| |||||  |||| ||| |||||||||    
T  55431396 gaggcggcgtggttgatagtctgccttgcataatttttgacagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaacctaataacaactt 55431297  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaaca 258  Q
    | | ||||||||    ||||||| ||||||||||||||  ||||| |||| ||||||||    
T  55431296 cagcagataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaaca 55431242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 12965786 - 12966085
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| ||||||| | ||||  ||||||||||||||| |||||| || ||| |||||| ||  ||||||||||| ||    
T  12965786 aagaatggtcttggtaccatattggagg-tgtaattcttgaacagttttctacagtgcattagttaatcgaacaattgtagttggacttgttttatcctg 12965884  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||  ||||||||||||  |||||||||||| |||  ||||||||||||||||||    
T  12965885 gaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgacctggttgtgactcaatctagtaacaactt 12965984  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    |||||||| |||    ||||||| ||| ||||||||||  |||||||||||||||||||| || ||||||||||||||    || |||||||||||||||    
T  12965985 cggtagatcata----gaatttggaaacccaaatacaacggtttgaaaattcaaaaacaataa-ttttaagacgtttc-gactgctatgtctaccgaaga 12966078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 3657152 - 3657409
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| |  |||||||||| ||  ||||||||||||||    
T  3657152 aagagtggtcttagtaccatatttaagggtgtaattctcgaacgattttctacagtgcagtagttaatctaacagttgtagctggacttgttttatcttg 3657251  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||| ||| ||||||||||| || ||||||||||||||  ||||||||||||||||||||||  |||||| ||  |||||  ||||  ||||||||||||    
T  3657252 gaggtggcatggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctaatcgtgactcaacatagtaacaactt 3657351  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||||||    ||  |||| ||||||||| ||||||||||| |||| ||||||    
T  3657352 cggtagataatagaat----ttagaaattcaaatacaacagtttgaaaatccaaacacaaca 3657409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 27709117 - 27708954
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| || || |||||||||||| ||    
T  27709117 aagagtgatcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgaagctgggcttgttttatcctg 27709018  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaatt 163  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||| |||||||||| ||||    
T  27709017 gaggcggcgtggttgatagtctaccttgcataattttgggcagtgccatgaaacgtctttaatt 27708954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 28 - 306
Target Start/End: Original strand, 12112580 - 12112866
Alignment:
Q  28 ggtgtaattttcgaacgattttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgcctt 126  Q
    ||||||| | ||||| | |||||||||||| |  |||||||| | || |||||| ||||||||||||||| ||||||||| |||||||||||| || |||    
T  12112580 ggtgtaaatctcgaatggttttctacagtgtagcagttaaccacccatttgtagttgagcttgttttatcctggaggcggtgtggttgatagtctgtctt 12112679  T
Q  127 gcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagata-------atagaat-gaa 218  Q
    |||||| ||||| ||||||||||||||||||||||  ||||||||| ||||||  |||| ||||||||||||||||||||||        || ||| |||    
T  12112680 gcacaactttggacagtgccacgaaacgtcttaaagagagcgacctagtcgtgattcaacctagtaacaacttcggtagatattcctttttaaaatagaa 12112779  T
Q  219 tttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagttact 306  Q
    |||||||||||||||||||  ||||| ||||  ||||||||||| ||||||||||||||    || |||||||||| ||||| |||||    
T  12112780 tttgaaaatccaaatacaacggtttgtaaatcaaaaaacaacaa-ttttaagacgtttcagactgctatgtctaccaaagaatttact 12112866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 59 - 259
Target Start/End: Complemental strand, 29715766 - 29715570
Alignment:
Q  59 atagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtctt 158  Q
    |||||||||||||||| ||||| ||  ||||||||||| | |||||||||||||||||||| | ||| |||||||||||| ||||| |||||||||||||    
T  29715766 atagttaaccgcacagctgtagctggacttgttttatcctagaggcggcgtggttgatagtcttcctagcacaattttggacagtgtcacgaaacgtctt 29715667  T
Q  159 aaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaaca 258  Q
    |||  |||||| |||||||||  |||| ||| |||||||||||||||||||||    ||||||| ||||| |||||||| |||||| |||| ||||||||    
T  29715666 aaaaagagcgatctggtcgtgactcaacctaataacaacttcggtagataata----gaatttggaaatctaaatacaacagtttggaaatccaaaaaca 29715571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 12971553 - 12971752
Alignment:
Q  8 gtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcgg 106  Q
    ||||| |||||||||| |||| ||||||| ||||||| ||||||||| |||| |||||||  | |||||||||| || |||||||||||| | |||||||    
T  12971553 gtcttggtaccatattggagg-tgtaattctcgaacggttttctacaatgcagtagttaattgaacagttgtagttgggcttgttttatcctagaggcgg 12971651  T
Q  107 cgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtaga 206  Q
    |||| |||||| | || |||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||  |||| ||||||||||||||| ||||    
T  12971652 cgtgattgataatctgtcttgcacaattttgggcaatgccacgaaacgtcttaaagagagagacctggtcgtgagtcaacctagtaacaacttcgataga 12971751  T

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Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 46964196 - 46964035
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||| |||||||||||||||||||| | ||||||| ||||||| |||||| ||||||||| || |||||||  |||| |||||||||| |     
T  46964196 aagagtggtcttaataccatatttgagggtgtaaatctcgaacggttttctatagtgcaatagttaaccacatagttgtatctgagtttgttttatccta 46964097  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||| ||| ||| ||||||| ||| ||||||||||||   |||||||| |||||||||||||    
T  46964096 gaggtggcatgggtgatagtctgcattgcacaattttaaacagtgccatgaaacgtcttaaa 46964035  T

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Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 6596270 - 6596388
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| ||||||||| |||| ||||||||| || | |||||| ||||||||||||||| ||    
T  6596270 aagagtggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacaatgcagtagttaaccacataattgtagctgagcttgttttatcctg 6596368  T
Q  100 gaggcggcgtggttgatagt 119  Q
    ||||||||||||||||||||    
T  6596369 gaggcggcgtggttgatagt 6596388  T

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Target: chr3; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2207661 - 2207759
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatctt 98  Q
    |||||||||||||||||||||||||||||||||||| ||||| | ||||||||||| || |||||||||||||| ||||||||| ||||||||||||||    
T  2207661 aagagtggtcttagtaccatatttgagggtgtaattctcgaagggttttctacagtacagtagttaaccgcacaattgtagatgggcttgttttatctt 2207759  T

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Target: chr3; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 55325957 - 55325847
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacga-ttttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||| ||||| ||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||  || |||||||||||| ||    
T  55325957 aagagtggtcttagtaccgtatttaagggtgtaattctcgatcgggttttctacagtgcatagttaaccgcacagttgtaactgggcttgttttatcctg 55325858  T
Q  100 gaggcggcgtg 110  Q
    |||||||||||    
T  55325857 gaggcggcgtg 55325847  T

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Target: chr3; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 27708928 - 27708803
Alignment:
Q  131 aattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatcca 230  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||  |||| |||||||||||||||||| ||||||    ||||||| |||||||    
T  27708928 aattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactcaacctagtaacaacttcggtatataata----gaatttggaaatcca 27708833  T
Q  231 aatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||| |||||| ||| ||||||||||||    
T  27708832 aatacaacagtttggaaa-tcaaaaacaaca 27708803  T

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Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 25726701 - 25726897
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgtt--ttatct 97  Q
    ||||||||||||||||||||||| || ||||||| | ||||||| |||||||||||||| ||||||||||||||||||||  ||  ||||||  |  ||     
T  25726701 aagagtggtcttagtaccatattgga-ggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtaactgcacttgtttatcctcc 25726799  T
Q  98 tggaggcggcgtggttgatagtttgcc---ttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagta 192  Q
    | ||||||||||||||| | | | |||   |||||||||| |||| |||||| ||||||||||||||  ||||||||||||||||  |||||||||||    
T  25726800 tagaggcggcgtggttggttgatagcctgattgcacaattctgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaatctagta 25726897  T

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Target: chr3; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 263
Target Start/End: Original strand, 2207760 - 2207878
Alignment:
Q  141 agtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatag 240  Q
    |||||||| ||||||||||||  ||||||||||||||||  |||||||||| ||||||||| || ||||||    |||||| ||||| ||||||||| ||    
T  2207760 agtgccactaaacgtcttaaaaagagcgacctggtcgtgactcaatctagtgacaacttcgataaataata----gaatttaaaaattcaaatacaacag 2207855  T
Q  241 tttgaaaattcaaaaacaacaat 263  Q
    ||| ||||| |||||||||||||    
T  2207856 tttaaaaatccaaaaacaacaat 2207878  T

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Target: chr3; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 60 - 208
Target Start/End: Complemental strand, 28125239 - 28125090
Alignment:
Q  60 tagttaaccgcacagttgtagatgagcttgtttt--atcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtct 157  Q
    ||||| |||||||| |||||| ||| ||||||||  ||| ||||||| | |||||| ||||| || |||||||||||||  |||||||||||||| ||||    
T  28125239 tagttgaccgcacaattgtagttgaacttgtttttaatcctggaggcagtgtggttaatagtctgtcttgcacaattttaagcagtgccacgaaatgtct 28125140  T
Q  158 taaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagata 208  Q
    ||||  |||| |||||||||||  |||| |||||||||| |||| ||||||    
T  28125139 taaa-agagcaacctggtcgtgactcaacctagtaacaatttcgatagata 28125090  T

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Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 20507748 - 20507679
Alignment:
Q  86 cttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgt 155  Q
    ||||||||||| | |||| || |||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  20507748 cttgttttatcctagaggtggtgtggttgatagtctgccttgcacaattttgagcagtgccaccaaacgt 20507679  T

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Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 16013821 - 16013729
Alignment:
Q  70 cacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaa-ttttgggcagtgccacgaaacgtcttaaa 161  Q
    |||| |||||||||||||| ||||||| ||||||||||||||| |||||| |  ||||||||| |||| |  |||| ||||||||||||||||    
T  16013821 cacaattgtagatgagcttattttatcctggaggcggcgtggtggatagtctatcttgcacaatttttagatagtgtcacgaaacgtcttaaa 16013729  T

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Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 48432503 - 48432420
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    ||||||||||||| | || ||||||||||||| ||  || ||||||||||||||||||||| ||||||||||||  |||||||||    
T  48432503 tgttttatcttggggacgtcgtggttgatagtctgtttt-cacaattttgggcagtgccacaaaacgtcttaaagagagcgacct 48432420  T

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Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 13022122 - 13022032
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | |||||||||| || ||| |||||| |||||||| |||||  ||||||||||||||||    
T  13022122 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtg 13022032  T

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Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 19276859 - 19276993
Alignment:
Q  28 ggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgcctt 126  Q
    ||||||| | |||||| |||||| ||| |||| ||| |||||||| |||| ||  ||||||||||||||  | |||||  ||||||||||||| || |||    
T  19276859 ggtgtaaatctcgaacaattttcaacattgcagtagctaaccgcatagttttaattgagcttgttttattctagaggcaacgtggttgatagtctgtctt 19276958  T
Q  127 gcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
     ||||||||| | ||||||||| ||| ||||||||    
T  19276959 acacaattttcgacagtgccacaaaaagtcttaaa 19276993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 47567111 - 47567235
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggag 102  Q
    |||| |||||||| |||||| |||  ||||||| ||||| |||||||||||||||| ||||||  | ||| |||||  |||| |||||||||||| ||||    
T  47567111 agtgctcttagtatcatattggaga-tgtaattctcgaaggattttctacagtgcaatagttattcacaccgttgtcaatgaacttgttttatctcggag 47567209  T
Q  103 gcggcgtggttgatagtttgccttgc 128  Q
    ||||  ||||||||||| ||| ||||    
T  47567210 gcggtatggttgatagtctgcattgc 47567235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 20090662 - 20090752
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  20090662 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 20090752  T

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Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 20095787 - 20095877
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  20095787 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 20095877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 26962154 - 26962064
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||| ||| |||| | |||||||||| || | | |||||||||||||||||||||  |||||| |||||||||    
T  26962154 tgttttatcctggagacggcgtgtttgttagtctaccttgcacaactt-gtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtg 26962064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 33089343 - 33089433
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| | ||| ||||||||||| |||| | |||||||||| |  ||| |||||| ||||||||||||||  ||||||||||||||||    
T  33089343 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacta-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 33089433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 34129169 - 34129259
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| ||| || |||||| ||||||||||||||   |||||||||||||||    
T  34129169 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 34129259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 48435816 - 48435911
Alignment:
Q  75 ttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    |||||| |||||| |||||||| ||| | || ||||||||||||| ||| |||||| ||||||  ||||| ||||||||||||||||  |||||||||    
T  48435816 ttgtagctgagct-gttttatcctggggacgtcgtggttgatagtctgc-ttgcactattttgaacagtgtcacgaaacgtcttaaagagagcgacct 48435911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 17364160 - 17364068
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcaca-attttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||| | ||| || |||||| ||||||||||||||   |||||||||||||||    
T  17364160 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 17364068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 3476946 - 3477036
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  3476946 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 3477036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 15763030 - 15763120
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||| ||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  15763030 tgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 15763120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 15768191 - 15768281
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||| ||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  15768191 tgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 15768281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 17368814 - 17368724
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  17368814 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 17368724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 20810467 - 20810377
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||||||  | ||| |||||  ||||||||||||||  || |||||||||||||    
T  20810467 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-ctagggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtg 20810377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 53119622 - 53119532
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| | ||| ||||||||||| |||| | |||||||||| || | | |||||| ||||||||||||||  |||||||||| |||||    
T  53119622 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gagtagtgccgcgaaacgtcttaaagagagcgacctgatcgtg 53119532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 1741108 - 1741153
Alignment:
Q  87 ttgttttatcttggaggcggcgtggttgatagtttgccttgcacaa 132  Q
    |||||||||| ||||||||||| ||||| || ||||||||||||||    
T  1741108 ttgttttatcctggaggcggcgcggttgttaatttgccttgcacaa 1741153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 2617256 - 2617329
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    ||||||||| ||||||||||| ||||| |||| | ||||||||||  | | | |||||| ||||||||||||||    
T  2617256 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaa 2617329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 38436991 - 38437063
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    ||||||||| ||||| ||||||||||| |||| | |||| |||||  ||||  |||||||||||||||||||||    
T  38436991 tgttttatcctggagacggcgtggttgttagtctacctttcacaa-cttggatagtgccacgaaacgtcttaaa 38437063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 17357933 - 17357841
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcaca-attttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||| | ||| || |||||| ||||||||||||||   | |||||||||||||    
T  17357933 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgtg 17357841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 10759734 - 10759992
Alignment:
Q  2 agagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgga 101  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  10759734 agagtggtcttagtaccatatttgagggtataattctcgaacggttttctaccgtgcatagttaaccgcacagttgtaaatgggcttgttttatcctgga 10759833  T
Q  102 ggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcg 201  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||  |||| |||||||||||||||    
T  10759834 ggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaa-agagcgacctggtcgtgactcaacctagtaacaacttcg 10759932  T
Q  202 gtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||    
T  10759933 gtagataatagaatgaatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 10759992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 306
Target Start/End: Complemental strand, 561649 - 561349
Alignment:
Q  2 agagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||||| ||||||| || |||||||||| ||||||||||||||| |||    
T  561649 agagtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatcctgg 561550  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||  |||| ||||||||||||||    
T  561549 aggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 561450  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaa 300  Q
    |||||||||||    ||||||| ||||||||||||||  ||||| |||| |||||||||||| ||||||||||||||  | || ||||||||||||||||    
T  561449 ggtagataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaa-ttttaagacgtttcgatctgctatgtctaccgaagaa 561355  T
Q  301 gttact 306  Q
    ||||||    
T  561354 gttact 561349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 35679788 - 35680048
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||    
T  35679788 aagagtggtcttagtaccatatttgagggtgtaattctcgaacgattttctacaatgcatagttaactgcacagttgtagttgagcttgttttatcctgg 35679887  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||  ||||||||||  | ||  |||| ||||||||| ||||    
T  35679888 aggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagagcgacctgc-catgactcaacctagtaacagcttc 35679986  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    ||||||||||| |||||||||| |||||||||||||| | ||||||||| ||||||||||||    
T  35679987 ggtagataatataatgaatttggaaatccaaatacaacaatttgaaaatccaaaaacaacaa 35680048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 7451941 - 7451684
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||| | |||||||||||||||||| || ||||||||||||||| ||    
T  7451941 aagagtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacagtgtagtagttaaccgcacagttgcagctgagcttgttttatcctg 7451842  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  7451841 gaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 7451742  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    |||||||||||| ||||||||| ||||||||||| |||||||||||    
T  7451741 cggtagataata----gaatttgaaaattcaaatacaacagtttgaaaatccaaaaacaaca 7451684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 29167885 - 29168142
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||| || |||||||||| || |||||||||||| ||    
T  29167885 aagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgtagttgggcttgttttatcctg 29167984  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  29167985 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 29168084  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    ||||||| |||| ||||||||| |||||| |||| |||||||||||    
T  29168085 cggtagataata----gaatttggaaattcaaatacaacagtttggaaatccaaaaacaaca 29168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 12103208 - 12102950
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| |||||| |||||| || |||||||||||| ||    
T  12103208 aagagtgatcttagtaccatatttaagggtgtaattctcgaacgattttctacagtgcagtagttaatcgcacatttgtagttgggcttgttttatcctg 12103109  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||   |||| |||||||||||||    
T  12103108 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtaactcaacctagtaacaactt 12103009  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||||||   || | |||||||||||||| |||||| |||| |||||||||||    
T  12103008 cggtagataatagaat---ttgggaaatccaaatacaacagtttggaaatccaaaaacaaca 12102950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 262
Target Start/End: Complemental strand, 556877 - 556620
Alignment:
Q  2 agagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||||| ||||||| || |||||||||| ||||||||||||||| |||    
T  556877 agagtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatcctgg 556778  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||  |||| ||||||||||||||    
T  556777 aggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 556678  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    |||||||||||    ||||||| ||||||||||||||  ||||| |||| ||||||||||||    
T  556677 ggtagataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaa 556620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 39523232 - 39522930
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| | ||||| |||||||||||||| |||||||||||||||||| || ||  ||||||||||| ||    
T  39523232 aagagtggtcttagtaccatatttggaggtgtaattcttgaacggttttctacagtgcagtagttaaccgcacagttgcagctggacttgttttatcctg 39523133  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  39523132 gaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 39523033  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatac-aatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaag 298  Q
    || |||||||||    ||||||| |||||||||||| || |||||| |||| |||||||||||| |||||||||||||  |  || ||||||||||||||    
T  39523032 cgatagataata----gaatttggaaatccaaatactaacagtttggaaatccaaaaacaacaa-ttttaagacgtttggtactgctatgtctaccgaag 39522938  T
Q  299 aagttact 306  Q
    ||||||||    
T  39522937 aagttact 39522930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 41587074 - 41587329
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||    
T  41587074 aagagtggtcttagtaccatatttgagggtgtaatt--cgaacggttttctacagtgcagtagttaaccgcacagttgtagctgagcttgttttatcctg 41587171  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || ||||||||||||||  ||||| ||||||||||||||||  |||| |||||||||||  |||| |||||||||||||    
T  41587172 gaggcggcgtggttgatagtctgtcttgcacaattttgaacagtgtcacgaaacgtcttaaagagagcaacctggtcgtgactcaaactagtaacaactt 41587271  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    |||||||||||| ||||||||| |||||  |||| |||||||||||    
T  41587272 cggtagataata----gaatttgaaaattcaaatacaacagtttagaaatccaaaaacaaca 41587329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 26667455 - 26667198
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||||| ||||||| || ||||||| || ||  ||||||||||| ||    
T  26667455 aagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctagagtgcagtagttaatcgaacagttgcagctggacttgttttatcctg 26667356  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  26667355 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 26667256  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    ||||||| || |||||||||||||||||| ||||  ||||||||||    
T  26667255 cggtagataata----gaatttggaactccaaatacaatagtttggaaatctaaaaacaaca 26667198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 26939052 - 26938795
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||||| ||||||| || ||||||| || ||  ||||||||||| ||    
T  26939052 aagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctagagtgcagtagttaatcgaacagttgcagctggacttgttttatcctg 26938953  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  26938952 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 26938853  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    ||||||| || |||||||||||||||||| ||||  ||||||||||    
T  26938852 cggtagataata----gaatttggaactccaaatacaatagtttggaaatctaaaaacaaca 26938795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 42001611 - 42001316
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||    |||||||||||||||||||| || |||||||||||| |||    
T  42001611 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagt----agttaaccgcacagttgtagctgggcttgttttatcctgg 42001517  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| ||||||||||||||    
T  42001516 aggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 42001417  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaa 300  Q
    |||||||||||    ||||||| ||||||||||||||  ||||| |||| |||||||||||| |||||| || ||||  | || ||||||||||||||||    
T  42001416 ggtagataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaa-ttttaaaacatttcgatctgctatgtctaccgaagaa 42001322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 39518593 - 39518332
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| | ||||| ||||||||| |||| |||||||||||||||||| || ||  ||||||||||| ||    
T  39518593 aagagtggtcttagtaccatatttggaggtgtaattcttgaacggttttctacactgcagtagttaaccgcacagttgcagctggacttgttttatcctg 39518494  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  39518493 gaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 39518394  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaattt 265  Q
    || |||||||||    ||||||| |||||||||||||| |||||| |||| |||||||||||||||    
T  39518393 cgatagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaacaattt 39518332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 4 - 262
Target Start/End: Original strand, 12501814 - 12502070
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggag 102  Q
    ||||||||||||| ||||||||  ||||||||| |||||||||||||||||||||| |||||||||| |||||||||| || |||||||||||| |||||    
T  12501814 agtggtcttagtatcatatttggaggtgtaattctcgaacgattttctacagtgcagtagttaaccgaacagttgtagctgggcttgttttatcctggag 12501913  T
Q  103 gcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcgg 202  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||  |||| |||||||||||||| |    
T  12501914 gcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcatgactcaacctagtaacaacttcag 12502013  T
Q  203 tagataatagaatgaatttgaaaatccaaatac-aatagtttgaaaattcaaaaacaacaa 262  Q
    |||||||||    ||||||| |||||||||||| || ||||||||||| ||||||||||||    
T  12502014 tagataata----gaatttggaaatccaaatacgaacagtttgaaaatccaaaaacaacaa 12502070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 37248708 - 37248964
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| ||   ||||||||||||||| || || |||||||||||| |||    
T  37248708 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctatagtacagtattaaccgcacagttgcagctgggcttgttttatcctgg 37248807  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||||||  |||| ||||||||||||||    
T  37248808 aggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 37248907  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||||||||||    ||||||| ||||||||||| || |||||| |||| |||||||||||    
T  37248908 ggtagataata----gaatttggaaatccaaatataacagtttggaaatccaaaaacaaca 37248964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 36423820 - 36423565
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||| |||||| |  ||||| |||| || |||||||||||  ||    
T  36423820 aagagtggtcttagcaccatatttggaggtgtaattctcgaacgattttctacagtgcattagttaatcaaacagtagtagctgggcttgttttattctg 36423721  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  |||||||||||||| |  |||| |||||||||||||    
T  36423720 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtcgcgactcaacctagtaacaactt 36423621  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaa 259  Q
    ||||||||||||    || |||| |||||||||||||| ||||||||||| |||||||||    
T  36423620 cggtagataata----gattttggaaatccaaatacaacagtttgaaaatccaaaaacaa 36423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 6514513 - 6514770
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||| |||||||||||||||| ||||||| | ||||| ||||||||||| |||| ||||||||| ||||||||||| | ||||||||||||| ||    
T  6514513 aagagtggttttagtaccatatttgaaggtgtaaatctcgaatgattttctacaatgcagtagttaaccacacagttgtagctaagcttgttttatcctg 6514612  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  ||| ||| ||||||||  |||| |||||||||||||    
T  6514613 gaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtcttaaagagagtgacttggtcgtgactcaacctagtaacaactt 6514712  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
     |||||||||||    ||||||| |||||||||||||| ||||| |||| |||||||||||||    
T  6514713 tggtagataata----gaatttggaaatccaaatacaacagttttaaaa-tcaaaaacaacaa 6514770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 12045052 - 12045309
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| |  ||||||||||| ||||||||||||||||||||| |  |||||||||||| ||    
T  12045052 aagagtggtcttagtaccatatt-gaaggtgtaattctcgaacggtagtctacagtgcagtagttaaccgcacagttgtagctatgcttgttttatcctg 12045150  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||  | ||||||||||||||  |||| |||||||||||||    
T  12045151 gaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtcgtgactcaacctagtaacaactt 12045250  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||||||   || ||||| | |||||||| |||||| |||| |||||||||||    
T  12045251 cggtagataatagaat---ttggaaaaccaaaatacaacagtttggaaatccaaaaacaaca 12045309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 36428892 - 36428640
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||| ||||||||||  ||||||||| |||| ||||||||||||||||| ||||||| || |||||||||| || |||||||||||| ||    
T  36428892 aagagtggtcttagaaccatatttggaggtgtaattctcgagcgattttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctg 36428793  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || | ||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  36428792 gaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 36428693  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaa 256  Q
    || |||||||||    ||||||| |||||||||||||| |||||| |||| ||||||    
T  36428692 cgttagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaa 36428640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 36942178 - 36942392
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||||| ||||||| || |||||||||| || |||||||||||| ||    
T  36942178 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctg 36942276  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  36942277 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 36942376  T
Q  200 cggtagataatagaat 215  Q
    ||||||||||||||||    
T  36942377 cggtagataatagaat 36942392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 41996842 - 41996590
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||    |||||||||||||||||||| || |||||||||||| |||    
T  41996842 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagt----agttaaccgcacagttgtagttgggcttgttttatcctgg 41996748  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||  |||| |||||||||||  |||| ||||||||||||||    
T  41996747 aggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtcgtgactcaacctagtaacaacttc 41996648  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    |||||||||||    ||||||| ||||||||||||||  ||||| |||| ||||||||||||    
T  41996647 ggtagataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaa 41996590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 36937424 - 36937638
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||||| ||||||| || |||||||||| || |||||||||||| ||    
T  36937424 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctg 36937522  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||  |||| ||| |||||||||    
T  36937523 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctaataacaactt 36937622  T
Q  200 cggtagataatagaat 215  Q
    ||||||||||||||||    
T  36937623 cggtagataatagaat 36937638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 3666114 - 3665857
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||| ||||||||||||| || |||||||||  |||||| |||||||||||||| ||||||||||||||||||||| ||  ||||||||||| |     
T  3666114 aagagtggtattagtaccatatt-gaaggtgtaattcccgaacggttttctacagtgcagtagttaaccgcacagttgtagttggacttgttttatccta 3666016  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||  |||| |||||||||||||    
T  3666015 gaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagtcgtgactcaacctagtaacaactt 3665916  T
Q  200 cggtagataatagaatgaatttgaaaatcc-aaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||| ||||    ||||||||||| || |||||||| |||||| |||| |||||||||||    
T  3665915 cggtagaaaata----gaatttgaaaaaccaaaatacaacagtttggaaatccaaaaacaaca 3665857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 6155331 - 6155589
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||||| ||||||| || |||||||||| || |||||||||||| ||    
T  6155331 aagagtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctg 6155430  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||| |||||||||||| || |||| | |||||||| ||||||||||||||||||||||  |||||||||| |||||  |||| |||||||||| ||    
T  6155431 gaggcggtgtggttgatagtctgtcttgtaaaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacctagtaacaattt 6155530  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||  ||||| ||||||    
T  6155531 cggtagataata----gaatttggaaatccaaatacaacagtttggaaaaccaaaatcaacaa 6155589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 40148078 - 40147828
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||| ||||||||||||||  ||||||||| ||||||| |||||||||||| | |||||||  | ||| ||| || ||||||| ||||||| ||    
T  40148078 aagagtggtcgtagtaccatatttggaggtgtaattctcgaacggttttctacagtgtagtagttaattgaacaattgaagctgagcttattttatcctg 40147979  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||  |||||||||| || ||  |||| ||| |||||||||    
T  40147978 gaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctgatcatgactcaacctaataacaactt 40147879  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaa 254  Q
    || |||||||||    ||||||| ||||||||||||||||||||| |||||||||    
T  40147878 cgatagataata----gaatttggaaatccaaatacaatagtttggaaattcaaa 40147828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 32461462 - 32461640
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||    
T  32461462 aagagtggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgaacttgttttatcctg 32461560  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  32461561 gaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtg 32461640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 11981193 - 11981455
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| ||||||| ||||||| |||||||||||||| ||||||| || ||||||||||||| |||||||||||  ||    
T  11981193 aagaatggtcttggtaccatattagagg-tgtaattctcgaacggttttctacagtgcaatagttaatcgaacagttgtagatgtgcttgttttattctg 11981291  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgt-gtatcaatctagtaacaact 198  Q
    |||||||||||||||||  | || ||||||||||||||||||||||||| ||||||||||||   |||||||||||| |   ||||| ||||||||||||    
T  11981292 gaggcggcgtggttgat--tctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagaaagcgacctggtcataaaatcaacctagtaacaact 11981389  T
Q  199 tcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattc--aaaaacaacaatttt 266  Q
    |||||||||||||    ||||||| |||||||| ||||| ||||||||||| |  |||||||||||||||    
T  11981390 tcggtagataata----gaatttggaaatccaactacaacagtttgaaaatccaaaaaaacaacaatttt 11981455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 20180975 - 20181233
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||| ||| ||||||||||||||||| | ||||||  |||||||||||||| |||||||||||||| |||||| ||||||||||||||| ||    
T  20180975 aagagtggtcttggtatcatatttgagggtgtaaatctcgaacagttttctacagtgcagtagttaaccgcacaattgtagttgagcttgttttatcatg 20181074  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||| ||||||||| ||||| || |||||| |||||||| || |||||||||||||||||||  ||| ||||||||||||  |||| ||| |||||| ||    
T  20181075 gaggtggcgtggttaatagtctgtcttgcataattttggacaatgccacgaaacgtcttaaagagagtgacctggtcgtgactcaacctaataacaattt 20181174  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagttt-gaaaattcaaaaacaaca 261  Q
    | ||||||||||    ||||||| ||||||||||||||  ||||  ||||| |||||||||||    
T  20181175 cagtagataata----gaatttggaaatccaaatacaacggtttaaaaaatccaaaaacaaca 20181233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 262
Target Start/End: Original strand, 12041858 - 12042102
Alignment:
Q  14 gtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggt 112  Q
    |||||||||| |||| ||||||| ||||||  |||| || |||||| ||||||| || |||||||||| ||  ||||||||||| |||||||||||||||    
T  12041858 gtaccatattggagg-tgtaattctcgaacagttttttatagtgcagtagttaatcgaacagttgtagctggacttgttttatcctggaggcggcgtggt 12041956  T
Q  113 tgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatca--atctagtaacaacttcggtagataat 210  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||  || |||||||||||||  |||  | |||||||||||||| ||||||||     
T  12041957 tgatagtttgccttgcatatttttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactcatgacctagtaacaacttcagtagataac 12042056  T
Q  211 agaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    |     |||||||||||||||||  || ||||||||||| ||||||||||||    
T  12042057 a----taatttgaaaatccaaat--aacagtttgaaaatccaaaaacaacaa 12042102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 85 - 261
Target Start/End: Original strand, 37652827 - 37652999
Alignment:
Q  85 gcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatca 184  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||||||||||| || || ||||||||||||||||  |||||||||| |||||  |||    
T  37652827 gcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttggacaatgtcacgaaacgtcttaaagagagcgacctgatcgtgactca 37652926  T
Q  185 atctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    | ||| |||||||||||||||||||||    ||||||| |||||||||||||| | |||| |||| |||||||||||    
T  37652927 acctaataacaacttcggtagataata----gaatttggaaatccaaatacaacaatttggaaatccaaaaacaaca 37652999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 12102803 - 12102950
Alignment:
Q  60 tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtctta 159  Q
    ||||||||||||||||||||| ||  ||||||||||| ||| | ||| |||||||||||| | |||||||||||||||| ||||||||| ||| ||||||    
T  12102803 tagttaaccgcacagttgtagttggtcttgttttatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtctta 12102902  T
Q  160 aattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagat 207  Q
    ||  ||||||||| ||||||  |||| |||||||||||||||||||||    
T  12102903 aagagagcgacctagtcgtgactcaacctagtaacaacttcggtagat 12102950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 16116189 - 16116362
Alignment:
Q  29 gtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttg 127  Q
    |||||||| ||||||| ||||||| |||||| |||||||| | || ||||||| ||| |||||||||||| ||||| |||||||||||||||||| ||||    
T  16116189 gtgtaattctcgaacggttttctatagtgcagtagttaacagtactgttgtagttgaacttgttttatctaggaggtggcgtggttgatagtttgtcttg 16116288  T
Q  128 cacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcg 201  Q
    ||||||||||||||||| |||||||||| ||||   |||| |||| ||||||  | || |||| ||||||||||    
T  16116289 cacaattttgggcagtgtcacgaaacgttttaaggagagcaacctagtcgtgacttaacctagcaacaacttcg 16116362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 9911332 - 9911128
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||| |   |||   ||| ||||| |||||||||||||| || ||||||||||| |||||| ||| |||||||||||||     
T  9911332 aagagtggtcttagtaccatatttaa---tgtgtcttttgaacggttttctacagtgcagtaattaaccgcacaattgtagttgaacttgttttatctta 9911236  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    || |||||||| ||| |||| ||||  |||||||||||  ||||||||| ||| ||||||||  || |||| | ||| |   |||| |||||||||||||    
T  9911235 ga-gcggcgtgattggtagtctgccccgcacaattttgaacagtgccacaaaatgtcttaaaaagaacgacattgtcctaactcaacctagtaacaactt 9911137  T
Q  200 cggtagata 208  Q
    |||||||||    
T  9911136 cggtagata 9911128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 15414794 - 15414993
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||||||| |||||| |||| ||||| ||||||| | ||||||| |||||| |||||||||||||| ||  |  ||  ||||  ||||| ||    
T  15414794 aagattggtcttagtagcatattggagg-tgtaaatttcgaaaggttttctatagtgcagtagttaaccgcacatttacatgtggacttgcattatcctg 15414892  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||| | |||||  ||||||||||||||||||||| ||||| ||||||  |||||  || ||||||  |||| | |||||||||||    
T  15414893 gaggcggcgtggttgatattctgcctcacacaattttgggcagtgccacaaaacgacttaaagagagcgttctagtcgtgactcaaccaagtaacaactt 15414992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4872104 - 4871988
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| || ||| ||||| || |||| ||||||||||| || ||||||| || |||||||||| ||||||||||||||| ||    
T  4872104 aagaatggtctttgtaccatatt-gaaggtataattctcaaacggttttctacagtacagtagttaatcgaacagttgtagttgagcttgttttatcatg 4872006  T
Q  100 gaggcggcgtggttgata 117  Q
    ||||||||||||||||||    
T  4872005 gaggcggcgtggttgata 4871988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 13582690 - 13582780
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  13582690 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaatt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 13582780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 24435869 - 24435959
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| |||||||||||||||| | ||||||||||  ||||  |||||| ||||||||||||||  ||||||||||||||||    
T  24435869 tgttttatcctggagacggcgtggttgatagtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 24435959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 37550029 - 37550082
Alignment:
Q  85 gcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgg 138  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  37550029 gcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgg 37550082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 7805166 - 7805076
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||| ||||||||||||    
T  7805166 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagggacctggtcgtg 7805076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 14374230 - 14374140
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | || ||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  14374230 tgttttatcctggagacggcgtggttgttagtctaccctgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 14374140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 18265489 - 18265588
Alignment:
Q  71 acagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgac 170  Q
    |||||||||| |||||| |||||||| ||| | || ||||||||||||| ||  |||||||||||| ||||||| ||| ||||||||||||  |||||||    
T  18265489 acagttgtagctgagct-gttttatcatggggacgtcgtggttgatagtctga-ttgcacaattttaggcagtgtcacaaaacgtcttaaagagagcgac 18265586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 36253921 - 36253831
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||||||||| ||||| |||| | ||||||||||  || || |||||| ||||||||||||||   |||||||||||||||    
T  36253921 tgttttatcctggaggcggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 36253831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 37550106 - 37550170
Alignment:
Q  193 acaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||||||||||||||||||||||    ||| |||||||||||||| | ||||||||| |||||||||||    
T  37550106 acaacttcggtagataatagaat----ttggaaatccaaatacaacaatttgaaaatccaaaaacaaca 37550170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 1414050 - 1414141
Alignment:
Q  87 ttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    |||||||||||||||| ||||| ||||| |||| | ||||||||||  || || |||||| ||||||||||||||   ||||||||| |||||    
T  1414050 ttgttttatcttggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtg 1414141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 17510153 - 17510063
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  17510153 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 17510063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 36937638 - 36937702
Alignment:
Q  241 tttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagttact 306  Q
    |||| |||| |||||||||||||||| ||||||||||  | || |||||||| |||||||||||||    
T  36937638 tttggaaatccaaaaacaacaatttt-aagacgtttcgatctgctatgtctatcgaagaagttact 36937702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1429907 - 1429943
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt 37  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  1429907 aagaatggtcttagtaccatatttgagggtgttattt 1429943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 9726638 - 9726678
Alignment:
Q  40 gaacgattttctacagtgca-tagttaaccgcacagttgta 79  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  9726638 gaacggttttctacagtgcagtagttaaccgcacagttgta 9726678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13301395 - 13301431
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt 37  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  13301395 aagagtggtcttagtaccatattagagggtgttattt 13301431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 24771356 - 24771447
Alignment:
Q  87 ttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    |||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| |||||| |||||||   |||||||||||||||    
T  24771356 ttgttttatcctggagacggcgcggttgttagtctaccttgcacaacttaggt-agtgccgcgaaacatcttaaagaaagcgacctggtcgtg 24771447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 171; Significance: 8e-92; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 7287 - 7024
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||| ||| ||||||||||| |||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||    
T  7287 aagagtggtcttaatacaatatttgagggcgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctgagcttgttttatcctg 7188  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  7187 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 7088  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaattttt 267  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||| ||||||||||| |||||    
T  7087 cggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaacagttttt 7024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 5e-90; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 33416729 - 33416473
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  33416729 aagagcggtcttagtaccgtatttgagggtgtaattctcgaacggttttctacagtgcatagttaaccgcacagttgtagctgggcttgttttatcttgg 33416630  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  || |||||||||||||  |||| ||||||||||||||    
T  33416629 aggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggtcgtgactcaacctagtaacaacttc 33416530  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||||||||||    ||||||| |||| ||||||||| |||||| |||| |||||||||||    
T  33416529 ggtagataata----gaatttggaaattcaaatacaacagtttggaaatccaaaaacaaca 33416473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 44925836 - 44926092
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| |||    
T  44925836 aagagtggttttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcatagttaaccgcatagttgtagatgaccttgttttatcctgg 44925935  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||  |||| ||||||||||||||    
T  44925936 aggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 44926035  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||    || |||||||||||||||||||||  |||||| ||||  ||||||||||    
T  44926036 ggtagata----aaagaatttgaaaatccaaatacagcagtttggaaatcaaaaaacaaca 44926092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 18876279 - 18876537
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| ||    
T  18876279 aagagtggtattagtatcatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgagtttgttttatcctg 18876378  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  18876379 gaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactcaacctagtaacaactt 18876477  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaat 263  Q
    ||||| ||||||    ||||||| |||||||||||||  |||||| |||| |||||||||||||    
T  18876478 cggtatataata----gaatttggaaatccaaatacagcagtttggaaatccaaaaacaacaat 18876537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 17026117 - 17025818
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| ||||||| ||||||| |||||||||||||| ||||||| || |||||||||| |   ||||||||||| ||    
T  17026117 aagaatggtcttggtaccatattggagg-tgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctagacttgttttatcctg 17026019  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||| |||| |||||||| || |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  17026018 gaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 17025919  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||||||||||||| | |||||||||  ||||||||||| ||||||||||||||| |||||||||||||||| |||    
T  17025918 cggtagataata----gaatttggaaatccaaatacaacaatttgaaaatctaaaaacaacaa-ttttaagacgtttctatatgttatgtctaccg-aga 17025825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 17556609 - 17556310
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| ||||||| ||||||| |||||||||||||| ||||||| || |||||||||| |   ||||||||||| ||    
T  17556609 aagaatggtcttggtaccatattggagg-tgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctagacttgttttatcctg 17556511  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||| |||| |||||||| || |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  17556510 gaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 17556411  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||||||||||||| | |||||||||  ||||||||||| ||||||||||||||| |||||||||||||||| |||    
T  17556410 cggtagataata----gaatttggaaatccaaatacaacaatttgaaaatctaaaaacaacaa-ttttaagacgtttctatatgttatgtctaccg-aga 17556317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 34118649 - 34118350
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||| |||||||||||||| || ||||||| | ||||||  |||||||| ||||| |||||||| |||||||||||| || |||||||||||| |     
T  34118649 aagagtggccttagtaccatattcgaaggtgtaaatctcgaacagttttctacggtgcagtagttaacagcacagttgtagctgggcttgttttatccta 34118550  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
     ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  34118549 aaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 34118450  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    | ||||||||||    ||||||| ||||| ||||||| ||||||| |||| |||||||||||| ||||||||||||||  | || |||||||||||||||    
T  34118449 cagtagataata----gaatttggaaatctaaatacattagtttggaaatccaaaaacaacaa-ttttaagacgtttcgatctgctatgtctaccgaaga 34118355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 31449779 - 31450036
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||||| |||||||||||||||||| || ||  ||||||||||| ||    
T  31449779 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctggacttgttttatcctg 31449877  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  31449878 gaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 31449977  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    || |||||||||    ||||||| |||||||||||||| | |||| |||| ||||||||||||    
T  31449978 cgatagataata----gaatttggaaatccaaatacaacactttggaaatccaaaaacaacaa 31450036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 1807656 - 1807397
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgtttt-atctt 98  Q
    ||||||| |||||||||||||||||| ||||||| | ||||||| |||||||||||||| ||||||||||||||||||||| ||  |||||||| ||| |    
T  1807656 aagagtgatcttagtaccatatttgaaggtgtaaatctcgaacggttttctacagtgcactagttaaccgcacagttgtagctggacttgtttttatcct 1807557  T
Q  99 ggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaact 198  Q
     |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||  |||| ||||||||||||    
T  1807556 agaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctagtcgtgactcaacctagtaacaact 1807457  T
Q  199 tcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    |||||||||||||    ||||| |||||| ||||||||| | ||||||||| ||||||||||||    
T  1807456 tcggtagataata----gaattggaaaattcaaatacaacaatttgaaaatccaaaaacaacaa 1807397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 19166809 - 19166608
Alignment:
Q  9 tcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggc 107  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  19166809 tcttagtaccatatttgagggtgtaattctcgaacggttttctatagtgcagtagttaacagcacagttgtagttgagcttgttttatcctggaggcggc 19166710  T
Q  108 gtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagat 207  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||  |||| |||||||||||||||||||||    
T  19166709 gtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtagat 19166610  T
Q  208 aa 209  Q
    ||    
T  19166609 aa 19166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 4 - 277
Target Start/End: Original strand, 38182152 - 38182420
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggag 102  Q
    |||||| |||||||||||||||| ||||||| | ||||||| |||| || |||||| |||||||| |||||||||||| || |||||||||||| |||||    
T  38182152 agtggttttagtaccatatttgaaggtgtaaatctcgaacggttttttatagtgcagtagttaacagcacagttgtagctgtgcttgttttatcctggag 38182251  T
Q  103 gcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcgg 202  Q
    ||||||||||||||| | ||||||||||||| ||||| ||||||||||||||| |||||  ||||||||||||||||  |||| || |||||||||||||    
T  38182252 gcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacctggtcgtgactcaacct-gtaacaacttcgg 38182350  T
Q  203 tagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttc 277  Q
    |||||||||    ||||||| |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  38182351 tagataata----gaatttggaaatccaaatacaacagtttgacaattcaaaaacaacaa-ttttaagacgtttc 38182420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 40125797 - 40125999
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||| || |||||||||||||||    
T  40125797 aagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacggtgcagtagttaatcgaacagttgtagctgggcttgttttatcttg 40125896  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||  |||| |||||||||||||    
T  40125897 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaactt 40125996  T
Q  200 cgg 202  Q
    |||    
T  40125997 cgg 40125999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 36683762 - 36683551
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||| ||    
T  36683762 aagagtggtcttagtaccatatttgagggtgtaattctcaaacgattttctacagtgcagtagttaatcgcacagatgtagctgaccttgttttatcctg 36683663  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||  ||||||||| ||| ||  |||| ||||||||||||     
T  36683662 gaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctagtcatgactcaacctagtaacaactc 36683563  T
Q  200 cggtagataata 211  Q
    ||||||||||||    
T  36683562 cggtagataata 36683551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 24090805 - 24090602
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    ||||||||||||||||| |||||||||| ||||| | ||||||| |||||||||    |||||||||||||||||||||||| |||||||||||||||||    
T  24090805 aagagtggtcttagtacaatatttgaggatgtaaatctcgaacggttttctaca----atagttaaccgcacagttgtagataagcttgttttatcttgg 24090710  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||| |||| |||||| | |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||  |||| ||||||||||||||    
T  24090709 aggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 24090610  T
Q  201 ggtagata 208  Q
    ||||||||    
T  24090609 ggtagata 24090602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 1910881 - 1911139
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||| ||||||||||||  |||||| | ||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||    
T  1910881 aagagtggtcttaataccatatttgaatgtgtaaatctcgaatggttttctacagtgcagtagttaaccgcacagttgtagttgagcttgttttatactg 1910980  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||| |||||||||||||| ||| |||||||||||||   |||||||||||||||||||||  |||||||||| |||||  | || ||| |||||||||    
T  1910981 gaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctgatcgtgacttaacctaataacaactt 1911080  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    || |||||||||    |||||||||||||||||||||| |||||| |||| ||||||||||||    
T  1911081 cgatagataata----gaatttgaaaatccaaatacaacagtttggaaatccaaaaacaacaa 1911139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 17953800 - 17953992
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagtt-gtagatgagcttgttttatcttggaggcggcgtggttg 114  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||| | ||||||| |||| |||||||||||||||||||||||||||||||||    
T  17953800 ccatatttgagggtgtaattctcgaacgattttctacagtgcagtagttaatcacacagtttgtaggtgagcttgttttatcttggaggcggcgtggttg 17953899  T
Q  115 atagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagat 207  Q
    ||| | || ||||||||||||||||||||||||||||||||||||||   |||||| |||||||   |||| |||||||||||||||||||||    
T  17953900 atattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgttactcaacctagtaacaacttcggtagat 17953992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 15875596 - 15875787
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttga 115  Q
    ||||||||||| |||||||| | ||||| ||||||| |||||| ||||||| || ||| |||||| ||||||||||||||| ||||||||||||||||||    
T  15875596 ccatatttgagagtgtaattcttgaacggttttctatagtgcagtagttaatcgtacaattgtagctgagcttgttttatcctggaggcggcgtggttga 15875695  T
Q  116 tagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagat 207  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||   ||||| |||||||||||||| |||||    
T  15875696 tagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctggtcgtaactcaatttagtaacaacttcgatagat 15875787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 259
Target Start/End: Original strand, 28559570 - 28559821
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggag 102  Q
    |||||||||| |||| |||| || ||||||||| ||||||| |||| ||||||||| ||||||| || |||||| ||  || |||| ||||||| || ||    
T  28559570 agtggtcttactaccgtatt-gaaggtgtaattctcgaacggttttttacagtgcaatagttaatcgaacagttctaactgggcttattttatcctgcag 28559668  T
Q  103 gcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcgg 202  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||| | ||||||  |||| ||||||||||||||||    
T  28559669 acggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacgtcttatagagagcgacattgtcgtgactcaacctagtaacaacttcgg 28559768  T
Q  203 tagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaa 259  Q
    |||||||||     |||||  |||||||||||||| |||||| |||| |||||||||    
T  28559769 tagataata----taatttataaatccaaatacaacagtttggaaatccaaaaacaa 28559821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 2965813 - 2965634
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||| | || || | |||||||||||||| |||||||| ||| |||||||| ||  ||||||||||| |     
T  2965813 aagagtggtcttagtaccatatttgagggtgtaaatctcaaatggttttctacagtgcagtagttaactgcatagttgtagctggacttgttttatccta 2965714  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||| |||||||||||| || ||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||    
T  2965713 gaggcggtgtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacgttttaaagagagcgacctggtcgtg 2965634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 23548547 - 23548752
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggag 102  Q
    ||||||||||||| ||||||| |||||| || | | ||||| ||||||||| |||| ||||||||||| ||||||||| ||| ||||||||||| | |||    
T  23548547 agtggtcttagtatcatatttaagggtgaaaatcttgaacggttttctacaatgcagtagttaaccgcgcagttgtagctgaacttgttttatcctagag 23548646  T
Q  103 gcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcgg 202  Q
    ||| |||||||||||||  |||||||||||||||   |||||||||||||||||||| |  |||||||| |||||||  |||| ||||||||||||||||    
T  23548647 gcgacgtggttgatagtccgccttgcacaattttacacagtgccacgaaacgtcttatagagagcgaccaggtcgtgactcaacctagtaacaacttcgg 23548746  T
Q  203 tagata 208  Q
    ||||||    
T  23548747 tagata 23548752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 110 - 306
Target Start/End: Original strand, 4238337 - 4238529
Alignment:
Q  110 ggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataa 209  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||  |||| |||||||||||||||||||||||    
T  4238337 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataa 4238436  T
Q  210 tagaatgaatttgaaaatccaaatacaatagtttgaaaattc-aaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagttact 306  Q
    ||    ||||||| |||||||||||||| |||||| |||| | ||||||||||| ||||||||||||||  | || ||| |||| |||||||||||||    
T  4238437 ta----gaatttggaaatccaaatacaacagtttggaaatccaaaaaacaacaa-ttttaagacgtttcgatctgctatatctatcgaagaagttact 4238529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 124 - 265
Target Start/End: Original strand, 40130722 - 40130859
Alignment:
Q  124 cttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttga 223  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||||||||||||||    |||||||     
T  40130722 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataata----gaatttgg 40130817  T
Q  224 aaatccaaatacaatagtttgaaaattcaaaaacaacaattt 265  Q
    |||||||||||||| |||||| |||| |||||||||||||||    
T  40130818 aaatccaaatacaacagtttggaaatccaaaaacaacaattt 40130859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 110 - 256
Target Start/End: Original strand, 4243076 - 4243218
Alignment:
Q  110 ggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataa 209  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||  |||| ||||||||||||||| |||||||    
T  4243076 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataa 4243175  T
Q  210 tagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaa 256  Q
    ||    ||||||| |||||||||||||| |||||| |||| ||||||    
T  4243176 ta----gaatttggaaatccaaatacaacagtttggaaatccaaaaa 4243218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 215
Target Start/End: Original strand, 2355458 - 2355586
Alignment:
Q  87 ttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaat 186  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||||   |||| ||||||||||||||||  ||| ||  |||| |||  |||||    
T  2355458 ttgttttatctttgaggcggcgtggttgatagtctgtcttgcacaattttgaaaagtgtcacgaaacgtcttaaaaagagtgatatggtggtgactcaat 2355557  T
Q  187 ctagtaacaacttcggtagataatagaat 215  Q
    ||||||||||||| |||||||||||||||    
T  2355558 ctagtaacaactttggtagataatagaat 2355586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 43302604 - 43302714
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||| |||||||||||| ||| || ||||||||| |||||||||||||||||||||| ||||||||||||||| || || || |||||||||||| ||    
T  43302604 aagagtagtcttagtaccacatt-gaaggtgtaattctcgaacgattttctacagtgcagtagttaaccgcacaggtgcagctgggcttgttttatcctg 43302702  T
Q  100 gaggcggcgtgg 111  Q
    ||||||||||||    
T  43302703 gaggcggcgtgg 43302714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 12820472 - 12820370
Alignment:
Q  51 tacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacg 149  Q
    ||||||||| ||||||  ||||||||||||  ||| ||||||||||| ||||||||| ||| |||||||||||| |||||||||||| ||||||||||||    
T  12820472 tacagtgcagtagttagtcgcacagttgtacctgaacttgttttatcctggaggcggtgtgattgatagtttgctttgcacaattttaggcagtgccacg 12820373  T
Q  150 aaa 152  Q
    |||    
T  12820372 aaa 12820370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 178
Target Start/End: Original strand, 43302715 - 43302809
Alignment:
Q  85 gcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaa-ttttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgt 178  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||| |||||| ||||||||||||||||||||||  || ||||| ||||||    
T  43302715 gcttgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagagaacgaccgggtcgt 43302809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 15951467 - 15951584
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacag--tgca-tagttaaccgcacagttgtagatgagcttgttttatct 97  Q
    ||||||||||||||||||||||  ||  |||||| | ||||||| ||||||||||  |||| |||||||| |||||||||||| || ||||||||||||     
T  15951467 aagagtggtcttagtaccatatc-gaacgtgtaaatctcgaacggttttctacagagtgcagtagttaactgcacagttgtagctgggcttgttttatc- 15951564  T
Q  98 tggaggcggcgtggttgata 117  Q
    ||||||||||||||||||||    
T  15951565 tggaggcggcgtggttgata 15951584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 34517351 - 34517264
Alignment:
Q  71 acagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||||||||| |||| |||||||||||||| |||| ||||||||||||| | |||||||||||||| | ||||||||||||||||||||||    
T  34517351 acagttgtagttgag-ttgttttatcttgggggcgtcgtggttgatagtct-ccttgcacaatttt-gacagtgccacgaaacgtcttaaa 34517264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 10933592 - 10933473
Alignment:
Q  23 ttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagttt 121  Q
    |||| ||||||||| |||||| ||| ||||||||||| ||||||| | ||||||||||| || | |||||||||| |||||||| ||||||||||||  |    
T  10933592 ttgaaggtgtaattctcgaacaattctctacagtgcagtagttaatcacacagttgtagttg-gtttgttttatcatggaggcgacgtggttgatagcct 10933494  T
Q  122 gccttgcacaattttgggcag 142  Q
      || ||||||||||||||||    
T  10933493 atctggcacaattttgggcag 10933473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 33616727 - 33616817
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  33616727 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 33616817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 29220359 - 29220240
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatc 187  Q
    ||||||||| | ||||| |||||||||||||| | |||||||||||||||  ||||| ||| ||||||||||||  ||| ||||  ||||||  |||| |    
T  29220359 tgttttatccttgaggcagcgtggttgatagtctaccttgcacaattttgatcagtgacacaaaacgtcttaaa--gagtgacccagtcgtgactcaacc 29220262  T
Q  188 tagtaacaacttcggtagataa 209  Q
    || |||||||||||||| ||||    
T  29220261 tactaacaacttcggtaaataa 29220240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4238254 - 4238333
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtag 80  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||||| ||||||| || ||||||||||    
T  4238254 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtag 4238333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4242993 - 4243072
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtag 80  Q
    |||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||||| ||||||| || ||||||||||    
T  4242993 aagattggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtag 4243072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 19430109 - 19430019
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| | ||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  19430109 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 19430019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 19435611 - 19435521
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| | ||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  19435611 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 19435521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 19566258 - 19566168
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| | ||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  19566258 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 19566168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 19571760 - 19571670
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| | ||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  19571760 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 19571670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 31030623 - 31030533
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||| ||||| ||| |||| | ||||||||||||||  ||||||||||||||||    
T  31030623 tgttttatcctggagacggcgtggttgttagtctaccttgcataattt-gggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtg 31030533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 32015795 - 32015705
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||||||||||||||||||  ||||||||||||||||    
T  32015795 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccacgaaacgtcttaaagagagcgacctggtcgtg 32015705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 19915148 - 19915073
Alignment:
Q  182 tcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||| |||||||||||||||||||||||||    ||||||| |||| ||||||||| |||||| |||| |||||||||||    
T  19915148 tcaacctagtaacaacttcggtagataata----gaatttggaaatacaaatacaacagtttgtaaatccaaaaacaaca 19915073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 2470070 - 2469986
Alignment:
Q  87 ttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    |||||||||| ||| | || ||| ||||||||| ||| ||||||||||||| |||||||||| ||||||||||||  |||||||||    
T  2470070 ttgttttatcctggggacgtcgtagttgatagtctgc-ttgcacaattttgagcagtgccacaaaacgtcttaaagagagcgacct 2469986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 5883949 - 5883913
Alignment:
Q  221 tgaaaatccaaatacaatagtttgaaaattcaaaaac 257  Q
    |||||||||||||||||||||||||||||||||||||    
T  5883949 tgaaaatccaaatacaatagtttgaaaattcaaaaac 5883913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 179
Target Start/End: Complemental strand, 7902686 - 7902567
Alignment:
Q  60 tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtctta 159  Q
    ||||||| |||||| |||| ||||  ||||||||||| | ||| |||||||||||||| | || |||  ||||||||||| | || |||||||| | |||    
T  7902686 tagttaatcgcacaattgttgatggacttgttttatcctagagacggcgtggttgataatatgtcttatacaattttgggtaatgtcacgaaacatttta 7902587  T
Q  160 aattgagcgacctggtcgtg 179  Q
    ||  ||||||| ||||||||    
T  7902586 aagagagcgacttggtcgtg 7902567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 17793550 - 17793475
Alignment:
Q  86 cttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    ||||||||||| |||||  | |||||||||||||||| |||| ||||||||| |||||| |  |||||||||||||    
T  17793550 cttgttttatcgtggagatgacgtggttgatagtttgacttgtacaattttgagcagtgtcgtgaaacgtcttaaa 17793475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 17955789 - 17955879
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| ||| || |||||| ||||||||||||||   |||||||||||||||    
T  17955789 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtg 17955879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 40126000 - 40126074
Alignment:
Q  229 caaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagtta 304  Q
    ||||||||| |||||| |||| |||||||||||| ||||||||||||||  | || || |||||||||||||||||    
T  40126000 caaatacaacagtttggaaatccaaaaacaacaa-ttttaagacgtttcgatctgctacgtctaccgaagaagtta 40126074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 19954348 - 19954295
Alignment:
Q  107 cgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    ||||||||||||| ||| ||| |||||||||||||||||||| ||||||||||||    
T  19954348 cgtggttgatagtctgc-ttgtacaattttgggcagtgccacaaaacgtcttaaa 19954295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 19949892 - 19949832
Alignment:
Q  109 tggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgac 170  Q
    ||||||||||| ||| |||| |||||||||||||||||||||||| |||||||  |||||||    
T  19949892 tggttgatagtctgc-ttgctcaattttgggcagtgccacgaaacttcttaaagagagcgac 19949832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 4544286 - 4544334
Alignment:
Q  124 cttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    |||||||||||||| ||||||||| |||||||||||||  |||||||||    
T  4544286 cttgcacaattttgagcagtgccatgaaacgtcttaaagagagcgacct 4544334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 13584453 - 13584355
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattt-------tgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | |||||||||| ||       |||| |||||| ||||||||||||||  ||||||||||||||||    
T  13584453 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 13584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 21644081 - 21644171
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  21644081 tgttttatcctggagtcggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 21644171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 201
Target Start/End: Original strand, 24673319 - 24673438
Alignment:
Q  82 tgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgta 181  Q
    |||||||||||||| ||||| | |  |||| ||||||| |  |||||| |||||||  ||||| |||||||||| |||||  |||||| ||| ||||       
T  24673319 tgagcttgttttattttggaagtgttgtgggtgatagtctatcttgcataattttgaacagtgtcacgaaacgttttaaaaagagcgatctgatcgtaac 24673418  T
Q  182 tcaatctagtaacaacttcg 201  Q
    |||| |||||||||||||||    
T  24673419 tcaacctagtaacaacttcg 24673438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 27415689 - 27415539
Alignment:
Q  5 gtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggagg 103  Q
    ||||||||||||||||| | || | ||||||||| ||||||||  ||||  |||| || |||| |||||| |||||| |  |||||||||||  || |||    
T  27415689 gtggtcttagtaccatagtggatg-tgtaatttttgaacgattagctacgatgcaatatttaatcgcacaattgtagttatgcttgttttattctgaagg 27415591  T
Q  104 cggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgt 155  Q
    || ||||||||||| || | ||  |||||| || || |||||||||||||||    
T  27415590 cgacgtggttgataattcgtctgccacaatcttaggtagtgccacgaaacgt 27415539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8331270 - 8331316
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtg-taattttcgaacgat 46  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||    
T  8331270 aagagtggtcttagtaccatattagagggtgttatttttcgaacgat 8331316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34818612 - 34818658
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt-tcgaacgat 46  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||||    
T  34818612 aagagtggtcttagtaccatattagagggtgttatttctcgaacgat 34818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 42514374 - 42514461
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtc 176  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   ||||||||||||    
T  42514374 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtc 42514461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 1e-87; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 4930416 - 4930164
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||| ||    
T  4930416 aagagtggtcttagtaccatatatgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagttgggcttgttttatcctg 4930317  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  4930316 gaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 4930217  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaa 256  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||||||||||    
T  4930216 cggtagataata----gaatttggaaatccaaatacaacagtttggaaattcaaaaa 4930164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 44423049 - 44423308
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||| ||    
T  44423049 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatggacttgttttatcctg 44423148  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||| ||||||||| ||||||| |||||||||| ||||||||||||||||||||||  |||||| ||| |||||  |||| |||||||||||||    
T  44423149 gaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacgtcttaaagagagcgatctgatcgtgactcaacctagtaacaactt 44423248  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
     |||||||||||||||   || | |||||||||||||| ||||||||||| ||||||||||||    
T  44423249 tggtagataatagaat---ttgggaaatccaaatacaacagtttgaaaatccaaaaacaacaa 44423308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 8268477 - 8268174
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgatttt-ctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatctt 98  Q
    ||||||| |||||||||||||||||  ||||||||| ||||||| |||| |||| ||||| ||||||| || |||||||||| ||  ||||||||||| |    
T  8268477 aagagtgatcttagtaccatatttggaggtgtaattatcgaacggtttttctacggtgcagtagttaatcgaacagttgtagctggacttgttttatcat 8268378  T
Q  99 ggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaact 198  Q
    ||||| ||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||  ||||||||||||||||  ||||| |||||||||||    
T  8268377 ggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaatatagtaacaact 8268278  T
Q  199 tcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaag 298  Q
    |||||||||||||    ||||||| |||| ||||||||| |||||| |||| |||||||||||| ||||||||||||||  | || ||||||||||||||    
T  8268277 tcggtagataata----gaatttggaaatgcaaatacaacagtttggaaatccaaaaacaacaa-ttttaagacgtttcgatctgctatgtctaccgaag 8268183  T
Q  299 aagttacta 307  Q
    || ||||||    
T  8268182 aaattacta 8268174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 26341382 - 26341137
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| | ||| |||||||||||||| | ||||||| || |||||||||| ||  ||||||||||| ||    
T  26341382 aagagtggtcttagtaccatatttggaggtgtaattcttgaatgattttctacagtgtagtagttaatcgaacagttgtagctggacttgttttatcctg 26341283  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||  |||| |||||||||||||    
T  26341282 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 26341183  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaat 249  Q
    ||||||||||||    || |||| |||||||||||||| |||||||||||    
T  26341182 cggtagataata----gattttggaaatccaaatacaacagtttgaaaat 26341137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 13314148 - 13314419
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||||| |||||||  | |||||||||| ||||||||||||||| ||    
T  13314148 aagagtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacagtgcagtagttaattgaacagttgtagctgagcttgttttatcctg 13314247  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||| ||||| ||||||| | ||||||||||||||||||||| |||||||||||||||||  |||||| |||||||||  |||| ||||||||||||     
T  13314248 gaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaacta 13314347  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgttt 276  Q
    ||||||||| ||    ||||||| |||||||||||||| |||||| |||  ||||||||| || |||||||||||||    
T  13314348 cggtagatagta----gaatttggaaatccaaatacaacagtttggaaacccaaaaacaataa-ttttaagacgttt 13314419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 4579675 - 4579484
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttga 115  Q
    |||||||||||||||||||| | ||||| |||||||||||||| ||||||| ||||||||||||| ||  ||||||||||| ||||||||||||||||||    
T  4579675 ccatatttgagggtgtaattcttgaacggttttctacagtgcagtagttaatcgcacagttgtagctggacttgttttatcctggaggcggcgtggttga 4579576  T
Q  116 tagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagat 207  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| ||||||||||||||| |||||    
T  4579575 tagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagat 4579484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 23246861 - 23247052
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttga 115  Q
    |||||||||||||||||||||| ||||| ||||||| |   || ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  23246861 ccatatttgagggtgtaattttggaacggttttctataaaacagtagttaatcgcacagttgtaggtgagcttgttttatcctggaggcggcgtggttga 23246960  T
Q  116 tagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagat 207  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||  ||||||||||||||||||||||||||    
T  23246961 tagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactcaatctagtaacaacttcggtagat 23247052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 23866250 - 23866072
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||| |||||||||||||||||| || ||||||||||||||| ||    
T  23866250 aagagtggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgagcttgttttatcctg 23866152  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  23866151 gaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtg 23866072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 44510594 - 44510804
Alignment:
Q  5 gtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcata-gttaaccgcacagttgtagatgagcttgttttatcttggagg 103  Q
    ||||||||||||||||||| || ||||||||| ||||||| |||||||||||||| | |||||||||||||||| || ||||||||||||||| ||||||    
T  44510594 gtggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagaagttaaccgcacagttgcagctgagcttgttttatcctggagg 44510692  T
Q  104 cggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggt 203  Q
    |||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||  |||| | |||||||||  |||| |||||||||||||||||    
T  44510693 cggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcaatctggtcgtgactcaacctagtaacaacttcggt 44510792  T
Q  204 agataatagaat 215  Q
    ||||||||||||    
T  44510793 agataatagaat 44510804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 27238425 - 27238185
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||| ||||||| | | ||||||||| ||  ||||||||||||||    
T  27238425 aagagtggtcttagtatcatatttgagggtgtaaatctcgaacgattttctacagtgcagtagttaagcacgcagttgtagctggacttgttttatcttg 27238326  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
     |||||||||| |||||||| |||||| |||||||||| |||||||||| ||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  27238325 caggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 27238226  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagttt 243  Q
    |  ||||||||||| |   ||  |||||||||||||||||||||    
T  27238225 ccatagataatagagt---ttgaaaaatccaaatacaatagttt 27238185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 9650877 - 9651140
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtaga---tgagcttgttttatc 96  Q
    |||||||||||||||||||||||  | | ||||||| ||||||| |||||||||||||| |||| ||||| ||||||| ||    ||  |||||||||||    
T  9650877 aagagtggtcttagtaccatattaaaag-tgtaattctcgaacggttttctacagtgcagtagtcaaccgtacagttgcagcagctggacttgttttatc 9650975  T
Q  97 ttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaa 196  Q
     |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| ||||||||||    
T  9650976 ctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaa 9651075  T
Q  197 cttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatt 264  Q
    |||||||||| || |||||   || ||||| | |||||||| ||||||||||| ||||||||||||||    
T  9651076 cttcggtagaaaacagaat---ttggaaaaccaaaatacaacagtttgaaaatccaaaaacaacaatt 9651140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 8076226 - 8075975
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    ||||||||||||||||||||||| || |||||||| | |||||  |||||||||||    |||||| |||||||||| || ||||||||||||||| |||    
T  8076226 aagagtggtcttagtaccatatt-gaaggtgtaatct-cgaacagttttctacagt----agttaatcgcacagttgcagctgagcttgttttatcctgg 8076133  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    |||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||  |||| | ||||||||||||    
T  8076132 aggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacccagtaacaacttc 8076033  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
     ||||||||||||||   || ||||| | |||||||| |||||| |||| |||||||||||    
T  8076032 agtagataatagaat---ttggaaaaccaaaatacaacagtttggaaatccaaaaacaaca 8075975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 3357543 - 3357752
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgtttt-atctt 98  Q
    ||||||| |||||||||||||||| ||||||||| | | |||||||||||||||||||| | ||||||| |||| |||||| || | ||||||| ||| |    
T  3357543 aagagtgatcttagtaccatattttagggtgtaaatcttgaacgattttctacagtgcaatggttaaccacacaattgtagttgtgtttgtttttatcat 3357642  T
Q  99 ggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaact 198  Q
    |||| |||||||||||||||| |||||||||||| ||||||| || || ||||||||||||||  ||||||||||||||||  |||| ||||||||||||    
T  3357643 ggagacggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaact 3357742  T
Q  199 tcggtagata 208  Q
    ||||||||||    
T  3357743 tcggtagata 3357752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 25543275 - 25543475
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| |   ||||||||||| ||    
T  25543275 aagagtggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctagacttgttttatcctg 25543373  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    ||||||  ||||||||||||||  ||||||||||||| |||||| |||||||||||||||||  | |||||||| | |||  |||| |||||||||||||    
T  25543374 gaggcgatgtggttgatagtttatcttgcacaattttaggcagtaccacgaaacgtcttaaagagtgcgacctgattgtgactcaacctagtaacaactt 25543473  T
Q  200 cg 201  Q
    ||    
T  25543474 cg 25543475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 10388279 - 10388589
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||| |||||||| ||||||||||||||| | |||||| ||||| || |||||| ||||||| ||||||||||||| |||| |||||||||| ||    
T  10388279 aagagtggtattagtaccttatttgagggtgtaaatctcgaacaattttttagagtgcagtagttaatcgcacagttgtagttgagtttgttttatcctg 10388378  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||| |||||| || |  | |||||||  ||||||| |||||| ||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  10388379 gaggcggcgttgttgat-gtctatcatgcacaa-cttgggcaatgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 10388476  T
Q  200 cggtagataat-------agaat-gaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtct 291  Q
    ||||||||| |       | ||| ||||||| |||||||||||||| || ||||||||  ||||||||||| ||||||||||||| |   ||||||||||    
T  10388477 cggtagatattctttttcaaaatagaatttggaaatccaaatacaacagcttgaaaatctaaaaacaacaa-ttttaagacgttt-taactgttatgtct 10388574  T
Q  292 accgaagaagttact 306  Q
    | ||||||| |||||    
T  10388575 atcgaagaaattact 10388589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 12254261 - 12254054
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcat-agttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||| ||||||||||||||||||| ||||| | || |||| |||||||||  |||| |||||||||||||||||||| ||| ||||||||||| ||    
T  12254261 aagactggacttagtaccatatttgagg-tgtaaatctcaaacggttttctacacagcattagttaaccgcacagttgtagctgaacttgttttatcctg 12254163  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
     |||||||||| |||||||| |||||||||||| ||| ||||||||||| |||| |||||||  |||||||||||||| |  |||| || ||||||||||    
T  12254162 taggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatcttaaagagagcgacctggtcgcgactcaacctggtaacaactt 12254063  T
Q  200 cggtagata 208  Q
    || ||||||    
T  12254062 cgatagata 12254054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 29151044 - 29150913
Alignment:
Q  73 agttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    |||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||  |||||| ||    
T  29151044 agttgtagctgaacttattttatcttggaggcgacgtggttgatagtttgccttgcacaattttgagcagtgtcacgaaacgtcttaaaaagagcgatct 29150945  T
Q  173 ggtcgtgtatcaatctagtaacaacttcggta 204  Q
    |||||||  |||| ||||||||||||||||||    
T  29150944 ggtcgtgactcaacctagtaacaacttcggta 29150913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12799593 - 12799455
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||| ||||||||||||||||||||| ||  ||| ||||||| ||    
T  12799593 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctgcaatgcagtagttaaccgcacagttgtagctggacttattttatcctg 12799494  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgg 138  Q
    || | ||||||||||||||| ||||||||||||||||||    
T  12799493 gatgtggcgtggttgatagtctgccttgcacaattttgg 12799455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 105 - 258
Target Start/End: Original strand, 42627214 - 42627364
Alignment:
Q  105 ggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatct-agtaacaacttcggt 203  Q
    ||||||||||||||| ||| |||||||||||||||  ||||||||||||||||||||  |||||||||||||||| ||||| || |||||||||||||||    
T  42627214 ggcgtggttgatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacctggtcgtgaatcaacctaagtaacaacttcggt 42627313  T
Q  204 agataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaaca 258  Q
    ||||||||    ||||||| |||| ||||||||| |||||| |||||||||||||    
T  42627314 agataata----gaatttggaaattcaaatacaacagtttggaaattcaaaaaca 42627364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 21671377 - 21671066
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| || ||||||| |||| | ||| | ||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||  ||    
T  21671377 aagaatggtctttgtcccatattggaggtt-taaatctcgaacgattttctacactgcagtagttaaccgcacagttgtaggtgagcttgttttattctg 21671279  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    || |||  || |||||| || |||||||||||| ||||||||||||||| |||| |||||||  ||| | ||| ||||||  |||| |||||||||||||    
T  21671278 gatgcgaagttgttgattgtctgccttgcacaactttgggcagtgccactaaacttcttaaagagagggtcctagtcgtgactcaacctagtaacaactt 21671179  T
Q  200 cggtagataat-------agaat-gaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtct 291  Q
    | | ||||| |       | ||| ||||||| ||||||||||| ||| ||||| |||| |||||||||||| ||||||||||||||    || |||||||    
T  21671178 cagcagatattctatttcaaaatagaatttggaaatccaaataaaattgtttggaaatccaaaaacaacaa-ttttaagacgtttc-gactgctatgtct 21671081  T
Q  292 accgaagaagttact 306  Q
    ||||||||| |||||    
T  21671080 accgaagaaattact 21671066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 30258283 - 30258163
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||| ||  ||||||||||| ||    
T  30258283 aagagtggtcttagtaccatatttgaaggtgtaaatttcgaacaattttctacagtgcagtagttaaccgcactgttgtagctggacttgttttatcctg 30258184  T
Q  100 gaggcggcgtggttgatagtt 120  Q
    ||||||||||| |||||||||    
T  30258183 gaggcggcgtgattgatagtt 30258163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 3880178 - 3879922
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||| || ||||||||  | ||   ||||||| ||    
T  3880178 aagagtggtcttagtatcatatttgagagtgtaattctcgaacgattttctacagtgcagtagttaaccacatagttgtagtggggc---ttttatcctg 3880082  T
Q  100 gaggcggcgtggttgatagtttgccttgcac-aattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatc-aatctagtaacaac 197  Q
    |||||||||||||||||||| | |||| ||| |||||||  ||||| ||| ||||||||||||   || |||||| |||||  || || ||||||||||     
T  3880081 gaggcggcgtggttgatagtcttccttacacaaattttgaacagtgtcacaaaacgtcttaaagaaagtgacctgatcgtgactcaaacctagtaacaaa 3879982  T
Q  198 ttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||||| || ||||    ||||||| ||||| |||||||| | ||| ||||| ||| |||||||    
T  3879981 ttcggtggaaaata----gaatttggaaatcaaaatacaacaatttaaaaatccaagaacaaca 3879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 9008345 - 9008142
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| | |||||| |||||| || ||||||||| |||||||||||||||||||||| ||||||| | ||||||||||| ||  ||||||||||| ||    
T  9008345 aagagtgattttagtatcatatt-gaaggtgtaattctcgaacgattttctacagtgcagtagttaatcacacagttgtagttggacttgttttatcctg 9008247  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||  | || |||||||  ||||||||||||||||| | |||| ||| ||||||||||||  ||| ||| ||||||||  |||| |||||||||||||    
T  9008246 gaggcttcatgattgatagcctgccttgcacaattttgagtagtgtcactaaacgtcttaaagagagggacatggtcgtgactcaacctagtaacaactt 9008147  T
Q  200 cggta 204  Q
     ||||    
T  9008146 tggta 9008142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 6590911 - 6591054
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttga 115  Q
    |||||||||||||||||||| || |||||||||||||| || | ||||||| | ||||||| ||  ||| ||||||||||| || |||||||||||||||    
T  6590911 ccatatttgagggtgtaattctcaaacgattttctacaatgtagtagttaatcacacagttataactgaacttgttttatcctgaaggcggcgtggttga 6591010  T
Q  116 tagtttgccttgcacaattttgggcagtgccacgaaacgtctta 159  Q
    |||| |||||||||||||||| | ||||||||| ||||||||||    
T  6591011 tagtctgccttgcacaattttagacagtgccacaaaacgtctta 6591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 30256922 - 30256776
Alignment:
Q  115 atagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaa 214  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||   ||||| |||||||||  |||| || |||| |||||||||||||||||       
T  30256922 atagtctgctttgcacaattttgggcagtgccacgaaatgtcttaaaaacagcgatctggtcgtgactcaaccttgtaaaaacttcggtagataata--- 30256826  T
Q  215 tgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaattt 265  Q
     ||||||| ||||||||||||||||||||  |||| |||||||||||||||    
T  30256825 -gaatttgcaaatccaaatacaatagtttataaatccaaaaacaacaattt 30256776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 42626503 - 42626616
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||| ||  ||| ||||||| ||    
T  42626503 aagagtgatcttagtaccatatttgagggtgtaattctcgaacgattttctacagtgcagtaattaaccgcacagttgtagctggacttattttatcctg 42626602  T
Q  100 gaggcggcgtggtt 113  Q
    | |||||| |||||    
T  42626603 gcggcggcatggtt 42626616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 3284911 - 3284740
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgc-atagttaaccgcacagttgtagatgagcttg-ttttatctt 98  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| |||||||  ||||  ||||||||||||| ||||||| |||| ||| ||||||| |    
T  3284911 aagagtggtctcagtaccatatttgagggtgtaattctcgaacggttttctattgtgcggtagttaaccgcacggttgtagctgagtttgtttttatcat 3284812  T
Q  99 ggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgac 170  Q
    | || ||| |||||||||||| || ||||||||| ||||  ||||  |||||||| |||||||  |||||||    
T  3284811 gaagacggtgtggttgatagtctgtcttgcacaagtttgaacagtagcacgaaacatcttaaagagagcgac 3284740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 13142813 - 13142973
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| |||||||||||||||| | ||||||| | ||||||  ||||||| |||||| |||||| ||  |||||||||| ||| ||||||||||| ||    
T  13142813 aagagtgatcttagtaccatatttaacggtgtaaatctcgaacagttttctatagtgcaatagttagccttacagttgtagctgaacttgttttatcctg 13142912  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaa 160  Q
    | |||||||| ||||| ||| || | ||||||| ||||   ||||||||||||||||||||    
T  13142913 gtggcggcgttgttgaaagtctgtcatgcacaactttgactagtgccacgaaacgtcttaa 13142973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 208
Target Start/End: Complemental strand, 15642371 - 15642209
Alignment:
Q  47 tttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgc 145  Q
    |||||| |||||| ||||||||||  | ||||||| ||||| |||||| || |||||||| ||| |||||||||||| ||| |||||||||||  ||||     
T  15642371 tttctatagtgcagtagttaaccgtgccgttgtagctgagcctgttttgtcctggaggcgacgtagttgatagtttgtcttccacaattttggatagtgt 15642272  T
Q  146 cacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagata 208  Q
    || |||||||||||||  |||||||||| |||||   ||||   |||||||||||||||||||    
T  15642271 catgaaacgtcttaaaaagagcgacctgatcgtgacacaattctgtaacaacttcggtagata 15642209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 26287058 - 26287176
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| |||||   ||||||||||||||| |||||| |||||||| |||||||||||| ||   |||||||||| ||    
T  26287058 aagaatggtcttggtaccatattggagg-tgtaaagctcgaacgattttctatagtgcagtagttaactgcacagttgtagctggatttgttttatcctg 26287156  T
Q  100 gaggcggcgtggttgatagt 119  Q
    ||||||||||||||||||||    
T  26287157 gaggcggcgtggttgatagt 26287176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 16372560 - 16372381
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttga 115  Q
    |||||||||| ||| ||||| || ||||||||||||||||| | ||||||| |||| ||| ||||  |  |||||||||||||||||||| |||   |||    
T  16372560 ccatatttgatggtttaattctcaaacgattttctacagtgaagtagttaatcgcatagt-gtagtcgcacttgttttatcttggaggcgacgt---tga 16372465  T
Q  116 tagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    |||| || ||||||| || ||||  ||||||||||||| |||||||  ||||||| ||||||||  |||| ||||||||||||||    
T  16372464 tagtctgtcttgcacgatcttggt-agtgccacgaaacatcttaaagagagcgacttggtcgtgactcaacctagtaacaacttc 16372381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 3045738 - 3045587
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||         ||||| ||| || |||||||||||||| | ||    
T  3045738 aagagcggtcttagtaccatatttgagggtgtaaatctcgaacgattttctacagtgca---------gcacacttgcagttgagcttgttttatatcgg 3045648  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||   ||||||||||||| |||||| || || ||| | ||||||||| ||  ||||||||    
T  3045647 aggtaacgtggttgatagtctgccttacaaaactttagacagtgccacaaattgtcttaaa 3045587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 161
Target Start/End: Original strand, 45748595 - 45748716
Alignment:
Q  42 acgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgtttt-atcttggaggcggcgtggttgatagtttgccttgcacaattttggg 139  Q
    |||||||||||||||||| ||||||| |||| |||||||| ||| |||||||| || ||| | ||  |||||||||| ||||| ||||||||||||| |     
T  45748595 acgattttctacagtgcagtagttaatcgcatagttgtagttgaacttgtttttatattgtaagcaacgtggttgattgtttggcttgcacaattttaga 45748694  T
Q  140 cagtgccacgaaacgtcttaaa 161  Q
    ||||| ||| ||| || |||||    
T  45748695 cagtgtcacaaaaggttttaaa 45748716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 17495498 - 17495408
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||||||||| ||||| ||||| |||| | ||||||||||  || || |||||| ||||||||||||||   |||||||||||||||    
T  17495498 tgttttatcttggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtg 17495408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 17557716 - 17557806
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||||||||| ||||| ||||| |||| | ||||||||||  || || |||||| ||||||||||||||   |||||||||||||||    
T  17557716 tgttttatcttggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtg 17557806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 24528449 - 24528359
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||||||  ||||| | |||| | ||||||||||||  ||||||||||||||||    
T  24528449 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtg 24528359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 33238097 - 33238007
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  33238097 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 33238007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 47999070 - 47998980
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  47999070 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 47998980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 25832648 - 25832708
Alignment:
Q  101 aggcggcgtggttgatagtttgccttgcacaatttt-gggcagtgccacgaaacgtcttaaa 161  Q
    ||||| |||| |||||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  25832648 aggcgtcgtgattgatagtttgc-ttgcataatttttgggcagtgccacgaaacgtcttaaa 25832708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 29478191 - 29478224
Alignment:
Q  125 ttgcacaattttgggcagtgccacgaaacgtctt 158  Q
    ||||||||||||||||||||||||||||||||||    
T  29478191 ttgcacaattttgggcagtgccacgaaacgtctt 29478224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 9973558 - 9973467
Alignment:
Q  87 ttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    |||||||||| ||||| ||||||||||| | || | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  9973558 ttgttttatcctggagacggcgtggttgttcgtctaccttgcacaactt-ggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 9973467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 28292506 - 28292592
Alignment:
Q  91 tttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    |||||| ||||| ||||||||||| |||| | ||||||||||  ||||  |||||| ||||||||||||||  ||||||||||||||||    
T  28292506 tttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtg 28292592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 1289334 - 1289416
Alignment:
Q  89 gttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    ||||||||||| |||||  |||||||||||| ||| ||||| ||||||| | |||| ||| ||||||||||||  |||||||||    
T  1289334 gttttatcttgaaggcgttgtggttgatagtctgc-ttgcataattttgagtagtgtcacaaaacgtcttaaagagagcgacct 1289416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 2234630 - 2234720
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| ||| || |||||| ||||||||||||||   ||| |||||||||||    
T  2234630 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcaacctggtcgtg 2234720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 16539412 - 16539502
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  16539412 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 16539502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 16626250 - 16626160
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  16626250 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 16626160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 32212654 - 32212744
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| | ||| ||||| |||| | ||||||||||||| ||  |||||| ||||||||||||||   |||||||||||||||    
T  32212654 tgttttatcctggagacagcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 32212744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 33226509 - 33226419
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||| | ||||||||||| |||| | ||||||| || || ||  |||||| ||||||||||||||  ||||||||||||||||    
T  33226509 tgttttatcctggtgacggcgtggttgttagtctaccttgcataacttaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 33226419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 33243274 - 33243184
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||| ||||||||||||    
T  33243274 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagtgacctggtcgtg 33243184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 42572040 - 42571950
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  42572040 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 42571950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 43892953 - 43892863
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| || ||  ||||||  |||||||||||||   |||||||||||||||    
T  43892953 tgttttatcctggagacggcgcggttgctagtttaccttgcacaacttaggt-agtgccgtgaaacgtcttaaagaaagcgacctggtcgtg 43892863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 47993895 - 47993809
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggt 175  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||    
T  47993895 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggt 47993809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40865266 - 40865312
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt-tcgaacgat 46  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||||    
T  40865266 aagagtggtcttagtaccatattagagggtgttatttctcgaacgat 40865312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 6898376 - 6898428
Alignment:
Q  108 gtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||||||||||| ||| |||||||||||||| ||||||||| |||| |||||||    
T  6898376 gtggttgatagtctgc-ttgcacaattttggacagtgccacaaaacatcttaaa 6898428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 21081039 - 21081131
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcaca-attttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||| | ||||| |||| | ||||||||| | ||| || |||||| ||||||||||||||   |||||||||||||||    
T  21081039 tgttttatcctggagacggtgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 21081131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 2e-86; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 16649525 - 16649825
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||| |||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||||| ||||||||||| ||  |||||||||||  |    
T  16649525 aagagtggtattagtaccatatttgagggtgtaattctcgaacagttttctacagtgcagtagttaaccacacagttgtagctggacttgttttatcccg 16649624  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |  ||||||||||||||| ||||||||| ||||||||||||  ||||||||||||||||  ||||  ||||||||||||    
T  16649625 gaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagagcgacctggtcgtgactcaacttagtaacaactt 16649723  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  16649724 cggtagataata----gaatttggaaattcaaatacaacagtttgaaaatccaaaaacaacaa-ttttaagacgtttctatatgctatgtctaccgaaga 16649818  T
Q  300 agttact 306  Q
    |||||||    
T  16649819 agttact 16649825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 26927634 - 26927893
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||||||  | |||||||||| || ||||||||||| ||     
T  26927634 aagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcagtagttaagtgtacagttgtagctgggcttgttttatttta 26927733  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||| | ||||||  |||| |||||||||||||    
T  26927734 gaggcggcgtggttgatagtctgccttgcacaattttgggcaatgccacgaaacgtcttaaagagagcgacttagtcgtgactcaacctagtaacaactt 26927833  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaat 263  Q
    ||||||||||||    |||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  26927834 cggtagataata----gaatttaaaaatccaaatacaacagtttgaaaatccaaaaacaacaat 26927893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 51041375 - 51041674
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| |||||||||||||||||  ||| || || |||||||||||||||||||||| || |||| || |||||||||| || |||||||||||||||    
T  51041375 aagagtgatcttagtaccatatttggaggtatagttctcgaacgattttctacagtgcagtaattaatcgaacagttgtagctgggcttgttttatcttg 51041474  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||  ||||  ||||||||||||    
T  51041475 gaggcggcgtggttgatagtctgccttgcacaa-tttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactcaacttagtaacaactt 51041572  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||||||||    ||||||| |||||||||||||  |||||| |||| |||||||||||| ||||||||||||||  | || ||||||||||||| |    
T  51041573 cggtagataata----gaatttggaaatccaaatacatcagtttggaaatccaaaaacaacaa-ttttaagacgtttcgatctgctatgtctaccgaaaa 51041667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 19798925 - 19799182
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||| |||||||||| ||||||| | ||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||| ||    
T  19798925 aagagtggtcttagtgccatatttgaaggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctgggcttgttttatcctg 19799024  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || |||||||||||||||  |||||||||||||||||||||  |||||| ||| |||||  |||| |||||||||||||    
T  19799025 gaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcgatctgatcgtgactcaacctagtaacaactt 19799124  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    || |||||||||    |||||||||||||||||||||| ||||||||||| |||||||||||    
T  19799125 cgatagataata----gaatttgaaaatccaaatacaacagtttgaaaatccaaaaacaaca 19799182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 3 - 266
Target Start/End: Original strand, 33301094 - 33301354
Alignment:
Q  3 gagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttgga 101  Q
    |||||||||||||||||||||||| ||||||||| ||||||  |||||||||||||| |||||||||||||||||||||||||  |||||||||| ||||    
T  33301094 gagtggtcttagtaccatatttgaaggtgtaattctcgaacagttttctacagtgcagtagttaaccgcacagttgtagatgaaattgttttatcctgga 33301193  T
Q  102 ggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcg 201  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  || |||||||||||||  |||| ||||||||||||| |    
T  33301194 ggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgattcaagctagtaacaactttg 33301293  T
Q  202 gtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttt 266  Q
     |||||||||    ||||||| |||||||||||||| || ||| |||| ||||||||||| ||||    
T  33301294 atagataata----gaatttggaaatccaaatacaacagattggaaatccaaaaacaacactttt 33301354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 40166163 - 40165901
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| ||  |||||| ||||||||| |||||||||||||| ||||||| || | |||||||| || |||||||||||| |     
T  40166163 aagagtggtcttagtaccatattcgaatgtgtaaatttcgaacggttttctacagtgcagtagttaatcgtatagttgtagttgtgcttgttttatccta 40166064  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||  |||| |||||||||||||    
T  40166063 gaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactcaacctagtaacaactt 40165964  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttt 266  Q
    ||||||||||||    |||| ||  ||||||||||||| |||||||||||  |||||||||||||||    
T  40165963 cggtagataata----gaatatggtaatccaaatacaacagtttgaaaatctaaaaacaacaatttt 40165901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 3 - 261
Target Start/End: Complemental strand, 10135637 - 10135382
Alignment:
Q  3 gagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttgga 101  Q
    |||||||| |||| |||||||||||||||||||| | ||||| |||||||||||||| |||||||||||||||||| |  || |||||||||||| | ||    
T  10135637 gagtggtcgtagtgccatatttgagggtgtaattcttgaacggttttctacagtgcagtagttaaccgcacagttgcaactgggcttgttttatcctaga 10135538  T
Q  102 ggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcg 201  Q
    ||||||||||||||| || |||||||||||||||| || |||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||||    
T  10135537 ggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 10135438  T
Q  202 gtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||||||||||||     ||| |||||||||||||  |||||| |||| |||||||||||    
T  10135437 gtagataatagaac----ttggaaatccaaatacaggagtttggaaatacaaaaacaaca 10135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 23192731 - 23192987
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| ||||||| ||||||| |||||||||||||| ||||||| || ||| |||||| || |||||||||||| ||    
T  23192731 aagaatggtcttggtaccatattggagg-tgtaattctcgaacggttttctacagtgcagtagttaatcgaacaattgtagctg-gcttgttttatcctg 23192828  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  23192829 gaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 23192928  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    ||||||||||||    ||||||| ||| ||||| |||| ||||||||||| ||||||||||||    
T  23192929 cggtagataata----gaatttggaaaaccaaacacaacagtttgaaaatccaaaaacaacaa 23192987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 10140279 - 10139974
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttc-------tacagtgca-tagttaaccgcacagttgtagatgagcttgttt 92  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| |||||       ||||||||| |||||||||||||||||| || || ||||||||    
T  10140279 aagaatggtcttagtaccatatttgagggtgtaattctcgaacggttttcggttttctacagtgcagtagttaaccgcacagttgcagctgggcttgttt 10140180  T
Q  93 tatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagta 192  Q
    |||| | |||| |||||||||||| || ||||||||||||||||| | ||||||||||||||| |||||  |||||||||| |||||  |||| ||||||    
T  10140179 tatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctgatcgtgactcaacctagta 10140080  T
Q  193 acaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtcta 292  Q
    |||||||||||||||||||    ||  ||||||||||||||||| |||||||  ||| |||||||||||| ||||||||||||||  | |  ||||||||    
T  10140079 acaacttcggtagataata----gatcttgaaaatccaaatacagtagtttgggaatacaaaaacaacaa-ttttaagacgtttcgatctactatgtcta 10139985  T
Q  293 ccgaagaagtt 303  Q
    |||||||||||    
T  10139984 ccgaagaagtt 10139974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 11 - 266
Target Start/End: Original strand, 47451147 - 47451399
Alignment:
Q  11 ttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgt 109  Q
    |||||||||||||||  ||||||||| ||||||| |||||| |||| || ||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  47451147 ttagtaccatatttggaggtgtaattctcgaacggttttctgcagtacagtagttaatcgaacagttgtagttgagcttgttttatcttggaggcggcgt 47451246  T
Q  110 ggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataa 209  Q
    |||||||||| || ||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||  |||| ||||||| || |||||| |||||    
T  47451247 ggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaataatttcggtggataa 47451346  T
Q  210 tagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttt 266  Q
    ||    ||||||| ||||||||||||||  ||||| |||| ||||||||||||||||    
T  47451347 ta----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaatttt 47451399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 38620875 - 38620624
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||| |||||||||| ||||||||| | || |||  ||||||||| |||| ||||||||||||||||||||| ||  ||||||||||||||    
T  38620875 aagagtggtcttaataccatattttagggtgtaaatctcaaacagttttctacaatgcagtagttaaccgcacagttgtagttggacttgttttatcttg 38620776  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||| ||||||||| |||||||||||||||||| || || ||||||||||||||||  ||| || ||||||| |  |||| ||| ||| |||||    
T  38620775 gaggcggcgtagttgatagtctgccttgcacaattttggacaatg-cacgaaacgtcttaaagagagtgatctggtcgcgactcaacctaataataactt 38620677  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaa 256  Q
    ||||||||||||     |||||| |||||||||||||| ||||||||||||||||||    
T  38620676 cggtagataata----aaatttggaaatccaaatacaacagtttgaaaattcaaaaa 38620624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 6 - 263
Target Start/End: Complemental strand, 16035784 - 16035526
Alignment:
Q  6 tggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggc 104  Q
    ||||||| |||||||||| |||| |||||| | |||| | ||||||| |||||| ||||||||| |||| |||||||||||||||||||||| |||||||    
T  16035784 tggtcttggtaccatattggagg-tgtaatct-cgaatggttttctaaagtgcagtagttaaccacacatttgtagatgagcttgttttatcctggaggc 16035687  T
Q  105 ggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggta 204  Q
    ||||||||||||| | || ||||||||| ||||| |||||||||||||||| |||||  | ||||||||||||||  |||| ||||||||||||| ||||    
T  16035686 ggcgtggttgataatctgtcttgcacaactttggacagtgccacgaaacgtgttaaagagggcgacctggtcgtgactcaacctagtaacaactttggta 16035587  T
Q  205 gataatagaat--gaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaat 263  Q
    |||| |    |  |||||||||||||||||||||| |||||| |||| |||||||||||||    
T  16035586 gatattcattttagaatttgaaaatccaaatacaacagtttggaaatccaaaaacaacaat 16035526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 25855229 - 25855053
Alignment:
Q  125 ttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaa 224  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||||||||||||||||||    ||||||| |    
T  25855229 ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataata----gaatttgga 25855134  T
Q  225 aatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaagaagttact 306  Q
    ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||  | || || |||||||| ||||||||||    
T  25855133 aatccaaatacaacagtttggaaattcaaaaacaacaa-ttttaagacgtttcaatctgctacgtctaccggagaagttact 25855053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 39588279 - 39588536
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| |||||| |||||||||||||  ||||||||| ||||||| ||||||||| |||| ||||||| || ||| ||||||||||||||| |||||| ||    
T  39588279 aagattggtctcagtaccatatttggaggtgtaattctcgaacggttttctacactgcagtagttaatcgaacaattgtagatgagcttgctttatcctg 39588378  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||  |||||||| |||||| || ||||||||||||||| ||||||||||||||||||||||  |||||||||| |||||  | || |||||||||| ||    
T  39588379 gagtaggcgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgacttaacctagtaacaattt 39588478  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||| |||||||     |||||| ||||||||||||||   |||| |||| |||||||||||    
T  39588479 cggtggataata----taatttggaaatccaaatacaactatttggaaatccaaaaacaaca 39588536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 8138118 - 8137969
Alignment:
Q  5 gtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggagg 103  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||    
T  8138118 gtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacattgcagtagttaaccgcacagttgtagctgagcttgttttatcctggagg 8138019  T
Q  104 cggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaac 153  Q
    ||   ||||||||||| |||||||||||| ||| |||| |||||||||||    
T  8138018 cgatatggttgatagtctgccttgcacaactttaggcaatgccacgaaac 8137969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 18784470 - 18784716
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||| ||||||||||||        | ||  ||||||||||  ||    
T  18784470 aagagtggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgca--------gctggacttgttttattctg 18784560  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||  |||||||||| |||||  |||| |||||||||||||    
T  18784561 gaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaa-agagcgacctgatcgtgactcaacctagtaacaactt 18784659  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaa 259  Q
    || |||| ||||||||   || ||||| | | |||||| |||||| |||| |||||||||    
T  18784660 cgctagaaaatagaat---ttagaaaaccaacatacaacagtttggaaatccaaaaacaa 18784716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 60 - 261
Target Start/End: Original strand, 47455358 - 47455555
Alignment:
Q  60 tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtctta 159  Q
    ||||||| || |||||||||| |  |||||||||||| |||||||||||||||||||| | || ||||||||||||||| || |||||||||||||||||    
T  47455358 tagttaatcgaacagttgtagctaggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacattgccacgaaacgtctta 47455457  T
Q  160 aattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaa 259  Q
    ||  ||||||||||||||||  |||| ||| ||||||||||||| |||||||    ||||||| ||||||||||||||  ||||| |||| |||||||||    
T  47455458 aagagagcgacctggtcgtgactcaacctaataacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 47455553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 110 - 267
Target Start/End: Complemental strand, 3094187 - 3094033
Alignment:
Q  110 ggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataa 209  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||  |||| |||||||||||||||||||||||    
T  3094187 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataa 3094088  T
Q  210 tagaatgaatttgaaaatccaaatacaatagtttgaaaattc-aaaaacaacaattttt 267  Q
    ||    ||||||| |||||||||||||| |||||| |||| | ||||||||||||||||    
T  3094087 ta----gaatttggaaatccaaatacaacagtttggaaatccaaaaaacaacaattttt 3094033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 25843939 - 25843820
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||  ||    
T  25843939 aagagtggtcttagtaccatatatgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctgggcttgttttatactg 25843840  T
Q  100 gaggcggcgtggttgatagt 119  Q
    ||||||||||||||||||||    
T  25843839 gaggcggcgtggttgatagt 25843820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 208
Target Start/End: Complemental strand, 12260119 - 12259971
Alignment:
Q  60 tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtctta 159  Q
    |||||||||||| ||||||| ||| | |||||||||| |  || |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  12260119 tagttaaccgcatagttgtacatgtgtttgttttatcctaaagacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaacgtctta 12260020  T
Q  160 aattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagata 208  Q
    ||  ||||||| ||||||||| |||| | |||||||||||| |||||||    
T  12260019 aagagagcgacatggtcgtgtctcaaccaagtaacaacttcagtagata 12259971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 11806542 - 11806334
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| ||||||| ||||||||||  |||||| | || ||||||||||| || |||| || ||||||||||| |||||| ||| ||| ||||||  ||    
T  11806542 aagagtgatcttagtgccatatttgaaagtgtaaatctcaaacgattttctgcactgcagtatttaaccgcacaattgtagttgaacttcttttattctg 11806443  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
     ||||||||||||||||||| ||||||| || | |||| |||||| |||||||| |||||||  |||||| ||||| |||  |||| ||| |||||||||    
T  11806442 aaggcggcgtggttgatagtctgccttgtaccactttgcgcagtgtcacgaaacatcttaaagagagcgatctggttgtgactcaacctaataacaactt 11806343  T
Q  200 cggtagata 208  Q
    || ||||||    
T  11806342 cgatagata 11806334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 16833666 - 16833523
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| ||||||| |||||||||| |||| ||||||||||||||| ||||||||| |||| ||||||| || |||||||||| ||||  ||||||||| ||    
T  16833666 aagaatggtcttggtaccatattggagg-tgtaattttcgaacggttttctacaatgcagtagttaatcgaacagttgtagctgaggctgttttatcctg 16833568  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtg 144  Q
    || | |||| ||||||||||||| |||||| ||||||||||||||    
T  16833567 gatgtggcgaggttgatagtttgtcttgcataattttgggcagtg 16833523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 2493817 - 2493901
Alignment:
Q  87 ttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    |||||||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||    
T  2493817 ttgttttatcctgggggcgccgtggttgatagtttgc-ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacct 2493901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 12906248 - 12906166
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    ||||||||| ||| |||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||    
T  12906248 tgttttatcctgg-ggcgtcgtggttgatagtctgc-ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacct 12906166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 208
Target Start/End: Complemental strand, 8900351 - 8900229
Alignment:
Q  86 cttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaa 185  Q
    ||||||||||| ||||||||| ||| |||||||| ||  |||||||| ||| | ||||| ||| |||||| |||||  ||||||  ||||||||  ||||    
T  8900351 cttgttttatcctggaggcggtgtgattgatagtatgttttgcacaactttagacagtgtcacaaaacgttttaaagagagcgatatggtcgtgactcaa 8900252  T
Q  186 tctagtaacaacttcggtagata 208  Q
     ||||||||||||||||||||||    
T  8900251 cctagtaacaacttcggtagata 8900229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 263
Target Start/End: Complemental strand, 16832144 - 16832025
Alignment:
Q  140 cagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaata 239  Q
    ||||| |||| |||||||||||  ||||||||||||||||  ||||| ||||||||||||  ||||||||||    ||||||| ||||||||||||||      
T  16832144 cagtgtcacggaacgtcttaaagagagcgacctggtcgtgactcaatatagtaacaacttaagtagataata----gaatttggaaatccaaatacaacg 16832049  T
Q  240 gtttgaaaattcaaaaacaacaat 263  Q
    ||||| |||| |||| ||||||||    
T  16832048 gtttggaaatccaaatacaacaat 16832025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 25843813 - 25843738
Alignment:
Q  182 tcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||| |||||||||||||||||||||||||||||    ||| |||||||||||||| |||||| ||||||||||||||||    
T  25843813 tcaacctagtaacaacttcggtagataatagaat----ttggaaatccaaatacaacagtttggaaattcaaaaacaaca 25843738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 33380905 - 33381004
Alignment:
Q  71 acagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgac 170  Q
    |||||||||| || ||| |||||||||||| | || ||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||  |||||||    
T  33380905 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgagcagtgtcacgaaacgtcttaaagagagcgac 33381002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 10106199 - 10106108
Alignment:
Q  87 ttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    |||||||||| ||||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  10106199 ttgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 10106108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 5346773 - 5346685
Alignment:
Q  73 agttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||||||| ||| ||||||| ||||||||||||||||| |||||||| ||  ||| |||| ||||| ||||||||| |||||| |||||    
T  5346773 agttgtagctgaacttgtttcatcttggaggcggcgtgattgatagtctgtattgtacaaatttggacagtgccacaaaacgttttaaa 5346685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 36724803 - 36724720
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    ||||||||||||| |||| |||||||||| || ||| ||||||||||||||| |||||||  ||||||||||||  |||||||||    
T  36724803 tgttttatcttgggggcgtcgtggttgattgtctgc-ttgcacaattttgggtagtgccataaaacgtcttaaagagagcgacct 36724720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 38734370 - 38734280
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | |||||||||| |  ||| |||||| ||||||||||||||  ||||||||||||||||    
T  38734370 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacta-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 38734280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 23193211 - 23193306
Alignment:
Q  75 ttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    ||||||||||| |||||||||| ||| |||| ||||||||||||| || |||||| |||||||||  |||||| ||||||||||| |  |||||||||    
T  23193211 ttgtagatgag-ttgttttatcatgggggcgtcgtggttgatagtctg-cttgcataattttgggttgtgccatgaaacgtcttatagagagcgacct 23193306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 24159783 - 24159882
Alignment:
Q  71 acagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgac 170  Q
    |||||||||| |||||| |||||||| ||| | || ||| ||||||||| ||| |||||||||||||||||||   |||||||||||||||  |||||||    
T  24159783 acagttgtagctgagct-gttttatcctggggacgtcgtcgttgatagtctgc-ttgcacaattttgggcagtattacgaaacgtcttaaagagagcgac 24159880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 27761839 - 27761911
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    ||||||||| ||| | || ||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||    
T  27761839 tgttttatcctggggacgtcgtggttgatagtctgc-ttgcacaattttggacagtgccacgaaacgttttaaa 27761911  T

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Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3094270 - 3094191
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtag 80  Q
    |||| |||||||| ||||||||| || ||||||||| ||||||| |||||||||||||| ||||||| || ||||||||||    
T  3094270 aagattggtcttaataccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtag 3094191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 28434709 - 28434753
Alignment:
Q  216 gaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaac 260  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||    
T  28434709 gaatttgaaaattcaaatacaatagtttgaaaatccaaaaacaac 28434753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 5602425 - 5602515
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||||||||| ||||||||||| |||| | ||||||||||  | ||| |||||  ||||||||||||||  |||||| |||||||||    
T  5602425 tgttttatcttggagacggcgtggttgttagtctaccttgcacaa-ctagggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtg 5602515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 5725074 - 5724984
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| ||| || |||||| ||||||||||||||   |||||||||||||||    
T  5725074 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 5724984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8267743 - 8267802
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt-tcgaacgattttctacagtgca 59  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||||| | |||||||||    
T  8267743 aagagtggtcttagtaccatattagagggtgttatttctcgaacgattatttacagtgca 8267802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 13890908 - 13890818
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||| ||||||| |||| | |||||||||| || ||| |||||| | ||||||||||||  ||||||||||||||||    
T  13890908 tgttttatcctggagacggtgtggttgttagtctaccttgcacaactt-gggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtg 13890818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 36684715 - 36684805
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  36684715 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 36684805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 39747165 - 39747255
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| || |||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  |||| |||||||||||    
T  39747165 tgttttatcctggagacgacgtggttgctagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcaacctggtcgtg 39747255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 161
Target Start/End: Original strand, 28434495 - 28434646
Alignment:
Q  9 tcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggc 107  Q
    |||| |||||||||| |||| ||||| | ||||||| ||||||| |||  | |||||||| ||||| |||||| ||| ||||||||||| ||||| ||||    
T  28434495 tctttgtaccatattggagg-tgtaaatctcgaacggttttctatagtaaagtagttaactgcacaattgtagttgaacttgttttatcctggagacggc 28434593  T
Q  108 gtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
      |||||||||| ||   ||||||| ||| | ||||| || |||||||||||||    
T  28434594 aaggttgatagtctgtggtgcacaagttt-gacagtgtcatgaaacgtcttaaa 28434646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 31064032 - 31063968
Alignment:
Q  107 cgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    ||||||||||||||||| ||| ||||||||||  ||||||||||||| |||||||  |||||||||    
T  31064032 cgtggttgatagtttgc-ttgaacaattttggaaagtgccacgaaacctcttaaagagagcgacct 31063968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 3584696 - 3584606
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| ||| || ||| || ||||||||||||||   |||||||||||||||    
T  3584696 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtg 3584606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 11251113 - 11251203
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  11251113 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 11251203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 26651166 - 26651256
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||||||  ||||| |||||| | |||| |||||||  ||| ||||||||||||    
T  26651166 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcaaaacatcttaaagagagtgacctggtcgtg 26651256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 34318224 - 34318314
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| ||  || |||||| ||||||||||||||  ||||||| ||||||||    
T  34318224 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-ttcaggtagtgccgcgaaacgtcttaaagagagcgacttggtcgtg 34318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 37404416 - 37404506
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  37404416 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 37404506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 25661858 - 25661895
Alignment:
Q  124 cttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  25661858 cttgcacaattttgggtagtgccacaaaacgtcttaaa 25661895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 46696641 - 46696593
Alignment:
Q  216 gaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatt 264  Q
    ||||||| ||||| ||||| || ||||||||||| ||||||||||||||    
T  46696641 gaatttggaaatctaaataaaacagtttgaaaatccaaaaacaacaatt 46696593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 161; Significance: 8e-86; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 4257 - 4000
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||| || |||||||||| || |||||||||||| ||    
T  4257 aagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctg 4158  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||  |||| |||||||||||||    
T  4157 gaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 4058  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||||||||    ||||||| |||||||||||||| |||||| |||| |||||||||||    
T  4057 cggtagataata----gaatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 4000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 443858 - 444102
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgcatagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||||| | |    
T  443858 aagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctatagtgcatagttaaccgcacagttgtagctgggcttgttttatcct-g 443956  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    || |||||||||||||||| |||||||||||||||| ||||||||||||||||||           |||| | ||||||  |||| ||||||||||||||    
T  443957 agacggcgtggttgatagtctgccttgcacaatttt-ggcagtgccacgaaacgt-----------cgacttcgtcgtgattcaacctagtaacaacttc 444044  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaa 262  Q
    |||| ||||||    |||||||||||| ||||||||| ||||| ||||| ||||||||||||    
T  444045 ggtaaataata----gaatttgaaaatacaaatacaagagtttaaaaatccaaaaacaacaa 444102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 9800 - 10056
Alignment:
Q  2 agagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttgg 100  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||||| ||||||| || |||||||||| || |||||||||||| |||    
T  9800 agagtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctgg 9899  T
Q  101 aggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttc 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| ||||||||||||||    
T  9900 aggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 9999  T
Q  201 ggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    |||||||||||    ||||||| ||||||||||||||  ||||| |||| |||||||||||    
T  10000 ggtagataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 10056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 83248 - 82932
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    ||||||| ||||||||||||||| || ||||||||| ||||| | |||||||||||||| |||||||||||||||||| || ||||||||||||||| ||    
T  83248 aagagtgatcttagtaccatatt-gaaggtgtaattctcgaaaggttttctacagtgcagtagttaaccgcacagttgcagctgagcttgttttatcctg 83150  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||| ||||||||||| ||||||||| |||||||||  ||| ||||||||||||||||  ||||||||||||||||  |||| |||||||||||||    
T  83149 gaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 83050  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaatttttaagacgtttctttatgttatgtctaccgaaga 299  Q
    ||||||| || |||||   || ||||| | |||||||| |||||  |||| |||||||||||| |||||| |||||||    ||| ||||||||||||||    
T  83049 cggtagaaaacagaat---ttggaaaaccaaaatacaacagtttagaaatccaaaaacaacaa-ttttaaaacgtttcaaactgtcatgtctaccgaaga 82954  T
Q  300 agttac-tattaaagttcagtt 320  Q
    |||||| |||||| ||||||||    
T  82953 agttacttattaaggttcagtt 82932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 25582 - 25323
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||||||||||||||||||||||||| | ||||| | ||||||| |||||||||||| | ||||||||||||||||||||| || |||||||||||| ||    
T  25582 aagagtggtcttagtaccatatttgaagatgtaagtctcgaacggttttctacagtgtagtagttaaccgcacagttgtagttgggcttgttttatcctg 25483  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    || ||||||||||||||||| || |||||||||||||  |||||| |||| |||||||||||  ||| |||||  | |||  |||| |||||||||||||    
T  25482 gacgcggcgtggttgatagtctgtcttgcacaattttacgcagtgtcacgtaacgtcttaaagagagtgacctaattgtgactcaacctagtaacaactt 25383  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaacaat 263  Q
    || |||||||||    ||||||| |||||||||||||  ||||||||||| |||| ||||||||    
T  25382 cgatagataata----gaatttggaaatccaaatacagcagtttgaaaatccaaagacaacaat 25323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 29316 - 29218
Alignment:
Q  23 ttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtt 120  Q
    |||| ||||||||| ||||||| ||||||||| |||| ||||||||||||||||| ||| |   ||| ||||||| || || |||||||||||||||||    
T  29316 ttgaaggtgtaattctcgaacggttttctacaatgcagtagttaaccgcacagttatagttagacttattttatcctgaagacggcgtggttgatagtt 29218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 38 - 263
Target Start/End: Complemental strand, 35780 - 35558
Alignment:
Q  38 tcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaatttt 136  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  35780 tcgaacgattttctacagtgcagtagttaaccgcacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttt 35681  T
Q  137 gggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagataatagaatgaatttgaaaatccaaataca 236  Q
    || ||||| ||||||||||||||||  ||||| | |||||||   | || |||||||||||||| ||| ||||||    ||||||| |||||||||||||    
T  35680 ggccagtgtcacgaaacgtcttaaagagagcggcatggtcgtaacttaacctagtaacaacttcagtaaataata----gaatttggaaatccaaataca 35585  T
Q  237 atagtttgaaaattcaaaaacaacaat 263  Q
    | ||||||||||| |||||| ||||||    
T  35584 acagtttgaaaatgcaaaaataacaat 35558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 165999 - 166256
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttg 99  Q
    |||| |||||||||||||||| |  ||| ||||||| ||||||| |||| ||||||||| || ||||||||||||||| || || |||||||||||| ||    
T  165999 aagattggtcttagtaccatagtaaagg-tgtaattctcgaacggttttttacagtgcagtaattaaccgcacagttgcagctgggcttgttttatcctg 166097  T
Q  100 gaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaactt 199  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||  |||||||||||| |||  |||| |||||| ||| ||    
T  166098 gaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactcaacctagtatcaattt 166197  T
Q  200 cggtagataatagaatgaatttgaaaatccaaatacaatagtttgaaaattcaaaaacaaca 261  Q
    ||||||| || |||||   || ||||| | |||||||| |||||| |||| |||||||||||    
T  166198 cggtagaaaacagaat---ttggaaaaccaaaatacaacagtttggaaatccaaaaacaaca 166256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 255983 - 255792
Alignment:
Q  18 catatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgat 116  Q
    ||||||||||||||||||  ||||||| |||||||||||||| ||||||||| ||||||||||| ||  ||||||||||| |||||||||| | ||||||    
T  255983 catatttgagggtgtaatcctcgaacggttttctacagtgcagtagttaaccacacagttgtagctggacttgttttatcctggaggcggcatagttgat 255884  T
Q  117 agtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagata 208  Q
    ||| || |||||||||||||||| ||||||||||||| |||||||  ||| ||||||||||||| | ||  ||||||||| || ||||||||    
T  255883 agtatgtcttgcacaattttgggtagtgccacgaaacctcttaaagagagtgacctggtcgtgtcttaacatagtaacaaatttggtagata 255792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 560 - 343
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgc------acagttgtagatgagcttgtttt 93  Q
    |||||||||||||||||| ||||||||||||||| | || |||| |||||||||||||| |||||||||||      |||||||||| ||||||||||||    
T  560 aagagtggtcttagtaccgtatttgagggtgtaaatctcaaacggttttctacagtgcagtagttaaccgcgcgcgcacagttgtagctgagcttgtttt 461  T
Q  94 atcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagta- 192  Q
    ||| |||||||| ||||||||||||| || ||||||||| ||||| || ||||| |||||||||||||   |||||| | ||||||  |||| ||||||     
T  460 atcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgacatagtcgtgactcaacctagtaa 361  T
Q  193 --acaacttcggtagata 208  Q
      ||||||||||||||||    
T  360 ttacaacttcggtagata 343  T

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Target: scaffold0009 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 164935 - 165152
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgc------acagttgtagatgagcttgtttt 93  Q
    |||||||||||||||||| ||||||||||||||| | || |||| |||||||||||||| |||||||||||      |||||||||| ||||||||||||    
T  164935 aagagtggtcttagtaccgtatttgagggtgtaaatctcaaacggttttctacagtgcagtagttaaccgcgcgcgcacagttgtagctgagcttgtttt 165034  T
Q  94 atcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagta- 192  Q
    ||| |||||||| ||||||||||||| || ||||||||| ||||| || ||||| |||||||||||||   |||||| | ||||||  |||| ||||||     
T  165035 atcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgacatagtcgtgactcaacctagtaa 165134  T
Q  193 --acaacttcggtagata 208  Q
      ||||||||||||||||    
T  165135 ttacaacttcggtagata 165152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 13451 - 13294
Alignment:
Q  4 agtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggag 102  Q
    |||||||||||||||||||| |||| ||||| || ||||| ||||||||||||| | ||||||||||||||||||||| ||| |||||| ||||||||||    
T  13451 agtggtcttagtaccatattagagg-tgtaaattgcgaaccattttctacagtgaagtagttaaccgcacagttgtagttgaacttgttgtatcttggag 13353  T
Q  103 gcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    ||  | ||||||||||| | ||||| |||||||||||||||| ||| ||||||||||||    
T  13352 gcaccatggttgatagtctaccttgaacaattttgggcagtgtcaccaaacgtcttaaa 13294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 1309 - 1151
Alignment:
Q  14 gtaccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggt 112  Q
    |||||||||| || ||||||| | ||||||||||||||| |||||| |||||||||||||||| |||| ||| ||||||||  | ||||||| |||||||    
T  1309 gtaccatatt-gaaggtgtaaatctcgaacgattttctatagtgcagtagttaaccgcacagtcgtagctgaacttgtttttgcctggaggcagcgtggt 1211  T
Q  113 tgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    | |||||  |||||||| ||||||| ||| || |||  |||||||||||| |||| ||||    
T  1210 ttatagtccgccttgcataattttgtgcaatgtcacagaacgtcttaaatagagcaacct 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 4089 - 3966
Alignment:
Q  85 gcttgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatca 184  Q
    |||||||||||| ||||||||||||||||||| || || |||||| || ||| |||| |||||  ||| ||||||||  ||||||  ||||||||  |||    
T  4089 gcttgttttatcctggaggcggcgtggttgatggtatgtcttgcaaaaattttggcattgccataaaaagtcttaaagagagcgatatggtcgtgactca 3990  T
Q  185 atctagtaacaacttcggtagata 208  Q
    | ||||||||||||||||||||||    
T  3989 acctagtaacaacttcggtagata 3966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4156 - 4098
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca 59  Q
    |||||||||||||||||||||||| ||||| ||| | ||||| | ||||||||| ||||    
T  4156 aagagtggtcttagtaccatatttaagggtataaatctcgaatggttttctacaatgca 4098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 201
Target Start/End: Complemental strand, 2474 - 2291
Alignment:
Q  18 catatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttgat 116  Q
    ||||||| ||||||||||| || ||| ||||||||| ||||| ||||||| | ||||||||||  |||| |||||||||  | |||||||||||||||||    
T  2474 catatttaagggtgtaattctccaacaattttctacggtgcagtagttaatctcacagttgtacctgagtttgttttatactagaggcggcgtggttgat 2375  T
Q  117 agtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcg 201  Q
    | | || |||||||||||||   || || ||| |||||| |||||  || ||||||| || ||  |||| ||| |||||||||||    
T  2374 a-tctgtcttgcacaattttaaacaatggcacaaaacgtattaaagagaacgacctgatcatgactcaacctaataacaacttcg 2291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 15355 - 15259
Alignment:
Q  112 ttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtgtatcaatctagtaacaacttcggtagata 208  Q
    |||||||| || |||||||||||||| ||||||| ||||||| |||||||  ||| ||  ||||||||  |||| ||||||||||||||||||||||    
T  15355 ttgatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggtcgtgactcaacctagtaacaacttcggtagata 15259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 5e-16; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 1660 - 1570
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | |||||||||| || ||| |||||| ||||||||||||||  ||||||||||||||||    
T  1660 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 1570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 7141 - 7052
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgt 178  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||||||  ||||| |||||| ||||||||||||||  || ||||||||||||    
T  7141 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagaacgacctggtcgt 7052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 155490 - 155544
Alignment:
Q  60 tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttg 114  Q
    ||||||| ||||||||||||| ||| ||||||||||| | |||||||||||||||    
T  155490 tagttaatcgcacagttgtagctgaacttgttttatcctagaggcggcgtggttg 155544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 146362 - 146404
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca 59  Q
    ||||||||||| |||||||| |||||| |||||||||||||||    
T  146362 ccatatttgagagtgtaattctcgaacaattttctacagtgca 146404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 171734 - 171798
Alignment:
Q  107 cgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacct 172  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||  |||||||||    
T  171734 cgtggttgatagtctgc-ttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacct 171798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 2772 - 2862
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||||||  ||||| |||| ||||||||||||||||  | ||||||||||||||    
T  2772 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtg 2862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 10732 - 10822
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||||||||| |||| | ||||||||||  ||||| |||| ||||||||||||||||  | ||||||||||||||    
T  10732 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtg 10822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 37105 - 37015
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| ||| || |||||| ||||||||||||||   |||||||||||||||    
T  37105 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 37015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47770 - 47816
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt-tcgaacgat 46  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||||    
T  47770 aagagtggtcttagtaccatattagagggtgttatttctcgaacgat 47816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52813 - 52859
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt-tcgaacgat 46  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||||    
T  52813 aagagtggtcttagtaccatattagagggtgttatttctcgaacgat 52859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 3153 - 3063
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  3153 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 3063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 81382 - 81472
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | ||||||||||||  ||  |||||| ||||||||||||||  ||||||||||||||||    
T  81382 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtg 81472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5473 - 5415
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattttcgaacgattttctacagtgca 59  Q
    |||||||||||||||||||||||||||||||||| | || |||  |||||||| |||||    
T  5473 aagagtggtcttagtaccatatttgagggtgtaaatctcaaacagttttctacggtgca 5415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45966 - 45920
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt-tcgaacgat 46  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||    
T  45966 aagagtggtcttagtaccatatttgagggtgttatttctcgaacgat 45920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 152821 - 152867
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt-tcgaacgat 46  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||    
T  152821 aagagtggtcttagtaccatatttgagggtgttatttctcgaacgat 152867  T

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Target: scaffold0594 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 9208 - 9298
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  9208 tgttttatcctggagacggcgcggttgctagtcttccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 9298  T

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Target: scaffold0166 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 13740 - 13830
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  13740 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 13830  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 31640 - 31550
Alignment:
Q  88 tgttttatcttggaggcggcgtggttgatagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaattgagcgacctggtcgtg 179  Q
    ||||||||| ||||| ||||| ||||| |||| | |||||||||| || ||  |||||| ||||||||||||||   |||||||||||||||    
T  31640 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 31550  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1139 - 1185
Alignment:
Q  1 aagagtggtcttagtaccatatttgagggtgtaattt-tcgaacgat 46  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||||    
T  1139 aagagtggtcttagtaccatattagagggtgttatttctcgaacgat 1185  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 9057 - 8912
Alignment:
Q  17 ccatatttgagggtgtaattttcgaacgattttctacagtgca-tagttaaccgcacagttgtagatgagcttgttttatcttggaggcggcgtggttga 115  Q
    |||||| ||||||||||||| | ||| |||||| |||| |||| ||||||| |||| ||||  || |   ||||||||||| || ||||| |||| ||||    
T  9057 ccatatatgagggtgtaattcttgaatgattttgtacaatgcagtagttaatcgcatagttacagctagacttgttttatcctgaaggcgacgtgattga 8958  T
Q  116 tagtttgccttgcacaattttgggcagtgccacgaaacgtcttaaa 161  Q
    |||| | |||| || ||||||| |  ||| ||||||| ||||||||    
T  8957 tagtcttccttacataattttgagttgtgtcacgaaatgtcttaaa 8912  T

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